Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0003422

Physical Location & Seq

Genomic Coordinates Forward (+)

20958191 .. 20960803

Gene Structure 2613 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG223200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1638 bp

ATGGCTTCCACCACCACCACAACTCAAACTCCTCCCAACAACACAAACACCAGTCTTTGCTTCTCCAACTATCTCCAATCCCTGTCCCAAACACCCCACAGGCTCAGAAAGAGAATGCTTGCCACCTGGACCCCAGACCAGGAGCTCAACCAAGTGAGGCAAAGGTCAGGGGCTGATATGAAGAGAAAACTCAAGTGGTATGATCTCATGGCTCTTGGTGTTGGAGGCATGCTTGGCGTTGGAGTCTTTGTCACAACAGTTGCTGGTGGTGCTTTTAGTTATCTCAGAGTGACTTTTGGAGAATTTGTAGGTTATTTTGCTGGGGCAAATATACTCATGGAGTATGTATTGTCAAATGCTGCTGTGGCAAGGAGTTTTACTGAGTATTTATCCTCTGCATTTGGAGAAGATGATCCGAGGACATGGAGAGTAGAAGTGGATGGGTTAGTAAAGGGCTATAATACGTTGGACTTCCCAGCTGTTGCTCTTATTCTACTTCTCACTTTCTGCCTTTGCCATAGCACAAAGGAAAGCTCCACACTGAACCTTGTTATGACGGTGTTTCATGTGGTGTTCTTTGGATTTATTATAATTGCTGGTTTCTGCATTGGGAGCCCCAACAACTTGGTGAAGCCTAAGGGACTAGCGCCTTTTGGTGTTAGAGGAGTTCTTGATGGGGCAGCTATAGTTTATTTCAGTTACATCGGCTACGATTCAGCTTCAACCATGGCCGAAGAGATCCAAAACCCTTCGCAGAGCCTGCCCGTCGGCATCATTGGTTCCGTTGTCATTACCTCCATGCTTTATTGCCTTATGGCCTTGTCCTTGTGTTTGATGGTTCCTTACAACAAGATATCAGAGAAAATATCATTTTCAGTGGCTTTCAGACAGATTGGTTGGGACTGGGCAAGTAACGTGGTTGGGGCTGGTGCAAGCTTGGGGATTGTTGCTTCACTCTTGGTTGCCATGTTAGGCCAAGCCAGGTACCTTTGTGTTATTGGAAGGGCGCGGCTAGTGCCATCCTGGTTAGCCAAGGTGCATCCTTCAACAGGCACTCCACTGAATGCCACACTCTTCCTGGGACTCTGCACAGCATCAATTGCACTCTTCACCGACCTCGAAATAGTGATTGAAATGATCTCCATCGGCACCCTCTTGGTGTTCTACCTTGTGGCCAATGCTCTCATTTATCGTCGATATGTGATCATCACCAACAACCCCCCATTTCAAACTCTCTTGTTCCTCTTCCTCCTTTCATCTAGTGCCATCGGCTTTTCCGTGTCCTGGAAGCTTAACCAACAACGCTGGGGGTTACCGCTTTTTGGAATGTCAACAGTTACCATCATTGCCTTCTTCAACTACATGGTACCTTGTGTTTGCCATCCCACTGGGTGGTCGATGCCATTCATGCCATGGCCGGCTGCACTATCTATCTTCCTTAATGTGTTTCTCATGACCACGCTAAAGAAGTTCTCATTCGAAAGGTTTGCCATATGGGCATGTTTCATAACATTGTTCTATCTATTGTATGGTGTTCACTCGACTTATAAGGCAGAGGAGAGGGAGAGTACTGGTGTTGATGAAGTGAATCCAAGCTCAGCAGTGCAACAAATAAAGCTAGATATTCAAGTAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0008150 GO:0008509 GO:0008514 GO:0009605 GO:0009607 GO:0009624 GO:0015075 GO:0015171 GO:0015318 GO:0015711 GO:0015849 GO:0016020 GO:0022857 GO:0034220 GO:0043207 GO:0044464 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0098656 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

545

Amino Acids

60.03

Weight (kDa)

