Tyrosyl-DNA phosphodiesterase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G07400 AT5G07400 AT5G07400 AT5G07400 AT5G07400 AT5G07400 AT5G07400 AT5G07400 |
| fragaria_vesca | FvH4_5g10030 |
| malus_domestica | MD06G1128300.v1.1 MD09G1063600.v1.1 |
| prunus_persica | Prupe.5G138100_v2.0.a1 |
| pyrus_communis | pycom06g11850 |
| rosa_chinensis | RchiOBHm_Chr7g0188231 |
| rosa_laevigata | RLG00000002473 RLG00000004716 |
| rosa_multiflora | Rmu_sc0008750.1_g000014 |
| rosa_roxburghii | Rroxscaffold_3G00266590 |
| rosa_rugosa | Rorug06G0489000 Rorug06G0489300 |
| rosa_samantha | Rh7AG093600 Rh7BG095000 Rh7CG095400 Rh7DG095500 Rh7DG095600 |
| rosa_wichuraiana | Rw7G008060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1830 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 989 |
| Acc36I | ACCTGC | 1 cut(s) | 2077 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 1566, 1593, 3077 |
| AccI | GTMKAC | 2 cut(s) | 633, 3297 |
| AccII | CGCG | 2 cut(s) | 267, 1464 |
| AccIII | TCCGGA | 2 cut(s) | 202, 1039 |
| AciI | CCGC | 8 cut(s) | 88, 226, 265, 440, 977, 1136, 1462, 2841 |
| AcoI | YGGCCR | 3 cut(s) | 28, 223, 1557 |
| AcsI | RAATTY | 7 cut(s) | 490, 667, 1400, 1549, 1904, 2489, 2534 |
| AcuI | CTGAAG | 2 cut(s) | 873, 2565 |
| AdeI | CACNNNGTG | 1 cut(s) | 1566 |
| AfaI | GTAC | 6 cut(s) | 722, 915, 1734, 2067, 2271, 2383 |
| AfeI | AGCGCT | 2 cut(s) | 106, 2578 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 170, 202, 817, 818, 1566, 1593, 2564, 3077 |
| AflII | CTTAAG | 1 cut(s) | 1985 |
| AflIII | ACRYGT | 1 cut(s) | 843 |
| AjiI | CACGTC | 3 cut(s) | 436, 846, 1868 |
| AjnI | CCWGG | 5 cut(s) | 1138, 1853, 1885, 2867, 3082 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2118, 2150 |
| Alw21I | GWGCWC | 4 cut(s) | 21, 1621, 1885, 2357 |
| Alw44I | GTGCAC | 2 cut(s) | 1617, 1881 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2513 |
| Ama87I | CYCGRG | 3 cut(s) | 627, 676, 1436 |
| Aor13HI | TCCGGA | 2 cut(s) | 202, 1039 |
| Aor51HI | AGCGCT | 2 cut(s) | 106, 2578 |
| ApaLI | GTGCAC | 2 cut(s) | 1617, 1881 |
| ApoI | RAATTY | 7 cut(s) | 490, 667, 1400, 1549, 1904, 2489, 2534 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 2432, 2464, 2585, 2617 |
| AseI | ATTAAT | 1 cut(s) | 2883 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1384 |
| AspLEI | GCGC | 4 cut(s) | 107, 693, 2462, 2579 |
| AspS9I | GGNCC | 6 cut(s) | 347, 926, 1177, 1744, 2297, 3080 |
| AsuC2I | CCSGG | 4 cut(s) | 628, 629, 789, 1815 |
| AsuHPI | GGTGA | 6 cut(s) | 77, 947, 974, 1125, 1380, 2974 |
| AsuII | TTCGAA | 1 cut(s) | 727 |
| AvaI | CYCGRG | 3 cut(s) | 627, 676, 1436 |
