Prupe.5G117600_v2.0.a1
ERF Family

Pectate lyase superfamily protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
11899547 .. 11904050
4504 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G117600.2

Sequence Viewer

Length: 1329 bp
ATGGGTTATCTCTGGTTTTCCCTTTCGATTTTCCTCTGCCTCAGCTACTTCTCAGTGGCGGAAGTGGTAACTTGCTCTGGGATAGTGCCCATGCGGTACCGAAACGACAAGATATCGATAACGGATTTCGGAGGCGTAGGCGACGGCGTTACATTGAACACCAAGGCGTTTCGGGAAGCGATATATCGAATTGAGCATTTGAAGAGGAGAGGAGGCACGCTTCTTTACATACCTCCTGGGGTCTACTTAACAGAGAGCTTCAATCTCACAAGCCACATGACTCTTTATTTGGCCAAGGGTGCTGTTATCAAAGCCACCCAGGATACTAGGAATTGGCCGCTGATTGCTCCTTTGCCATCTTATGGAAGAGGGAGGGAGCTTCCTGGAGGGAGGTATTCGAGCTTTATTCATGGGGATGGAATCCATGATGTGGTTATCACTGGTGAAAATGGAACAATCGATGGCCAAGGGGGTGTATGGTGGAACATGTGGAGGCAAAGAACTCTTCAGTTTACTAGACCAAATCTCATTGAATTCATGAACTCGAAAAACATTATCATTTCCAATGTGATTTTCCAGAACTCTCCCTTTTGGAACATTCACCCTGTTTATTGCAGCAACGTTGTTGTCCGGTATGTCACAATTTTGGCTCCATATGACTCTCCCAACACTGATGGAGTTGATCCAGATTCAAGCTCTAATGTCTGCATAGAGGACTCATACATATCTACTGGAGACGATCTTGTGGCTGTAAAGAGCGGATGGGACGAGTACGGGATCGCTTATGGCCGCCCTAGTTCGGGCATTACCATCCGCCGTGTTAGAGGATCATCCCCATTTGCTGGAATTGCGATCGGAAGTGAAACCTCTGGTGGGGTGGAGAATGTCTTGGCTGAACACATAAACCTTTACAACATGGGAGTTGGCATCCACATCAAAACAAACATCGGCCGGGGAGGGTTCATAAGAAACATCACAGTTTCAGACGTGTACATGGAAGAAGTCCGAAGGGGAATAAAGATAGCAGGAGATGTTGGAGACCACCCAGATGACAAATACAACCAAAATGCTCTCCCAGTCGTTAAGGGCATCACATTGAAGGACATTTGGGGAGTGCAGGTTCAGCAGGCCGGCGTAATACTAGGTCTGAAGAACTCCCCGTTCACCGGAATCTGTCTCTCCAACATCAATCTCCACGGCATGACAGGATCAAGATCGCCACCCTGGAAGTGCTCGGACATTAGTGGGGCCGCCCATCTGGTTAGCCCTTTACAGTGCTCAGAGCTGAGCGGTGCCCAGCAAGCATCTACATGCTCCAACTACTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

443

Amino Acids

48.32

Weight (kDa)

7.12

Isoelectric Point (pI)

41.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1108
Acc65I GGTACC 1 cut(s) 96
AccB1I GGYRCC 2 cut(s) 96, 1292
AccB7I CCANNNNNTGG 3 cut(s) 362, 430, 842
AccBSI CCGCTC 2 cut(s) 759, 1290
AccI GTMKAC 1 cut(s) 243
AciI CCGC 8 cut(s) 59, 94, 338, 759, 790, 814, 1251, 1290
AclI AACGTT 1 cut(s) 621
AclWI GGATC 4 cut(s) 677, 785, 835, 1216
AcoI YGGCCR 5 cut(s) 291, 335, 463, 787, 949
AcsI RAATTY 1 cut(s) 533
