Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0003422

Physical Location & Seq

Genomic Coordinates Reverse (-)

6340528 .. 6344629

Gene Structure 4102 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1047000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1806 bp

ATGGAAGCCAAAGCACTTAAACTTATCGTATGTTGTAGCACAAAAAGCATGGCCACCACCACCAGCCAAACTACAGCACCCAGAAACAGCACCACTGCTGCTGCCTCCATTTGCTTCTCCAAGTATCTTCATTCGCTGTCCCAAACACCCCACAGGCTTAGGAGGAGAATGCTTGCCACATGGACCCCTGACGAAGAGCTGAACCAAGTGAGGCAAAGGTCAGGGGCAGACATGAAAAGGAAACTCAAGTGGTATGATTTGATGGCCCTCGGCGTTGGAGGAATGCTTGGTGTTGGAGTCTTTGTCACAACTGGACCTGTCGCCCACCAGACGGCTGGCCCTTCCGTCTTCATTTCCTATATCGTAGCTGGAATGTCAGCCCTCCTTTCTTCCTTGTGTTACGCTGAATTCTCTGTCCAAATCCCAGTTGCAGGTGGTGCCTTTAGTTATCTCCGATTGACCTTCGGAGAATTTGTGGGTTACTTTGCTGGGGCTAATATACTTATGGAGTACGTATTGTCGAACGCCGCTGTTGCCAGAAGTTTTACTGAGTATTTATCCTCTACATTTGGAGAAAATGATCCAAGGACATGGAGAGTAGAAGTGAATGGTTTGGTAAAGGGATATGATATGTTGGACTTCCCAGCTGTTGCTCTTGTTCTTCTTCTCACTCTCTGCCTTTGCCATAGCACAAAGGAAAGCTCCCTGTTGAACTTAATTATGACAGTCTTCCATGTGGTTTTCTTTGGATTTATTATAATTGCTGGTTTCTGCAATGGGACTTCCAAAAACTTGGTGAAGCCTAAAGGAATTGCTCCTTATGGTGTTAGAGGTGTTCTTGATGGGGCAGCTAGGGTTTACTTCAGCTATATCGGCTATGACTCGGCTTCAACCATGGCGGAAGAGATCCAAAGCCCTTTGACGAGCTTGCCAATTGGAATCGTTGGTTCCGTAGTCATCACCTCTGTGCTTTATTGCCTCATGGCCTTGTCCTTGTGTTTGATGGTTCCTTACAACAAGATAACAGAAAAAGTGACATTTTCAACGGCATTCAAAGAAATTGGTTGGGGATGGGCAAGCAATGTGGTAGGGGCAGGTGCAAGCTTGGGGATTGTCGCTTCACTTTTGGTAGCAATGTTAGGCCAAGCAAGATACCTTTGTGTCATTGGAAGGGCCCGGCTGGTGCCCTCATGGTTAGCCAAGGTCCATCCTTCAACTGGCACTCCATTGAATGCCACCCTTTTCTTGGGACTTTGCACAGCATCAATTGCGCTCTTCACCGACCTCGAAATAGTAATGGAAATGATCTCTATCGGCACGCTCTTGGTGTTCTACCTTGTGGCGAATGCTCTCATTTACCGGCGATACGTGATCATTAGCAACAACCCTCCATTTCAAACTCTCTTGTTCCTCTTCCTCCTCTCATCAAGTGCTATTGGCTTTTCCATGTCATGGAAGTTTCATCAACAATGGTGGGGGCTACCGCTTTTCGGGGTGTCCACAGTCACCATCATTGCCTTCTTCAACTACGCAATTCCTTGCGTTCGCCATCAGATAGGGTGGTCGATGCCATTCATGCCATGGCCTGCTGCACTGTCCATCTTCCTTAATGTGTTCCTCATGACGACACTGAAAAAGTTCTCGTTCGAAAGGTTTGCAATATGGGCATGTTTCATAACGCTGTTCTATTTGTTGTATGGTGTTCACTCAACCTATCAGGCAGAGGAGATGGGGAGTGGTGAGGATGAAGTGAATCCAAGCTCAGCTGTGCAACAAACTAAGCTAGACAATATGCAAGTACTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0008150 GO:0008509 GO:0008514 GO:0009605 GO:0009607 GO:0009624 GO:0015075 GO:0015171 GO:0015318 GO:0015711 GO:0015849 GO:0016020 GO:0022857 GO:0034220 GO:0043207 GO:0044464 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0098656 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

