Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0001465

Physical Location & Seq

Genomic Coordinates Forward (+)

60726046 .. 60742720

Gene Structure 16675 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0489300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

ATGAAGCCCATACATGATCACAGTCATAACAACAATGGAAGCCATATTAACAATAACAACAACTGGTTGGGGTTTTCACTCTCAGCTCCCCACATGAAAATGGAGGTCACTTCTTCTTCTGACCCTCATCAACACTACAGTCATCAACAAGCTCAGGCCTCCTCTGCTTCAGCTCAGCTTCCAAGTAGCTTCTACAATCTGACCCCACTCTGCTATGAAAATGGTGGGTTTCACTCTCCCTTGACTGTAATGCCACTCAAGTCAGATGGGTCTCTTTGCATCATGGAAGCTCTCACTCGCTCACAAGCTGAAGGAATGGTGCCGAACTCGTCCCCAAAACTTGAGGACTTTCTAGGAGGAGCAAGCATGGGAGCTCATGACTATGGAACCCATCAAAGAGAGGTGGCAATGGCTCTCAGCTTAGACAGCTTGTATTACAATGAAAATGCAGAGGCAGAGCAACAATACTACTCTGGAATCCCTTTCCCTGGAGCTTACCAAACTCAAATGGAGGAAGAGTCCTCTAAGCAAGCCCACATTGTGGGCTGTGATAGTCACCAAATGACCCAGAACTGGGTGACTAGGCAGTACTCTGCTGCTCATCATGCTTTCAATCAACAACACATGAGTAACAACAGCTTGGACAATGGAGGAGTTTCTGGGTCTGTTAATGGTGGAATGCAGTGTGGGGATTTACAGTCTCTTACTTTGTCCATGAGCCCTGGATCTCAGTCCAGCTGTGTCACAGCTCCAAGGCAGATCTCACCCACTGAAACAGAGAGTCTAGCCATGGAAACCAAGAAGAGAGGTTCTGGTAAAATTAGTCAAACAAAGCAGCCAGTGCACAGAAAGTCCATTGACACATTTGGGCAGAGAACTTCACAGTATAGAGGAGTCACAAGGCATAGATGGACCGGTAGATATGAAGCTCATCTATGGGACAACAGTTGCAAGAAGGAGGGGCAAACCAGAAAAGGAAGGCAAGTTTATCTTGGGGGATATGATATGGAAGAGAAAGCTGCAAGGGCATATGATCTTGCTGCTCTTAAGTACTGGGGCTCTTCAACCCACATAAACTTCCCATTGGATGATTACACAACACAAATTGAAGAAATGAAGAATATGAACCGGCAAGAGTATGTTGCGCATCTGAGGAGGAAAAGCAGTGGATTTTCAAGGGGAGCTTCAATTTACCGAGGAGTTACAAGACATCACCAGCATGGGAGGTGGCAAGCTCGAATTGGCAGGGTTGCAGGAAACAAGGACCTTTATCTTGGTACATTTGGCACCCAAGAGGAAGCAGCCGAAGCTTATGACATAGCTGCAATCAAGTTCCGTGGGGTAAATGCGGTCACCAACTTTGACATTACCAGATATGATGTTGAGAAAATCATGGCCAGCAATACTTTGCTTGCTGGAGAATTCGCTAGGCGTAACAAGGAGGTTGAACCTAACAAACAAGTCATTGAGTACAACTCACCAGCACAGAACAATGTGGAAGCCAATACACCCGAAAATAGTCATGGGAATAGTTCAGATTGGAAAATGGCTTTGTACCAAGCTGCACAGCAACAACAAGCAACTGCTGCTACTTGTGTTCAAACACTTGATCAAAAATCAATGTCTTCAGGGAATTACAGAAGTCCTGCATCTTTCTCAATGGCATTGCAAGACCTCATTCGCGTTGAATCAGTGAACTCTAGCCAGCAGTTGATGGATGAATCAGCTAAAGCCGGTGCTCATTTTTCAAATCCTTCGTCGCTGGTGACCAGTCTGAGCAGCTCCAGAGAAGATAGCCCTGACAAATCAGGCCCCACAATGCTGTTTGCAAAACCTCCAATGGCATCAAAGTTCATAAGTCCAAGTACTGCTGCTGCTGTTAGCTCTTGGTTCCCATCAGCTCAGTTGAGGCCTGCAGCTGCCATTTCCATGTCTCACTTGCCTCTATTTGCTGCTTGGAATGACACCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAP

Protein Analysis

656

Amino Acids

72.38

Weight (kDa)

6.98

Isoelectric Point (pI)

52.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	295 - 353	7e-12	AP2 domain
AP2	PF00847	398 - 447	8.5e-10	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001465)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g32980 FvH4_2g32990 FvH4_2g33010 FvH4_2g33010 FvH4_3g06070 FvH4_3g06070 FvH4_3g08121 FvH4_4g31040 FvH4_5g10050 FvH4_5g10050 FvH4_5g10060 FvH4_7g30720
rosa_chinensis	RchiOBHm_Chr5g0010081 RchiOBHm_Chr5g0010091 RchiOBHm_Chr5g0084011
rosa_laevigata	RLG00000004717 RLG00000010542 RLG00000011121 RLG00000026384 RLG00000026388 RLG00000031724
rosa_multiflora	Rmu_sc0000898.1_g000020 Rmu_sc0001192.1_g000048 Rmu_sc0003764.1_g000005 Rmu_ssc0000114.1_g000036
rosa_roxburghii	Rroxscaffold_3G00249040 Rroxscaffold_3G00266610 Rroxscaffold_4G00280020
rosa_rugosa	Rorug02G0380100 Rorug04G0449100 Rorug04G0449100 Rorug06G0489300
rosa_samantha	Rh1AG436800 Rh1CG406400 Rh2AG329500 Rh4AG189100 Rh4BG345900 Rh5AG280500 Rh5AG529400 Rh5CG087600 Rh5DG185000 Rh5DG374500 Rh6BG152500 Rh6BG169300 Rh6CG501800 Rh6DG136700 Rh6DG225600 Rh6DG488100 Rh7CG095300 Rh7DG400300
rosa_wichuraiana	Rw2G017690 Rw4G016130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1146
AccB1I	GGYRCC	2 cut(s)	319, 1286
AccB7I	CCANNNNNTGG	1 cut(s)	541
AccII	CGCG	1 cut(s)	1683
AciI	CCGC	1 cut(s)	1349
AclWI	GGATC	1 cut(s)	733
AcoI	YGGCCR	1 cut(s)	1395
AcsI	RAATTY	1 cut(s)	1421
AcuI	CTGAAG	3 cut(s)	153, 330, 1611
AdeI	CACNNNGTG	1 cut(s)	541
AfaI	GTAC	6 cut(s)	590, 1052, 1279, 1472, 1556, 1867
AfiI	CCNNNNNNNGG	4 cut(s)	488, 541, 573, 574
AflII	CTTAAG	1 cut(s)	1046
AgeI	ACCGGT	1 cut(s)	914
AgsI	TTSAA	9 cut(s)	613, 1065, 1109, 1176, 1188, 1448, 1601, 1688, 1749
AjnI	CCWGG	2 cut(s)	487, 721
Alw21I	GWGCWC	3 cut(s)	376, 846, 1741
Alw26I	GTCTC	3 cut(s)	276, 705, 1938
Alw44I	GTGCAC	1 cut(s)	842
AlwI	GGATC	1 cut(s)	733
AoxI	GGCC	4 cut(s)	156, 1395, 1810, 1910
ApaLI	GTGCAC	1 cut(s)	842
ApoI	RAATTY	1 cut(s)	1421
ArsI	GACNNNNNNTTYG	2 cut(s)	1742, 1774
