Rh7BG094400

Transmembrane protein 120

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0006071
Physical Location & Seq
Forward (+)
6940051 .. 6945025
4975 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG094400.1

Sequence Viewer

Length: 1107 bp
ATGGGAGATGATGCGAAGATGAAGAGCTCTTGTTCTGATTCGCCTACTCTGGACGCCCTACAAGCTCAAGTCACCGAAGCCATGGAGGGCGCCAAGTCGTTACAGGACTCAGCTTCCTCCTTCATCTCCAGAAACTCCAGCGAGGAACAGTCGCTTCGCCAGCGAGCCCAGTCTCTCGATTCCACAATCCGCCGCCTCCGTTCCCAAATCTATTCTCTTCATCATCATGACAACAAGGCCGTGGATCCCAAGCTCTGCGAAAAGCTGGAAGAAGATTTGCACAGGGCCACGTGTGTTTTGACGGACGGAGACGCCGGTTCTTTTCTTCCTCCCAAAGCTCACGGGGGGTTTCTGAGGATGTTTCTTGGTCCTATCAACGTGCGTTCGTCTAGCAAAGACATCCAACTCAAGGTTAAAGAGGAATACAATGCTTACAGAGATCGAACTGCCCTGCTATTCCTTCTCTTTCCATTTGCACTACTTATTCTGAGATCTTGGATATGGGATGGATGCTTGCCAACATTTCCTGTTCAAGCTTACCAGGCATGGCTCTTATTCCTCTACACTGGTTTGTCATTGCGAGAAAACATACTGAGAGTAAACGGAAGTGATATTCGTCCATGGTGGATATACCATCACTATTGTGCTATGTTTATGGCCATGGTTAGTCTCACATGGGACATTCAAGGACAACCAAATTGTGCCCAAAAGCAGAGAGGGGTGGAACTTTTCCTGCAATGGGCAATGATGCAAGGAGTGGCTATGCTTTTACAAAATAGATATCAACGCCAGAGACTGTATACTCGAATTGCATTGGGAAAGGCCAATAGGATGGACGTCGTATGGGGTGAAACAGCTGGTGTTGATGGTCAATTGTGGCTTCTATGTCCCATACTTTTTATAATGCAGGGTTTTGAGGCGTATGTTGGACTACAGTTGCTTAAGACTGCTTTGTTCGGGGATGTTACCGAATGGCAGGTGAGTTTGTGCGGTGTGCTATTAATTCTTATGGCGATCGGGAACTTTGTAAATACTGTACAAACACTCATGGTGAAATCGAGGTTCAAGGCAAAGATGAAAAAGACCAAGAGCAAGCAGGAATTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TMPIT

Protein Analysis

368

Amino Acids

41.93

Weight (kDa)

9.03

Isoelectric Point (pI)