602

Amino Acids

65.89

Weight (kDa)

8.83

Isoelectric Point (pI)

31.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	82 - 526	1.6e-45	Amino acid permease
AA_permease	PF00324	88 - 513	5.5e-24	Amino acid permease
AA_permease_C	PF13906	521 - 570	3.6e-10	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003422)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10600 AT3G10600 AT5G04770 AT5G04770 AT5G04770
fragaria_vesca	FvH4_5g20380 FvH4_5g20380 FvH4_7g05050
malus_domestica	MD02G1259000.v1.1 MD04G1055400.v1.1 MD06G1047000.v1.1
prunus_persica	Prupe.2G071100_v2.0.a1 Prupe.2G071100_v2.0.a1 Prupe.5G055200_v2.0.a1
pyrus_communis	pycom02g22020 pycom04g04840
rosa_chinensis	RchiOBHm_Chr1g0331741 RchiOBHm_Chr7g0205641
rosa_laevigata	RLG00000003368 RLG00000029718
rosa_multiflora	Rmu_sc0006124.1_g000001 Rmu_ssc0000089.1_g000013
rosa_roxburghii	Rroxscaffold_3G00252110 Rroxscaffold_4G00318820
rosa_rugosa	Rorug01G0095900 Rorug01G0096000 Rorug07G0092300 Rorug07G0092300
rosa_samantha	Rh1BG091400 Rh1DG125300 Rh7AG223200 Rh7BG218200 Rh7CG236500 Rh7DG230200
rosa_wichuraiana	Rw1G009690 Rw7G019250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	758
AarI	CACCTGC	2 cut(s)	422, 1085
Acc36I	ACCTGC	2 cut(s)	422, 1085
AccB1I	GGYRCC	2 cut(s)	437, 1183
AccB7I	CCANNNNNTGG	1 cut(s)	1452
AciI	CCGC	3 cut(s)	528, 899, 1484
AclWI	GGATC	2 cut(s)	575, 901
AcoI	YGGCCR	1 cut(s)	51
AcsI	RAATTY	2 cut(s)	407, 470
AcuI	CTGAAG	1 cut(s)	847
AfaI	GTAC	2 cut(s)	512, 1800
AfiI	CCNNNNNNNGG	6 cut(s)	331, 431, 1217, 1246, 1452, 1490
AgsI	TTSAA	8 cut(s)	712, 891, 1044, 1054, 1215, 1231, 1397, 1525
AleI	CACNNNNGTG	1 cut(s)	965
AlwI	GGATC	2 cut(s)	575, 901
AoxI	GGCC	7 cut(s)	51, 264, 337, 984, 1141, 1173, 1583
ApaI	GGGCCC	1 cut(s)	1177
ApeKI	GCWGC	4 cut(s)	98, 101, 848, 1589
ApoI	RAATTY	2 cut(s)	407, 470
Asp700I	GAANNNNTTC	1 cut(s)	1637
AspLEI	GCGC	1 cut(s)	1273
AspS9I	GGNCC	7 cut(s)	183, 265, 314, 338, 1173, 1174, 1204
AsuC2I	CCSGG	1 cut(s)	1177
AsuHPI	GGTGA	5 cut(s)	808, 952, 1270, 1498, 1751
AsuII	TTCGAA	1 cut(s)	1647