| AvaII | GGWCC | 2 cut(s) | 347, 2297 |
| AxyI | CCTNAGG | 1 cut(s) | 2006 |
| BaeGI | GKGCMC | 3 cut(s) | 1621, 1885, 3016 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1716, 1749 |
| BalI | TGGCCA | 2 cut(s) | 30, 1559 |
| BamHI | GGATCC | 1 cut(s) | 758 |
| BanII | GRGCYC | 1 cut(s) | 2357 |
| BbsI | GAAGAC | 1 cut(s) | 244 |
| Bbv12I | GWGCWC | 4 cut(s) | 21, 1621, 1885, 2357 |
| BccI | CCATC | 7 cut(s) | 207, 449, 1085, 1323, 1494, 1595, 2999 |
| BceAI | ACGGC | 1 cut(s) | 346 |
| BciT130I | CCWGG | 5 cut(s) | 1140, 1855, 1887, 2869, 3084 |
| BclI | TGATCA | 1 cut(s) | 1873 |
| BcnI | CCSGG | 4 cut(s) | 628, 629, 789, 1815 |
| BfaI | CTAG | 5 cut(s) | 1311, 1737, 2154, 2580, 2915 |
| BfmI | CTRYAG | 4 cut(s) | 2070, 2241, 2399, 2514 |
| BfoI | RGCGCY | 2 cut(s) | 108, 2580 |
| BfrI | CTTAAG | 1 cut(s) | 1985 |
| BfuAI | ACCTGC | 1 cut(s) | 2077 |
| BlpI | GCTNAGC | 1 cut(s) | 701 |
| BmcAI | AGTACT | 1 cut(s) | 915 |
| Bme1390I | CCNGG | 9 cut(s) | 628, 629, 789, 1140, 1815, 1855, 1887, 2869, 3084 |
| Bme18I | GGWCC | 2 cut(s) | 347, 2297 |
| BmeT110I | CYCGRG | 3 cut(s) | 627, 676, 1436 |
| BmgBI | CACGTC | 3 cut(s) | 436, 846, 1868 |
| BmgT120I | GGNCC | 6 cut(s) | 347, 926, 1177, 1744, 2297, 3080 |
| BmiI | GGNNCC | 4 cut(s) | 348, 760, 2298, 3290 |
| BmrFI | CCNGG | 9 cut(s) | 628, 629, 789, 1140, 1815, 1855, 1887, 2869, 3084 |
| BmrI | ACTGGG | 2 cut(s) | 989, 1741 |
| BmuI | ACTGGG | 2 cut(s) | 989, 1741 |
| BpiI | GAAGAC | 1 cut(s) | 244 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2708 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 701 |
| Bpu14I | TTCGAA | 1 cut(s) | 727 |
| BpuEI | CTTGAG | 1 cut(s) | 2788 |
| BpuMI | CCSGG | 4 cut(s) | 628, 629, 789, 1815 |
| BsaBI | GATNNNNATC | 1 cut(s) | 459 |
| BsaI | GGTCTC | 3 cut(s) | 472, 1010, 2179 |
| BsaJI | CCNNGG | 8 cut(s) | 577, 627, 1437, 1886, 1909, 2529, 2868, 3177 |
| BsaWI | WCCGGW | 5 cut(s) | 170, 178, 202, 361, 1039 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 170, 202, 817, 818, 1566, 1593, 2564, 3077 |
| Bse1I | ACTGG | 5 cut(s) | 921, 995, 1322, 1704, 1747 |
| Bse21I | CCTNAGG | 1 cut(s) | 2006 |
| Bse3DI | GCAATG | 4 cut(s) | 654, 760, 1129, 1476 |
| Bse8I | GATNNNNATC | 1 cut(s) | 459 |
| BseAI | TCCGGA | 2 cut(s) | 202, 1039 |
| BseBI | CCWGG | 5 cut(s) | 1140, 1855, 1887, 2869, 3084 |
| BseDI | CCNNGG | 8 cut(s) | 577, 627, 1437, 1886, 1909, 2529, 2868, 3177 |
| BseJI | GATNNNNATC | 1 cut(s) | 459 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 170, 202, 817, 818, 1566, 1593, 2564, 3077 |
| BseMI | GCAATG | 4 cut(s) | 654, 760, 1129, 1476 |
