Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0006613

Physical Location & Seq

Genomic Coordinates Forward (+)

8025626 .. 8027950

Gene Structure 2325 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG095500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1911 bp

ATGAAAGATTCATCGCCTTATAGCCATGACTCTAATCCTAGTATTAAGAATAAGAGAGTCCGAACCCATAGCTCCCTCATTCCTTGTAAGAAGCCGCGAACCCCGAGACCTCTCGGCGAACCAACCACGACGGCGGCGCTACTCGAATTGAAGCATCTCGACGTCCCTCTCACGTCTTCGGCGACCGATTCTCCGGTCAATTTCATCCGCCTCCACCCGGATCGGCCTTACACCATCGGCCGGAGCCCCCGCCGCTGCGATTTCGTGTTCGCCGACCGCCGCGTCGGGAGTCGACATTGCCAGGTTTTTTATGATTTTTTGAATCGGAAATTGTGTGTTGTTGATGGAGCGCTGGTTTCGATTTCTCAATTTAAGAGTCGGAGTGGTGGTGGTGTAGGTAGGGCTTCGTTGAATGGGGTTTTTGTGAATGGGATTAGGGTTAGGGGAGGTGAGGCGGTGGAGTTGAGCGATGGAGACCAGGTCTCGTTTGCTTGTTCAACTGGAAATTGTTGTAGCAATCCGGTTCGGATTGGATTTGTGATTCATAAGATTGTTTTTGAGGAAATGTATGTATCAGATAACTCCCAAGGATCTGTAATTGTATCAAATCCTAAGGGATGTAAAAGGATTTTTGCTTCTAGGGCCGACGGTGCGTCGTCTTCCCTCTTTACAAGAGCGAGCTTTCTCTTGAGTGAGTGCAGACGAATTTTGCGTAGTGATGACCCTATATCCTACATTAGGACACGTTGTAGATATTCTTTTGGCAATGGATTCAGTATAGATAATGTGATTCGAGCTCCGAGTTCTGATATTAGTAGATCCGGAGTAAAGCGGAAAGGATCAATGCTATGTGAAACCTCACAGATTTGTTGCAATGTGAAAAGTAAAGTGCAGTCAACTTCAGTGATGCAGCACTGTGATAGAGTAGTGTCTTCAGAATCAAACAGTGACCTAGCTGCTGTCTGTGTGCAAGGTGATGATTTAGATATGCAAGACGATGAAGTCCAAGTTCCTTCTGACACTCGTGTTGCTGATGGAAATTTTGGGACTTCATCTTTCAATTTGAGAAGTACGGATAATCTTCCTCATGTTGGCGATTTTGTTAAGGATAAGACTTGCAGCAAGAATGTTGGTCTACAACCTGGCAAGAACTTCTACCTGAATCGCCTTGCGTTTGAGGACCAGAGCTCTTCAAGTCGTCATTCTGTTATTTCCTTGCCAGAGCTTCTTCATCCTGTTCAAAGTATATCACAAATATTTATTGCAACGTTCACAAGTGACATTTTATGGTTTTTGTCAACCTGTGAGATTCCTAGCCATCTGCCAGTAACAGTTGCTTGCCATAATACAGAGAGATGTTGGAGTTCAAGCACTGAAAATAGAACATCTGCACCTTACCCAGAATTTCCAAACTTAGTTGTAGTGCATCCCCCGTTCCCTGAGGCCATAGCTTTTGGTGAAGACCTGAAAAGACATGGCATTGGTTGCCATCATCCAAAACTGTTTGTTTTACAGAGAGATGATAATATTCGTGTTATCATTACCTCCGCAAATTTAGTGCCAACACAGTGGAATGCAGTAACCAATACCATCTGGTGGCAAGATTTCCCTCGCAGAAGTGCTCCTGATTATTCATCACTTTTTACTCAATTTTCCGGCAGGGAAGTAAATCAAGACTCAAAATCGGATTTTGTTTCTTATTTGGCTGGATTTATAGCAACTCTACTGACCGACATACCAAGTCAGGCCCAGTGGATTGTTGAGTTGGCAAAGTATGATTTTGGAGGGGCAATGGGACATTTGGTTGCTTCTGTACCTGGAATCCATTCATATAAAACTCCCTATATAATGGAATCCAGACACTATGCCTGTGTAAGTGTTTTCAGTCCTGCATCGTTTTGGTTGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FHA HIRAN Tyr-DNA_phospho