AvaII	GGWCC	3 cut(s)	183, 314, 1204
BaeGI	GKGCMC	2 cut(s)	1177, 1188
BaeI	ACNNNNGTAYC	2 cut(s)	1144, 1177
BalI	TGGCCA	1 cut(s)	53
BanI	GGYRCC	2 cut(s)	437, 1183
BanII	GRGCYC	1 cut(s)	1177
BbsI	GAAGAC	2 cut(s)	340, 721
BbvI	GCAGC	4 cut(s)	85, 88, 860, 1576
BccI	CCATC	9 cut(s)	256, 836, 997, 1065, 1215, 1517, 1557, 1607, 1723
BceAI	ACGGC	2 cut(s)	348, 1062
BcgI	CGANNNNNNTGC	2 cut(s)	1637, 1671
BclI	TGATCA	1 cut(s)	1371
BcnI	CCSGG	1 cut(s)	1177
BfaI	CTAG	2 cut(s)	852, 1784
BfmI	CTRYAG	1 cut(s)	72
BfuAI	ACCTGC	2 cut(s)	422, 1085
BisI	GCNGC	5 cut(s)	99, 102, 528, 849, 1590
BlpI	GCTNAGC	1 cut(s)	1762
BlsI	GCNGC	5 cut(s)	100, 103, 529, 850, 1591
BmcAI	AGTACT	1 cut(s)	1800
Bme1390I	CCNGG	1 cut(s)	1177
Bme18I	GGWCC	3 cut(s)	183, 314, 1204
BmgT120I	GGNCC	7 cut(s)	183, 265, 314, 338, 1173, 1174, 1204
BmiI	GGNNCC	6 cut(s)	185, 439, 949, 1008, 1175, 1185
BmrFI	CCNGG	1 cut(s)	1177
BmrI	ACTGGG	1 cut(s)	419
BmsI	GCATC	2 cut(s)	1271, 1557
BmuI	ACTGGG	1 cut(s)	419
BpiI	GAAGAC	2 cut(s)	340, 721
Bpu10I	CCTNAGC	1 cut(s)	158
Bpu1102I	GCTNAGC	1 cut(s)	1762
Bpu14I	TTCGAA	1 cut(s)	1647
BpuEI	CTTGAG	1 cut(s)	230
BpuMI	CCSGG	1 cut(s)	1177
BsaAI	YACGTR	2 cut(s)	514, 1369
BsaBI	GATNNNNATC	1 cut(s)	1310
BsaJI	CCNNGG	5 cut(s)	268, 584, 894, 1200, 1580
BsaXI	ACNNNNNCTCC	6 cut(s)	288, 318, 459, 489, 1207, 1237
Bsc4I	CCNNNNNNNGG	6 cut(s)	331, 431, 1217, 1246, 1452, 1490
Bse118I	RCCGGY	1 cut(s)	1359
Bse1I	ACTGG	3 cut(s)	316, 425, 1222
Bse3DI	GCAATG	4 cut(s)	781, 1087, 1140, 1512
Bse8I	GATNNNNATC	1 cut(s)	1310
BseDI	CCNNGG	5 cut(s)	268, 584, 894, 1200, 1580
BseGI	GGATG	3 cut(s)	1076, 1207, 1750
BseJI	GATNNNNATC	1 cut(s)	1310
BseLI	CCNNNNNNNGG	6 cut(s)	331, 431, 1217, 1246, 1452, 1490
BseMI	GCAATG	4 cut(s)	781, 1087, 1140, 1512
BseMII	CTCAG	2 cut(s)	540, 1776
BseNI	ACTGG	3 cut(s)	316, 425, 1222
BseRI	GAGGAG	3 cut(s)	178, 1409, 1739
BseSI	GKGCMC	2 cut(s)	1177, 1188
BseXI	GCAGC	4 cut(s)	85, 88, 860, 1576
BseYI	CCCAGC	2 cut(s)	488, 643
BsgI	GTGCAG	1 cut(s)	1575
BshFI	GGCC	7 cut(s)	53, 266, 339, 986, 1143, 1175, 1585