| BseMII | CTCAG | 7 cut(s) | 1005, 1338, 2020, 2348, 2722, 3129, 3267 |
| BseNI | ACTGG | 5 cut(s) | 921, 995, 1322, 1704, 1747 |
| BseRI | GAGGAG | 1 cut(s) | 3275 |
| BseSI | GKGCMC | 3 cut(s) | 1621, 1885, 3016 |
| BseX3I | CGGCCG | 1 cut(s) | 223 |
| BseYI | CCCAGC | 1 cut(s) | 2829 |
| BsgI | GTGCAG | 2 cut(s) | 706, 2880 |
| Bsh1236I | CGCG | 2 cut(s) | 267, 1464 |
| Bsh1285I | CGRYCG | 3 cut(s) | 222, 226, 262 |
| BsiEI | CGRYCG | 3 cut(s) | 222, 226, 262 |
| BsiHKAI | GWGCWC | 4 cut(s) | 21, 1621, 1885, 2357 |
| BsiHKCI | CYCGRG | 3 cut(s) | 627, 676, 1436 |
| BsiSI | CCGG | 9 cut(s) | 171, 179, 203, 362, 628, 788, 1040, 1217, 1815 |
| BsiWI | CGTACG | 1 cut(s) | 720 |
| BslFI | GGGAC | 4 cut(s) | 977, 1618, 2310, 2886 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 170, 202, 817, 818, 1566, 1593, 2564, 3077 |
| BsmBI | CGTCTC | 4 cut(s) | 45, 83, 165, 2785 |
| BsmFI | GGGAC | 4 cut(s) | 977, 1618, 2310, 2886 |
| BsmI | GAATGC | 3 cut(s) | 2647, 2673, 2926 |
| Bso31I | GGTCTC | 3 cut(s) | 472, 1010, 2179 |
| BsoBI | CYCGRG | 3 cut(s) | 627, 676, 1436 |
| Bsp119I | TTCGAA | 1 cut(s) | 727 |
| Bsp1286I | GDGCHC | 5 cut(s) | 21, 1621, 1885, 2357, 3016 |
| Bsp13I | TCCGGA | 2 cut(s) | 202, 1039 |
| Bsp1407I | TGTACA | 1 cut(s) | 2381 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 701 |
| BspACI | CCGC | 8 cut(s) | 88, 226, 265, 440, 977, 1136, 1462, 2841 |
| BspCNI | CTCAG | 7 cut(s) | 1006, 1339, 2019, 2347, 2721, 3130, 3268 |
| BspEI | TCCGGA | 2 cut(s) | 202, 1039 |
| BspFNI | CGCG | 2 cut(s) | 267, 1464 |
| BspHI | TCATGA | 1 cut(s) | 2728 |
| BspLI | GGNNCC | 4 cut(s) | 348, 760, 2298, 3290 |
| BspMAI | CTGCAG | 3 cut(s) | 2074, 2245, 2518 |
| BspMI | ACCTGC | 1 cut(s) | 2077 |
| BspT104I | TTCGAA | 1 cut(s) | 727 |
| BspTI | CTTAAG | 1 cut(s) | 1985 |
| BspTNI | GGTCTC | 3 cut(s) | 472, 1010, 2179 |
| BsrDI | GCAATG | 4 cut(s) | 654, 760, 1129, 1476 |
| BsrGI | TGTACA | 1 cut(s) | 2381 |
| BsrI | ACTGG | 5 cut(s) | 921, 995, 1322, 1704, 1747 |
| BssECI | CCNNGG | 8 cut(s) | 577, 627, 1437, 1886, 1909, 2529, 2868, 3177 |
| BssT1I | CCWWGG | 2 cut(s) | 577, 1909 |
| Bst2UI | CCWGG | 5 cut(s) | 1140, 1855, 1887, 2869, 3084 |
| Bst4CI | ACNGT | 8 cut(s) | 23, 318, 638, 905, 935, 1085, 1330, 1566 |
| Bst6I | CTCTTC | 7 cut(s) | 360, 1192, 2541, 2935, 3186, 3243, 3252 |
| BstAFI | CTTAAG | 1 cut(s) | 1985 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1482, 2679, 2770 |
| BstAUI | TGTACA | 1 cut(s) | 2381 |
| BstBI | TTCGAA | 1 cut(s) | 727 |
| BstC8I | GCNNGC | 5 cut(s) | 689, 1483, 1995, 3066, 3096 |
| BstEII | GGTNACC | 1 cut(s) | 962 |