8.66

Isoelectric Point (pI)

35.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease	PF00324	82 - 395	2.1e-17	Amino acid permease
AA_permease_2	PF13520	88 - 470	9.1e-39	Amino acid permease
AA_permease_C	PF13906	465 - 514	3.2e-10	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003422)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10600 AT3G10600 AT5G04770 AT5G04770 AT5G04770
fragaria_vesca	FvH4_5g20380 FvH4_5g20380 FvH4_7g05050
malus_domestica	MD02G1259000.v1.1 MD04G1055400.v1.1 MD06G1047000.v1.1
prunus_persica	Prupe.2G071100_v2.0.a1 Prupe.2G071100_v2.0.a1 Prupe.5G055200_v2.0.a1
pyrus_communis	pycom02g22020 pycom04g04840
rosa_chinensis	RchiOBHm_Chr1g0331741 RchiOBHm_Chr7g0205641
rosa_laevigata	RLG00000003368 RLG00000029718
rosa_multiflora	Rmu_sc0006124.1_g000001 Rmu_ssc0000089.1_g000013
rosa_roxburghii	Rroxscaffold_3G00252110 Rroxscaffold_4G00318820
rosa_rugosa	Rorug01G0095900 Rorug01G0096000 Rorug07G0092300 Rorug07G0092300
rosa_samantha	Rh1BG091400 Rh1DG125300 Rh7AG223200 Rh7BG218200 Rh7CG236500 Rh7DG230200
rosa_wichuraiana	Rw1G009690 Rw7G019250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	590, 1548
Acc65I	GGTACC	2 cut(s)	984, 1366
AccB1I	GGYRCC	3 cut(s)	984, 1148, 1366
AccB7I	CCANNNNNTGG	1 cut(s)	1392
AccII	CGCG	1 cut(s)	1009
AciI	CCGC	2 cut(s)	1009, 1316
AclWI	GGATC	2 cut(s)	407, 733
AcoI	YGGCCR	3 cut(s)	729, 1173, 1415
AcsI	RAATTY	1 cut(s)	302
AdeI	CACNNNGTG	1 cut(s)	1392
AfaI	GTAC	3 cut(s)	986, 1368, 1570
AfiI	CCNNNNNNNGG	5 cut(s)	139, 1049, 1284, 1322, 1392
AgsI	TTSAA	6 cut(s)	723, 1047, 1133, 1229, 1357, 1628
AjnI	CCWGG	6 cut(s)	125, 138, 980, 1022, 1077, 1283
AluBI	AGCT	9 cut(s)	145, 479, 534, 683, 719, 936, 1291, 1596, 1618
AluI	AGCT	9 cut(s)	145, 479, 534, 683, 719, 936, 1291, 1596, 1618
Alw21I	GWGCWC	1 cut(s)	147
AlwI	GGATC	2 cut(s)	407, 733
AlwNI	CAGNNNCTG	3 cut(s)	173, 263, 760
AoxI	GGCC	5 cut(s)	729, 816, 973, 1173, 1415
ApeKI	GCWGC	3 cut(s)	359, 680, 1421
ApoI	RAATTY	1 cut(s)	302
Asp718I	GGTACC	2 cut(s)	984, 1366
AspLEI	GCGC	2 cut(s)	649, 1009
AspS9I	GGNCC	1 cut(s)	129
AsuHPI	GGTGA	3 cut(s)	640, 1102, 1201
AsuII	TTCGAA	1 cut(s)	1479
AvaII	GGWCC	1 cut(s)	129
AxyI	CCTNAGG	1 cut(s)	636