BshNI	GGYRCC	2 cut(s)	437, 1183
BsiSI	CCGG	2 cut(s)	1177, 1360
BslFI	GGGAC	3 cut(s)	124, 793, 1263
BslI	CCNNNNNNNGG	6 cut(s)	331, 431, 1217, 1246, 1452, 1490
BsmFI	GGGAC	3 cut(s)	124, 793, 1263
BsmI	GAATGC	5 cut(s)	174, 288, 1049, 1237, 1351
BsnI	GGCC	7 cut(s)	53, 266, 339, 986, 1143, 1175, 1585
Bsp119I	TTCGAA	1 cut(s)	1647
Bsp120I	GGGCCC	1 cut(s)	1173
Bsp1286I	GDGCHC	2 cut(s)	1177, 1188
Bsp143I	GATC	4 cut(s)	580, 906, 1305, 1371
Bsp1720I	GCTNAGC	1 cut(s)	1762
Bsp19I	CCATGG	2 cut(s)	894, 1580
BspACI	CCGC	3 cut(s)	528, 899, 1484
BspANI	GGCC	7 cut(s)	53, 266, 339, 986, 1143, 1175, 1585
BspCNI	CTCAG	2 cut(s)	541, 1775
BspHI	TCATGA	1 cut(s)	1620
BspLI	GGNNCC	6 cut(s)	185, 439, 949, 1008, 1175, 1185
BspMI	ACCTGC	2 cut(s)	422, 1085
BspPI	GGATC	2 cut(s)	575, 901
BspQI	GCTCTTC	2 cut(s)	189, 1280
BspT104I	TTCGAA	1 cut(s)	1647
BspT107I	GGYRCC	2 cut(s)	437, 1183
BsrDI	GCAATG	4 cut(s)	781, 1087, 1140, 1512
BsrFI	RCCGGY	1 cut(s)	1359
BsrI	ACTGG	3 cut(s)	316, 425, 1222
BssAI	RCCGGY	1 cut(s)	1359
BssECI	CCNNGG	5 cut(s)	268, 584, 894, 1200, 1580
BssMI	GATC	4 cut(s)	580, 906, 1305, 1371
BssT1I	CCWWGG	4 cut(s)	584, 894, 1200, 1580
Bst4CI	ACNGT	3 cut(s)	727, 1504, 1596
Bst6I	CTCTTC	4 cut(s)	189, 897, 1280, 1418
BstAPI	GCANNNNNTGC	2 cut(s)	437, 1268
BstBAI	YACGTR	2 cut(s)	514, 1369
BstBI	TTCGAA	1 cut(s)	1647
BstC8I	GCNNGC	7 cut(s)	174, 337, 929, 1078, 1102, 1319, 1587
BstDEI	CTNAG	4 cut(s)	158, 549, 1762, 1779
BstDSI	CCRYGG	2 cut(s)	894, 1580
BstF5I	GGATG	3 cut(s)	1076, 1207, 1750
BstHHI	GCGC	1 cut(s)	1273
BstKTI	GATC	4 cut(s)	583, 909, 1308, 1374
BstMBI	GATC	4 cut(s)	580, 906, 1305, 1371
BstMWI	GCNNNNNNNGC	7 cut(s)	45, 437, 533, 873, 1268, 1576, 1664
BstNSI	RCATGY	1 cut(s)	1671
BstSCI	CCNGG	1 cut(s)	1175
BstSFI	CTRYAG	1 cut(s)	72
BstSLI	GKGCMC	2 cut(s)	1177, 1188
BstSNI	TACGTA	1 cut(s)	514
BstV1I	GCAGC	4 cut(s)	85, 88, 860, 1576
BstV2I	GAAGAC	2 cut(s)	340, 721
BstX2I	RGATCY	1 cut(s)	906
BstXI	CCANNNNNNTGG	3 cut(s)	335, 591, 793
BstYI	RGATCY	1 cut(s)	906
BsuRI	GGCC	7 cut(s)	53, 266, 339, 986, 1143, 1175, 1585