AcuI CTGAAG 2 cut(s) 491, 1169
AfaI GTAC 3 cut(s) 98, 773, 992
AfiI CCNNNNNNNGG 7 cut(s) 362, 430, 799, 800, 842, 873, 1166
AflIII ACRYGT 2 cut(s) 486, 987
AgsI TTSAA 6 cut(s) 157, 202, 262, 533, 693, 1099
AjiI CACGTC 1 cut(s) 988
AjnI CCWGG 4 cut(s) 235, 318, 382, 1223
AjuI GAANNNNNNNTTGG 2 cut(s) 557, 589
AloI GAACNNNNNNTCC 2 cut(s) 1104, 1136
AluBI AGCT 6 cut(s) 45, 258, 379, 402, 696, 1285
AluI AGCT 6 cut(s) 45, 258, 379, 402, 696, 1285
Alw21I GWGCWC 2 cut(s) 1235, 1280
Alw26I GTCTC 3 cut(s) 729, 1032, 1181
AlwI GGATC 4 cut(s) 677, 785, 835, 1216
AoxI GGCC 7 cut(s) 291, 335, 463, 787, 949, 1128, 1248
ApeKI GCWGC 1 cut(s) 615
ApoI RAATTY 1 cut(s) 533
ArsI GACNNNNNNTTYG 2 cut(s) 271, 303
Asp718I GGTACC 1 cut(s) 96
AspS9I GGNCC 1 cut(s) 1248
AsuC2I CCSGG 1 cut(s) 953
AsuHPI GGTGA 3 cut(s) 455, 593, 1156
BaeGI GKGCMC 2 cut(s) 90, 1297
BalI TGGCCA 2 cut(s) 293, 465
BanI GGYRCC 2 cut(s) 96, 1292
Bbv12I GWGCWC 2 cut(s) 1235, 1280
BbvCI CCTCAGC 1 cut(s) 41
BbvI GCAGC 1 cut(s) 627
BccI CCATC 7 cut(s) 364, 410, 455, 668, 756, 818, 1263
BceAI ACGGC 3 cut(s) 160, 801, 1213
BciT130I CCWGG 4 cut(s) 237, 320, 384, 1225
BciVI GTATCC 1 cut(s) 316
BcnI CCSGG 1 cut(s) 953
BcoDI GTCTC 3 cut(s) 729, 1032, 1181
BfaI CTAG 4 cut(s) 327, 516, 795, 1142
BfuAI ACCTGC 1 cut(s) 1108
BfuI GTATCC 1 cut(s) 316
BisI GCNGC 4 cut(s) 338, 616, 790, 1251
BlpI GCTNAGC 1 cut(s) 1286
BlsI GCNGC 4 cut(s) 339, 617, 791, 1252
Bme1390I CCNGG 5 cut(s) 237, 320, 384, 953, 1225
BmgBI CACGTC 1 cut(s) 988
BmgT120I GGNCC 1 cut(s) 1248
BmiI GGNNCC 4 cut(s) 98, 651, 1249, 1294
BmrFI CCNGG 5 cut(s) 237, 320, 384, 953, 1225
BmrI ACTGGG 1 cut(s) 1070
BmsI GCATC 3 cut(s) 936, 1098, 1313
BmuI ACTGGG 1 cut(s) 1070
BpmI CTGGAG 2 cut(s) 405, 753
Bpu10I CCTNAGC 1 cut(s) 41
Bpu1102I GCTNAGC 1 cut(s) 1286
BpuMI CCSGG 1 cut(s) 953
Bsa29I ATCGAT 2 cut(s) 116, 459
BsaBI GATNNNNATC 1 cut(s) 1213
BsaI GGTCTC 1 cut(s) 1032
BsaJI CCNNGG 8 cut(s) 162, 236, 294, 318, 466, 952, 1195, 1223
BsaWI WCCGGW 2 cut(s) 630, 1166
BsaXI ACNNNNNCTCC 2 cut(s) 1104, 1134
Bsc4I CCNNNNNNNGG 7 cut(s) 362, 430, 799, 800, 842, 873, 1166