BaeI	ACNNNNGTAYC	2 cut(s)	976, 1009
BalI	TGGCCA	1 cut(s)	1175
BanI	GGYRCC	3 cut(s)	984, 1148, 1366
BanII	GRGCYC	2 cut(s)	147, 617
Bbv12I	GWGCWC	1 cut(s)	147
BbvI	GCAGC	3 cut(s)	346, 692, 1408
BccI	CCATC	8 cut(s)	434, 668, 829, 1027, 1151, 1274, 1349, 1389
BcgI	CGANNNNNNTGC	2 cut(s)	1469, 1503
BciT130I	CCWGG	6 cut(s)	127, 140, 982, 1024, 1079, 1285
BclI	TGATCA	1 cut(s)	1203
BfaI	CTAG	4 cut(s)	644, 1013, 1260, 1619
BfmI	CTRYAG	1 cut(s)	684
BfoI	RGCGCY	1 cut(s)	650
BglI	GCCNNNNNGGC	1 cut(s)	1496
BisI	GCNGC	4 cut(s)	360, 681, 1010, 1422
BlpI	GCTNAGC	1 cut(s)	1597
BlsI	GCNGC	4 cut(s)	361, 682, 1011, 1423
BmcAI	AGTACT	1 cut(s)	1570
Bme1390I	CCNGG	6 cut(s)	127, 140, 982, 1024, 1079, 1285
Bme18I	GGWCC	1 cut(s)	129
BmgT120I	GGNCC	1 cut(s)	129
BmiI	GGNNCC	7 cut(s)	131, 614, 781, 840, 986, 1150, 1368
BmrFI	CCNGG	6 cut(s)	127, 140, 982, 1024, 1079, 1285
BmrI	ACTGGG	2 cut(s)	913, 1398
BmsI	GCATC	4 cut(s)	780, 1048, 1103, 1389
BmuI	ACTGGG	2 cut(s)	913, 1398
Bpu1102I	GCTNAGC	1 cut(s)	1597
Bpu14I	TTCGAA	1 cut(s)	1479
BpuEI	CTTGAG	1 cut(s)	176
BsaBI	GATNNNNATC	1 cut(s)	1142
BsaJI	CCNNGG	5 cut(s)	416, 726, 1032, 1078, 1412
BsaXI	ACNNNNNCTCC	8 cut(s)	13, 43, 234, 264, 291, 321, 1039, 1069
Bsc4I	CCNNNNNNNGG	5 cut(s)	139, 1049, 1284, 1322, 1392
Bse118I	RCCGGY	1 cut(s)	1417
Bse1I	ACTGG	4 cut(s)	51, 908, 1393, 1576
Bse21I	CCTNAGG	1 cut(s)	636
Bse3DI	GCAATG	1 cut(s)	1344
Bse8I	GATNNNNATC	1 cut(s)	1142
BseBI	CCWGG	6 cut(s)	127, 140, 982, 1024, 1079, 1285
BseDI	CCNNGG	5 cut(s)	416, 726, 1032, 1078, 1412
BseGI	GGATG	4 cut(s)	445, 1019, 1039, 1381
BseJI	GATNNNNATC	1 cut(s)	1142
BseLI	CCNNNNNNNGG	5 cut(s)	139, 1049, 1284, 1322, 1392
BseMI	GCAATG	1 cut(s)	1344
BseMII	CTCAG	4 cut(s)	118, 298, 372, 1611
BseNI	ACTGG	4 cut(s)	51, 908, 1393, 1576
BseRI	GAGGAG	3 cut(s)	21, 678, 1571
BseXI	GCAGC	3 cut(s)	346, 692, 1408
BseYI	CCCAGC	3 cut(s)	320, 475, 1305
BsgI	GTGCAG	2 cut(s)	1072, 1407
Bsh1236I	CGCG	1 cut(s)	1009
BshFI	GGCC	5 cut(s)	731, 818, 975, 1175, 1417
BshNI	GGYRCC	3 cut(s)	984, 1148, 1366
BsiHKAI	GWGCWC	1 cut(s)	147
BsiSI	CCGG	1 cut(s)	1418
BslFI	GGGAC	4 cut(s)	70, 654, 914, 1095
BslI	CCNNNNNNNGG	5 cut(s)	139, 1049, 1284, 1322, 1392
