Pectate lyase superfamily protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G23820 AT5G41870 |
| fragaria_vesca | FvH4_5g04440 |
| malus_domestica | MD06G1105300.v1.1 MD14G1127400.v1.1 |
| prunus_persica | Prupe.5G117600_v2.0.a1 Prupe.5G117600_v2.0.a1 |
| pyrus_communis | pycom06g09960 |
| rosa_chinensis | RchiOBHm_Chr6g0245371 RchiOBHm_Chr7g0195091 |
| rosa_laevigata | RLG00000004148 RLG00000015306 |
| rosa_multiflora | Rmu_sc0004584.1_g000009 |
| rosa_roxburghii | Rroxscaffold_3G00260790 |
| rosa_rugosa | Rorug07G0020300 Rorug07G0020400 Rorug07G0020500 |
| rosa_samantha | Rh6BG025300 Rh6BG025900 Rh6BG026000 Rh6BG026100 Rh6BG026400 Rh6CG023600 Rh6CG024900 Rh6DG023600 Rh6DG024300 Rh7AG147900 Rh7BG148500 Rh7CG152100 Rh7DG149100 |
| rosa_wichuraiana | Rw6G002480 Rw7G012620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 527 |
| AcsI | RAATTY | 1 cut(s) | 17 |
| AcuI | CTGAAG | 1 cut(s) | 550 |
| AfaI | GTAC | 4 cut(s) | 74, 205, 238, 299 |
| AgsI | TTSAA | 1 cut(s) | 401 |
| AjnI | CCWGG | 2 cut(s) | 7, 216 |
| AluBI | AGCT | 2 cut(s) | 110, 442 |
| AluI | AGCT | 2 cut(s) | 110, 442 |
| AlwI | GGATC | 1 cut(s) | 527 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 14 |
| AoxI | GGCC | 1 cut(s) | 499 |
| ApeKI | GCWGC | 1 cut(s) | 107 |
| ApoI | RAATTY | 1 cut(s) | 17 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 563 |
| AsuHPI | GGTGA | 2 cut(s) | 206, 221 |
| BbvI | GCAGC | 1 cut(s) | 119 |
| BccI | CCATC | 2 cut(s) | 269, 628 |
| BciT130I | CCWGG | 2 cut(s) | 9, 218 |
| BclI | TGATCA | 2 cut(s) | 211, 318 |
| BfaI | CTAG | 1 cut(s) | 464 |
| BisI | GCNGC | 1 cut(s) | 108 |
| BlsI | GCNGC | 1 cut(s) | 109 |
| BmcAI | AGTACT | 1 cut(s) | 205 |
| Bme1390I | CCNGG | 2 cut(s) | 9, 218 |
| BmiI | GGNNCC | 1 cut(s) | 6 |
| BmrFI | CCNGG | 2 cut(s) | 9, 218 |
| BpuEI | CTTGAG | 1 cut(s) | 72 |
| Bse1I | ACTGG | 1 cut(s) | 211 |
| Bse3DI | GCAATG | 1 cut(s) | 475 |
| BseBI | CCWGG | 2 cut(s) | 9, 218 |
| BseGI | GGATG | 1 cut(s) | 46 |
| BseMI | GCAATG | 1 cut(s) | 475 |
| BseMII | CTCAG | 1 cut(s) | 369 |
| BseNI | ACTGG | 1 cut(s) | 211 |
| BseXI | GCAGC | 1 cut(s) | 119 |
| BseYI | CCCAGC | 1 cut(s) | 110 |
| BshFI | GGCC | 1 cut(s) | 501 |
| BsnI | GGCC | 1 cut(s) | 501 |
| Bsp143I | GATC | 3 cut(s) | 211, 318, 532 |
