Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0003422

Physical Location & Seq

Genomic Coordinates Reverse (-)

6624779 .. 6627853

Gene Structure 3075 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1055400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1752 bp

ATGGCTACCACCACCAGCCAAAGTACAGCACCCAGCAACAGCACCACCGCCGCCGCCATTTGCTTCTCCAAGTATCTTCATTCGCTGTCCCAAACACCCCACAGGCTTAGGAGGAGAATGCTTGCAACGTGGACCCCAGACGAAGAGCTGAACCAAGTGAGGCAAAGGTCAGGGGCAGACATGAAAAGGAAACTCAAGTGGTATGATCTTGTGGCCCTTGGCGTTGGAGGAATGCTTGGTGTTGGAGTCTTTGTCACAACTGGCCCTGTCGCCCGTCATACTGCTGGCCCTTCCGTGTTCATTTCCTATATCATTGCCGGAATATCAGCCCTACTTTCTTCCTTGTGTTACGCTGAATTTTCTGTCCAAATCCCAGTTGCCGGTGGTGCCTTTAGTTATCTCCGATTGACCTTCGGAGAATTTGTTGGTTACTTTGCCGGGGCTAATATACTCATGGAGTACGTATTGTCGAACGCGGCTGTTGCCAGAAGCTTTACAGAGTATTTATCCTCTGCATTTGGAGAAAATTCAAGGATATGGAGAGTAGAAGTGAATGGTTTGGTAAAGGGATATGATATGTTGGACTTCCCGGCTGTTGCTCTTATTCTTCTTCTCACTCTCTGCCTTTGCCATAGCACAAAGGAAAGCTCCCTCTTGAACCTAATTATGACAGTCTTCCATGTAGTTTTCTTTGGATTTATTATAATTGCTGGCTTCTGCAATGGGACTTCCAAAAACTTGGTGAAGCCTCAAGGAATTGCGCCTTATGGTGTTACAGGTGTTCTTGATGGGGCAGCTAGGGTTTACTTCAGCTATATCGGCTATGACTCGGCGTCAACCATGGCGGAAGAGATCCAAAACCCTTTGACGAGCTTGCCAGTTGGAATCATTGGTTCCGTTGTCATCACCTCTGTGCTCTATTGCCTCATGGCCTTGTCCTTGTGTTTGATGGTTCCTTACAACAAGATAACAGAGAATGTGGCATTTTCAAATGCATTCAAAGAGATTGGTTGGGAATGGGCAAGCAATGTGGTAGGGGCAGGTGCAAGCTTGGGGATTGTTGCTTCACTTTTAGTAGCAATGTTAGGTCAAGCACGGTACCTCTGTGTCATTGGAAGGGCCCGGCTTGTGCCCTCATGGTTAGCTAAGGTCCATCCGTCAACAGGCACTCCATTGAATGCCACCCTTTTCTTGGGACTTTGTACAGCATCAATTGCGCTCTTCACCGACCTCGAAATAGTGATTGATATGATCTCCATCGGCACGCTCTTGGTGTTCTACCTTGTGGCCAATGCTCTCGTTTACCGGCGATACGTGATCATCAGCAAAAACCCTCCATTTCAAACTCTCTTGTTCCTCTTCCTCCTATCGTCTAGTGCTATTGGCTTTTCCATGTCATTGAAGTTTAAGCGACAACGGTGGGGACTACCGCTTTTCGGGGTGTCTACGATCATCATCATTTCCTTCTTCAACTACGCAGTTCCTTGTGTTCGCCATCATATAGGGTGGTCAATGCCATTCATGCCATGGCCTGCTGCACTGTCCATCTTCCTTAATGTGTCCCTCATGACCACGCTGAAGAAGTTCTCGTTCGAACGGTTTGCGATATGGTCATGTTTCATAACATTGTTCTATATGTTGTATGGTGTTCACTCAACTTATCAGGCCGAGGAGATGGGGAGCAGTGACGATGAAGTGAATCCAAGCTCAGCTGTGCAGCAAACCAAGCTAGACAATATGCAAGTACTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0008150 GO:0008509 GO:0008514 GO:0009605 GO:0009607 GO:0009624 GO:0015075 GO:0015171 GO:0015318 GO:0015711 GO:0015849 GO:0016020 GO:0022857 GO:0034220 GO:0043207 GO:0044464 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0098656 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