BsmFI	GGGAC	4 cut(s)	70, 654, 914, 1095
BsmI	GAATGC	2 cut(s)	120, 1069
BsnI	GGCC	5 cut(s)	731, 818, 975, 1175, 1417
Bsp119I	TTCGAA	1 cut(s)	1479
Bsp1286I	GDGCHC	2 cut(s)	147, 617
Bsp143I	GATC	5 cut(s)	202, 412, 738, 1137, 1203
Bsp1720I	GCTNAGC	1 cut(s)	1597
Bsp19I	CCATGG	2 cut(s)	726, 1412
BspACI	CCGC	2 cut(s)	1009, 1316
BspANI	GGCC	5 cut(s)	731, 818, 975, 1175, 1417
BspCNI	CTCAG	4 cut(s)	117, 297, 373, 1610
BspFNI	CGCG	1 cut(s)	1009
BspHI	TCATGA	1 cut(s)	1452
BspLI	GGNNCC	7 cut(s)	131, 614, 781, 840, 986, 1150, 1368
BspPI	GGATC	2 cut(s)	407, 733
BspT104I	TTCGAA	1 cut(s)	1479
BspT107I	GGYRCC	3 cut(s)	984, 1148, 1366
BsrDI	GCAATG	1 cut(s)	1344
BsrFI	RCCGGY	1 cut(s)	1417
BsrI	ACTGG	4 cut(s)	51, 908, 1393, 1576
BssAI	RCCGGY	1 cut(s)	1417
BssECI	CCNNGG	5 cut(s)	416, 726, 1032, 1078, 1412
BssMI	GATC	5 cut(s)	202, 412, 738, 1137, 1203
BssT1I	CCWWGG	3 cut(s)	726, 1032, 1412
Bst2UI	CCWGG	6 cut(s)	127, 140, 982, 1024, 1079, 1285
Bst4CI	ACNGT	3 cut(s)	259, 559, 1336
Bst6I	CTCTTC	5 cut(s)	176, 729, 1079, 1112, 1250
BstAPI	GCANNNNNTGC	2 cut(s)	760, 1100
BstBI	TTCGAA	1 cut(s)	1479
BstC8I	GCNNGC	5 cut(s)	120, 230, 761, 934, 1419
BstDEI	CTNAG	5 cut(s)	104, 284, 381, 636, 1597
BstDSI	CCRYGG	2 cut(s)	726, 1412
BstEII	GGTNACC	1 cut(s)	1311
BstENI	CCTNNNNNAGG	1 cut(s)	1047
BstF5I	GGATG	4 cut(s)	445, 1019, 1039, 1381
BstFNI	CGCG	1 cut(s)	1009
BstH2I	RGCGCY	1 cut(s)	650
BstHHI	GCGC	2 cut(s)	649, 1009
BstKTI	GATC	5 cut(s)	205, 415, 741, 1140, 1206
BstMBI	GATC	5 cut(s)	202, 412, 738, 1137, 1203
BstMWI	GCNNNNNNNGC	9 cut(s)	234, 269, 365, 612, 760, 1015, 1100, 1408, 1496
BstNI	CCWGG	6 cut(s)	127, 140, 982, 1024, 1079, 1285
BstNSI	RCATGY	2 cut(s)	232, 1503
BstPI	GGTNACC	1 cut(s)	1311
BstSCI	CCNGG	6 cut(s)	125, 138, 980, 1022, 1077, 1283
BstSFI	CTRYAG	1 cut(s)	684
BstUI	CGCG	1 cut(s)	1009
BstV1I	GCAGC	3 cut(s)	346, 692, 1408
BstX2I	RGATCY	1 cut(s)	738
BstXI	CCANNNNNNTGG	2 cut(s)	625, 1388
BstYI	RGATCY	1 cut(s)	738
Bsu36I	CCTNAGG	1 cut(s)	636
BsuRI	GGCC	5 cut(s)	731, 818, 975, 1175, 1417
BtgI	CCRYGG	2 cut(s)	726, 1412
BtsCI	GGATG	4 cut(s)	445, 1019, 1039, 1381
BtsI	GCAGTG	1 cut(s)	1608
BtsIMutI	CAGTG	5 cut(s)	539, 882, 1058, 1386, 1608