| BspANI | GGCC | 1 cut(s) | 501 |
| BspCNI | CTCAG | 1 cut(s) | 370 |
| BspLI | GGNNCC | 1 cut(s) | 6 |
| BspPI | GGATC | 1 cut(s) | 527 |
| BsrDI | GCAATG | 1 cut(s) | 475 |
| BsrI | ACTGG | 1 cut(s) | 211 |
| BssMI | GATC | 3 cut(s) | 211, 318, 532 |
| Bst2UI | CCWGG | 2 cut(s) | 9, 218 |
| Bst4CI | ACNGT | 1 cut(s) | 496 |
| BstDEI | CTNAG | 2 cut(s) | 378, 578 |
| BstF5I | GGATG | 1 cut(s) | 46 |
| BstKTI | GATC | 3 cut(s) | 214, 321, 535 |
| BstMBI | GATC | 3 cut(s) | 211, 318, 532 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 486 |
| BstNI | CCWGG | 2 cut(s) | 9, 218 |
| BstSCI | CCNGG | 2 cut(s) | 7, 216 |
| BstV1I | GCAGC | 1 cut(s) | 119 |
| BsuRI | GGCC | 1 cut(s) | 501 |
| BtsCI | GGATG | 1 cut(s) | 46 |
| BtsIMutI | CAGTG | 2 cut(s) | 195, 375 |
| CaiI | CAGNNNCTG | 1 cut(s) | 14 |
| Csp6I | GTAC | 4 cut(s) | 73, 204, 237, 298 |
| CviAII | CATG | 2 cut(s) | 123, 302 |
| CviJI | RGCY | 6 cut(s) | 110, 171, 260, 442, 501, 605 |
| CviKI_1 | RGCY | 6 cut(s) | 110, 171, 260, 442, 501, 605 |
| CviQI | GTAC | 4 cut(s) | 73, 204, 237, 298 |
| DdeI | CTNAG | 2 cut(s) | 378, 578 |
| DpnI | GATC | 3 cut(s) | 213, 320, 534 |
| DpnII | GATC | 3 cut(s) | 211, 318, 532 |
| Eco57I | CTGAAG | 1 cut(s) | 550 |
| EcoRI | GAATTC | 1 cut(s) | 17 |
| EcoRII | CCWGG | 2 cut(s) | 7, 216 |
| FaeI | CATG | 2 cut(s) | 126, 305 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 571, 603 |
| FatI | CATG | 2 cut(s) | 122, 301 |
| FbaI | TGATCA | 2 cut(s) | 211, 318 |
| Fnu4HI | GCNGC | 1 cut(s) | 108 |
| FokI | GGATG | 1 cut(s) | 53 |
| Fsp4HI | GCNGC | 1 cut(s) | 108 |
| FspBI | CTAG | 1 cut(s) | 464 |
| GluI | GCNGC | 1 cut(s) | 108 |
| GsaI | CCCAGC | 1 cut(s) | 114 |
| HaeIII | GGCC | 1 cut(s) | 501 |
| Hin1II | CATG | 2 cut(s) | 126, 305 |
| HinfI | GANTC | 4 cut(s) | 115, 221, 382, 397 |
| HphI | GGTGA | 2 cut(s) | 206, 221 |
| Hpy188I | TCNGA | 2 cut(s) | 569, 631 |
| Hpy188III | TCNNGA | 1 cut(s) | 342 |
| HpyCH4III | ACNGT | 1 cut(s) | 496 |
| HpyCH4IV | ACGT | 2 cut(s) | 75, 156 |
| HpyCH4V | TGCA | 1 cut(s) | 619 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 486 |
| HpyF3I | CTNAG | 2 cut(s) | 378, 578 |
| HpySE526I | ACGT | 2 cut(s) | 75, 156 |
| Hsp92II | CATG | 2 cut(s) | 126, 305 |
| Ksp22I | TGATCA | 2 cut(s) | 211, 318 |
