Prupe.5G137500_v2.0.a1

Transmembrane protein 120

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0006071
Physical Location & Seq
Forward (+)
12961796 .. 12966323
4528 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G137500.1

Sequence Viewer

Length: 1101 bp
ATGGGAGAAGCGAAGAGGAACTCTTCTTCTTCTTCTTCGAACAGTGACGAGGACATACAAGCACAAGTGGCCAAAGCGGTGGAGGGTGTGAAGGAGCTTCAGGAGTCAGCTGCTTCCTTCATCTCCAAAACCTCCACTGATGAGCAAGCCCTTCGCCAGAGATCCCAATCTCTCGATTCCTCCATTCGCCTCCTAAGGTCCCAGCTTTATTCTCTGCTCTCCAGCAAGGCCTTGGATCCCAAGTTAGCAGAAAAGCTGGAAGAAGATTTGCAGAGGGCTACATGTGTGTTGGCGGATGGTGATGCCGCTTCATTTCTTCCTGGCAAAGCTCAGGGAGGGAGGTTTCTGAGGATGTTTCTTGGTCCTATAACCGTGCGTTCCTCCAGCAAAGACATCCAACTCAAGGTTAAAGAGGAATACAATGCTTACAGAGATAGAACTGCCCTGCTATTCCTTCTTTTTCCAGCAACACTACTTATTCTGAGATCTTGGCTTTGGGATGGATGCTTGCCAACATTCCCAGTTCAGGCTTACCAGGCATGGCTGTTATTCCTCTACACTGGTTTGGCATTGCGAGAAAACATACTAAGAGTAAATGGAAGTGATATTCGTCCATGGTGGATATACCATCATTATTGTGCTATGTTTATGGCCCTTGTTAGTCTCACATGGGAGATTAAAGGACAACCAGATTGTTCCCAAAAGCAGAGAGGCGTCCAACTTTTCCTACAATGGGCTATGATGCAAGGAGTTGCTATGCTTTTACAGAATAGATATCAACGCCAGAGACTCTATACTCGAATTGCATTGGGAAAGGCCAAAAGAATGGATGTTGTCTGGGGAGAAACAGCTGGTGTAGATGGTCAACTGTGGCTTCTATGTCCAATACTGTTTATATTGCAGGGTTTTGAGGCATATGTCGGACTACAATTGCTTAAGACTGCTTTGGTTGGCGTTGCTTCTGAATGGCAGGTAAGTTTTTGCGGCGTACTGCTAGTTTTGATGGCAGTTGGGAACTTTGTAAATACGGTACAGACGCTTATGGTGAAGTCAAGGTTTAAGGCAAAGATGAAAAGAACTAAGAGCAAGCAGGATTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TMPIT

Protein Analysis

367

Amino Acids

41.33

Weight (kDa)

9.48

Isoelectric Point (pI)