Protein Analysis

636

Amino Acids

70.4

Weight (kDa)

8.49

Isoelectric Point (pI)

50.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FHA	PF00498	77 - 163	2.3e-11	FHA domain
Tyr-DNA_phospho	PF06087	393 - 612	3.2e-24	Tyrosyl-DNA phosphodiesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006613)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07400 AT5G07400 AT5G07400 AT5G07400 AT5G07400 AT5G07400 AT5G07400 AT5G07400
fragaria_vesca	FvH4_5g10030
malus_domestica	MD06G1128300.v1.1 MD09G1063600.v1.1
prunus_persica	Prupe.5G138100_v2.0.a1
pyrus_communis	pycom06g11850
rosa_chinensis	RchiOBHm_Chr7g0188231
rosa_laevigata	RLG00000002473 RLG00000004716
rosa_multiflora	Rmu_sc0008750.1_g000014
rosa_roxburghii	Rroxscaffold_3G00266590
rosa_rugosa	Rorug06G0489000 Rorug06G0489300
rosa_samantha	Rh7AG093600 Rh7BG095000 Rh7CG095400 Rh7DG095500 Rh7DG095600
rosa_wichuraiana	Rw7G008060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	281, 1001
AatII	GACGTC	1 cut(s)	165
AccB7I	CCANNNNNTGG	1 cut(s)	1596
AccI	GTMKAC	2 cut(s)	292, 1135
AccII	CGCG	2 cut(s)	97, 282
AccIII	TCCGGA	1 cut(s)	821
AclI	AACGTT	1 cut(s)	1268
AclWI	GGATC	4 cut(s)	228, 598, 813, 847
AcoI	YGGCCR	1 cut(s)	238
AcsI	RAATTY	4 cut(s)	705, 1039, 1403, 1552
AcuI	CTGAAG	2 cut(s)	885, 918
AcyI	GRCGYC	1 cut(s)	162
AfaI	GTAC	2 cut(s)	1072, 1815
AfeI	AGCGCT	1 cut(s)	351
AfiI	CCNNNNNNNGG	5 cut(s)	217, 240, 738, 1091, 1596
AflIII	ACRYGT	1 cut(s)	743
AgsI	TTSAA	9 cut(s)	151, 322, 412, 498, 1060, 1194, 1241, 1368, 1906
AhdI	GACNNNNNGTC	1 cut(s)	652
AjiI	CACGTC	1 cut(s)	174
AjnI	CCWGG	4 cut(s)	300, 477, 1141, 1816
AluBI	AGCT	7 cut(s)	72, 681, 797, 956, 1188, 1225, 1451
AluI	AGCT	7 cut(s)	72, 681, 797, 956, 1188, 1225, 1451
Alw21I	GWGCWC	3 cut(s)	799, 1190, 1624
Alw26I	GTCTC	3 cut(s)	100, 468, 487
AlwI	GGATC	4 cut(s)	228, 598, 813, 847
Ama87I	CYCGRG	1 cut(s)	103
Aor13HI	TCCGGA	1 cut(s)	821
Aor51HI	AGCGCT	1 cut(s)	351
AoxI	GGCC	5 cut(s)	224, 238, 642, 1443, 1746
ApeKI	GCWGC	4 cut(s)	255, 910, 956, 1119
ApoI	RAATTY	4 cut(s)	705, 1039, 1403, 1552
Asp700I	GAANNNNTTC	1 cut(s)	1825
AspLEI	GCGC	2 cut(s)	139, 352