47.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TMEM120A-B PF07851 21 - 355 1.8e-99 TMEM120A/B
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 902
AarI CACCTGC 1 cut(s) 967
AatII GACGTC 1 cut(s) 840
Acc36I ACCTGC 1 cut(s) 967
AccB1I GGYRCC 1 cut(s) 89
AccI GTMKAC 1 cut(s) 800
AciI CCGC 3 cut(s) 190, 193, 990
AclWI GGATC 2 cut(s) 239, 252
AcoI YGGCCR 1 cut(s) 657
AcvI CACGTG 1 cut(s) 291
AcyI GRCGYC 4 cut(s) 54, 90, 312, 837
AfaI GTAC 1 cut(s) 1038
AfiI CCNNNNNNNGG 2 cut(s) 409, 739
AflII CTTAAG 1 cut(s) 941
AflIII ACRYGT 1 cut(s) 290
AgsI TTSAA 3 cut(s) 533, 686, 1066
AjnI CCWGG 1 cut(s) 540
AleI CACNNNNGTG 1 cut(s) 642
AluBI AGCT 8 cut(s) 27, 65, 113, 253, 265, 338, 536, 857
AluI AGCT 8 cut(s) 27, 65, 113, 253, 265, 338, 536, 857
Alw21I GWGCWC 1 cut(s) 29
Alw26I GTCTC 4 cut(s) 177, 303, 674, 787
AlwI GGATC 2 cut(s) 239, 252
AlwNI CAGNNNCTG 1 cut(s) 796
AoxI GGCC 4 cut(s) 237, 285, 657, 822
AseI ATTAAT 1 cut(s) 1001
AspLEI GCGC 1 cut(s) 92
AspS9I GGNCC 2 cut(s) 285, 368
AsuHPI GGTGA 4 cut(s) 64, 860, 991, 1063
AvaII GGWCC 1 cut(s) 368
BaeGI GKGCMC 1 cut(s) 706
BalI TGGCCA 1 cut(s) 659
BamHI GGATCC 1 cut(s) 244
BanI GGYRCC 1 cut(s) 89
BanII GRGCYC 2 cut(s) 29, 169
BbrPI CACGTG 1 cut(s) 291
Bbv12I GWGCWC 1 cut(s) 29
BccI CCATC 4 cut(s) 500, 642, 826, 860
BceAI ACGGC 1 cut(s) 224
BciT130I CCWGG 1 cut(s) 542
BcoDI GTCTC 4 cut(s) 177, 303, 674, 787
BfaI CTAG 1 cut(s) 390
BfmI CTRYAG 1 cut(s) 932
BfoI RGCGCY 1 cut(s) 93
BfrI CTTAAG 1 cut(s) 941
BfuAI ACCTGC 1 cut(s) 967
BglII AGATCT 1 cut(s) 491
BisI GCNGC 1 cut(s) 193
BlsI GCNGC 1 cut(s) 194
Bme1390I CCNGG 1 cut(s) 542
Bme18I GGWCC 1 cut(s) 368
BmgT120I GGNCC 2 cut(s) 285, 368
BmiI GGNNCC 2 cut(s) 91, 246
BmrFI CCNGG 1 cut(s) 542
BmrI ACTGGG 1 cut(s) 163
BmsI GCATC 2 cut(s) 500, 738
BmuI ACTGGG 1 cut(s) 163
BpmI CTGGAG 2 cut(s) 112, 121
BpuEI CTTGAG 2 cut(s) 51, 392
BsaAI YACGTR 1 cut(s) 291
BsaHI GRCGYC 4 cut(s) 54, 90, 312, 837
BsaJI CCNNGG 4 cut(s) 81, 240, 620, 660
Bsc4I CCNNNNNNNGG 2 cut(s) 409, 739
Bse118I RCCGGY 1 cut(s) 314
Bse1I ACTGG 2 cut(s) 169, 571
Bse3DI GCAATG 3 cut(s) 575, 743, 750
BseBI CCWGG 1 cut(s) 542
BseDI CCNNGG 4 cut(s) 81, 240, 620, 660
BseGI GGATG 6 cut(s) 363, 399, 511, 515, 837, 967
BseLI CCNNNNNNNGG 2 cut(s) 409, 739
BseMI GCAATG 3 cut(s) 575, 743, 750
BseMII CTCAG 4 cut(s) 123, 344, 479, 584
BseNI ACTGG 2 cut(s) 169, 571
BseSI GKGCMC 1 cut(s) 706
Bsh1285I CGRYCG 1 cut(s) 1017
BshFI GGCC 4 cut(s) 239, 287, 659, 824
BshNI GGYRCC 1 cut(s) 89
BsiEI CGRYCG 1 cut(s) 1017
BsiHKAI GWGCWC 1 cut(s) 29
BsiSI CCGG 1 cut(s) 315
BslFI GGGAC 2 cut(s) 692, 873
