Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g32980 FvH4_2g32990 FvH4_2g33010 FvH4_2g33010 FvH4_3g06070 FvH4_3g06070 FvH4_3g08121 FvH4_4g31040 FvH4_5g10050 FvH4_5g10050 FvH4_5g10060 FvH4_7g30720 |
| rosa_chinensis | RchiOBHm_Chr5g0010081 RchiOBHm_Chr5g0010091 RchiOBHm_Chr5g0084011 |
| rosa_laevigata | RLG00000004717 RLG00000010542 RLG00000011121 RLG00000026384 RLG00000026388 RLG00000031724 |
| rosa_multiflora | Rmu_sc0000898.1_g000020 Rmu_sc0001192.1_g000048 Rmu_sc0003764.1_g000005 Rmu_ssc0000114.1_g000036 |
| rosa_roxburghii | Rroxscaffold_3G00249040 Rroxscaffold_3G00266610 Rroxscaffold_4G00280020 |
| rosa_rugosa | Rorug02G0380100 Rorug04G0449100 Rorug04G0449100 Rorug06G0489300 |
| rosa_samantha | Rh1AG436800 Rh1CG406400 Rh2AG329500 Rh4AG189100 Rh4BG345900 Rh5AG280500 Rh5AG529400 Rh5CG087600 Rh5DG185000 Rh5DG374500 Rh6BG152500 Rh6BG169300 Rh6CG501800 Rh6DG136700 Rh6DG225600 Rh6DG488100 Rh7CG095300 Rh7DG400300 |
| rosa_wichuraiana | Rw2G017690 Rw4G016130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 4427, 4512 |
| Acc16I | TGCGCA | 2 cut(s) | 3152, 3526 |
| Acc36I | ACCTGC | 1 cut(s) | 3694 |
| AccB1I | GGYRCC | 1 cut(s) | 4558 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 871 |
| AccBSI | CCGCTC | 3 cut(s) | 3871, 4783, 5163 |
| AccI | GTMKAC | 5 cut(s) | 717, 1705, 3726, 4202, 5125 |
| AccII | CGCG | 1 cut(s) | 194 |
| AciI | CCGC | 6 cut(s) | 997, 2570, 3869, 4783, 5163, 5586 |
| AclWI | GGATC | 8 cut(s) | 1182, 2133, 2580, 2716, 3787, 4479, 4739, 5372 |
| AcoI | YGGCCR | 4 cut(s) | 3063, 3471, 5684, 5776 |
| AcuI | CTGAAG | 6 cut(s) | 770, 2399, 2991, 3135, 4172, 4838 |
| AcvI | CACGTG | 1 cut(s) | 3026 |
| AdeI | CACNNNGTG | 1 cut(s) | 88 |
| AfeI | AGCGCT | 1 cut(s) | 2792 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 239, 320, 871, 985, 1204, 4568, 4580 |
| AflII | CTTAAG | 1 cut(s) | 547 |
| AflIII | ACRYGT | 2 cut(s) | 570, 5128 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1443 |
| AjnI | CCWGG | 6 cut(s) | 84, 847, 2121, 3163, 3661, 5648 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2261, 2293, 5598, 5630 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 5185, 5217 |
| Alw21I | GWGCWC | 3 cut(s) | 160, 472, 5730 |
| AlwI | GGATC | 8 cut(s) | 1182, 2133, 2580, 2716, 3787, 4479, 4739, 5372 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1256, 4861 |
| Ama87I | CYCGRG | 4 cut(s) | 101, 153, 2604, 4385 |