| BstFNI | CGCG | 2 cut(s) | 267, 1464 |
| BstH2I | RGCGCY | 2 cut(s) | 108, 2580 |
| BstHHI | GCGC | 4 cut(s) | 107, 693, 2462, 2579 |
| BstMCI | CGRYCG | 3 cut(s) | 222, 226, 262 |
| BstNI | CCWGG | 5 cut(s) | 1140, 1855, 1887, 2869, 3084 |
| BstNSI | RCATGY | 3 cut(s) | 2288, 2342, 2649 |
| BstPI | GGTNACC | 1 cut(s) | 962 |
| BstSCI | CCNGG | 9 cut(s) | 626, 627, 787, 1138, 1813, 1853, 1885, 2867, 3082 |
| BstSFI | CTRYAG | 4 cut(s) | 2070, 2241, 2399, 2514 |
| BstSLI | GKGCMC | 3 cut(s) | 1621, 1885, 3016 |
| BstUI | CGCG | 2 cut(s) | 267, 1464 |
| BstV2I | GAAGAC | 1 cut(s) | 244 |
| BstX2I | RGATCY | 5 cut(s) | 173, 581, 758, 782, 2525 |
| BstYI | RGATCY | 5 cut(s) | 173, 581, 758, 782, 2525 |
| BstZI | CGGCCG | 1 cut(s) | 223 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2006 |
| BtgZI | GCGATG | 1 cut(s) | 720 |
| BtrI | CACGTC | 3 cut(s) | 436, 846, 1868 |
| BtsI | GCAGTG | 1 cut(s) | 2091 |
| BtsIMutI | CAGTG | 5 cut(s) | 901, 1571, 1754, 2091, 2863 |
| BveI | ACCTGC | 1 cut(s) | 2077 |
| Cac8I | GCNNGC | 5 cut(s) | 689, 1483, 1995, 3066, 3096 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2513 |
| CciI | TCATGA | 1 cut(s) | 2728 |
| CfoI | GCGC | 4 cut(s) | 107, 693, 2462, 2579 |
| Cfr13I | GGNCC | 6 cut(s) | 347, 926, 1177, 1744, 2297, 3080 |
| Cfr9I | CCCGGG | 1 cut(s) | 627 |
| CseI | GACGC | 2 cut(s) | 256, 2802 |
| Csp6I | GTAC | 6 cut(s) | 721, 914, 1733, 2066, 2270, 2382 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1536, 1571 |
| CviQI | GTAC | 6 cut(s) | 721, 914, 1733, 2066, 2270, 2382 |
| DraI | TTTAAA | 1 cut(s) | 2901 |
| DraIII | CACNNNGTG | 1 cut(s) | 1566 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 989 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 989 |
| EaeI | YGGCCR | 3 cut(s) | 28, 223, 1557 |
| EagI | CGGCCG | 1 cut(s) | 223 |
| Eam1104I | CTCTTC | 7 cut(s) | 360, 1192, 2541, 2935, 3186, 3243, 3252 |
| EarI | CTCTTC | 7 cut(s) | 360, 1192, 2541, 2935, 3186, 3243, 3252 |
| Ecl136II | GAGCTC | 1 cut(s) | 2355 |
| EclXI | CGGCCG | 1 cut(s) | 223 |
| Eco130I | CCWWGG | 2 cut(s) | 577, 1909 |
| Eco147I | AGGCCT | 2 cut(s) | 2388, 3094 |
| Eco24I | GRGCYC | 1 cut(s) | 2357 |
| Eco31I | GGTCTC | 3 cut(s) | 472, 1010, 2179 |
| Eco47I | GGWCC | 2 cut(s) | 347, 2297 |
| Eco47III | AGCGCT | 2 cut(s) | 106, 2578 |
| Eco52I | CGGCCG | 1 cut(s) | 223 |
| Eco53kI | GAGCTC | 1 cut(s) | 2355 |
| Eco57I | CTGAAG | 2 cut(s) | 873, 2565 |
| Eco81I | CCTNAGG | 1 cut(s) | 2006 |
| Eco88I | CYCGRG | 3 cut(s) | 627, 676, 1436 |
| Eco91I | GGTNACC | 1 cut(s) | 962 |
| EcoICRI | GAGCTC | 1 cut(s) | 2355 |