AspS9I	GGNCC	3 cut(s)	642, 1180, 1747
AsuC2I	CCSGG	1 cut(s)	218
AsuHPI	GGTGA	3 cut(s)	461, 986, 1469
AvaI	CYCGRG	1 cut(s)	103
AvaII	GGWCC	1 cut(s)	1180
AxyI	CCTNAGG	2 cut(s)	612, 1440
BanII	GRGCYC	3 cut(s)	248, 799, 1190
BauI	CACGAG	1 cut(s)	1023
BbsI	GAAGAC	4 cut(s)	168, 651, 924, 1467
Bbv12I	GWGCWC	3 cut(s)	799, 1190, 1624
BbvI	GCAGC	4 cut(s)	242, 922, 943, 1131
BccI	CCATC	7 cut(s)	242, 338, 464, 1028, 1326, 1497, 1598
BceAI	ACGGC	1 cut(s)	147
BciT130I	CCWGG	4 cut(s)	302, 479, 1143, 1818
BcnI	CCSGG	1 cut(s)	218
BcoDI	GTCTC	3 cut(s)	100, 468, 487
BfaI	CTAG	4 cut(s)	39, 639, 953, 1314
BfoI	RGCGCY	2 cut(s)	140, 353
BisI	GCNGC	8 cut(s)	95, 135, 253, 256, 280, 911, 957, 1120
BlsI	GCNGC	8 cut(s)	96, 136, 254, 257, 281, 912, 958, 1121
Bme1390I	CCNGG	5 cut(s)	218, 302, 479, 1143, 1818
Bme18I	GGWCC	1 cut(s)	1180
BmeRI	GACNNNNNGTC	1 cut(s)	652
BmeT110I	CYCGRG	1 cut(s)	103
BmgBI	CACGTC	1 cut(s)	174
BmgT120I	GGNCC	3 cut(s)	642, 1180, 1747
BmiI	GGNNCC	1 cut(s)	245
BmrFI	CCNGG	5 cut(s)	218, 302, 479, 1143, 1818
BmrI	ACTGGG	1 cut(s)	1744
BmsI	GCATC	4 cut(s)	163, 897, 1435, 1901
BmuI	ACTGGG	1 cut(s)	1744
BpiI	GAAGAC	4 cut(s)	168, 651, 924, 1467
BpuEI	CTTGAG	1 cut(s)	709
BpuMI	CCSGG	1 cut(s)	218
BsaHI	GRCGYC	1 cut(s)	162
BsaI	GGTCTC	3 cut(s)	100, 468, 487
BsaJI	CCNNGG	1 cut(s)	586
BsaWI	WCCGGW	3 cut(s)	193, 520, 821
BsaXI	ACNNNNNCTCC	8 cut(s)	175, 205, 339, 369, 373, 403, 465, 495
Bsc4I	CCNNNNNNNGG	5 cut(s)	217, 240, 738, 1091, 1596
Bse1I	ACTGG	3 cut(s)	505, 1325, 1750
Bse21I	CCTNAGG	2 cut(s)	612, 1440
Bse3DI	GCAATG	4 cut(s)	295, 772, 880, 1797
BseAI	TCCGGA	1 cut(s)	821
BseBI	CCWGG	4 cut(s)	302, 479, 1143, 1818
BseDI	CCNNGG	1 cut(s)	586
BseGI	GGATG	5 cut(s)	204, 623, 1231, 1426, 1492
BseLI	CCNNNNNNNGG	5 cut(s)	217, 240, 738, 1091, 1596
BseMI	GCAATG	4 cut(s)	295, 772, 880, 1797
BseMII	CTCAG	1 cut(s)	1431
BseNI	ACTGG	3 cut(s)	505, 1325, 1750
BseX3I	CGGCCG	1 cut(s)	238
BseXI	GCAGC	4 cut(s)	242, 922, 943, 1131
BsgI	GTGCAG	3 cut(s)	718, 911, 1374
Bsh1236I	CGCG	2 cut(s)	97, 282
Bsh1285I	CGRYCG	3 cut(s)	186, 241, 277
BshFI	GGCC	5 cut(s)	226, 240, 644, 1445, 1748
BsiEI	CGRYCG	3 cut(s)	186, 241, 277