| Aor51HI | AGCGCT | 1 cut(s) | 2792 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1255, 1287 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 96, 623, 641, 4460, 5337, 5694 |
| AspLEI | GCGC | 5 cut(s) | 194, 196, 2793, 3153, 3527 |
| AspS9I | GGNCC | 8 cut(s) | 45, 975, 1936, 2119, 2587, 2668, 3949, 4571 |
| AsuC2I | CCSGG | 1 cut(s) | 1940 |
| AsuII | TTCGAA | 1 cut(s) | 4831 |
| AsuNHI | GCTAGC | 1 cut(s) | 5140 |
| AvaI | CYCGRG | 4 cut(s) | 101, 153, 2604, 4385 |
| AvaII | GGWCC | 5 cut(s) | 45, 2119, 2587, 3949, 4571 |
| AxyI | CCTNAGG | 2 cut(s) | 3185, 5090 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3741, 3774 |
| BalI | TGGCCA | 3 cut(s) | 3065, 3473, 5778 |
| BanI | GGYRCC | 1 cut(s) | 4558 |
| BanII | GRGCYC | 1 cut(s) | 160 |
| BarI | GAAGNNNNNNTAC | 6 cut(s) | 721, 753, 4704, 4736, 4934, 4966 |
| BauI | CACGAG | 1 cut(s) | 1833 |
| BbrPI | CACGTG | 1 cut(s) | 3026 |
| BbsI | GAAGAC | 2 cut(s) | 60, 514 |
| Bbv12I | GWGCWC | 3 cut(s) | 160, 472, 5730 |
| BbvCI | CCTCAGC | 1 cut(s) | 5039 |
| BceAI | ACGGC | 1 cut(s) | 1448 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 870, 904, 1333, 1367, 2960, 2994 |
| BciT130I | CCWGG | 6 cut(s) | 86, 849, 2123, 3165, 3663, 5650 |
| BciVI | GTATCC | 2 cut(s) | 1574, 3742 |
| BclI | TGATCA | 2 cut(s) | 4377, 4641 |
| BcnI | CCSGG | 1 cut(s) | 1940 |
| BfmI | CTRYAG | 8 cut(s) | 928, 1733, 2164, 2214, 2652, 3213, 3342, 5631 |
| BfoI | RGCGCY | 1 cut(s) | 2794 |
| BfrI | CTTAAG | 1 cut(s) | 547 |
| BfuAI | ACCTGC | 1 cut(s) | 3694 |
| BfuI | GTATCC | 2 cut(s) | 1574, 3742 |
| BglII | AGATCT | 5 cut(s) | 1006, 2325, 3923, 4766, 5273 |
| BlpI | GCTNAGC | 1 cut(s) | 5552 |
| Bme1390I | CCNGG | 7 cut(s) | 86, 849, 1940, 2123, 3165, 3663, 5650 |
| Bme18I | GGWCC | 5 cut(s) | 45, 2119, 2587, 3949, 4571 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1443 |
| BmeT110I | CYCGRG | 4 cut(s) | 101, 153, 2604, 4385 |
| BmgT120I | GGNCC | 8 cut(s) | 45, 975, 1936, 2119, 2587, 2668, 3949, 4571 |
| BmiI | GGNNCC | 5 cut(s) | 47, 977, 2942, 3951, 4560 |
| BmrFI | CCNGG | 7 cut(s) | 86, 849, 1940, 2123, 3165, 3663, 5650 |
| BmrI | ACTGGG | 1 cut(s) | 3910 |
| BmtI | GCTAGC | 1 cut(s) | 5144 |
| BmuI | ACTGGG | 1 cut(s) | 3910 |
| BpiI | GAAGAC | 2 cut(s) | 60, 514 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 4084, 4116 |
| BpmI | CTGGAG | 6 cut(s) | 298, 715, 2217, 3037, 3186, 5166 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2787, 5039 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 5552 |
| Bpu14I | TTCGAA | 1 cut(s) | 4831 |