584

Amino Acids

63.8

Weight (kDa)

8.83

Isoelectric Point (pI)

36.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	65 - 508	8.3e-49	Amino acid permease
AA_permease	PF00324	71 - 495	2e-27	Amino acid permease
AA_permease_C	PF13906	503 - 552	3e-09	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003422)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10600 AT3G10600 AT5G04770 AT5G04770 AT5G04770
fragaria_vesca	FvH4_5g20380 FvH4_5g20380 FvH4_7g05050
malus_domestica	MD02G1259000.v1.1 MD04G1055400.v1.1 MD06G1047000.v1.1
prunus_persica	Prupe.2G071100_v2.0.a1 Prupe.2G071100_v2.0.a1 Prupe.5G055200_v2.0.a1
pyrus_communis	pycom02g22020 pycom04g04840
rosa_chinensis	RchiOBHm_Chr1g0331741 RchiOBHm_Chr7g0205641
rosa_laevigata	RLG00000003368 RLG00000029718
rosa_multiflora	Rmu_sc0006124.1_g000001 Rmu_ssc0000089.1_g000013
rosa_roxburghii	Rroxscaffold_3G00252110 Rroxscaffold_4G00318820
rosa_rugosa	Rorug01G0095900 Rorug01G0096000 Rorug07G0092300 Rorug07G0092300
rosa_samantha	Rh1BG091400 Rh1DG125300 Rh7AG223200 Rh7BG218200 Rh7CG236500 Rh7DG230200
rosa_wichuraiana	Rw1G009690 Rw7G019250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	704
AarI	CACCTGC	1 cut(s)	1031
Acc36I	ACCTGC	1 cut(s)	1031
Acc65I	GGTACC	1 cut(s)	1098
AccB1I	GGYRCC	2 cut(s)	386, 1098
AccI	GTMKAC	1 cut(s)	1445
AccII	CGCG	1 cut(s)	476
AciI	CCGC	6 cut(s)	48, 51, 54, 476, 845, 1430
AclWI	GGATC	1 cut(s)	847
AcoI	YGGCCR	1 cut(s)	1287
AcsI	RAATTY	3 cut(s)	356, 419, 526
AcuI	CTGAAG	2 cut(s)	793, 1598
AcyI	GRCGYC	1 cut(s)	833
AfaI	GTAC	5 cut(s)	25, 461, 1100, 1204, 1746
AfiI	CCNNNNNNNGG	4 cut(s)	380, 1163, 1192, 1436
AgsI	TTSAA	8 cut(s)	531, 658, 990, 1000, 1177, 1343, 1402, 1471
AhdI	GACNNNNNGTC	1 cut(s)	832
AleI	CACNNNNGTG	1 cut(s)	911
Alw21I	GWGCWC	1 cut(s)	918
AlwI	GGATC	1 cut(s)	847
AoxI	GGCC	8 cut(s)	213, 262, 286, 930, 1119, 1287, 1529, 1665
ApaI	GGGCCC	1 cut(s)	1123
ApeKI	GCWGC	3 cut(s)	794, 1535, 1717
ApoI	RAATTY	3 cut(s)	356, 419, 526
Asp700I	GAANNNNTTC	1 cut(s)	1583
Asp718I	GGTACC	1 cut(s)	1098
AspLEI	GCGC	2 cut(s)	763, 1219
AspS9I	GGNCC	7 cut(s)	132, 214, 263, 287, 1119, 1120, 1150
AsuC2I	CCSGG	3 cut(s)	439, 590, 1123
AsuHPI	GGTGA	3 cut(s)	754, 898, 1216