| EcoO109I | RGGNCCY | 2 cut(s) | 347, 2297 |
| EcoO65I | GGTNACC | 1 cut(s) | 962 |
| EcoRI | GAATTC | 1 cut(s) | 2534 |
| EcoRII | CCWGG | 5 cut(s) | 1138, 1853, 1885, 2867, 3082 |
| EcoT14I | CCWWGG | 2 cut(s) | 577, 1909 |
| EcoT22I | ATGCAT | 3 cut(s) | 900, 2647, 2818 |
| EcoT38I | GRGCYC | 1 cut(s) | 2357 |
| ErhI | CCWWGG | 2 cut(s) | 577, 1909 |
| Esp3I | CGTCTC | 4 cut(s) | 45, 83, 165, 2785 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1369, 1401, 2220, 2252 |
| FaqI | GGGAC | 4 cut(s) | 977, 1618, 2310, 2886 |
| FauNDI | CATATG | 1 cut(s) | 3055 |
| FbaI | TGATCA | 1 cut(s) | 1873 |
| FblI | GTMKAC | 2 cut(s) | 633, 3297 |
| FriOI | GRGCYC | 1 cut(s) | 2357 |
| FspBI | CTAG | 5 cut(s) | 1311, 1737, 2154, 2580, 2915 |
| GlaI | GCGC | 4 cut(s) | 106, 692, 2461, 2578 |
| GsaI | CCCAGC | 1 cut(s) | 2833 |
| HaeII | RGCGCY | 2 cut(s) | 108, 2580 |
| HapII | CCGG | 9 cut(s) | 171, 179, 203, 362, 628, 788, 1040, 1217, 1815 |
| HgaI | GACGC | 2 cut(s) | 256, 2802 |
| HhaI | GCGC | 4 cut(s) | 107, 693, 2462, 2579 |
| Hin6I | GCGC | 4 cut(s) | 105, 691, 2460, 2577 |
| HinP1I | GCGC | 4 cut(s) | 105, 691, 2460, 2577 |
| HincII | GTYRAC | 2 cut(s) | 328, 885 |
| HindII | GTYRAC | 2 cut(s) | 328, 885 |
| HindIII | AAGCTT | 2 cut(s) | 1982, 2031 |
| HpaII | CCGG | 9 cut(s) | 171, 179, 203, 362, 628, 788, 1040, 1217, 1815 |
| HphI | GGTGA | 6 cut(s) | 77, 947, 974, 1125, 1380, 2974 |
| Hpy99I | CGWCG | 2 cut(s) | 121, 272 |
| HpyAV | CCTTC | 4 cut(s) | 2673, 3100, 3247, 3259 |
| HpyCH4III | ACNGT | 8 cut(s) | 23, 318, 638, 905, 935, 1085, 1330, 1566 |
| HpyCH4IV | ACGT | 6 cut(s) | 158, 435, 723, 845, 1867, 3240 |
| HpySE526I | ACGT | 6 cut(s) | 158, 435, 723, 845, 1867, 3240 |
| HspAI | GCGC | 4 cut(s) | 105, 691, 2460, 2577 |
| Kpn2I | TCCGGA | 2 cut(s) | 202, 1039 |
| Ksp22I | TGATCA | 1 cut(s) | 1873 |
| LmnI | GCTCC | 4 cut(s) | 1219, 2574, 3073, 3288 |
| MaeI | CTAG | 5 cut(s) | 1311, 1737, 2154, 2580, 2915 |
| MaeII | ACGT | 6 cut(s) | 158, 435, 723, 845, 1867, 3240 |
| MaeIII | GTNAC | 6 cut(s) | 569, 839, 962, 1274, 1324, 1576 |
| MfeI | CAATTG | 1 cut(s) | 2040 |
| MflI | RGATCY | 5 cut(s) | 173, 581, 758, 782, 2525 |
| MhlI | GDGCHC | 5 cut(s) | 21, 1621, 1885, 2357, 3016 |
| MlsI | TGGCCA | 2 cut(s) | 30, 1559 |
| MluNI | TGGCCA | 2 cut(s) | 30, 1559 |
| MmeI | TCCRAC | 3 cut(s) | 1337, 2552, 2645 |
| Mox20I | TGGCCA | 2 cut(s) | 30, 1559 |
| Mph1103I | ATGCAT | 3 cut(s) | 900, 2647, 2818 |
| MroI | TCCGGA | 2 cut(s) | 202, 1039 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1384 |
| MscI | TGGCCA | 2 cut(s) | 30, 1559 |