BslI CCNNNNNNNGG 2 cut(s) 409, 739
BsmAI GTCTC 4 cut(s) 177, 303, 674, 787
BsmBI CGTCTC 1 cut(s) 303
BsmFI GGGAC 2 cut(s) 692, 873
BsnI GGCC 4 cut(s) 239, 287, 659, 824
Bsp1286I GDGCHC 3 cut(s) 29, 169, 706
Bsp1407I TGTACA 1 cut(s) 1036
Bsp143I GATC 4 cut(s) 244, 439, 491, 1014
Bsp19I CCATGG 3 cut(s) 81, 620, 660
BspACI CCGC 3 cut(s) 190, 193, 990
BspANI GGCC 4 cut(s) 239, 287, 659, 824
BspCNI CTCAG 4 cut(s) 122, 345, 480, 585
BspHI TCATGA 1 cut(s) 226
BspLI GGNNCC 2 cut(s) 91, 246
BspMI ACCTGC 1 cut(s) 967
BspPI GGATC 2 cut(s) 239, 252
BspQI GCTCTTC 1 cut(s) 17
BspT107I GGYRCC 1 cut(s) 89
BspTI CTTAAG 1 cut(s) 941
BsrDI GCAATG 3 cut(s) 575, 743, 750
BsrFI RCCGGY 1 cut(s) 314
BsrGI TGTACA 1 cut(s) 1036
BsrI ACTGG 2 cut(s) 169, 571
BssAI RCCGGY 1 cut(s) 314
BssECI CCNNGG 4 cut(s) 81, 240, 620, 660
BssMI GATC 4 cut(s) 244, 439, 491, 1014
BssNAI GTATAC 1 cut(s) 801
BssNI GRCGYC 4 cut(s) 54, 90, 312, 837
BssT1I CCWWGG 3 cut(s) 81, 620, 660
Bst1107I GTATAC 1 cut(s) 801
Bst2UI CCWGG 1 cut(s) 542
Bst4CI ACNGT 4 cut(s) 150, 798, 936, 1036
Bst6I CTCTTC 2 cut(s) 17, 222
BstACI GRCGYC 4 cut(s) 54, 90, 312, 837
BstAFI CTTAAG 1 cut(s) 941
BstAUI TGTACA 1 cut(s) 1036
BstBAI YACGTR 1 cut(s) 291
BstC8I GCNNGC 4 cut(s) 161, 165, 515, 1094
BstDEI CTNAG 4 cut(s) 109, 353, 488, 593
BstDSI CCRYGG 4 cut(s) 81, 240, 620, 660
BstF5I GGATG 6 cut(s) 363, 399, 511, 515, 837, 967
BstH2I RGCGCY 1 cut(s) 93
BstHHI GCGC 1 cut(s) 92
BstKTI GATC 4 cut(s) 247, 442, 494, 1017
BstMAI GTCTC 4 cut(s) 177, 303, 674, 787
BstMBI GATC 4 cut(s) 244, 439, 491, 1014
BstMCI CGRYCG 1 cut(s) 1017
BstMWI GCNNNNNNNGC 3 cut(s) 62, 160, 542
BstNI CCWGG 1 cut(s) 542
BstSCI CCNGG 1 cut(s) 540
BstSFI CTRYAG 1 cut(s) 932
BstSLI GKGCMC 1 cut(s) 706
BstX2I RGATCY 2 cut(s) 244, 491
BstXI CCANNNNNNTGG 1 cut(s) 832
BstYI RGATCY 2 cut(s) 244, 491
BstZ17I GTATAC 1 cut(s) 801
BsuRI GGCC 4 cut(s) 239, 287, 659, 824
BtgI CCRYGG 4 cut(s) 81, 240, 620, 660
BtsCI GGATG 6 cut(s) 363, 399, 511, 515, 837, 967
BtsIMutI CAGTG 1 cut(s) 564
BveI ACCTGC 1 cut(s) 967
Cac8I GCNNGC 4 cut(s) 161, 165, 515, 1094
CaiI CAGNNNCTG 1 cut(s) 796
CciI TCATGA 1 cut(s) 226
CfoI GCGC 1 cut(s) 92
Cfr10I RCCGGY 1 cut(s) 314
Cfr13I GGNCC 2 cut(s) 285, 368
CseI GACGC 2 cut(s) 62, 320
Csp6I GTAC 1 cut(s) 1037
CviAII CATG 7 cut(s) 82, 227, 546, 621, 661, 675, 1048
CviQI GTAC 1 cut(s) 1037
DdeI CTNAG 4 cut(s) 109, 353, 488, 593
DinI GGCGCC 1 cut(s) 91
DpnI GATC 4 cut(s) 246, 441, 493, 1016
DpnII GATC 4 cut(s) 244, 439, 491, 1014
EaeI YGGCCR 1 cut(s) 657
Eam1104I CTCTTC 2 cut(s) 17, 222
EarI CTCTTC 2 cut(s) 17, 222