AsuII	TTCGAA	1 cut(s)	1593
AvaII	GGWCC	2 cut(s)	132, 1150
BaeGI	GKGCMC	2 cut(s)	1123, 1134
BaeI	ACNNNNGTAYC	2 cut(s)	1090, 1123
BalI	TGGCCA	1 cut(s)	1289
BanI	GGYRCC	2 cut(s)	386, 1098
BanII	GRGCYC	1 cut(s)	1123
BbsI	GAAGAC	1 cut(s)	667
Bbv12I	GWGCWC	1 cut(s)	918
BbvI	GCAGC	3 cut(s)	806, 1522, 1729
BccI	CCATC	7 cut(s)	782, 943, 1161, 1265, 1503, 1553, 1669
BcgI	CGANNNNNNTGC	2 cut(s)	1583, 1617
BclI	TGATCA	1 cut(s)	1317
BcnI	CCSGG	3 cut(s)	439, 590, 1123
BfaI	CTAG	3 cut(s)	798, 1374, 1730
BfuAI	ACCTGC	1 cut(s)	1031
BisI	GCNGC	6 cut(s)	51, 54, 477, 795, 1536, 1718
BlpI	GCTNAGC	1 cut(s)	1708
BlsI	GCNGC	6 cut(s)	52, 55, 478, 796, 1537, 1719
BmcAI	AGTACT	1 cut(s)	1746
Bme1390I	CCNGG	3 cut(s)	439, 590, 1123
Bme18I	GGWCC	2 cut(s)	132, 1150
BmeRI	GACNNNNNGTC	1 cut(s)	832
BmgT120I	GGNCC	7 cut(s)	132, 214, 263, 287, 1119, 1120, 1150
BmiI	GGNNCC	6 cut(s)	134, 388, 895, 954, 1100, 1121
BmrFI	CCNGG	3 cut(s)	439, 590, 1123
BmrI	ACTGGG	1 cut(s)	368
BmsI	GCATC	1 cut(s)	1217
BmuI	ACTGGG	1 cut(s)	368
BpiI	GAAGAC	1 cut(s)	667
Bpu10I	CCTNAGC	2 cut(s)	107, 1146
Bpu1102I	GCTNAGC	1 cut(s)	1708
Bpu14I	TTCGAA	1 cut(s)	1593
BpuEI	CTTGAG	2 cut(s)	179, 735
BpuMI	CCSGG	3 cut(s)	439, 590, 1123
BsaAI	YACGTR	2 cut(s)	463, 1315
BsaBI	GATNNNNATC	2 cut(s)	1256, 1454
BsaHI	GRCGYC	1 cut(s)	833
BsaJI	CCNNGG	5 cut(s)	217, 438, 840, 1526, 1668
BsaXI	ACNNNNNCTCC	6 cut(s)	237, 267, 408, 438, 1153, 1183
Bsc4I	CCNNNNNNNGG	4 cut(s)	380, 1163, 1192, 1436
Bse118I	RCCGGY	2 cut(s)	380, 1305
Bse1I	ACTGG	3 cut(s)	265, 374, 878
Bse3DI	GCAATG	4 cut(s)	312, 727, 1033, 1086
Bse8I	GATNNNNATC	2 cut(s)	1256, 1454
BseDI	CCNNGG	5 cut(s)	217, 438, 840, 1526, 1668
BseGI	GGATG	1 cut(s)	1153
BseJI	GATNNNNATC	2 cut(s)	1256, 1454
BseLI	CCNNNNNNNGG	4 cut(s)	380, 1163, 1192, 1436
BseMI	GCAATG	4 cut(s)	312, 727, 1033, 1086
BseMII	CTCAG	1 cut(s)	1722
BseNI	ACTGG	3 cut(s)	265, 374, 878
BseRI	GAGGAG	2 cut(s)	127, 1685
BseSI	GKGCMC	2 cut(s)	1123, 1134
BseXI	GCAGC	3 cut(s)	806, 1522, 1729
BseYI	CCCAGC	1 cut(s)	32
BsgI	GTGCAG	2 cut(s)	1521, 1736
Bsh1236I	CGCG	1 cut(s)	476
BshFI	GGCC	8 cut(s)	215, 264, 288, 932, 1121, 1289, 1531, 1667
BshNI	GGYRCC	2 cut(s)	386, 1098
BsiHKAI	GWGCWC	1 cut(s)	918