AsiGI	ACCGGT	1 cut(s)	914
AspLEI	GCGC	1 cut(s)	1147
AspS9I	GGNCC	3 cut(s)	912, 1264, 1811
AsuHPI	GGTGA	7 cut(s)	548, 589, 756, 1205, 1345, 1470, 1777
AvaII	GGWCC	2 cut(s)	912, 1264
BaeGI	GKGCMC	1 cut(s)	846
BalI	TGGCCA	1 cut(s)	1397
BanI	GGYRCC	2 cut(s)	319, 1286
BanII	GRGCYC	3 cut(s)	376, 722, 1061
BbsI	GAAGAC	1 cut(s)	1617
Bbv12I	GWGCWC	3 cut(s)	376, 846, 1741
BccI	CCATC	5 cut(s)	260, 399, 903, 1708, 1903
BciT130I	CCWGG	2 cut(s)	489, 723
BclI	TGATCA	2 cut(s)	16, 1609
BcoDI	GTCTC	3 cut(s)	276, 705, 1938
BfaI	CTAG	6 cut(s)	353, 582, 785, 1428, 1701, 1969
BfmI	CTRYAG	2 cut(s)	136, 1914
BfrI	CTTAAG	1 cut(s)	1046
BglII	AGATCT	1 cut(s)	759
BlpI	GCTNAGC	1 cut(s)	174
BmcAI	AGTACT	3 cut(s)	590, 1052, 1867
Bme1390I	CCNGG	2 cut(s)	489, 723
Bme18I	GGWCC	2 cut(s)	912, 1264
BmgT120I	GGNCC	3 cut(s)	912, 1264, 1811
BmiI	GGNNCC	5 cut(s)	321, 388, 1288, 1813, 1892
BmrFI	CCNGG	2 cut(s)	489, 723
BmrI	ACTGGG	2 cut(s)	583, 1063
BmsI	GCATC	4 cut(s)	288, 1156, 1658, 1853
BmuI	ACTGGG	2 cut(s)	583, 1063
BpiI	GAAGAC	1 cut(s)	1617
BplI	GAGNNNNNCTC	2 cut(s)	1460, 1492
BpmI	CTGGAG	3 cut(s)	510, 1437, 1768
Bpu10I	CCTNAGC	1 cut(s)	153
Bpu1102I	GCTNAGC	1 cut(s)	174
BpuEI	CTTGAG	2 cut(s)	242, 362
BsaI	GGTCTC	1 cut(s)	276
BsaJI	CCNNGG	6 cut(s)	487, 721, 752, 789, 1195, 1336
BsaWI	WCCGGW	1 cut(s)	914
BsaXI	ACNNNNNCTCC	2 cut(s)	503, 533
Bsc4I	CCNNNNNNNGG	4 cut(s)	488, 541, 573, 574
Bse118I	RCCGGY	3 cut(s)	914, 1128, 1733
Bse1I	ACTGG	5 cut(s)	68, 578, 839, 1058, 1770
Bse3DI	GCAATG	2 cut(s)	414, 1664
BseBI	CCWGG	2 cut(s)	489, 723
BseDI	CCNNGG	6 cut(s)	487, 721, 752, 789, 1195, 1336
BseGI	GGATG	2 cut(s)	1093, 1723
BseLI	CCNNNNNNNGG	4 cut(s)	488, 541, 573, 574
BseMI	GCAATG	2 cut(s)	414, 1664
BseMII	CTCAG	8 cut(s)	96, 167, 188, 430, 743, 1142, 1766, 1916
BseNI	ACTGG	5 cut(s)	68, 578, 839, 1058, 1770
BseRI	GAGGAG	6 cut(s)	151, 372, 666, 906, 1168, 1212
BseSI	GKGCMC	1 cut(s)	846
BsgI	GTGCAG	1 cut(s)	1548
Bsh1236I	CGCG	1 cut(s)	1683
BshFI	GGCC	4 cut(s)	158, 1397, 1812, 1912
BshNI	GGYRCC	2 cut(s)	319, 1286
BshTI	ACCGGT	1 cut(s)	914