| Kzo9I | GATC | 3 cut(s) | 211, 318, 532 |
| LpnPI | CCDG | 8 cut(s) | 21, 96, 192, 203, 230, 253, 270, 515 |
| Lsp1109I | GCAGC | 1 cut(s) | 119 |
| MaeI | CTAG | 1 cut(s) | 464 |
| MaeII | ACGT | 2 cut(s) | 75, 156 |
| MaeIII | GTNAC | 1 cut(s) | 490 |
| MalI | GATC | 3 cut(s) | 213, 320, 534 |
| MboI | GATC | 3 cut(s) | 211, 318, 532 |
| MluCI | AATT | 1 cut(s) | 17 |
| MnlI | CCTC | 3 cut(s) | 76, 182, 563 |
| MroXI | GAANNNNTTC | 1 cut(s) | 563 |
| MseI | TTAA | 3 cut(s) | 290, 390, 596 |
| MspA1I | CMGCKG | 1 cut(s) | 110 |
| MspR9I | CCNGG | 2 cut(s) | 9, 218 |
| MvaI | CCWGG | 2 cut(s) | 9, 218 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 486 |
| NdeII | GATC | 3 cut(s) | 211, 318, 532 |
| NlaIII | CATG | 2 cut(s) | 126, 305 |
| NlaIV | GGNNCC | 1 cut(s) | 6 |
| PdmI | GAANNNNTTC | 1 cut(s) | 563 |
| PfeI | GAWTC | 4 cut(s) | 115, 221, 382, 397 |
| PkrI | GCNGC | 1 cut(s) | 109 |
| Psp6I | CCWGG | 2 cut(s) | 7, 216 |
| PspFI | CCCAGC | 1 cut(s) | 110 |
| PspGI | CCWGG | 2 cut(s) | 7, 216 |
| PspN4I | GGNNCC | 1 cut(s) | 6 |
| PstNI | CAGNNNCTG | 1 cut(s) | 14 |
| PvuII | CAGCTG | 1 cut(s) | 110 |
| RsaI | GTAC | 4 cut(s) | 74, 205, 238, 299 |
| RsaNI | GTAC | 4 cut(s) | 73, 204, 237, 298 |
| SaqAI | TTAA | 3 cut(s) | 290, 390, 596 |
| SatI | GCNGC | 1 cut(s) | 108 |
| Sau3AI | GATC | 3 cut(s) | 211, 318, 532 |
| ScaI | AGTACT | 1 cut(s) | 205 |
| ScrFI | CCNGG | 2 cut(s) | 9, 218 |
| SetI | ASST | 6 cut(s) | 78, 112, 139, 159, 444, 530 |
| SmlI | CTYRAG | 1 cut(s) | 87 |
| SmoI | CTYRAG | 1 cut(s) | 87 |
| Sse9I | AATT | 1 cut(s) | 17 |
| SspMI | CTAG | 1 cut(s) | 464 |
| StyD4I | CCNGG | 2 cut(s) | 7, 216 |
| TaaI | ACNGT | 1 cut(s) | 496 |
| TaiI | ACGT | 2 cut(s) | 78, 159 |
| TaqI | TCGA | 2 cut(s) | 145, 343 |
| TasI | AATT | 1 cut(s) | 17 |
| TatI | WGTACW | 1 cut(s) | 203 |
| TfiI | GAWTC | 4 cut(s) | 115, 221, 382, 397 |
| Tru1I | TTAA | 3 cut(s) | 290, 390, 596 |
| Tru9I | TTAA | 3 cut(s) | 290, 390, 596 |
| TscAI | CASTG | 2 cut(s) | 195, 382 |
| TseI | GCWGC | 1 cut(s) | 107 |
| TspDTI | ATGAA | 4 cut(s) | 72, 537, 572, 582 |
| TspRI | CASTG | 2 cut(s) | 195, 382 |
| XapI | RAATTY | 1 cut(s) | 17 |
| XmnI | GAANNNNTTC | 1 cut(s) | 563 |
| XspI | CTAG | 1 cut(s) | 464 |
| ZrmI | AGTACT | 1 cut(s) | 205 |