BsiHKAI	GWGCWC	3 cut(s)	799, 1190, 1624
BsiHKCI	CYCGRG	1 cut(s)	103
BsiSI	CCGG	6 cut(s)	194, 218, 241, 521, 822, 1656
BslFI	GGGAC	3 cut(s)	149, 1060, 1809
BslI	CCNNNNNNNGG	5 cut(s)	217, 240, 738, 1091, 1596
BsmAI	GTCTC	3 cut(s)	100, 468, 487
BsmFI	GGGAC	3 cut(s)	149, 1060, 1809
BsmI	GAATGC	1 cut(s)	1579
BsnI	GGCC	5 cut(s)	226, 240, 644, 1445, 1748
Bso31I	GGTCTC	3 cut(s)	100, 468, 487
BsoBI	CYCGRG	1 cut(s)	103
Bsp1286I	GDGCHC	4 cut(s)	248, 799, 1190, 1624
Bsp13I	TCCGGA	1 cut(s)	821
Bsp143I	GATC	4 cut(s)	220, 590, 818, 839
BspANI	GGCC	5 cut(s)	226, 240, 644, 1445, 1748
BspCNI	CTCAG	1 cut(s)	1432
BspEI	TCCGGA	1 cut(s)	821
BspFNI	CGCG	2 cut(s)	97, 282
BspLI	GGNNCC	1 cut(s)	245
BspPI	GGATC	4 cut(s)	228, 598, 813, 847
BspQI	GCTCTTC	1 cut(s)	1195
BspTNI	GGTCTC	3 cut(s)	100, 468, 487
BsrDI	GCAATG	4 cut(s)	295, 772, 880, 1797
BsrI	ACTGG	3 cut(s)	505, 1325, 1750
BssECI	CCNNGG	1 cut(s)	586
BssMI	GATC	4 cut(s)	220, 590, 818, 839
BssNI	GRCGYC	1 cut(s)	162
BssSI	CACGAG	1 cut(s)	1023
BssT1I	CCWWGG	1 cut(s)	586
Bst2BI	CACGAG	1 cut(s)	1023
Bst2UI	CCWGG	4 cut(s)	302, 479, 1143, 1818
Bst4CI	ACNGT	6 cut(s)	650, 917, 947, 1333, 1503, 1569
Bst6I	CTCTTC	1 cut(s)	1195
BstACI	GRCGYC	1 cut(s)	162
BstAPI	GCANNNNNTGC	1 cut(s)	1485
BstC8I	GCNNGC	2 cut(s)	679, 1339
BstDEI	CTNAG	3 cut(s)	612, 1414, 1440
BstENI	CCTNNNNNAGG	1 cut(s)	736
BstF5I	GGATG	5 cut(s)	204, 623, 1231, 1426, 1492
BstFNI	CGCG	2 cut(s)	97, 282
BstH2I	RGCGCY	2 cut(s)	140, 353
BstHHI	GCGC	2 cut(s)	139, 352
BstKTI	GATC	4 cut(s)	223, 593, 821, 842
BstMAI	GTCTC	3 cut(s)	100, 468, 487
BstMBI	GATC	4 cut(s)	220, 590, 818, 839
BstMCI	CGRYCG	3 cut(s)	186, 241, 277
BstMWI	GCNNNNNNNGC	4 cut(s)	252, 641, 650, 1485
BstNI	CCWGG	4 cut(s)	302, 479, 1143, 1818
BstSCI	CCNGG	5 cut(s)	216, 300, 477, 1141, 1816
BstUI	CGCG	2 cut(s)	97, 282
BstV1I	GCAGC	4 cut(s)	242, 922, 943, 1131
BstV2I	GAAGAC	4 cut(s)	168, 651, 924, 1467
BstX2I	RGATCY	2 cut(s)	590, 818
BstXI	CCANNNNNNTGG	1 cut(s)	1569
BstYI	RGATCY	2 cut(s)	590, 818
BstZI	CGGCCG	1 cut(s)	238
Bsu36I	CCTNAGG	2 cut(s)	612, 1440
BsuRI	GGCC	5 cut(s)	226, 240, 644, 1445, 1748
BtgZI	GCGATG	1 cut(s)	483
BtrI	CACGTC	1 cut(s)	174