BsiHKAI	GWGCWC	3 cut(s)	376, 846, 1741
BsiSI	CCGG	3 cut(s)	915, 1129, 1734
BslFI	GGGAC	2 cut(s)	316, 953
BslI	CCNNNNNNNGG	4 cut(s)	488, 541, 573, 574
BsmAI	GTCTC	3 cut(s)	276, 705, 1938
BsmFI	GGGAC	2 cut(s)	316, 953
BsmI	GAATGC	1 cut(s)	684
BsnI	GGCC	4 cut(s)	158, 1397, 1812, 1912
Bso31I	GGTCTC	1 cut(s)	276
Bsp1286I	GDGCHC	5 cut(s)	376, 722, 846, 1061, 1741
Bsp143I	GATC	5 cut(s)	16, 725, 759, 1033, 1609
Bsp1720I	GCTNAGC	1 cut(s)	174
Bsp19I	CCATGG	1 cut(s)	789
BspACI	CCGC	1 cut(s)	1349
BspANI	GGCC	4 cut(s)	158, 1397, 1812, 1912
BspCNI	CTCAG	8 cut(s)	95, 166, 187, 429, 742, 1143, 1767, 1915
BspFNI	CGCG	1 cut(s)	1683
BspHI	TCATGA	1 cut(s)	376
BspLI	GGNNCC	5 cut(s)	321, 388, 1288, 1813, 1892
BspMAI	CTGCAG	1 cut(s)	1918
BspPI	GGATC	1 cut(s)	733
BspQI	GCTCTTC	1 cut(s)	1066
BspT107I	GGYRCC	2 cut(s)	319, 1286
BspTI	CTTAAG	1 cut(s)	1046
BspTNI	GGTCTC	1 cut(s)	276
BsrDI	GCAATG	2 cut(s)	414, 1664
BsrFI	RCCGGY	3 cut(s)	914, 1128, 1733
BsrI	ACTGG	5 cut(s)	68, 578, 839, 1058, 1770
BssAI	RCCGGY	3 cut(s)	914, 1128, 1733
BssECI	CCNNGG	6 cut(s)	487, 721, 752, 789, 1195, 1336
BssMI	GATC	5 cut(s)	16, 725, 759, 1033, 1609
BssT1I	CCWWGG	2 cut(s)	752, 789
Bst2UI	CCWGG	2 cut(s)	489, 723
Bst4CI	ACNGT	6 cut(s)	23, 140, 247, 699, 885, 947
Bst6I	CTCTTC	4 cut(s)	510, 797, 1005, 1066
BstAFI	CTTAAG	1 cut(s)	1046
BstAPI	GCANNNNNTGC	2 cut(s)	841, 1586
BstC8I	GCNNGC	7 cut(s)	364, 531, 1233, 1399, 1413, 1706, 1914
BstDSI	CCRYGG	2 cut(s)	789, 1336
BstEII	GGTNACC	2 cut(s)	1351, 1765
BstF5I	GGATG	2 cut(s)	1093, 1723
BstFNI	CGCG	1 cut(s)	1683
BstHHI	GCGC	1 cut(s)	1147
BstKTI	GATC	5 cut(s)	19, 728, 762, 1036, 1612
BstMAI	GTCTC	3 cut(s)	276, 705, 1938
BstMBI	GATC	5 cut(s)	16, 725, 759, 1033, 1609
BstMWI	GCNNNNNNNGC	7 cut(s)	164, 426, 605, 841, 1025, 1307, 1586
BstNI	CCWGG	2 cut(s)	489, 723
BstPI	GGTNACC	2 cut(s)	1351, 1765
BstSCI	CCNGG	2 cut(s)	487, 721
BstSFI	CTRYAG	2 cut(s)	136, 1914
BstSLI	GKGCMC	1 cut(s)	846
BstUI	CGCG	1 cut(s)	1683
BstV2I	GAAGAC	1 cut(s)	1617
BstX2I	RGATCY	2 cut(s)	725, 759
BstYI	RGATCY	2 cut(s)	725, 759