BsiSI	CCGG	6 cut(s)	318, 381, 438, 590, 1123, 1306
BslFI	GGGAC	5 cut(s)	73, 739, 1209, 1437, 1546
BslI	CCNNNNNNNGG	4 cut(s)	380, 1163, 1192, 1436
BsmFI	GGGAC	5 cut(s)	73, 739, 1209, 1437, 1546
BsmI	GAATGC	4 cut(s)	123, 237, 995, 1183
BsnI	GGCC	8 cut(s)	215, 264, 288, 932, 1121, 1289, 1531, 1667
Bsp119I	TTCGAA	1 cut(s)	1593
Bsp120I	GGGCCC	1 cut(s)	1119
Bsp1286I	GDGCHC	3 cut(s)	918, 1123, 1134
Bsp1407I	TGTACA	1 cut(s)	1202
Bsp143I	GATC	5 cut(s)	205, 852, 1251, 1317, 1449
Bsp1720I	GCTNAGC	1 cut(s)	1708
Bsp19I	CCATGG	2 cut(s)	840, 1526
BspACI	CCGC	6 cut(s)	48, 51, 54, 476, 845, 1430
BspANI	GGCC	8 cut(s)	215, 264, 288, 932, 1121, 1289, 1531, 1667
BspCNI	CTCAG	1 cut(s)	1721
BspFNI	CGCG	1 cut(s)	476
BspHI	TCATGA	1 cut(s)	1566
BspLI	GGNNCC	6 cut(s)	134, 388, 895, 954, 1100, 1121
BspMI	ACCTGC	1 cut(s)	1031
BspPI	GGATC	1 cut(s)	847
BspQI	GCTCTTC	2 cut(s)	138, 1226
BspT104I	TTCGAA	1 cut(s)	1593
BspT107I	GGYRCC	2 cut(s)	386, 1098
BsrDI	GCAATG	4 cut(s)	312, 727, 1033, 1086
BsrFI	RCCGGY	2 cut(s)	380, 1305
BsrGI	TGTACA	1 cut(s)	1202
BsrI	ACTGG	3 cut(s)	265, 374, 878
BssAI	RCCGGY	2 cut(s)	380, 1305
BssECI	CCNNGG	5 cut(s)	217, 438, 840, 1526, 1668
BssMI	GATC	5 cut(s)	205, 852, 1251, 1317, 1449
BssNI	GRCGYC	1 cut(s)	833
BssT1I	CCWWGG	3 cut(s)	217, 840, 1526
Bst4CI	ACNGT	5 cut(s)	673, 1098, 1419, 1542, 1599
Bst6I	CTCTTC	4 cut(s)	138, 843, 1226, 1364
BstACI	GRCGYC	1 cut(s)	833
BstAPI	GCANNNNNTGC	1 cut(s)	1214
BstAUI	TGTACA	1 cut(s)	1202
BstBAI	YACGTR	2 cut(s)	463, 1315
BstBI	TTCGAA	1 cut(s)	1593
BstC8I	GCNNGC	8 cut(s)	123, 286, 712, 875, 1024, 1048, 1265, 1533
BstDEI	CTNAG	3 cut(s)	107, 1146, 1708
BstDSI	CCRYGG	2 cut(s)	840, 1526
BstF5I	GGATG	1 cut(s)	1153
BstFNI	CGCG	1 cut(s)	476
BstHHI	GCGC	2 cut(s)	763, 1219
BstKTI	GATC	5 cut(s)	208, 855, 1254, 1320, 1452
BstMBI	GATC	5 cut(s)	205, 852, 1251, 1317, 1449
BstMWI	GCNNNNNNNGC	6 cut(s)	386, 482, 819, 1214, 1522, 1726
BstSCI	CCNGG	3 cut(s)	437, 588, 1121
BstSLI	GKGCMC	2 cut(s)	1123, 1134
BstSNI	TACGTA	1 cut(s)	463
BstUI	CGCG	1 cut(s)	476
BstV1I	GCAGC	3 cut(s)	806, 1522, 1729
BstV2I	GAAGAC	1 cut(s)	667
BstX2I	RGATCY	1 cut(s)	852
BstXI	CCANNNNNNTGG	1 cut(s)	739
BstYI	RGATCY	1 cut(s)	852