| BpuEI | CTTGAG | 4 cut(s) | 662, 965, 1683, 3536 |
| BpuMI | CCSGG | 1 cut(s) | 1940 |
| Bsa29I | ATCGAT | 1 cut(s) | 880 |
| BsaAI | YACGTR | 3 cut(s) | 2854, 3026, 5111 |
| BsaBI | GATNNNNATC | 2 cut(s) | 4730, 5376 |
| BsaI | GGTCTC | 3 cut(s) | 421, 691, 4104 |
| BsaJI | CCNNGG | 4 cut(s) | 1752, 1881, 4451, 4630 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 271, 301, 3010, 3040 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 239, 320, 871, 985, 1204, 4568, 4580 |
| Bse1I | ACTGG | 8 cut(s) | 171, 1261, 1947, 3020, 3291, 3297, 3726, 3905 |
| Bse21I | CCTNAGG | 2 cut(s) | 3185, 5090 |
| Bse3DI | GCAATG | 7 cut(s) | 505, 570, 1351, 2176, 3520, 4368, 4672 |
| Bse8I | GATNNNNATC | 2 cut(s) | 4730, 5376 |
| BseBI | CCWGG | 6 cut(s) | 86, 849, 2123, 3165, 3663, 5650 |
| BseCI | ATCGAT | 1 cut(s) | 880 |
| BseDI | CCNNGG | 4 cut(s) | 1752, 1881, 4451, 4630 |
| BseJI | GATNNNNATC | 2 cut(s) | 4730, 5376 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 239, 320, 871, 985, 1204, 4568, 4580 |
| BseMI | GCAATG | 7 cut(s) | 505, 570, 1351, 2176, 3520, 4368, 4672 |
| BseNI | ACTGG | 8 cut(s) | 171, 1261, 1947, 3020, 3291, 3297, 3726, 3905 |
| BsePI | GCGCGC | 1 cut(s) | 192 |
| BseRI | GAGGAG | 2 cut(s) | 3956, 5056 |
| BseYI | CCCAGC | 1 cut(s) | 3302 |
| Bsh1236I | CGCG | 1 cut(s) | 194 |
| BshNI | GGYRCC | 1 cut(s) | 4558 |
| BshVI | ATCGAT | 1 cut(s) | 880 |
| BsiHKAI | GWGCWC | 3 cut(s) | 160, 472, 5730 |
| BsiHKCI | CYCGRG | 4 cut(s) | 101, 153, 2604, 4385 |
| BsiSI | CCGG | 4 cut(s) | 1503, 1939, 2547, 5687 |
| BslFI | GGGAC | 4 cut(s) | 31, 851, 1426, 3935 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 239, 320, 871, 985, 1204, 4568, 4580 |
| BsmBI | CGTCTC | 1 cut(s) | 3450 |
| BsmFI | GGGAC | 4 cut(s) | 31, 851, 1426, 3935 |
| BsmI | GAATGC | 1 cut(s) | 3616 |
| Bso31I | GGTCTC | 3 cut(s) | 421, 691, 4104 |
| BsoBI | CYCGRG | 4 cut(s) | 101, 153, 2604, 4385 |
| Bsp119I | TTCGAA | 1 cut(s) | 4831 |
| Bsp1286I | GDGCHC | 3 cut(s) | 160, 472, 5730 |
| Bsp1407I | TGTACA | 3 cut(s) | 2106, 2950, 3757 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 5552 |
| Bsp19I | CCATGG | 2 cut(s) | 4451, 4630 |
| BspACI | CCGC | 6 cut(s) | 997, 2570, 3869, 4783, 5163, 5586 |
| BspDI | ATCGAT | 1 cut(s) | 880 |
| BspFNI | CGCG | 1 cut(s) | 194 |
| BspHI | TCATGA | 3 cut(s) | 3043, 3493, 3853 |
| BspLI | GGNNCC | 5 cut(s) | 47, 977, 2942, 3951, 4560 |
| BspMAI | CTGCAG | 3 cut(s) | 1737, 2168, 3346 |