BsuRI	GGCC	4 cut(s)	158, 1397, 1812, 1912
BtgI	CCRYGG	2 cut(s)	789, 1336
BtsCI	GGATG	2 cut(s)	1093, 1723
BtsI	GCAGTG	2 cut(s)	689, 1171
BtsIMutI	CAGTG	5 cut(s)	689, 768, 846, 1171, 1698
Cac8I	GCNNGC	7 cut(s)	364, 531, 1233, 1399, 1413, 1706, 1914
CciI	TCATGA	1 cut(s)	376
CfoI	GCGC	1 cut(s)	1147
Cfr10I	RCCGGY	3 cut(s)	914, 1128, 1733
Cfr13I	GGNCC	3 cut(s)	912, 1264, 1811
Csp6I	GTAC	6 cut(s)	589, 1051, 1278, 1471, 1555, 1866
CspAI	ACCGGT	1 cut(s)	914
CspCI	CAANNNNNGTGG	2 cut(s)	1318, 1353
CviQI	GTAC	6 cut(s)	589, 1051, 1278, 1471, 1555, 1866
DpnI	GATC	5 cut(s)	18, 727, 761, 1035, 1611
DpnII	GATC	5 cut(s)	16, 725, 759, 1033, 1609
DraIII	CACNNNGTG	1 cut(s)	541
EaeI	YGGCCR	1 cut(s)	1395
Eam1104I	CTCTTC	4 cut(s)	510, 797, 1005, 1066
EarI	CTCTTC	4 cut(s)	510, 797, 1005, 1066
Ecl136II	GAGCTC	1 cut(s)	374
Eco130I	CCWWGG	2 cut(s)	752, 789
Eco147I	AGGCCT	2 cut(s)	158, 1912
Eco24I	GRGCYC	3 cut(s)	376, 722, 1061
Eco31I	GGTCTC	1 cut(s)	276
Eco47I	GGWCC	2 cut(s)	912, 1264
Eco53kI	GAGCTC	1 cut(s)	374
Eco57I	CTGAAG	3 cut(s)	153, 330, 1611
Eco91I	GGTNACC	2 cut(s)	1351, 1765
EcoICRI	GAGCTC	1 cut(s)	374
EcoO109I	RGGNCCY	2 cut(s)	1264, 1811
EcoO65I	GGTNACC	2 cut(s)	1351, 1765
EcoRI	GAATTC	1 cut(s)	1421
EcoRII	CCWGG	2 cut(s)	487, 721
EcoT14I	CCWWGG	2 cut(s)	752, 789
EcoT38I	GRGCYC	3 cut(s)	376, 722, 1061
ErhI	CCWWGG	2 cut(s)	752, 789
FalI	AAGNNNNNCTT	4 cut(s)	975, 1007, 1168, 1200
FaqI	GGGAC	2 cut(s)	316, 953
FauNDI	CATATG	1 cut(s)	1030
FbaI	TGATCA	2 cut(s)	16, 1609
FokI	GGATG	2 cut(s)	1100, 1730
FriOI	GRGCYC	3 cut(s)	376, 722, 1061
FspBI	CTAG	6 cut(s)	353, 582, 785, 1428, 1701, 1969
FspI	TGCGCA	1 cut(s)	1146
GlaI	GCGC	1 cut(s)	1146
GsuI	CTGGAG	3 cut(s)	510, 1437, 1768
HaeIII	GGCC	4 cut(s)	158, 1397, 1812, 1912
HapII	CCGG	3 cut(s)	915, 1129, 1734
HhaI	GCGC	1 cut(s)	1147
Hin6I	GCGC	1 cut(s)	1145
HinP1I	GCGC	1 cut(s)	1145
HindIII	AAGCTT	1 cut(s)	1308
HinfI	GANTC	6 cut(s)	477, 518, 781, 894, 1688, 1721
HpaII	CCGG	3 cut(s)	915, 1129, 1734
HphI	GGTGA	7 cut(s)	548, 589, 756, 1205, 1345, 1470, 1777
Hpy166II	GTNNAC	2 cut(s)	844, 1696