47.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 961
AciI CCGC 4 cut(s) 77, 293, 306, 984
AclWI GGATC 3 cut(s) 156, 230, 243
AcoI YGGCCR 1 cut(s) 69
AcuI CTGAAG 1 cut(s) 83
AcyI GRCGYC 1 cut(s) 714
AfaI GTAC 2 cut(s) 990, 1032
AfiI CCNNNNNNNGG 3 cut(s) 403, 526, 733
AflII CTTAAG 1 cut(s) 935
AflIII ACRYGT 1 cut(s) 281
AjnI CCWGG 2 cut(s) 319, 534
AluBI AGCT 6 cut(s) 97, 110, 205, 256, 329, 851
AluI AGCT 6 cut(s) 97, 110, 205, 256, 329, 851
Alw26I GTCTC 2 cut(s) 668, 781
AlwI GGATC 3 cut(s) 156, 230, 243
AoxI GGCC 4 cut(s) 69, 228, 651, 816
ApeKI GCWGC 1 cut(s) 110
AspS9I GGNCC 3 cut(s) 198, 362, 652
AsuHPI GGTGA 2 cut(s) 311, 1057
AsuII TTCGAA 1 cut(s) 38
AvaII GGWCC 2 cut(s) 198, 362
AxyI CCTNAGG 1 cut(s) 194
BalI TGGCCA 1 cut(s) 71
BamHI GGATCC 1 cut(s) 235
BbvI GCAGC 1 cut(s) 97
BccI CCATC 5 cut(s) 290, 494, 636, 854, 997
BcgI CGANNNNNNTGC 2 cut(s) 134, 168
BciT130I CCWGG 2 cut(s) 321, 536
BcoDI GTCTC 2 cut(s) 668, 781
BfaI CTAG 1 cut(s) 995
BfrI CTTAAG 1 cut(s) 935
BfuAI ACCTGC 1 cut(s) 961
BglII AGATCT 1 cut(s) 485
BisI GCNGC 3 cut(s) 111, 306, 985
BlsI GCNGC 3 cut(s) 112, 307, 986
Bme1390I CCNGG 2 cut(s) 321, 536
Bme18I GGWCC 2 cut(s) 198, 362
BmgT120I GGNCC 3 cut(s) 198, 362, 652
BmiI GGNNCC 2 cut(s) 200, 237
BmrFI CCNGG 2 cut(s) 321, 536
BmrI ACTGGG 1 cut(s) 515
BmsI GCATC 3 cut(s) 292, 494, 732
BmuI ACTGGG 1 cut(s) 515
BpmI CTGGAG 2 cut(s) 205, 367
Bpu10I CCTNAGC 1 cut(s) 330
Bpu14I TTCGAA 1 cut(s) 38
BpuEI CTTGAG 1 cut(s) 386
BsaBI GATNNNNATC 1 cut(s) 166
BsaHI GRCGYC 1 cut(s) 714
BsaJI CCNNGG 2 cut(s) 231, 614
Bsc4I CCNNNNNNNGG 3 cut(s) 403, 526, 733
Bse1I ACTGG 2 cut(s) 521, 565
Bse21I CCTNAGG 1 cut(s) 194
Bse3DI GCAATG 1 cut(s) 569
Bse8I GATNNNNATC 1 cut(s) 166
BseBI CCWGG 2 cut(s) 321, 536
BseDI CCNNGG 2 cut(s) 231, 614
BseGI GGATG 6 cut(s) 301, 357, 393, 505, 509, 835
BseJI GATNNNNATC 1 cut(s) 166
BseLI CCNNNNNNNGG 3 cut(s) 403, 526, 733
BseMI GCAATG 1 cut(s) 569
BseMII CTCAG 3 cut(s) 338, 344, 473
BseNI ACTGG 2 cut(s) 521, 565
BseXI GCAGC 1 cut(s) 97
BseYI CCCAGC 1 cut(s) 201
BshFI GGCC 4 cut(s) 71, 230, 653, 818
BslFI GGGAC 1 cut(s) 184
BslI CCNNNNNNNGG 3 cut(s) 403, 526, 733
BsmAI GTCTC 2 cut(s) 668, 781
BsmFI GGGAC 1 cut(s) 184
BsnI GGCC 4 cut(s) 71, 230, 653, 818
Bsp119I TTCGAA 1 cut(s) 38
Bsp143I GATC 3 cut(s) 161, 235, 485
Bsp19I CCATGG 1 cut(s) 614
BspACI CCGC 4 cut(s) 77, 293, 306, 984
BspANI GGCC 4 cut(s) 71, 230, 653, 818
BspCNI CTCAG 3 cut(s) 339, 343, 474
BspLI GGNNCC 2 cut(s) 200, 237
BspMI ACCTGC 1 cut(s) 961
BspPI GGATC 3 cut(s) 156, 230, 243
BspT104I TTCGAA 1 cut(s) 38
BspTI CTTAAG 1 cut(s) 935
BsrDI GCAATG 1 cut(s) 569
BsrI ACTGG 2 cut(s) 521, 565
BssECI CCNNGG 2 cut(s) 231, 614
BssMI GATC 3 cut(s) 161, 235, 485
BssNI GRCGYC 1 cut(s) 714
BssT1I CCWWGG 2 cut(s) 231, 614