BtgI	CCRYGG	2 cut(s)	894, 1580
BtsCI	GGATG	3 cut(s)	1076, 1207, 1750
BtsI	GCAGTG	1 cut(s)	93
BtsIMutI	CAGTG	3 cut(s)	93, 1592, 1628
BveI	ACCTGC	2 cut(s)	422, 1085
Cac8I	GCNNGC	7 cut(s)	174, 337, 929, 1078, 1102, 1319, 1587
CciI	TCATGA	1 cut(s)	1620
CfoI	GCGC	1 cut(s)	1273
Cfr10I	RCCGGY	1 cut(s)	1359
Cfr13I	GGNCC	7 cut(s)	183, 265, 314, 338, 1173, 1174, 1204
Csp6I	GTAC	2 cut(s)	511, 1799
CspCI	CAANNNNNGTGG	4 cut(s)	1065, 1100, 1454, 1489
CviQI	GTAC	2 cut(s)	511, 1799
DdeI	CTNAG	4 cut(s)	158, 549, 1762, 1779
DpnI	GATC	4 cut(s)	582, 908, 1307, 1373
DpnII	GATC	4 cut(s)	580, 906, 1305, 1371
EaeI	YGGCCR	1 cut(s)	51
Eam1104I	CTCTTC	4 cut(s)	189, 897, 1280, 1418
EarI	CTCTTC	4 cut(s)	189, 897, 1280, 1418
EciI	GGCGGA	1 cut(s)	914
Eco105I	TACGTA	1 cut(s)	514
Eco130I	CCWWGG	4 cut(s)	584, 894, 1200, 1580
Eco24I	GRGCYC	1 cut(s)	1177
Eco47I	GGWCC	3 cut(s)	183, 314, 1204
Eco57I	CTGAAG	1 cut(s)	847
EcoO109I	RGGNCCY	1 cut(s)	1173
EcoRI	GAATTC	1 cut(s)	407
EcoT14I	CCWWGG	4 cut(s)	584, 894, 1200, 1580
EcoT38I	GRGCYC	1 cut(s)	1177
ErhI	CCWWGG	4 cut(s)	584, 894, 1200, 1580
FaqI	GGGAC	3 cut(s)	124, 793, 1263
FbaI	TGATCA	1 cut(s)	1371
Fnu4HI	GCNGC	5 cut(s)	99, 102, 528, 849, 1590
FokI	GGATG	3 cut(s)	1083, 1194, 1757
FriOI	GRGCYC	1 cut(s)	1177
Fsp4HI	GCNGC	5 cut(s)	99, 102, 528, 849, 1590
FspBI	CTAG	2 cut(s)	852, 1784
GlaI	GCGC	1 cut(s)	1272
GluI	GCNGC	5 cut(s)	99, 102, 528, 849, 1590
GsaI	CCCAGC	2 cut(s)	492, 647
HaeIII	GGCC	7 cut(s)	53, 266, 339, 986, 1143, 1175, 1585
HapII	CCGG	2 cut(s)	1177, 1360
HhaI	GCGC	1 cut(s)	1273
Hin6I	GCGC	1 cut(s)	1271
HinP1I	GCGC	1 cut(s)	1271
HindIII	AAGCTT	1 cut(s)	1102
HinfI	GANTC	4 cut(s)	297, 881, 939, 1753
HpaII	CCGG	2 cut(s)	1177, 1360
HphI	GGTGA	5 cut(s)	808, 952, 1270, 1498, 1751
Hpy166II	GTNNAC	3 cut(s)	859, 1500, 1705
Hpy188I	TCNGA	3 cut(s)	455, 467, 1554
Hpy188III	TCNNGA	2 cut(s)	839, 1621
Hpy8I	GTNNAC	3 cut(s)	859, 1500, 1705
HpyAV	CCTTC	5 cut(s)	351, 472, 1164, 1221, 1528
HpyCH4III	ACNGT	3 cut(s)	727, 1504, 1596
HpyCH4IV	ACGT	2 cut(s)	513, 1368