BsuRI	GGCC	8 cut(s)	215, 264, 288, 932, 1121, 1289, 1531, 1667
BtgI	CCRYGG	2 cut(s)	840, 1526
BtsCI	GGATG	1 cut(s)	1153
BtsI	GCAGTG	1 cut(s)	1690
BtsIMutI	CAGTG	2 cut(s)	1538, 1690
BveI	ACCTGC	1 cut(s)	1031
Cac8I	GCNNGC	8 cut(s)	123, 286, 712, 875, 1024, 1048, 1265, 1533
CciI	TCATGA	1 cut(s)	1566
CfoI	GCGC	2 cut(s)	763, 1219
Cfr10I	RCCGGY	2 cut(s)	380, 1305
Cfr13I	GGNCC	7 cut(s)	132, 214, 263, 287, 1119, 1120, 1150
CseI	GACGC	1 cut(s)	822
Csp6I	GTAC	5 cut(s)	24, 460, 1099, 1203, 1745
CspCI	CAANNNNNGTGG	2 cut(s)	1011, 1046
CviQI	GTAC	5 cut(s)	24, 460, 1099, 1203, 1745
DdeI	CTNAG	3 cut(s)	107, 1146, 1708
DpnI	GATC	5 cut(s)	207, 854, 1253, 1319, 1451
DpnII	GATC	5 cut(s)	205, 852, 1251, 1317, 1449
DriI	GACNNNNNGTC	1 cut(s)	832
EaeI	YGGCCR	1 cut(s)	1287
Eam1104I	CTCTTC	4 cut(s)	138, 843, 1226, 1364
Eam1105I	GACNNNNNGTC	1 cut(s)	832
EarI	CTCTTC	4 cut(s)	138, 843, 1226, 1364
EciI	GGCGGA	1 cut(s)	860
Eco105I	TACGTA	1 cut(s)	463
Eco130I	CCWWGG	3 cut(s)	217, 840, 1526
Eco24I	GRGCYC	1 cut(s)	1123
Eco47I	GGWCC	2 cut(s)	132, 1150
Eco57I	CTGAAG	2 cut(s)	793, 1598
EcoO109I	RGGNCCY	1 cut(s)	1119
EcoT14I	CCWWGG	3 cut(s)	217, 840, 1526
EcoT22I	ATGCAT	1 cut(s)	997
EcoT38I	GRGCYC	1 cut(s)	1123
ErhI	CCWWGG	3 cut(s)	217, 840, 1526
FaqI	GGGAC	5 cut(s)	73, 739, 1209, 1437, 1546
FbaI	TGATCA	1 cut(s)	1317
FblI	GTMKAC	1 cut(s)	1445
Fnu4HI	GCNGC	6 cut(s)	51, 54, 477, 795, 1536, 1718
FokI	GGATG	1 cut(s)	1140
FriOI	GRGCYC	1 cut(s)	1123
Fsp4HI	GCNGC	6 cut(s)	51, 54, 477, 795, 1536, 1718
FspBI	CTAG	3 cut(s)	798, 1374, 1730
GlaI	GCGC	2 cut(s)	762, 1218
GluI	GCNGC	6 cut(s)	51, 54, 477, 795, 1536, 1718
GsaI	CCCAGC	1 cut(s)	36
HaeIII	GGCC	8 cut(s)	215, 264, 288, 932, 1121, 1289, 1531, 1667
HapII	CCGG	6 cut(s)	318, 381, 438, 590, 1123, 1306
HgaI	GACGC	1 cut(s)	822
HhaI	GCGC	2 cut(s)	763, 1219
Hin1I	GRCGYC	1 cut(s)	833
Hin6I	GCGC	2 cut(s)	761, 1217
HinP1I	GCGC	2 cut(s)	761, 1217
HincII	GTYRAC	2 cut(s)	837, 1161
HindII	GTYRAC	2 cut(s)	837, 1161
HindIII	AAGCTT	2 cut(s)	490, 1048
HinfI	GANTC	4 cut(s)	246, 827, 885, 1699
HpaII	CCGG	6 cut(s)	318, 381, 438, 590, 1123, 1306
HphI	GGTGA	3 cut(s)	754, 898, 1216
Hpy166II	GTNNAC	7 cut(s)	132, 805, 837, 1161, 1303, 1446, 1651
Hpy188I	TCNGA	2 cut(s)	404, 416