| MseI | TTAA | 9 cut(s) | 135, 384, 816, 1412, 1724, 1986, 2048, 2883, 2900 |
| MslI | CAYNNNNRTG | 7 cut(s) | 24, 144, 604, 835, 951, 1614, 2780 |
| Msp20I | TGGCCA | 2 cut(s) | 30, 1559 |
| MspA1I | CMGCKG | 2 cut(s) | 2513, 2864 |
| MspCI | CTTAAG | 1 cut(s) | 1985 |
| MspI | CCGG | 9 cut(s) | 171, 179, 203, 362, 628, 788, 1040, 1217, 1815 |
| MspR9I | CCNGG | 9 cut(s) | 628, 629, 789, 1140, 1815, 1855, 1887, 2869, 3084 |
| MssI | GTTTAAAC | 1 cut(s) | 2901 |
| MunI | CAATTG | 1 cut(s) | 2040 |
| Mva1269I | GAATGC | 3 cut(s) | 2647, 2673, 2926 |
| MvaI | CCWGG | 5 cut(s) | 1140, 1855, 1887, 2869, 3084 |
| MvnI | CGCG | 2 cut(s) | 267, 1464 |
| NciI | CCSGG | 4 cut(s) | 628, 629, 789, 1815 |
| NdeI | CATATG | 1 cut(s) | 3055 |
| NlaIV | GGNNCC | 4 cut(s) | 348, 760, 2298, 3290 |
| NmeAIII | GCCGAG | 2 cut(s) | 123, 1783 |
| NmuCI | GTSAC | 5 cut(s) | 569, 839, 962, 1274, 1576 |
| NsiI | ATGCAT | 3 cut(s) | 900, 2647, 2818 |
| NspI | RCATGY | 3 cut(s) | 2288, 2342, 2649 |
| NspV | TTCGAA | 1 cut(s) | 727 |
| PaeR7I | CTCGAG | 1 cut(s) | 676 |
| PagI | TCATGA | 1 cut(s) | 2728 |
| PceI | AGGCCT | 2 cut(s) | 2388, 3094 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 255 |
| PctI | GAATGC | 3 cut(s) | 2647, 2673, 2926 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1384 |
| Pfl23II | CGTACG | 1 cut(s) | 720 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 1566, 1593, 3077 |
| PfoI | TCCNGGA | 1 cut(s) | 1813 |
| Ple19I | CGATCG | 2 cut(s) | 222, 262 |
| PmeI | GTTTAAAC | 1 cut(s) | 2901 |
| PpuMI | RGGWCCY | 2 cut(s) | 347, 2297 |
| PshBI | ATTAAT | 1 cut(s) | 2883 |
| PsiI | TTATAA | 1 cut(s) | 1830 |
| Psp124BI | GAGCTC | 1 cut(s) | 2357 |
| Psp5II | RGGWCCY | 2 cut(s) | 347, 2297 |
| Psp6I | CCWGG | 5 cut(s) | 1138, 1853, 1885, 2867, 3082 |
| PspEI | GGTNACC | 1 cut(s) | 962 |
| PspFI | CCCAGC | 1 cut(s) | 2829 |
| PspGI | CCWGG | 5 cut(s) | 1138, 1853, 1885, 2867, 3082 |
| PspLI | CGTACG | 1 cut(s) | 720 |
| PspN4I | GGNNCC | 4 cut(s) | 348, 760, 2298, 3290 |
| PspPI | GGNCC | 6 cut(s) | 347, 926, 1177, 1744, 2297, 3080 |
| PspPPI | RGGWCCY | 2 cut(s) | 347, 2297 |
| PstI | CTGCAG | 3 cut(s) | 2074, 2245, 2518 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2513 |
| PsuI | RGATCY | 5 cut(s) | 173, 581, 758, 782, 2525 |
| PvuI | CGATCG | 2 cut(s) | 222, 262 |
| PvuII | CAGCTG | 2 cut(s) | 2513, 2864 |
| RsaI | GTAC | 6 cut(s) | 722, 915, 1734, 2067, 2271, 2383 |
| RsaNI | GTAC | 6 cut(s) | 721, 914, 1733, 2066, 2270, 2382 |
| RseI | CAYNNNNRTG | 7 cut(s) | 24, 144, 604, 835, 951, 1614, 2780 |
| SacI | GAGCTC | 1 cut(s) | 2357 |