EciI GGCGGA 1 cut(s) 179
Ecl136II GAGCTC 1 cut(s) 27
Eco130I CCWWGG 3 cut(s) 81, 620, 660
Eco24I GRGCYC 2 cut(s) 29, 169
Eco32I GATATC 1 cut(s) 782
Eco47I GGWCC 1 cut(s) 368
Eco53kI GAGCTC 1 cut(s) 27
Eco72I CACGTG 1 cut(s) 291
EcoICRI GAGCTC 1 cut(s) 27
EcoRII CCWGG 1 cut(s) 540
EcoRV GATATC 1 cut(s) 782
EcoT14I CCWWGG 3 cut(s) 81, 620, 660
EcoT38I GRGCYC 2 cut(s) 29, 169
EgeI GGCGCC 1 cut(s) 91
EheI GGCGCC 1 cut(s) 91
ErhI CCWWGG 3 cut(s) 81, 620, 660
Esp3I CGTCTC 1 cut(s) 303
FaeI CATG 7 cut(s) 85, 230, 549, 624, 664, 678, 1051
FaqI GGGAC 2 cut(s) 692, 873
FatI CATG 7 cut(s) 81, 226, 545, 620, 660, 674, 1047
FblI GTMKAC 1 cut(s) 800
Fnu4HI GCNGC 1 cut(s) 193
FokI GGATG 6 cut(s) 370, 386, 518, 522, 844, 974
FriOI GRGCYC 2 cut(s) 29, 169
Fsp4HI GCNGC 1 cut(s) 193
FspBI CTAG 1 cut(s) 390
GlaI GCGC 1 cut(s) 91
GluI GCNGC 1 cut(s) 193
GsuI CTGGAG 2 cut(s) 112, 121
HaeII RGCGCY 1 cut(s) 93
HaeIII GGCC 4 cut(s) 239, 287, 659, 824
HapII CCGG 1 cut(s) 315
HgaI GACGC 2 cut(s) 62, 320
HhaI GCGC 1 cut(s) 92
Hin1I GRCGYC 4 cut(s) 54, 90, 312, 837
Hin1II CATG 7 cut(s) 85, 230, 549, 624, 664, 678, 1051
Hin6I GCGC 1 cut(s) 90
HinP1I GCGC 1 cut(s) 90
HindIII AAGCTT 1 cut(s) 534
HinfI GANTC 3 cut(s) 38, 107, 179
HpaII CCGG 1 cut(s) 315
HphI GGTGA 4 cut(s) 64, 860, 991, 1063
Hpy166II GTNNAC 2 cut(s) 601, 801
Hpy188I TCNGA 3 cut(s) 37, 354, 489
Hpy188III TCNNGA 5 cut(s) 50, 129, 176, 227, 1018
Hpy8I GTNNAC 2 cut(s) 601, 801
Hpy99I CGWCG 1 cut(s) 842
HpyAV CCTTC 2 cut(s) 130, 470
HpyCH4III ACNGT 4 cut(s) 150, 798, 936, 1036
HpyCH4IV ACGT 3 cut(s) 290, 378, 837
HpyCH4V TGCA 6 cut(s) 280, 476, 736, 751, 812, 907
HpyF10VI GCNNNNNNNGC 3 cut(s) 62, 160, 542
HpyF3I CTNAG 4 cut(s) 109, 353, 488, 593
HpySE526I ACGT 3 cut(s) 290, 378, 837
Hsp92I GRCGYC 4 cut(s) 54, 90, 312, 837
Hsp92II CATG 7 cut(s) 85, 230, 549, 624, 664, 678, 1051
HspAI GCGC 1 cut(s) 90
KasI GGCGCC 1 cut(s) 89
Kzo9I GATC 4 cut(s) 244, 439, 491, 1014
LguI GCTCTTC 1 cut(s) 17
LweI GCATC 2 cut(s) 500, 738
MaeI CTAG 1 cut(s) 390
MaeII ACGT 3 cut(s) 290, 378, 837
MaeIII GTNAC 3 cut(s) 70, 99, 964
MalI GATC 4 cut(s) 246, 441, 493, 1016
MboI GATC 4 cut(s) 244, 439, 491, 1014
MboII GAAGA 6 cut(s) 28, 34, 209, 281, 284, 317
MfeI CAATTG 1 cut(s) 872
MflI RGATCY 2 cut(s) 244, 491
MhlI GDGCHC 3 cut(s) 29, 169, 706
MlsI TGGCCA 1 cut(s) 659
MluCI AATT 5 cut(s) 697, 807, 872, 1002, 1100
MluNI TGGCCA 1 cut(s) 659
Mly113I GGCGCC 1 cut(s) 90
MlyI GAGTC 1 cut(s) 101
MmeI TCCRAC 2 cut(s) 427, 907
Mox20I TGGCCA 1 cut(s) 659
MscI TGGCCA 1 cut(s) 659
MseI TTAA 3 cut(s) 414, 942, 1001