HpyCH4V	TGCA	8 cut(s)	431, 774, 1100, 1257, 1592, 1658, 1771, 1795
HpyF10VI	GCNNNNNNNGC	7 cut(s)	45, 437, 533, 873, 1268, 1576, 1664
HpyF3I	CTNAG	4 cut(s)	158, 549, 1762, 1779
HpySE526I	ACGT	2 cut(s)	513, 1368
HspAI	GCGC	1 cut(s)	1271
Ksp22I	TGATCA	1 cut(s)	1371
Kzo9I	GATC	4 cut(s)	580, 906, 1305, 1371
LguI	GCTCTTC	2 cut(s)	189, 1280
LmnI	GCTCC	2 cut(s)	707, 820
Lsp1109I	GCAGC	4 cut(s)	85, 88, 860, 1576
LweI	GCATC	2 cut(s)	1271, 1557
MaeI	CTAG	2 cut(s)	852, 1784
MaeII	ACGT	2 cut(s)	513, 1368
MaeIII	GTNAC	5 cut(s)	304, 398, 479, 1033, 1504
MalI	GATC	4 cut(s)	582, 908, 1307, 1373
MboI	GATC	4 cut(s)	580, 906, 1305, 1371
MfeI	CAATTG	2 cut(s)	933, 1266
MflI	RGATCY	1 cut(s)	906
MhlI	GDGCHC	2 cut(s)	1177, 1188
MlsI	TGGCCA	1 cut(s)	53
MluCI	AATT	9 cut(s)	407, 470, 717, 759, 810, 933, 1059, 1266, 1533
MluNI	TGGCCA	1 cut(s)	53
MlyI	GAGTC	2 cut(s)	306, 875
MmeI	TCCRAC	3 cut(s)	256, 274, 615
Mox20I	TGGCCA	1 cut(s)	53
MroXI	GAANNNNTTC	1 cut(s)	1637
MscI	TGGCCA	1 cut(s)	53
MseI	TTAA	3 cut(s)	18, 716, 1608
MslI	CAYNNNNRTG	1 cut(s)	965
Msp20I	TGGCCA	1 cut(s)	53
MspA1I	CMGCKG	3 cut(s)	530, 647, 1766
MspI	CCGG	2 cut(s)	1177, 1360
MspR9I	CCNGG	1 cut(s)	1177
MunI	CAATTG	2 cut(s)	933, 1266
Mva1269I	GAATGC	5 cut(s)	174, 288, 1049, 1237, 1351
MwoI	GCNNNNNNNGC	7 cut(s)	45, 437, 533, 873, 1268, 1576, 1664
NciI	CCSGG	1 cut(s)	1177
NcoI	CCATGG	2 cut(s)	894, 1580
NdeII	GATC	4 cut(s)	580, 906, 1305, 1371
NlaIV	GGNNCC	6 cut(s)	185, 439, 949, 1008, 1175, 1185
NmeAIII	GCCGAG	2 cut(s)	249, 863
NmuCI	GTSAC	3 cut(s)	304, 1033, 1504
NspI	RCATGY	1 cut(s)	1671
NspV	TTCGAA	1 cut(s)	1647
OliI	CACNNNNGTG	1 cut(s)	965
PagI	TCATGA	1 cut(s)	1620
PaqCI	CACCTGC	2 cut(s)	422, 1085
PciSI	GCTCTTC	2 cut(s)	189, 1280
PcsI	WCGNNNNNNNCGW	1 cut(s)	948
PctI	GAATGC	5 cut(s)	174, 288, 1049, 1237, 1351
PdmI	GAANNNNTTC	1 cut(s)	1637
PfeI	GAWTC	2 cut(s)	939, 1753
PflMI	CCANNNNNTGG	1 cut(s)	1452
PkrI	GCNGC	5 cut(s)	100, 103, 529, 850, 1591
PleI	GAGTC	2 cut(s)	305, 875
PpsI	GAGTC	2 cut(s)	305, 875
Ppu21I	YACGTR	2 cut(s)	514, 1369