BtsCI	GGATG	5 cut(s)	204, 623, 1231, 1426, 1492
BtsIMutI	CAGTG	6 cut(s)	909, 913, 952, 1371, 1574, 1757
Cac8I	GCNNGC	2 cut(s)	679, 1339
CfoI	GCGC	2 cut(s)	139, 352
Cfr13I	GGNCC	3 cut(s)	642, 1180, 1747
CseI	GACGC	2 cut(s)	271, 642
CsiI	ACCWGGT	1 cut(s)	477
Csp6I	GTAC	2 cut(s)	1071, 1814
CviAII	CATG	3 cut(s)	26, 1088, 1475
CviQI	GTAC	2 cut(s)	1071, 1814
DdeI	CTNAG	3 cut(s)	612, 1414, 1440
DpnI	GATC	4 cut(s)	222, 592, 820, 841
DpnII	GATC	4 cut(s)	220, 590, 818, 839
DrdI	GACNNNNNNGTC	2 cut(s)	281, 1001
DriI	GACNNNNNGTC	1 cut(s)	652
DseDI	GACNNNNNNGTC	2 cut(s)	281, 1001
EaeI	YGGCCR	1 cut(s)	238
EagI	CGGCCG	1 cut(s)	238
Eam1104I	CTCTTC	1 cut(s)	1195
Eam1105I	GACNNNNNGTC	1 cut(s)	652
EarI	CTCTTC	1 cut(s)	1195
EciI	GGCGGA	1 cut(s)	197
Ecl136II	GAGCTC	2 cut(s)	797, 1188
EclXI	CGGCCG	1 cut(s)	238
Eco130I	CCWWGG	1 cut(s)	586
Eco24I	GRGCYC	3 cut(s)	248, 799, 1190
Eco31I	GGTCTC	3 cut(s)	100, 468, 487
Eco47I	GGWCC	1 cut(s)	1180
Eco47III	AGCGCT	1 cut(s)	351
Eco52I	CGGCCG	1 cut(s)	238
Eco53kI	GAGCTC	2 cut(s)	797, 1188
Eco57I	CTGAAG	2 cut(s)	885, 918
Eco81I	CCTNAGG	2 cut(s)	612, 1440
Eco88I	CYCGRG	1 cut(s)	103
EcoICRI	GAGCTC	2 cut(s)	797, 1188
EcoNI	CCTNNNNNAGG	1 cut(s)	736
EcoRII	CCWGG	4 cut(s)	300, 477, 1141, 1816
EcoT14I	CCWWGG	1 cut(s)	586
EcoT38I	GRGCYC	3 cut(s)	248, 799, 1190
ErhI	CCWWGG	1 cut(s)	586
FaeI	CATG	3 cut(s)	29, 1091, 1478
FaqI	GGGAC	3 cut(s)	149, 1060, 1809
FatI	CATG	3 cut(s)	25, 1087, 1474
FauI	CCCGC	1 cut(s)	257
FblI	GTMKAC	2 cut(s)	292, 1135
Fnu4HI	GCNGC	8 cut(s)	95, 135, 253, 256, 280, 911, 957, 1120
FokI	GGATG	5 cut(s)	191, 630, 1218, 1413, 1479
FriOI	GRGCYC	3 cut(s)	248, 799, 1190
Fsp4HI	GCNGC	8 cut(s)	95, 135, 253, 256, 280, 911, 957, 1120
FspBI	CTAG	4 cut(s)	39, 639, 953, 1314
GlaI	GCGC	2 cut(s)	138, 351
GluI	GCNGC	8 cut(s)	95, 135, 253, 256, 280, 911, 957, 1120
HaeII	RGCGCY	2 cut(s)	140, 353
HaeIII	GGCC	5 cut(s)	226, 240, 644, 1445, 1748
HapII	CCGG	6 cut(s)	194, 218, 241, 521, 822, 1656
HgaI	GACGC	2 cut(s)	271, 642
HhaI	GCGC	2 cut(s)	139, 352
Hin1I	GRCGYC	1 cut(s)	162
Hin1II	CATG	3 cut(s)	29, 1091, 1478
Hin6I	GCGC	2 cut(s)	137, 350
HinP1I	GCGC	2 cut(s)	137, 350