Cac8I	GCNNGC	5 cut(s)	120, 230, 761, 934, 1419
CaiI	CAGNNNCTG	3 cut(s)	173, 263, 760
CciI	TCATGA	1 cut(s)	1452
CfoI	GCGC	2 cut(s)	649, 1009
Cfr10I	RCCGGY	1 cut(s)	1417
Cfr13I	GGNCC	1 cut(s)	129
Csp6I	GTAC	3 cut(s)	985, 1367, 1569
CspCI	CAANNNNNGTGG	2 cut(s)	897, 932
CviQI	GTAC	3 cut(s)	985, 1367, 1569
DdeI	CTNAG	5 cut(s)	104, 284, 381, 636, 1597
DpnI	GATC	5 cut(s)	204, 414, 740, 1139, 1205
DpnII	GATC	5 cut(s)	202, 412, 738, 1137, 1203
DraIII	CACNNNGTG	1 cut(s)	1392
EaeI	YGGCCR	3 cut(s)	729, 1173, 1415
Eam1104I	CTCTTC	5 cut(s)	176, 729, 1079, 1112, 1250
EarI	CTCTTC	5 cut(s)	176, 729, 1079, 1112, 1250
Ecl136II	GAGCTC	1 cut(s)	145
Eco130I	CCWWGG	3 cut(s)	726, 1032, 1412
Eco24I	GRGCYC	2 cut(s)	147, 617
Eco32I	GATATC	1 cut(s)	855
Eco47I	GGWCC	1 cut(s)	129
Eco53kI	GAGCTC	1 cut(s)	145
Eco81I	CCTNAGG	1 cut(s)	636
Eco91I	GGTNACC	1 cut(s)	1311
EcoICRI	GAGCTC	1 cut(s)	145
EcoNI	CCTNNNNNAGG	1 cut(s)	1047
EcoO65I	GGTNACC	1 cut(s)	1311
EcoRII	CCWGG	6 cut(s)	125, 138, 980, 1022, 1077, 1283
EcoRV	GATATC	1 cut(s)	855
EcoT14I	CCWWGG	3 cut(s)	726, 1032, 1412
EcoT38I	GRGCYC	2 cut(s)	147, 617
ErhI	CCWWGG	3 cut(s)	726, 1032, 1412
FaqI	GGGAC	4 cut(s)	70, 654, 914, 1095
FauNDI	CATATG	1 cut(s)	1493
FbaI	TGATCA	1 cut(s)	1203
Fnu4HI	GCNGC	4 cut(s)	360, 681, 1010, 1422
FokI	GGATG	4 cut(s)	452, 1006, 1026, 1368
FriOI	GRGCYC	2 cut(s)	147, 617
Fsp4HI	GCNGC	4 cut(s)	360, 681, 1010, 1422
FspBI	CTAG	4 cut(s)	644, 1013, 1260, 1619
GlaI	GCGC	2 cut(s)	648, 1008
GluI	GCNGC	4 cut(s)	360, 681, 1010, 1422
GsaI	CCCAGC	3 cut(s)	324, 479, 1309
HaeII	RGCGCY	1 cut(s)	650
HaeIII	GGCC	5 cut(s)	731, 818, 975, 1175, 1417
HapII	CCGG	1 cut(s)	1418
HhaI	GCGC	2 cut(s)	649, 1009
Hin6I	GCGC	2 cut(s)	647, 1007
HinP1I	GCGC	2 cut(s)	647, 1007
HincII	GTYRAC	1 cut(s)	1332
HindII	GTYRAC	1 cut(s)	1332
HindIII	AAGCTT	2 cut(s)	934, 1289
HinfI	GANTC	4 cut(s)	243, 713, 1083, 1588
HpaII	CCGG	1 cut(s)	1418
HphI	GGTGA	3 cut(s)	640, 1102, 1201
Hpy166II	GTNNAC	2 cut(s)	1332, 1537
Hpy188I	TCNGA	5 cut(s)	107, 287, 417, 859, 887
Hpy188III	TCNNGA	2 cut(s)	671, 1453
Hpy8I	GTNNAC	2 cut(s)	1332, 1537
Hpy99I	CGWCG	2 cut(s)	770, 1197
HpyAV	CCTTC	4 cut(s)	759, 996, 1053, 1360