| SaqAI | TTAA | 9 cut(s) | 135, 384, 816, 1412, 1724, 1986, 2048, 2883, 2900 |
| Sau96I | GGNCC | 6 cut(s) | 347, 926, 1177, 1744, 2297, 3080 |
| ScaI | AGTACT | 1 cut(s) | 915 |
| ScrFI | CCNGG | 9 cut(s) | 628, 629, 789, 1140, 1815, 1855, 1887, 2869, 3084 |
| SduI | GDGCHC | 5 cut(s) | 21, 1621, 1885, 2357, 3016 |
| SfcI | CTRYAG | 4 cut(s) | 2070, 2241, 2399, 2514 |
| Sfr274I | CTCGAG | 1 cut(s) | 676 |
| SfuI | TTCGAA | 1 cut(s) | 727 |
| SinI | GGWCC | 2 cut(s) | 347, 2297 |
| SlaI | CTCGAG | 1 cut(s) | 676 |
| SmaI | CCCGGG | 1 cut(s) | 629 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 24, 144, 604, 835, 951, 1614, 2780 |
| SmlI | CTYRAG | 3 cut(s) | 676, 1985, 2803 |
| SmoI | CTYRAG | 3 cut(s) | 676, 1985, 2803 |
| SseBI | AGGCCT | 2 cut(s) | 2388, 3094 |
| SsiI | CCGC | 8 cut(s) | 88, 226, 265, 440, 977, 1136, 1462, 2841 |
| SspMI | CTAG | 5 cut(s) | 1311, 1737, 2154, 2580, 2915 |
| SstI | GAGCTC | 1 cut(s) | 2357 |
| StuI | AGGCCT | 2 cut(s) | 2388, 3094 |
| StyD4I | CCNGG | 9 cut(s) | 626, 627, 787, 1138, 1813, 1853, 1885, 2867, 3082 |
| StyI | CCWWGG | 2 cut(s) | 577, 1909 |
| TaaI | ACNGT | 8 cut(s) | 23, 318, 638, 905, 935, 1085, 1330, 1566 |
| TaiI | ACGT | 6 cut(s) | 161, 438, 726, 848, 1870, 3243 |
| TaqI | TCGA | 7 cut(s) | 116, 129, 310, 677, 727, 2307, 2538 |
| TaqII | GACCGA | 1 cut(s) | 1034 |
| TatI | WGTACW | 3 cut(s) | 913, 2269, 2381 |
| TauI | GCSGC | 2 cut(s) | 228, 267 |
| Tru1I | TTAA | 9 cut(s) | 135, 384, 816, 1412, 1724, 1986, 2048, 2883, 2900 |
| Tru9I | TTAA | 9 cut(s) | 135, 384, 816, 1412, 1724, 1986, 2048, 2883, 2900 |
| TscAI | CASTG | 5 cut(s) | 908, 1571, 1754, 2091, 2863 |
| TseFI | GTSAC | 5 cut(s) | 569, 839, 962, 1274, 1576 |
| Tsp45I | GTSAC | 5 cut(s) | 569, 839, 962, 1274, 1576 |
| TspGWI | ACGGA | 7 cut(s) | 69, 153, 580, 941, 1192, 2589, 2803 |
| TspMI | CCCGGG | 1 cut(s) | 627 |
| TspRI | CASTG | 5 cut(s) | 908, 1571, 1754, 2091, 2863 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 1566, 1593, 3077 |
| Vha464I | CTTAAG | 1 cut(s) | 1985 |
| VneI | GTGCAC | 2 cut(s) | 1617, 1881 |
| VpaK11BI | GGWCC | 2 cut(s) | 347, 2297 |
| VspI | ATTAAT | 1 cut(s) | 2883 |
| XapI | RAATTY | 7 cut(s) | 490, 667, 1400, 1549, 1904, 2489, 2534 |
| XceI | RCATGY | 3 cut(s) | 2288, 2342, 2649 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2932 |
| XhoI | CTCGAG | 1 cut(s) | 676 |
| XmaI | CCCGGG | 1 cut(s) | 627 |
| XmiI | GTMKAC | 2 cut(s) | 633, 3297 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1384 |
| XspI | CTAG | 5 cut(s) | 1311, 1737, 2154, 2580, 2915 |
| ZrmI | AGTACT | 1 cut(s) | 915 |
| Zsp2I | ATGCAT | 3 cut(s) | 900, 2647, 2818 |