HincII	GTYRAC	3 cut(s)	293, 897, 1299
HindII	GTYRAC	3 cut(s)	293, 897, 1299
HpaII	CCGG	6 cut(s)	194, 218, 241, 521, 822, 1656
HphI	GGTGA	3 cut(s)	461, 986, 1469
Hpy166II	GTNNAC	5 cut(s)	293, 897, 1136, 1272, 1299
Hpy188III	TCNNGA	7 cut(s)	158, 286, 688, 822, 1625, 1673, 1857
Hpy8I	GTNNAC	5 cut(s)	293, 897, 1136, 1272, 1299
Hpy99I	CGWCG	5 cut(s)	133, 164, 287, 650, 658
HpyAV	CCTTC	1 cut(s)	1023
HpyCH4III	ACNGT	6 cut(s)	650, 917, 947, 1333, 1503, 1569
HpyCH4IV	ACGT	4 cut(s)	162, 173, 745, 1268
HpyF10VI	GCNNNNNNNGC	4 cut(s)	252, 641, 650, 1485
HpyF3I	CTNAG	3 cut(s)	612, 1414, 1440
HpySE526I	ACGT	4 cut(s)	162, 173, 745, 1268
Hsp92I	GRCGYC	1 cut(s)	162
Hsp92II	CATG	3 cut(s)	29, 1091, 1478
HspAI	GCGC	2 cut(s)	137, 350
Kpn2I	TCCGGA	1 cut(s)	821
Kzo9I	GATC	4 cut(s)	220, 590, 818, 839
LguI	GCTCTTC	1 cut(s)	1195
LmnI	GCTCC	5 cut(s)	77, 243, 347, 802, 1627
Lsp1109I	GCAGC	4 cut(s)	242, 922, 943, 1131
LweI	GCATC	4 cut(s)	163, 897, 1435, 1901
MabI	ACCWGGT	1 cut(s)	477
MaeI	CTAG	4 cut(s)	39, 639, 953, 1314
MaeII	ACGT	4 cut(s)	162, 173, 745, 1268
MaeIII	GTNAC	4 cut(s)	947, 1277, 1327, 1579
MalI	GATC	4 cut(s)	222, 592, 820, 841
MboI	GATC	4 cut(s)	220, 590, 818, 839
MboII	GAAGA	7 cut(s)	168, 651, 924, 1073, 1182, 1220, 1472
MflI	RGATCY	2 cut(s)	590, 818
MhlI	GDGCHC	4 cut(s)	248, 799, 1190, 1624
MlyI	GAGTC	5 cut(s)	23, 66, 298, 385, 1670
MmeI	TCCRAC	2 cut(s)	359, 1340
MroI	TCCGGA	1 cut(s)	821
MroXI	GAANNNNTTC	1 cut(s)	1825
MseI	TTAA	3 cut(s)	45, 372, 1104
MspA1I	CMGCKG	1 cut(s)	255
MspI	CCGG	6 cut(s)	194, 218, 241, 521, 822, 1656
MspR9I	CCNGG	5 cut(s)	218, 302, 479, 1143, 1818
Mva1269I	GAATGC	1 cut(s)	1579
MvaI	CCWGG	4 cut(s)	302, 479, 1143, 1818
MvnI	CGCG	2 cut(s)	97, 282
MwoI	GCNNNNNNNGC	4 cut(s)	252, 641, 650, 1485
NciI	CCSGG	1 cut(s)	218
NdeII	GATC	4 cut(s)	220, 590, 818, 839
NlaIII	CATG	3 cut(s)	29, 1091, 1478
NlaIV	GGNNCC	1 cut(s)	245
NmeAIII	GCCGAG	1 cut(s)	93
NmuCI	GTSAC	2 cut(s)	947, 1277
PciSI	GCTCTTC	1 cut(s)	1195
PcsI	WCGNNNNNNNCGW	3 cut(s)	179, 270, 709
PctI	GAATGC	1 cut(s)	1579
PdmI	GAANNNNTTC	1 cut(s)	1825
PflFI	GACNNNGTC	1 cut(s)	479
PflMI	CCANNNNNTGG	1 cut(s)	1596