Hpy188I	TCNGA	6 cut(s)	121, 201, 265, 1152, 1537, 1776
Hpy188III	TCNNGA	3 cut(s)	377, 474, 1785
Hpy8I	GTNNAC	2 cut(s)	844, 1696
Hpy99I	CGWCG	1 cut(s)	1762
HpyAV	CCTTC	4 cut(s)	305, 949, 972, 1764
HpyCH4III	ACNGT	6 cut(s)	23, 140, 247, 699, 885, 947
HpyF10VI	GCNNNNNNNGC	7 cut(s)	164, 426, 605, 841, 1025, 1307, 1586
HspAI	GCGC	1 cut(s)	1145
Ksp22I	TGATCA	2 cut(s)	16, 1609
Kzo9I	GATC	5 cut(s)	16, 725, 759, 1033, 1609
LguI	GCTCTTC	1 cut(s)	1066
LmnI	GCTCC	7 cut(s)	91, 359, 371, 491, 754, 1181, 1787
LweI	GCATC	4 cut(s)	288, 1156, 1658, 1853
MaeI	CTAG	6 cut(s)	353, 582, 785, 1428, 1701, 1969
MalI	GATC	5 cut(s)	18, 727, 761, 1035, 1611
MboI	GATC	5 cut(s)	16, 725, 759, 1033, 1609
MflI	RGATCY	2 cut(s)	725, 759
MhlI	GDGCHC	5 cut(s)	376, 722, 846, 1061, 1741
MlsI	TGGCCA	1 cut(s)	1397
MluCI	AATT	6 cut(s)	819, 1104, 1188, 1239, 1421, 1633
MluNI	TGGCCA	1 cut(s)	1397
MlyI	GAGTC	3 cut(s)	527, 790, 903
Mox20I	TGGCCA	1 cut(s)	1397
MscI	TGGCCA	1 cut(s)	1397
MseI	TTAA	3 cut(s)	48, 669, 1047
MslI	CAYNNNNRTG	4 cut(s)	98, 381, 1218, 1928
Msp20I	TGGCCA	1 cut(s)	1397
MspA1I	CMGCKG	2 cut(s)	738, 1919
MspCI	CTTAAG	1 cut(s)	1046
MspI	CCGG	3 cut(s)	915, 1129, 1734
MspR9I	CCNGG	2 cut(s)	489, 723
Mva1269I	GAATGC	1 cut(s)	684
MvaI	CCWGG	2 cut(s)	489, 723
MvnI	CGCG	1 cut(s)	1683
MwoI	GCNNNNNNNGC	7 cut(s)	164, 426, 605, 841, 1025, 1307, 1586
NcoI	CCATGG	1 cut(s)	789
NdeI	CATATG	1 cut(s)	1030
NdeII	GATC	5 cut(s)	16, 725, 759, 1033, 1609
NlaIV	GGNNCC	5 cut(s)	321, 388, 1288, 1813, 1892
NmuCI	GTSAC	7 cut(s)	106, 554, 577, 742, 895, 1351, 1765
NsbI	TGCGCA	1 cut(s)	1146
PagI	TCATGA	1 cut(s)	376
PceI	AGGCCT	2 cut(s)	158, 1912
PciSI	GCTCTTC	1 cut(s)	1066
PctI	GAATGC	1 cut(s)	684
PfeI	GAWTC	3 cut(s)	477, 1688, 1721
PflMI	CCANNNNNTGG	1 cut(s)	541
PinAI	ACCGGT	1 cut(s)	914
PleI	GAGTC	3 cut(s)	526, 789, 902
PpsI	GAGTC	3 cut(s)	526, 789, 902
PpuMI	RGGWCCY	1 cut(s)	1264
Psp124BI	GAGCTC	1 cut(s)	376
Psp5II	RGGWCCY	1 cut(s)	1264
Psp6I	CCWGG	2 cut(s)	487, 721
PspEI	GGTNACC	2 cut(s)	1351, 1765
PspGI	CCWGG	2 cut(s)	487, 721