Bse118I RCCGGY 1 cut(s) 1130
Bse1I ACTGG 3 cut(s) 445, 736, 1076
Bse8I GATNNNNATC 1 cut(s) 1213
BseBI CCWGG 4 cut(s) 237, 320, 384, 1225
BseCI ATCGAT 2 cut(s) 116, 459
BseDI CCNNGG 8 cut(s) 162, 236, 294, 318, 466, 952, 1195, 1223
BseGI GGATG 5 cut(s) 421, 767, 810, 830, 927
BseJI GATNNNNATC 1 cut(s) 1213
BseLI CCNNNNNNNGG 7 cut(s) 362, 430, 799, 800, 842, 873, 1166
BseMII CTCAG 4 cut(s) 55, 66, 1277, 1293
BseNI ACTGG 3 cut(s) 445, 736, 1076
BseRI GAGGAG 2 cut(s) 220, 225
BseSI GKGCMC 2 cut(s) 90, 1297
BseX3I CGGCCG 1 cut(s) 949
BseXI GCAGC 1 cut(s) 627
BseYI CCCAGC 1 cut(s) 1296
BsgI GTGCAG 1 cut(s) 1136
Bsh1285I CGRYCG 2 cut(s) 855, 952
BshFI GGCC 7 cut(s) 293, 337, 465, 789, 951, 1130, 1250
BshNI GGYRCC 2 cut(s) 96, 1292
BshVI ATCGAT 2 cut(s) 116, 459
BsiEI CGRYCG 2 cut(s) 855, 952
BsiHKAI GWGCWC 2 cut(s) 1235, 1280
BsiSI CCGG 4 cut(s) 631, 952, 1131, 1167
BslFI GGGAC 1 cut(s) 779
BslI CCNNNNNNNGG 7 cut(s) 362, 430, 799, 800, 842, 873, 1166
BsmAI GTCTC 3 cut(s) 729, 1032, 1181
BsmBI CGTCTC 1 cut(s) 729
BsmFI GGGAC 1 cut(s) 779
BsnI GGCC 7 cut(s) 293, 337, 465, 789, 951, 1130, 1250
Bso31I GGTCTC 1 cut(s) 1032
Bsp1286I GDGCHC 4 cut(s) 90, 1235, 1280, 1297
Bsp1407I TGTACA 1 cut(s) 990
Bsp143I GATC 7 cut(s) 682, 739, 777, 827, 852, 1208, 1214
Bsp1720I GCTNAGC 1 cut(s) 1286
BspACI CCGC 8 cut(s) 59, 94, 338, 759, 790, 814, 1251, 1290
BspANI GGCC 7 cut(s) 293, 337, 465, 789, 951, 1130, 1250
BspCNI CTCAG 4 cut(s) 54, 65, 1278, 1292
BspDI ATCGAT 2 cut(s) 116, 459
BspHI TCATGA 1 cut(s) 537
BspLI GGNNCC 4 cut(s) 98, 651, 1249, 1294
BspMI ACCTGC 1 cut(s) 1108
BspPI GGATC 4 cut(s) 677, 785, 835, 1216
BspT107I GGYRCC 2 cut(s) 96, 1292
BspTNI GGTCTC 1 cut(s) 1032
BsrBI CCGCTC 2 cut(s) 759, 1290
BsrFI RCCGGY 1 cut(s) 1130
BsrGI TGTACA 1 cut(s) 990
BsrI ACTGG 3 cut(s) 445, 736, 1076
BssAI RCCGGY 1 cut(s) 1130
BssECI CCNNGG 8 cut(s) 162, 236, 294, 318, 466, 952, 1195, 1223
BssMI GATC 7 cut(s) 682, 739, 777, 827, 852, 1208, 1214
BssT1I CCWWGG 3 cut(s) 162, 294, 466
Bst2UI CCWGG 4 cut(s) 237, 320, 384, 1225
Bst4CI ACNGT 2 cut(s) 979, 1275
Bst6I CTCTTC 3 cut(s) 197, 361, 510