PsiI	TTATAA	1 cut(s)	758
PspFI	CCCAGC	2 cut(s)	488, 643
PspN4I	GGNNCC	6 cut(s)	185, 439, 949, 1008, 1175, 1185
PspOMI	GGGCCC	1 cut(s)	1173
PspPI	GGNCC	7 cut(s)	183, 265, 314, 338, 1173, 1174, 1204
PsuI	RGATCY	1 cut(s)	906
PvuII	CAGCTG	2 cut(s)	647, 1766
RsaI	GTAC	2 cut(s)	512, 1800
RsaNI	GTAC	2 cut(s)	511, 1799
RseI	CAYNNNNRTG	1 cut(s)	965
SapI	GCTCTTC	2 cut(s)	189, 1280
SaqAI	TTAA	3 cut(s)	18, 716, 1608
SatI	GCNGC	5 cut(s)	99, 102, 528, 849, 1590
Sau3AI	GATC	4 cut(s)	580, 906, 1305, 1371
Sau96I	GGNCC	7 cut(s)	183, 265, 314, 338, 1173, 1174, 1204
ScaI	AGTACT	1 cut(s)	1800
SchI	GAGTC	2 cut(s)	306, 875
ScrFI	CCNGG	1 cut(s)	1177
SduI	GDGCHC	2 cut(s)	1177, 1188
SfaNI	GCATC	2 cut(s)	1271, 1557
SfcI	CTRYAG	1 cut(s)	72
SfuI	TTCGAA	1 cut(s)	1647
SinI	GGWCC	3 cut(s)	183, 314, 1204
SmiMI	CAYNNNNRTG	1 cut(s)	965
SmlI	CTYRAG	1 cut(s)	245
SmoI	CTYRAG	1 cut(s)	245
SnaBI	TACGTA	1 cut(s)	514
Sse9I	AATT	9 cut(s)	407, 470, 717, 759, 810, 933, 1059, 1266, 1533
SsiI	CCGC	3 cut(s)	528, 899, 1484
SspMI	CTAG	2 cut(s)	852, 1784
StyD4I	CCNGG	1 cut(s)	1175
StyI	CCWWGG	4 cut(s)	584, 894, 1200, 1580
TaaI	ACNGT	3 cut(s)	727, 1504, 1596
TaiI	ACGT	2 cut(s)	516, 1371
TaqI	TCGA	4 cut(s)	521, 1287, 1565, 1647
TasI	AATT	9 cut(s)	407, 470, 717, 759, 810, 933, 1059, 1266, 1533
TatI	WGTACW	1 cut(s)	1798
TauI	GCSGC	1 cut(s)	530
TfiI	GAWTC	2 cut(s)	939, 1753
Tru1I	TTAA	3 cut(s)	18, 716, 1608
Tru9I	TTAA	3 cut(s)	18, 716, 1608
TscAI	CASTG	3 cut(s)	100, 1599, 1635
TseFI	GTSAC	3 cut(s)	304, 1033, 1504
TseI	GCWGC	4 cut(s)	98, 101, 848, 1589
Tsp45I	GTSAC	3 cut(s)	304, 1033, 1504
TspDTI	ATGAA	7 cut(s)	119, 248, 340, 1451, 1564, 1663, 1761
TspGWI	ACGGA	2 cut(s)	334, 940
TspRI	CASTG	3 cut(s)	100, 1599, 1635
Van91I	CCANNNNNTGG	1 cut(s)	1452
VpaK11BI	GGWCC	3 cut(s)	183, 314, 1204
XapI	RAATTY	2 cut(s)	407, 470
XceI	RCATGY	1 cut(s)	1671
XcmI	CCANNNNNNNNNTGG	4 cut(s)	332, 1214, 1243, 1578
XmnI	GAANNNNTTC	1 cut(s)	1637
XspI	CTAG	2 cut(s)	852, 1784
ZrmI	AGTACT	1 cut(s)	1800

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.