PspN4I	GGNNCC	5 cut(s)	321, 388, 1288, 1813, 1892
PspPI	GGNCC	3 cut(s)	912, 1264, 1811
PspPPI	RGGWCCY	1 cut(s)	1264
PstI	CTGCAG	1 cut(s)	1918
PsuI	RGATCY	2 cut(s)	725, 759
PvuII	CAGCTG	2 cut(s)	738, 1919
RsaI	GTAC	6 cut(s)	590, 1052, 1279, 1472, 1556, 1867
RsaNI	GTAC	6 cut(s)	589, 1051, 1278, 1471, 1555, 1866
RseI	CAYNNNNRTG	4 cut(s)	98, 381, 1218, 1928
SacI	GAGCTC	1 cut(s)	376
SapI	GCTCTTC	1 cut(s)	1066
SaqAI	TTAA	3 cut(s)	48, 669, 1047
Sau3AI	GATC	5 cut(s)	16, 725, 759, 1033, 1609
Sau96I	GGNCC	3 cut(s)	912, 1264, 1811
ScaI	AGTACT	3 cut(s)	590, 1052, 1867
SchI	GAGTC	3 cut(s)	527, 790, 903
ScrFI	CCNGG	2 cut(s)	489, 723
SduI	GDGCHC	5 cut(s)	376, 722, 846, 1061, 1741
SfaNI	GCATC	4 cut(s)	288, 1156, 1658, 1853
SfcI	CTRYAG	2 cut(s)	136, 1914
SinI	GGWCC	2 cut(s)	912, 1264
SmiMI	CAYNNNNRTG	4 cut(s)	98, 381, 1218, 1928
SmlI	CTYRAG	3 cut(s)	257, 341, 1046
SmoI	CTYRAG	3 cut(s)	257, 341, 1046
Sse9I	AATT	6 cut(s)	819, 1104, 1188, 1239, 1421, 1633
SseBI	AGGCCT	2 cut(s)	158, 1912
SsiI	CCGC	1 cut(s)	1349
SspMI	CTAG	6 cut(s)	353, 582, 785, 1428, 1701, 1969
SstI	GAGCTC	1 cut(s)	376
StuI	AGGCCT	2 cut(s)	158, 1912
StyD4I	CCNGG	2 cut(s)	487, 721
StyI	CCWWGG	2 cut(s)	752, 789
TaaI	ACNGT	6 cut(s)	23, 140, 247, 699, 885, 947
TaqI	TCGA	1 cut(s)	1237
TasI	AATT	6 cut(s)	819, 1104, 1188, 1239, 1421, 1633
TatI	WGTACW	4 cut(s)	588, 1050, 1470, 1865
TfiI	GAWTC	3 cut(s)	477, 1688, 1721
Tru1I	TTAA	3 cut(s)	48, 669, 1047
Tru9I	TTAA	3 cut(s)	48, 669, 1047
TscAI	CASTG	5 cut(s)	689, 775, 846, 1171, 1698
TseFI	GTSAC	7 cut(s)	106, 554, 577, 742, 895, 1351, 1765
Tsp45I	GTSAC	7 cut(s)	106, 554, 577, 742, 895, 1351, 1765
TspDTI	ATGAA	9 cut(s)	17, 110, 231, 456, 939, 1130, 1139, 1734, 1843
TspGWI	ACGGA	1 cut(s)	1325
TspRI	CASTG	5 cut(s)	689, 775, 846, 1171, 1698
Van91I	CCANNNNNTGG	1 cut(s)	541
Vha464I	CTTAAG	1 cut(s)	1046
VneI	GTGCAC	1 cut(s)	842
VpaK11BI	GGWCC	2 cut(s)	912, 1264
XapI	RAATTY	1 cut(s)	1421
XspI	CTAG	6 cut(s)	353, 582, 785, 1428, 1701, 1969
ZrmI	AGTACT	3 cut(s)	590, 1052, 1867

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.