BstAUI TGTACA 1 cut(s) 990
BstC8I GCNNGC 4 cut(s) 218, 1128, 1132, 1302
BstDEI CTNAG 4 cut(s) 41, 52, 1279, 1286
BstDSI CCRYGG 1 cut(s) 1195
BstF5I GGATG 5 cut(s) 421, 767, 810, 830, 927
BstKTI GATC 7 cut(s) 685, 742, 780, 830, 855, 1211, 1217
BstMAI GTCTC 3 cut(s) 729, 1032, 1181
BstMBI GATC 7 cut(s) 682, 739, 777, 827, 852, 1208, 1214
BstMCI CGRYCG 2 cut(s) 855, 952
BstMWI GCNNNNNNNGC 4 cut(s) 299, 848, 1123, 1301
BstNI CCWGG 4 cut(s) 237, 320, 384, 1225
BstNSI RCATGY 2 cut(s) 490, 1314
BstSCI CCNGG 5 cut(s) 235, 318, 382, 951, 1223
BstSLI GKGCMC 2 cut(s) 90, 1297
BstV1I GCAGC 1 cut(s) 627
BstZI CGGCCG 1 cut(s) 949
Bsu15I ATCGAT 2 cut(s) 116, 459
BsuI GTATCC 1 cut(s) 316
BsuRI GGCC 7 cut(s) 293, 337, 465, 789, 951, 1130, 1250
BsuTUI ATCGAT 2 cut(s) 116, 459
BtgI CCRYGG 1 cut(s) 1195
BtrI CACGTC 1 cut(s) 988
BtsCI GGATG 5 cut(s) 421, 767, 810, 830, 927
BtsIMutI CAGTG 4 cut(s) 60, 438, 669, 1280
BveI ACCTGC 1 cut(s) 1108
Cac8I GCNNGC 4 cut(s) 218, 1128, 1132, 1302
CciI TCATGA 1 cut(s) 537
Cfr10I RCCGGY 1 cut(s) 1130
Cfr13I GGNCC 1 cut(s) 1248
ClaI ATCGAT 2 cut(s) 116, 459
Csp6I GTAC 3 cut(s) 97, 772, 991
CviQI GTAC 3 cut(s) 97, 772, 991
DdeI CTNAG 4 cut(s) 41, 52, 1279, 1286
DpnI GATC 7 cut(s) 684, 741, 779, 829, 854, 1210, 1216
DpnII GATC 7 cut(s) 682, 739, 777, 827, 852, 1208, 1214
EaeI YGGCCR 5 cut(s) 291, 335, 463, 787, 949
EagI CGGCCG 1 cut(s) 949
Eam1104I CTCTTC 3 cut(s) 197, 361, 510
EarI CTCTTC 3 cut(s) 197, 361, 510
EciI GGCGGA 2 cut(s) 74, 803
EclXI CGGCCG 1 cut(s) 949
Eco130I CCWWGG 3 cut(s) 162, 294, 466
Eco31I GGTCTC 1 cut(s) 1032
Eco32I GATATC 1 cut(s) 114
Eco52I CGGCCG 1 cut(s) 949
Eco57I CTGAAG 2 cut(s) 491, 1169
EcoRI GAATTC 1 cut(s) 533
EcoRII CCWGG 4 cut(s) 235, 318, 382, 1223
EcoRV GATATC 1 cut(s) 114
EcoT14I CCWWGG 3 cut(s) 162, 294, 466
ErhI CCWWGG 3 cut(s) 162, 294, 466
Esp3I CGTCTC 1 cut(s) 729
FaqI GGGAC 1 cut(s) 779
FauNDI CATATG 1 cut(s) 655
FblI GTMKAC 1 cut(s) 243
Fnu4HI GCNGC 4 cut(s) 338, 616, 790, 1251
FokI GGATG 5 cut(s) 428, 774, 797, 817, 914
Fsp4HI GCNGC 4 cut(s) 338, 616, 790, 1251
FspBI CTAG 4 cut(s) 327, 516, 795, 1142