HpyCH4III	ACNGT	3 cut(s)	259, 559, 1336
HpyCH4IV	ACGT	2 cut(s)	464, 915
HpyCH4V	TGCA	8 cut(s)	398, 606, 932, 1039, 1089, 1103, 1424, 1606
HpyF10VI	GCNNNNNNNGC	9 cut(s)	234, 269, 365, 612, 760, 1015, 1100, 1408, 1496
HpyF3I	CTNAG	5 cut(s)	104, 284, 381, 636, 1597
HpySE526I	ACGT	2 cut(s)	464, 915
HspAI	GCGC	2 cut(s)	647, 1007
KpnI	GGTACC	2 cut(s)	988, 1370
KroI	GCCGGC	1 cut(s)	1417
KroNI	GCCGGC	1 cut(s)	1419
Ksp22I	TGATCA	1 cut(s)	1203
Kzo9I	GATC	5 cut(s)	202, 412, 738, 1137, 1203
LmnI	GCTCC	3 cut(s)	142, 539, 612
Lsp1109I	GCAGC	3 cut(s)	346, 692, 1408
LweI	GCATC	4 cut(s)	780, 1048, 1103, 1389
MaeI	CTAG	4 cut(s)	644, 1013, 1260, 1619
MaeII	ACGT	2 cut(s)	464, 915
MaeIII	GTNAC	6 cut(s)	250, 289, 698, 911, 1311, 1336
MalI	GATC	5 cut(s)	204, 414, 740, 1139, 1205
MboI	GATC	5 cut(s)	202, 412, 738, 1137, 1203
MboII	GAAGA	8 cut(s)	193, 419, 746, 1066, 1099, 1237, 1345, 1426
MfeI	CAATTG	1 cut(s)	1098
MflI	RGATCY	1 cut(s)	738
MhlI	GDGCHC	2 cut(s)	147, 617
MlsI	TGGCCA	1 cut(s)	1175
MluCI	AATT	3 cut(s)	302, 591, 1098
MluNI	TGGCCA	1 cut(s)	1175
MlyI	GAGTC	2 cut(s)	252, 1077
MmeI	TCCRAC	4 cut(s)	90, 202, 220, 447
Mox20I	TGGCCA	1 cut(s)	1175
MroNI	GCCGGC	1 cut(s)	1417
MscI	TGGCCA	1 cut(s)	1175
MseI	TTAA	2 cut(s)	1293, 1440
Msp20I	TGGCCA	1 cut(s)	1175
MspA1I	CMGCKG	1 cut(s)	479
MspI	CCGG	1 cut(s)	1418
MspR9I	CCNGG	6 cut(s)	127, 140, 982, 1024, 1079, 1285
MunI	CAATTG	1 cut(s)	1098
Mva1269I	GAATGC	2 cut(s)	120, 1069
MvaI	CCWGG	6 cut(s)	127, 140, 982, 1024, 1079, 1285
MvnI	CGCG	1 cut(s)	1009
MwoI	GCNNNNNNNGC	9 cut(s)	234, 269, 365, 612, 760, 1015, 1100, 1408, 1496
NaeI	GCCGGC	1 cut(s)	1419
NcoI	CCATGG	2 cut(s)	726, 1412
NdeI	CATATG	1 cut(s)	1493
NdeII	GATC	5 cut(s)	202, 412, 738, 1137, 1203
NgoMIV	GCCGGC	1 cut(s)	1417
NlaIV	GGNNCC	7 cut(s)	131, 614, 781, 840, 986, 1150, 1368
NmuCI	GTSAC	2 cut(s)	250, 289
NspI	RCATGY	2 cut(s)	232, 1503
NspV	TTCGAA	1 cut(s)	1479
PaeI	GCATGC	1 cut(s)	232
PagI	TCATGA	1 cut(s)	1452
PcsI	WCGNNNNNNNCGW	1 cut(s)	1275
PctI	GAATGC	2 cut(s)	120, 1069
PdiI	GCCGGC	1 cut(s)	1419
PfeI	GAWTC	2 cut(s)	713, 1588
PflMI	CCANNNNNTGG	1 cut(s)	1392
PfoI	TCCNGGA	1 cut(s)	1283
PkrI	GCNGC	4 cut(s)	361, 682, 1011, 1423