Hpy188III	TCNNGA	3 cut(s)	655, 785, 1567
Hpy8I	GTNNAC	7 cut(s)	132, 805, 837, 1161, 1303, 1446, 1651
HpyAV	CCTTC	4 cut(s)	300, 421, 1110, 1474
HpyCH4III	ACNGT	5 cut(s)	673, 1098, 1419, 1542, 1599
HpyCH4IV	ACGT	3 cut(s)	128, 462, 1314
HpyCH4V	TGCA	8 cut(s)	125, 515, 720, 995, 1046, 1538, 1717, 1741
HpyF10VI	GCNNNNNNNGC	6 cut(s)	386, 482, 819, 1214, 1522, 1726
HpyF3I	CTNAG	3 cut(s)	107, 1146, 1708
HpySE526I	ACGT	3 cut(s)	128, 462, 1314
Hsp92I	GRCGYC	1 cut(s)	833
HspAI	GCGC	2 cut(s)	761, 1217
KpnI	GGTACC	1 cut(s)	1102
Ksp22I	TGATCA	1 cut(s)	1317
Kzo9I	GATC	5 cut(s)	205, 852, 1251, 1317, 1449
LguI	GCTCTTC	2 cut(s)	138, 1226
LmnI	GCTCC	2 cut(s)	653, 1680
Lsp1109I	GCAGC	3 cut(s)	806, 1522, 1729
LweI	GCATC	1 cut(s)	1217
MaeI	CTAG	3 cut(s)	798, 1374, 1730
MaeII	ACGT	3 cut(s)	128, 462, 1314
MaeIII	GTNAC	5 cut(s)	253, 347, 428, 772, 1685
MalI	GATC	5 cut(s)	207, 854, 1253, 1319, 1451
MboI	GATC	5 cut(s)	205, 852, 1251, 1317, 1449
MfeI	CAATTG	1 cut(s)	1212
MflI	RGATCY	1 cut(s)	852
MhlI	GDGCHC	3 cut(s)	918, 1123, 1134
MlsI	TGGCCA	1 cut(s)	1289
MluCI	AATT	7 cut(s)	356, 419, 526, 663, 705, 756, 1212
MluNI	TGGCCA	1 cut(s)	1289
MlyI	GAGTC	2 cut(s)	255, 821
MmeI	TCCRAC	4 cut(s)	205, 223, 561, 862
Mox20I	TGGCCA	1 cut(s)	1289
Mph1103I	ATGCAT	1 cut(s)	997
MroXI	GAANNNNTTC	1 cut(s)	1583
MscI	TGGCCA	1 cut(s)	1289
MseI	TTAA	2 cut(s)	1407, 1554
MslI	CAYNNNNRTG	1 cut(s)	911
Msp20I	TGGCCA	1 cut(s)	1289
MspA1I	CMGCKG	1 cut(s)	1712
MspI	CCGG	6 cut(s)	318, 381, 438, 590, 1123, 1306
MspR9I	CCNGG	3 cut(s)	439, 590, 1123
MunI	CAATTG	1 cut(s)	1212
Mva1269I	GAATGC	4 cut(s)	123, 237, 995, 1183
MvnI	CGCG	1 cut(s)	476
MwoI	GCNNNNNNNGC	6 cut(s)	386, 482, 819, 1214, 1522, 1726
NciI	CCSGG	3 cut(s)	439, 590, 1123
NcoI	CCATGG	2 cut(s)	840, 1526
NdeII	GATC	5 cut(s)	205, 852, 1251, 1317, 1449
NlaIV	GGNNCC	6 cut(s)	134, 388, 895, 954, 1100, 1121
NmeAIII	GCCGAG	2 cut(s)	809, 1693
NmuCI	GTSAC	2 cut(s)	253, 1685
NsiI	ATGCAT	1 cut(s)	997
NspV	TTCGAA	1 cut(s)	1593
OliI	CACNNNNGTG	1 cut(s)	911
PagI	TCATGA	1 cut(s)	1566
PaqCI	CACCTGC	1 cut(s)	1031
PciSI	GCTCTTC	2 cut(s)	138, 1226
PctI	GAATGC	4 cut(s)	123, 237, 995, 1183
PdmI	GAANNNNTTC	1 cut(s)	1583
PfeI	GAWTC	2 cut(s)	885, 1699