GluI GCNGC 4 cut(s) 338, 616, 790, 1251
GsaI CCCAGC 1 cut(s) 1300
GsuI CTGGAG 2 cut(s) 405, 753
HaeIII GGCC 7 cut(s) 293, 337, 465, 789, 951, 1130, 1250
HapII CCGG 4 cut(s) 631, 952, 1131, 1167
HinfI GANTC 6 cut(s) 280, 420, 659, 689, 716, 1170
HpaII CCGG 4 cut(s) 631, 952, 1131, 1167
HphI GGTGA 3 cut(s) 455, 593, 1156
Hpy166II GTNNAC 4 cut(s) 244, 513, 991, 1164
Hpy188I TCNGA 7 cut(s) 131, 857, 985, 1007, 1149, 1237, 1282
Hpy188III TCNNGA 5 cut(s) 173, 538, 577, 686, 1212
Hpy8I GTNNAC 4 cut(s) 244, 513, 991, 1164
Hpy99I CGWCG 1 cut(s) 146
HpyAV CCTTC 2 cut(s) 1002, 1093
HpyCH4III ACNGT 2 cut(s) 979, 1275
HpyCH4IV ACGT 2 cut(s) 621, 987
HpyCH4V TGCA 3 cut(s) 615, 708, 1117
HpyF10VI GCNNNNNNNGC 4 cut(s) 299, 848, 1123, 1301
HpyF3I CTNAG 4 cut(s) 41, 52, 1279, 1286
HpySE526I ACGT 2 cut(s) 621, 987
KpnI GGTACC 1 cut(s) 100
KroI GCCGGC 1 cut(s) 1130
KroNI GCCGGC 1 cut(s) 1132
Kzo9I GATC 7 cut(s) 682, 739, 777, 827, 852, 1208, 1214
LmnI GCTCC 4 cut(s) 352, 376, 655, 1319
Lsp1109I GCAGC 1 cut(s) 627
LweI GCATC 3 cut(s) 936, 1098, 1313
MaeI CTAG 4 cut(s) 327, 516, 795, 1142
MaeII ACGT 2 cut(s) 621, 987
MaeIII GTNAC 3 cut(s) 67, 148, 637
MalI GATC 7 cut(s) 684, 741, 779, 829, 854, 1210, 1216
MbiI CCGCTC 2 cut(s) 759, 1290
MboI GATC 7 cut(s) 682, 739, 777, 827, 852, 1208, 1214
MboII GAAGA 5 cut(s) 214, 378, 497, 1010, 1162
MhlI GDGCHC 4 cut(s) 90, 1235, 1280, 1297
MlsI TGGCCA 2 cut(s) 293, 465
MluCI AATT 5 cut(s) 189, 331, 533, 642, 846
MluNI TGGCCA 2 cut(s) 293, 465
MlyI GAGTC 3 cut(s) 274, 653, 710
MmeI TCCRAC 2 cut(s) 1015, 1206
Mox20I TGGCCA 2 cut(s) 293, 465
MroNI GCCGGC 1 cut(s) 1130
MscI TGGCCA 2 cut(s) 293, 465
MseI TTAA 2 cut(s) 248, 1083
MslI CAYNNNNRTG 3 cut(s) 414, 1047, 1309
Msp20I TGGCCA 2 cut(s) 293, 465
MspA1I CMGCKG 1 cut(s) 340
MspI CCGG 4 cut(s) 631, 952, 1131, 1167
MspR9I CCNGG 5 cut(s) 237, 320, 384, 953, 1225
MvaI CCWGG 4 cut(s) 237, 320, 384, 1225
MwoI GCNNNNNNNGC 4 cut(s) 299, 848, 1123, 1301
NaeI GCCGGC 1 cut(s) 1132
NciI CCSGG 1 cut(s) 953
NdeI CATATG 1 cut(s) 655
NdeII GATC 7 cut(s) 682, 739, 777, 827, 852, 1208, 1214
NgoMIV GCCGGC 1 cut(s) 1130