Bst2UI CCWGG 2 cut(s) 321, 536
Bst4CI ACNGT 5 cut(s) 44, 373, 870, 891, 1030
Bst6I CTCTTC 2 cut(s) 8, 28
BstACI GRCGYC 1 cut(s) 714
BstAFI CTTAAG 1 cut(s) 935
BstBI TTCGAA 1 cut(s) 38
BstC8I GCNNGC 3 cut(s) 147, 509, 1088
BstDEI CTNAG 6 cut(s) 194, 330, 347, 482, 587, 1080
BstDSI CCRYGG 1 cut(s) 614
BstF5I GGATG 6 cut(s) 301, 357, 393, 505, 509, 835
BstKTI GATC 3 cut(s) 164, 238, 488
BstMAI GTCTC 2 cut(s) 668, 781
BstMBI GATC 3 cut(s) 161, 235, 485
BstMWI GCNNNNNNNGC 2 cut(s) 68, 536
BstNI CCWGG 2 cut(s) 321, 536
BstNSI RCATGY 1 cut(s) 285
BstSCI CCNGG 2 cut(s) 319, 534
BstV1I GCAGC 1 cut(s) 97
BstX2I RGATCY 3 cut(s) 161, 235, 485
BstXI CCANNNNNNTGG 2 cut(s) 79, 826
BstYI RGATCY 3 cut(s) 161, 235, 485
Bsu36I CCTNAGG 1 cut(s) 194
BsuRI GGCC 4 cut(s) 71, 230, 653, 818
BtgI CCRYGG 1 cut(s) 614
BtsCI GGATG 6 cut(s) 301, 357, 393, 505, 509, 835
BtsIMutI CAGTG 3 cut(s) 49, 135, 558
BveI ACCTGC 1 cut(s) 961
Cac8I GCNNGC 3 cut(s) 147, 509, 1088
Cfr13I GGNCC 3 cut(s) 198, 362, 652
CseI GACGC 2 cut(s) 703, 1045
Csp6I GTAC 2 cut(s) 989, 1031
CviAII CATG 4 cut(s) 282, 540, 615, 669
CviQI GTAC 2 cut(s) 989, 1031
DdeI CTNAG 6 cut(s) 194, 330, 347, 482, 587, 1080
DpnI GATC 3 cut(s) 163, 237, 487
DpnII GATC 3 cut(s) 161, 235, 485
EaeI YGGCCR 1 cut(s) 69
Eam1104I CTCTTC 2 cut(s) 8, 28
EarI CTCTTC 2 cut(s) 8, 28
EciI GGCGGA 1 cut(s) 308
Eco130I CCWWGG 2 cut(s) 231, 614
Eco147I AGGCCT 1 cut(s) 230
Eco32I GATATC 1 cut(s) 776
Eco47I GGWCC 2 cut(s) 198, 362
Eco57I CTGAAG 1 cut(s) 83
Eco81I CCTNAGG 1 cut(s) 194
EcoO109I RGGNCCY 1 cut(s) 198
EcoRII CCWGG 2 cut(s) 319, 534
EcoRV GATATC 1 cut(s) 776
EcoT14I CCWWGG 2 cut(s) 231, 614
ErhI CCWWGG 2 cut(s) 231, 614
FaeI CATG 4 cut(s) 285, 543, 618, 672
FaqI GGGAC 1 cut(s) 184
FatI CATG 4 cut(s) 281, 539, 614, 668
FauNDI CATATG 1 cut(s) 916
Fnu4HI GCNGC 3 cut(s) 111, 306, 985
FokI GGATG 6 cut(s) 308, 364, 380, 512, 516, 842
Fsp4HI GCNGC 3 cut(s) 111, 306, 985
FspBI CTAG 1 cut(s) 995
GluI GCNGC 3 cut(s) 111, 306, 985
GsaI CCCAGC 1 cut(s) 205
GsuI CTGGAG 2 cut(s) 205, 367
HaeIII GGCC 4 cut(s) 71, 230, 653, 818
HgaI GACGC 2 cut(s) 703, 1045
Hin1I GRCGYC 1 cut(s) 714
Hin1II CATG 4 cut(s) 285, 543, 618, 672
HincII GTYRAC 1 cut(s) 866
HindII GTYRAC 1 cut(s) 866
HinfI GANTC 3 cut(s) 104, 176, 789
HphI GGTGA 2 cut(s) 311, 1057
Hpy166II GTNNAC 1 cut(s) 866
Hpy188I TCNGA 4 cut(s) 348, 483, 923, 964
Hpy188III TCNNGA 2 cut(s) 101, 173
Hpy8I GTNNAC 1 cut(s) 866
HpyAV CCTTC 4 cut(s) 85, 127, 161, 464
HpyCH4III ACNGT 5 cut(s) 44, 373, 870, 891, 1030
HpyCH4V TGCA 4 cut(s) 271, 745, 806, 901
HpyF10VI GCNNNNNNNGC 2 cut(s) 68, 536
HpyF3I CTNAG 6 cut(s) 194, 330, 347, 482, 587, 1080
Hsp92I GRCGYC 1 cut(s) 714
Hsp92II CATG 4 cut(s) 285, 543, 618, 672
Kzo9I GATC 3 cut(s) 161, 235, 485
LmnI GCTCC 1 cut(s) 94