PkrI	GCNGC	6 cut(s)	52, 55, 478, 796, 1537, 1719
PleI	GAGTC	2 cut(s)	254, 821
PpsI	GAGTC	2 cut(s)	254, 821
Ppu21I	YACGTR	2 cut(s)	463, 1315
PsiI	TTATAA	1 cut(s)	704
PspFI	CCCAGC	1 cut(s)	32
PspN4I	GGNNCC	6 cut(s)	134, 388, 895, 954, 1100, 1121
PspOMI	GGGCCC	1 cut(s)	1119
PspPI	GGNCC	7 cut(s)	132, 214, 263, 287, 1119, 1120, 1150
PsuI	RGATCY	1 cut(s)	852
PvuII	CAGCTG	1 cut(s)	1712
RsaI	GTAC	5 cut(s)	25, 461, 1100, 1204, 1746
RsaNI	GTAC	5 cut(s)	24, 460, 1099, 1203, 1745
RseI	CAYNNNNRTG	1 cut(s)	911
SapI	GCTCTTC	2 cut(s)	138, 1226
SaqAI	TTAA	2 cut(s)	1407, 1554
SatI	GCNGC	6 cut(s)	51, 54, 477, 795, 1536, 1718
Sau3AI	GATC	5 cut(s)	205, 852, 1251, 1317, 1449
Sau96I	GGNCC	7 cut(s)	132, 214, 263, 287, 1119, 1120, 1150
ScaI	AGTACT	1 cut(s)	1746
SchI	GAGTC	2 cut(s)	255, 821
ScrFI	CCNGG	3 cut(s)	439, 590, 1123
SduI	GDGCHC	3 cut(s)	918, 1123, 1134
SfaNI	GCATC	1 cut(s)	1217
SfuI	TTCGAA	1 cut(s)	1593
SinI	GGWCC	2 cut(s)	132, 1150
SmiMI	CAYNNNNRTG	1 cut(s)	911
SmlI	CTYRAG	2 cut(s)	194, 750
SmoI	CTYRAG	2 cut(s)	194, 750
SnaBI	TACGTA	1 cut(s)	463
Sse9I	AATT	7 cut(s)	356, 419, 526, 663, 705, 756, 1212
SsiI	CCGC	6 cut(s)	48, 51, 54, 476, 845, 1430
SspMI	CTAG	3 cut(s)	798, 1374, 1730
StyD4I	CCNGG	3 cut(s)	437, 588, 1121
StyI	CCWWGG	3 cut(s)	217, 840, 1526
TaaI	ACNGT	5 cut(s)	673, 1098, 1419, 1542, 1599
TaiI	ACGT	3 cut(s)	131, 465, 1317
TaqI	TCGA	3 cut(s)	470, 1233, 1593
TasI	AATT	7 cut(s)	356, 419, 526, 663, 705, 756, 1212
TatI	WGTACW	3 cut(s)	23, 1202, 1744
TauI	GCSGC	3 cut(s)	53, 56, 479
TfiI	GAWTC	2 cut(s)	885, 1699
Tru1I	TTAA	2 cut(s)	1407, 1554
Tru9I	TTAA	2 cut(s)	1407, 1554
TscAI	CASTG	2 cut(s)	1545, 1690
TseFI	GTSAC	2 cut(s)	253, 1685
TseI	GCWGC	3 cut(s)	794, 1535, 1717
Tsp45I	GTSAC	2 cut(s)	253, 1685
TspDTI	ATGAA	6 cut(s)	68, 197, 289, 1510, 1609, 1707
TspGWI	ACGGA	3 cut(s)	283, 886, 1146
TspRI	CASTG	2 cut(s)	1545, 1690
VpaK11BI	GGWCC	2 cut(s)	132, 1150
XapI	RAATTY	3 cut(s)	356, 419, 526
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1189, 1524
XmiI	GTMKAC	1 cut(s)	1445
XmnI	GAANNNNTTC	1 cut(s)	1583
XspI	CTAG	3 cut(s)	798, 1374, 1730
ZrmI	AGTACT	1 cut(s)	1746
Zsp2I	ATGCAT	1 cut(s)	997

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.