PleI	GAGTC	2 cut(s)	251, 1077
PpsI	GAGTC	2 cut(s)	251, 1077
PsiI	TTATAA	2 cut(s)	590, 1548
Psp124BI	GAGCTC	1 cut(s)	147
Psp6I	CCWGG	6 cut(s)	125, 138, 980, 1022, 1077, 1283
PspEI	GGTNACC	1 cut(s)	1311
PspFI	CCCAGC	3 cut(s)	320, 475, 1305
PspGI	CCWGG	6 cut(s)	125, 138, 980, 1022, 1077, 1283
PspN4I	GGNNCC	7 cut(s)	131, 614, 781, 840, 986, 1150, 1368
PspPI	GGNCC	1 cut(s)	129
PstNI	CAGNNNCTG	3 cut(s)	173, 263, 760
PsuI	RGATCY	1 cut(s)	738
PvuII	CAGCTG	1 cut(s)	479
RsaI	GTAC	3 cut(s)	986, 1368, 1570
RsaNI	GTAC	3 cut(s)	985, 1367, 1569
SacI	GAGCTC	1 cut(s)	147
SaqAI	TTAA	2 cut(s)	1293, 1440
SatI	GCNGC	4 cut(s)	360, 681, 1010, 1422
Sau3AI	GATC	5 cut(s)	202, 412, 738, 1137, 1203
Sau96I	GGNCC	1 cut(s)	129
ScaI	AGTACT	1 cut(s)	1570
SchI	GAGTC	2 cut(s)	252, 1077
ScrFI	CCNGG	6 cut(s)	127, 140, 982, 1024, 1079, 1285
SduI	GDGCHC	2 cut(s)	147, 617
SfaNI	GCATC	4 cut(s)	780, 1048, 1103, 1389
SfcI	CTRYAG	1 cut(s)	684
SfuI	TTCGAA	1 cut(s)	1479
SinI	GGWCC	1 cut(s)	129
SmlI	CTYRAG	1 cut(s)	191
SmoI	CTYRAG	1 cut(s)	191
SphI	GCATGC	1 cut(s)	232
Sse9I	AATT	3 cut(s)	302, 591, 1098
SsiI	CCGC	2 cut(s)	1009, 1316
SspMI	CTAG	4 cut(s)	644, 1013, 1260, 1619
SstI	GAGCTC	1 cut(s)	147
StyD4I	CCNGG	6 cut(s)	125, 138, 980, 1022, 1077, 1283
StyI	CCWWGG	3 cut(s)	726, 1032, 1412
TaaI	ACNGT	3 cut(s)	259, 559, 1336
TaiI	ACGT	2 cut(s)	467, 918
TaqI	TCGA	5 cut(s)	1119, 1195, 1397, 1479, 1541
TasI	AATT	3 cut(s)	302, 591, 1098
TatI	WGTACW	1 cut(s)	1568
TauI	GCSGC	1 cut(s)	1012
TfiI	GAWTC	2 cut(s)	713, 1588
Tru1I	TTAA	2 cut(s)	1293, 1440
Tru9I	TTAA	2 cut(s)	1293, 1440
TscAI	CASTG	5 cut(s)	546, 882, 1065, 1393, 1608
TseFI	GTSAC	2 cut(s)	250, 289
TseI	GCWGC	3 cut(s)	359, 680, 1421
Tsp45I	GTSAC	2 cut(s)	250, 289
TspDTI	ATGAA	6 cut(s)	194, 554, 1245, 1396, 1495, 1596
TspGWI	ACGGA	2 cut(s)	772, 1267
TspRI	CASTG	5 cut(s)	546, 882, 1065, 1393, 1608
Van91I	CCANNNNNTGG	1 cut(s)	1392
VpaK11BI	GGWCC	1 cut(s)	129
XagI	CCTNNNNNAGG	1 cut(s)	1047
XapI	RAATTY	1 cut(s)	302
XceI	RCATGY	2 cut(s)	232, 1503
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1075, 1410
XspI	CTAG	4 cut(s)	644, 1013, 1260, 1619
ZrmI	AGTACT	1 cut(s)	1570

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.