Lsp1109I GCAGC 1 cut(s) 97
LweI GCATC 3 cut(s) 292, 494, 732
MaeI CTAG 1 cut(s) 995
MaeIII GTNAC 1 cut(s) 44
MalI GATC 3 cut(s) 163, 237, 487
MboI GATC 3 cut(s) 161, 235, 485
MboII GAAGA 9 cut(s) 15, 18, 21, 24, 25, 27, 272, 275, 308
MfeI CAATTG 1 cut(s) 929
MflI RGATCY 3 cut(s) 161, 235, 485
MlsI TGGCCA 1 cut(s) 71
MluCI AATT 2 cut(s) 801, 929
MluNI TGGCCA 1 cut(s) 71
MlyI GAGTC 2 cut(s) 113, 783
MmeI TCCRAC 3 cut(s) 421, 742, 901
Mox20I TGGCCA 1 cut(s) 71
MscI TGGCCA 1 cut(s) 71
MseI TTAA 4 cut(s) 408, 678, 936, 1059
MslI CAYNNNNRTG 1 cut(s) 636
Msp20I TGGCCA 1 cut(s) 71
MspA1I CMGCKG 2 cut(s) 110, 851
MspCI CTTAAG 1 cut(s) 935
MspR9I CCNGG 2 cut(s) 321, 536
MunI CAATTG 1 cut(s) 929
MvaI CCWGG 2 cut(s) 321, 536
MwoI GCNNNNNNNGC 2 cut(s) 68, 536
NcoI CCATGG 1 cut(s) 614
NdeI CATATG 1 cut(s) 916
NdeII GATC 3 cut(s) 161, 235, 485
NlaIII CATG 4 cut(s) 285, 543, 618, 672
NlaIV GGNNCC 2 cut(s) 200, 237
NmuCI GTSAC 1 cut(s) 44
NspI RCATGY 1 cut(s) 285
NspV TTCGAA 1 cut(s) 38
PceI AGGCCT 1 cut(s) 230
PciI ACATGT 1 cut(s) 281
PfeI GAWTC 1 cut(s) 176
PkrI GCNGC 3 cut(s) 112, 307, 986
PleI GAGTC 2 cut(s) 112, 783
PpsI GAGTC 2 cut(s) 112, 783
PpuMI RGGWCCY 1 cut(s) 198
PscI ACATGT 1 cut(s) 281
Psp5II RGGWCCY 1 cut(s) 198
Psp6I CCWGG 2 cut(s) 319, 534
PspFI CCCAGC 1 cut(s) 201
PspGI CCWGG 2 cut(s) 319, 534
PspN4I GGNNCC 2 cut(s) 200, 237
PspPI GGNCC 3 cut(s) 198, 362, 652
PspPPI RGGWCCY 1 cut(s) 198
PsuI RGATCY 3 cut(s) 161, 235, 485
PvuII CAGCTG 2 cut(s) 110, 851
RsaI GTAC 2 cut(s) 990, 1032
RsaNI GTAC 2 cut(s) 989, 1031
RseI CAYNNNNRTG 1 cut(s) 636
SaqAI TTAA 4 cut(s) 408, 678, 936, 1059
SatI GCNGC 3 cut(s) 111, 306, 985
Sau3AI GATC 3 cut(s) 161, 235, 485
Sau96I GGNCC 3 cut(s) 198, 362, 652
SchI GAGTC 2 cut(s) 113, 783
ScrFI CCNGG 2 cut(s) 321, 536
SfaNI GCATC 3 cut(s) 292, 494, 732
SfuI TTCGAA 1 cut(s) 38
SinI GGWCC 2 cut(s) 198, 362
SmiMI CAYNNNNRTG 1 cut(s) 636
SmlI CTYRAG 2 cut(s) 401, 935
SmoI CTYRAG 2 cut(s) 401, 935
Sse9I AATT 2 cut(s) 801, 929
SseBI AGGCCT 1 cut(s) 230
SsiI CCGC 4 cut(s) 77, 293, 306, 984
SspMI CTAG 1 cut(s) 995
StuI AGGCCT 1 cut(s) 230
StyD4I CCNGG 2 cut(s) 319, 534
StyI CCWWGG 2 cut(s) 231, 614
TaaI ACNGT 5 cut(s) 44, 373, 870, 891, 1030
TaqI TCGA 3 cut(s) 38, 174, 799
TasI AATT 2 cut(s) 801, 929
TauI GCSGC 2 cut(s) 308, 987
TfiI GAWTC 1 cut(s) 176
Tru1I TTAA 4 cut(s) 408, 678, 936, 1059
Tru9I TTAA 4 cut(s) 408, 678, 936, 1059
TscAI CASTG 3 cut(s) 49, 142, 565
TseFI GTSAC 1 cut(s) 44
TseI GCWGC 1 cut(s) 110
Tsp45I GTSAC 1 cut(s) 44
TspDTI ATGAA 3 cut(s) 109, 300, 1085
TspRI CASTG 3 cut(s) 49, 142, 565
Vha464I CTTAAG 1 cut(s) 935
VpaK11BI GGWCC 2 cut(s) 198, 362
XceI RCATGY 1 cut(s) 285
XcmI CCANNNNNNNNNTGG 1 cut(s) 229
XspI CTAG 1 cut(s) 995
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.