MslI CAYNNNNRTG 2 cut(s) 225, 642
Msp20I TGGCCA 1 cut(s) 659
MspA1I CMGCKG 1 cut(s) 857
MspCI CTTAAG 1 cut(s) 941
MspI CCGG 1 cut(s) 315
MspR9I CCNGG 1 cut(s) 542
MunI CAATTG 1 cut(s) 872
MvaI CCWGG 1 cut(s) 542
MwoI GCNNNNNNNGC 3 cut(s) 62, 160, 542
NarI GGCGCC 1 cut(s) 90
NcoI CCATGG 3 cut(s) 81, 620, 660
NdeII GATC 4 cut(s) 244, 439, 491, 1014
NlaIII CATG 7 cut(s) 85, 230, 549, 624, 664, 678, 1051
NlaIV GGNNCC 2 cut(s) 91, 246
NmuCI GTSAC 1 cut(s) 70
OliI CACNNNNGTG 1 cut(s) 642
PagI TCATGA 1 cut(s) 226
PaqCI CACCTGC 1 cut(s) 967
PciSI GCTCTTC 1 cut(s) 17
PfeI GAWTC 2 cut(s) 38, 179
PkrI GCNGC 1 cut(s) 194
Ple19I CGATCG 1 cut(s) 1017
PleI GAGTC 1 cut(s) 101
PluTI GGCGCC 1 cut(s) 93
PmaCI CACGTG 1 cut(s) 291
PmlI CACGTG 1 cut(s) 291
PpsI GAGTC 1 cut(s) 101
Ppu21I YACGTR 1 cut(s) 291
PshBI ATTAAT 1 cut(s) 1001
PsiI TTATAA 1 cut(s) 902
Psp124BI GAGCTC 1 cut(s) 29
Psp6I CCWGG 1 cut(s) 540
PspCI CACGTG 1 cut(s) 291
PspGI CCWGG 1 cut(s) 540
PspN4I GGNNCC 2 cut(s) 91, 246
PspPI GGNCC 2 cut(s) 285, 368
PstNI CAGNNNCTG 1 cut(s) 796
PsuI RGATCY 2 cut(s) 244, 491
PvuI CGATCG 1 cut(s) 1017
PvuII CAGCTG 1 cut(s) 857
RsaI GTAC 1 cut(s) 1038
RsaNI GTAC 1 cut(s) 1037
RseI CAYNNNNRTG 2 cut(s) 225, 642
SacI GAGCTC 1 cut(s) 29
SapI GCTCTTC 1 cut(s) 17
SaqAI TTAA 3 cut(s) 414, 942, 1001
SatI GCNGC 1 cut(s) 193
Sau3AI GATC 4 cut(s) 244, 439, 491, 1014
Sau96I GGNCC 2 cut(s) 285, 368
SchI GAGTC 1 cut(s) 101
ScrFI CCNGG 1 cut(s) 542
SduI GDGCHC 3 cut(s) 29, 169, 706
SfaNI GCATC 2 cut(s) 500, 738
SfcI CTRYAG 1 cut(s) 932
SfoI GGCGCC 1 cut(s) 91
SinI GGWCC 1 cut(s) 368
SmiMI CAYNNNNRTG 2 cut(s) 225, 642
SmlI CTYRAG 3 cut(s) 66, 407, 941
SmoI CTYRAG 3 cut(s) 66, 407, 941
Sse9I AATT 5 cut(s) 697, 807, 872, 1002, 1100
SsiI CCGC 3 cut(s) 190, 193, 990
SspDI GGCGCC 1 cut(s) 89
SspMI CTAG 1 cut(s) 390
SstI GAGCTC 1 cut(s) 29
StyD4I CCNGG 1 cut(s) 540
StyI CCWWGG 3 cut(s) 81, 620, 660
TaaI ACNGT 4 cut(s) 150, 798, 936, 1036
TaiI ACGT 3 cut(s) 293, 381, 840
TaqI TCGA 4 cut(s) 177, 442, 805, 1058
TasI AATT 5 cut(s) 697, 807, 872, 1002, 1100
TatI WGTACW 1 cut(s) 1036
TauI GCSGC 1 cut(s) 195
TfiI GAWTC 2 cut(s) 38, 179
Tru1I TTAA 3 cut(s) 414, 942, 1001
Tru9I TTAA 3 cut(s) 414, 942, 1001
TscAI CASTG 1 cut(s) 571
TseFI GTSAC 1 cut(s) 70
Tsp45I GTSAC 1 cut(s) 70
TspDTI ATGAA 4 cut(s) 35, 112, 209, 1091
TspGWI ACGGA 4 cut(s) 188, 317, 321, 618
TspRI CASTG 1 cut(s) 571
Vha464I CTTAAG 1 cut(s) 941
VpaK11BI GGWCC 1 cut(s) 368
VspI ATTAAT 1 cut(s) 1001
XmiI GTMKAC 1 cut(s) 800
XspI CTAG 1 cut(s) 390
ZraI GACGTC 1 cut(s) 838
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.