NlaIV GGNNCC 4 cut(s) 98, 651, 1249, 1294
NmuCI GTSAC 1 cut(s) 637
NspI RCATGY 2 cut(s) 490, 1314
PagI TCATGA 1 cut(s) 537
PciI ACATGT 1 cut(s) 486
PdiI GCCGGC 1 cut(s) 1132
PfeI GAWTC 3 cut(s) 420, 689, 1170
PflMI CCANNNNNTGG 3 cut(s) 362, 430, 842
PfoI TCCNGGA 1 cut(s) 382
PkrI GCNGC 4 cut(s) 339, 617, 791, 1252
Ple19I CGATCG 1 cut(s) 855
PleI GAGTC 3 cut(s) 274, 653, 710
PpsI GAGTC 3 cut(s) 274, 653, 710
PscI ACATGT 1 cut(s) 486
Psp1406I AACGTT 1 cut(s) 621
Psp6I CCWGG 4 cut(s) 235, 318, 382, 1223
PspFI CCCAGC 1 cut(s) 1296
PspGI CCWGG 4 cut(s) 235, 318, 382, 1223
PspN4I GGNNCC 4 cut(s) 98, 651, 1249, 1294
PspPI GGNCC 1 cut(s) 1248
PvuI CGATCG 1 cut(s) 855
RsaI GTAC 3 cut(s) 98, 773, 992
RsaNI GTAC 3 cut(s) 97, 772, 991
RseI CAYNNNNRTG 3 cut(s) 414, 1047, 1309
SaqAI TTAA 2 cut(s) 248, 1083
SatI GCNGC 4 cut(s) 338, 616, 790, 1251
Sau3AI GATC 7 cut(s) 682, 739, 777, 827, 852, 1208, 1214
Sau96I GGNCC 1 cut(s) 1248
SchI GAGTC 3 cut(s) 274, 653, 710
ScrFI CCNGG 5 cut(s) 237, 320, 384, 953, 1225
SduI GDGCHC 4 cut(s) 90, 1235, 1280, 1297
SfaNI GCATC 3 cut(s) 936, 1098, 1313
SmiMI CAYNNNNRTG 3 cut(s) 414, 1047, 1309
Sse9I AATT 5 cut(s) 189, 331, 533, 642, 846
SsiI CCGC 8 cut(s) 59, 94, 338, 759, 790, 814, 1251, 1290
SspMI CTAG 4 cut(s) 327, 516, 795, 1142
StyD4I CCNGG 5 cut(s) 235, 318, 382, 951, 1223
StyI CCWWGG 3 cut(s) 162, 294, 466
TaaI ACNGT 2 cut(s) 979, 1275
TaiI ACGT 2 cut(s) 624, 990
TaqI TCGA 6 cut(s) 26, 116, 187, 398, 459, 545
TasI AATT 5 cut(s) 189, 331, 533, 642, 846
TatI WGTACW 1 cut(s) 990
TauI GCSGC 3 cut(s) 340, 792, 1253
TfiI GAWTC 3 cut(s) 420, 689, 1170
Tru1I TTAA 2 cut(s) 248, 1083
Tru9I TTAA 2 cut(s) 248, 1083
TscAI CASTG 4 cut(s) 60, 445, 676, 1280
TseFI GTSAC 1 cut(s) 637
TseI GCWGC 1 cut(s) 615
Tsp45I GTSAC 1 cut(s) 637
TspDTI ATGAA 4 cut(s) 398, 526, 554, 952
TspGWI ACGGA 1 cut(s) 137
TspRI CASTG 4 cut(s) 60, 445, 676, 1280
Van91I CCANNNNNTGG 3 cut(s) 362, 430, 842
XapI RAATTY 1 cut(s) 533
XceI RCATGY 2 cut(s) 490, 1314
XmiI GTMKAC 1 cut(s) 243
XspI CTAG 4 cut(s) 327, 516, 795, 1142
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.