PkrI	GCNGC	8 cut(s)	96, 136, 254, 257, 281, 912, 958, 1121
PleI	GAGTC	5 cut(s)	23, 65, 297, 384, 1670
PpsI	GAGTC	5 cut(s)	23, 65, 297, 384, 1670
Psp124BI	GAGCTC	2 cut(s)	799, 1190
Psp1406I	AACGTT	1 cut(s)	1268
Psp6I	CCWGG	4 cut(s)	300, 477, 1141, 1816
PspGI	CCWGG	4 cut(s)	300, 477, 1141, 1816
PspN4I	GGNNCC	1 cut(s)	245
PspPI	GGNCC	3 cut(s)	642, 1180, 1747
PsuI	RGATCY	2 cut(s)	590, 818
PsyI	GACNNNGTC	1 cut(s)	479
RsaI	GTAC	2 cut(s)	1072, 1815
RsaNI	GTAC	2 cut(s)	1071, 1814
SacI	GAGCTC	2 cut(s)	799, 1190
SalI	GTCGAC	1 cut(s)	291
SapI	GCTCTTC	1 cut(s)	1195
SaqAI	TTAA	3 cut(s)	45, 372, 1104
SatI	GCNGC	8 cut(s)	95, 135, 253, 256, 280, 911, 957, 1120
Sau3AI	GATC	4 cut(s)	220, 590, 818, 839
Sau96I	GGNCC	3 cut(s)	642, 1180, 1747
SchI	GAGTC	5 cut(s)	23, 66, 298, 385, 1670
ScrFI	CCNGG	5 cut(s)	218, 302, 479, 1143, 1818
SduI	GDGCHC	4 cut(s)	248, 799, 1190, 1624
SexAI	ACCWGGT	1 cut(s)	477
SfaNI	GCATC	4 cut(s)	163, 897, 1435, 1901
SinI	GGWCC	1 cut(s)	1180
SmlI	CTYRAG	1 cut(s)	688
SmoI	CTYRAG	1 cut(s)	688
SspI	AATATT	2 cut(s)	1257, 1528
SspMI	CTAG	4 cut(s)	39, 639, 953, 1314
SstI	GAGCTC	2 cut(s)	799, 1190
StyD4I	CCNGG	5 cut(s)	216, 300, 477, 1141, 1816
StyI	CCWWGG	1 cut(s)	586
TaaI	ACNGT	6 cut(s)	650, 917, 947, 1333, 1503, 1569
TaiI	ACGT	4 cut(s)	165, 176, 748, 1271
TaqI	TCGA	5 cut(s)	144, 159, 292, 359, 793
TaqII	GACCGA	2 cut(s)	200, 1745
TauI	GCSGC	4 cut(s)	97, 137, 255, 282
Tru1I	TTAA	3 cut(s)	45, 372, 1104
Tru9I	TTAA	3 cut(s)	45, 372, 1104
TscAI	CASTG	6 cut(s)	909, 920, 952, 1378, 1574, 1757
TseFI	GTSAC	2 cut(s)	947, 1277
TseI	GCWGC	4 cut(s)	255, 910, 956, 1119
Tsp45I	GTSAC	2 cut(s)	947, 1277
TspDTI	ATGAA	8 cut(s)	17, 193, 533, 1014, 1041, 1220, 1623, 1818
TspGWI	ACGGA	1 cut(s)	1088
TspRI	CASTG	6 cut(s)	909, 920, 952, 1378, 1574, 1757
Tth111I	GACNNNGTC	1 cut(s)	479
Van91I	CCANNNNNTGG	1 cut(s)	1596
VpaK11BI	GGWCC	1 cut(s)	1180
XagI	CCTNNNNNAGG	1 cut(s)	736
XapI	RAATTY	4 cut(s)	705, 1039, 1403, 1552
XmiI	GTMKAC	2 cut(s)	292, 1135
XmnI	GAANNNNTTC	1 cut(s)	1825
XspI	CTAG	4 cut(s)	39, 639, 953, 1314
ZraI	GACGTC	1 cut(s)	163

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.