| BspMI | ACCTGC | 1 cut(s) | 3694 |
| BspOI | GCTAGC | 1 cut(s) | 5144 |
| BspPI | GGATC | 8 cut(s) | 1182, 2133, 2580, 2716, 3787, 4479, 4739, 5372 |
| BspQI | GCTCTTC | 2 cut(s) | 742, 5153 |
| BspT104I | TTCGAA | 1 cut(s) | 4831 |
| BspT107I | GGYRCC | 1 cut(s) | 4558 |
| BspTI | CTTAAG | 1 cut(s) | 547 |
| BspTNI | GGTCTC | 3 cut(s) | 421, 691, 4104 |
| BsrBI | CCGCTC | 3 cut(s) | 3871, 4783, 5163 |
| BsrDI | GCAATG | 7 cut(s) | 505, 570, 1351, 2176, 3520, 4368, 4672 |
| BsrGI | TGTACA | 3 cut(s) | 2106, 2950, 3757 |
| BsrI | ACTGG | 8 cut(s) | 171, 1261, 1947, 3020, 3291, 3297, 3726, 3905 |
| BssECI | CCNNGG | 4 cut(s) | 1752, 1881, 4451, 4630 |
| BssHII | GCGCGC | 1 cut(s) | 192 |
| BssSI | CACGAG | 1 cut(s) | 1833 |
| BssT1I | CCWWGG | 4 cut(s) | 1752, 1881, 4451, 4630 |
| Bst2BI | CACGAG | 1 cut(s) | 1833 |
| Bst2UI | CCWGG | 6 cut(s) | 86, 849, 2123, 3165, 3663, 5650 |
| Bst6I | CTCTTC | 4 cut(s) | 742, 1054, 2172, 5153 |
| BstAFI | CTTAAG | 1 cut(s) | 547 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2829 |
| BstAUI | TGTACA | 3 cut(s) | 2106, 2950, 3757 |
| BstBAI | YACGTR | 3 cut(s) | 2854, 3026, 5111 |
| BstBI | TTCGAA | 1 cut(s) | 4831 |
| BstDSI | CCRYGG | 2 cut(s) | 4451, 4630 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 4566 |
| BstFNI | CGCG | 1 cut(s) | 194 |
| BstH2I | RGCGCY | 1 cut(s) | 2794 |
| BstHHI | GCGC | 5 cut(s) | 194, 196, 2793, 3153, 3527 |
| BstNI | CCWGG | 6 cut(s) | 86, 849, 2123, 3165, 3663, 5650 |
| BstNSI | RCATGY | 8 cut(s) | 129, 574, 820, 1361, 2827, 3452, 5132, 5560 |
| BstSCI | CCNGG | 7 cut(s) | 84, 847, 1938, 2121, 3163, 3661, 5648 |
| BstSFI | CTRYAG | 8 cut(s) | 928, 1733, 2164, 2214, 2652, 3213, 3342, 5631 |
| BstUI | CGCG | 1 cut(s) | 194 |
| BstV2I | GAAGAC | 2 cut(s) | 60, 514 |
| BstX2I | RGATCY | 9 cut(s) | 1006, 1174, 2125, 2325, 3923, 4471, 4731, 4766, 5273 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 972 |
| BstYI | RGATCY | 9 cut(s) | 1006, 1174, 2125, 2325, 3923, 4471, 4731, 4766, 5273 |
| Bsu15I | ATCGAT | 1 cut(s) | 880 |
| Bsu36I | CCTNAGG | 2 cut(s) | 3185, 5090 |
| BsuI | GTATCC | 2 cut(s) | 1574, 3742 |
| BsuTUI | ATCGAT | 1 cut(s) | 880 |
| BtgI | CCRYGG | 2 cut(s) | 4451, 4630 |
| BtgZI | GCGATG | 2 cut(s) | 1908, 4388 |
| BtsI | GCAGTG | 1 cut(s) | 5666 |
| BveI | ACCTGC | 1 cut(s) | 3694 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1256, 4861 |
| CciI | TCATGA | 3 cut(s) | 3043, 3493, 3853 |
| CfoI | GCGC | 5 cut(s) | 194, 196, 2793, 3153, 3527 |
| Cfr13I | GGNCC | 8 cut(s) | 45, 975, 1936, 2119, 2587, 2668, 3949, 4571 |
| ClaI | ATCGAT | 1 cut(s) | 880 |
| CsiI | ACCWGGT | 1 cut(s) | 84 |
| DraI | TTTAAA | 3 cut(s) | 2155, 5398, 5407 |
| DraIII | CACNNNGTG | 1 cut(s) | 88 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1443 |
| EaeI | YGGCCR | 4 cut(s) | 3063, 3471, 5684, 5776 |
| Eam1104I | CTCTTC | 4 cut(s) | 742, 1054, 2172, 5153 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1443 |
| EarI | CTCTTC | 4 cut(s) | 742, 1054, 2172, 5153 |
| Ecl136II | GAGCTC | 1 cut(s) | 158 |
| Eco130I | CCWWGG | 4 cut(s) | 1752, 1881, 4451, 4630 |
| Eco147I | AGGCCT | 2 cut(s) | 3219, 3679 |
| Eco24I | GRGCYC | 1 cut(s) | 160 |
| Eco31I | GGTCTC | 3 cut(s) | 421, 691, 4104 |
| Eco32I | GATATC | 1 cut(s) | 862 |
| Eco47I | GGWCC | 5 cut(s) | 45, 2119, 2587, 3949, 4571 |
| Eco47III | AGCGCT | 1 cut(s) | 2792 |
| Eco53kI | GAGCTC | 1 cut(s) | 158 |
| Eco57I | CTGAAG | 6 cut(s) | 770, 2399, 2991, 3135, 4172, 4838 |
| Eco72I | CACGTG | 1 cut(s) | 3026 |
| Eco81I | CCTNAGG | 2 cut(s) | 3185, 5090 |
| Eco88I | CYCGRG | 4 cut(s) | 101, 153, 2604, 4385 |
| EcoICRI | GAGCTC | 1 cut(s) | 158 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 4566 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2668, 4571 |
| EcoRI | GAATTC | 3 cut(s) | 1075, 2747, 3736 |
| EcoRII | CCWGG | 6 cut(s) | 84, 847, 2121, 3163, 3661, 5648 |
| EcoRV | GATATC | 1 cut(s) | 862 |
| EcoT14I | CCWWGG | 4 cut(s) | 1752, 1881, 4451, 4630 |
| EcoT22I | ATGCAT | 2 cut(s) | 4370, 5258 |
| EcoT38I | GRGCYC | 1 cut(s) | 160 |
| ErhI | CCWWGG | 4 cut(s) | 1752, 1881, 4451, 4630 |
| Esp3I | CGTCTC | 1 cut(s) | 3450 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1483, 1515, 1857, 1889 |
| FaqI | GGGAC | 4 cut(s) | 31, 851, 1426, 3935 |
| FauNDI | CATATG | 4 cut(s) | 59, 1311, 3147, 5252 |
| FbaI | TGATCA | 2 cut(s) | 4377, 4641 |
| FblI | GTMKAC | 5 cut(s) | 717, 1705, 3726, 4202, 5125 |
| FriOI | GRGCYC | 1 cut(s) | 160 |
| FspAI | RTGCGCAY | 1 cut(s) | 3152 |
| FspI | TGCGCA | 2 cut(s) | 3152, 3526 |
| GlaI | GCGC | 5 cut(s) | 193, 195, 2792, 3152, 3526 |
| GsaI | CCCAGC | 1 cut(s) | 3306 |
| GsuI | CTGGAG | 6 cut(s) | 298, 715, 2217, 3037, 3186, 5166 |
| HaeII | RGCGCY | 1 cut(s) | 2794 |
| HapII | CCGG | 4 cut(s) | 1503, 1939, 2547, 5687 |
| HhaI | GCGC | 5 cut(s) | 194, 196, 2793, 3153, 3527 |
| Hin6I | GCGC | 5 cut(s) | 192, 194, 2791, 3151, 3525 |
| HinP1I | GCGC | 5 cut(s) | 192, 194, 2791, 3151, 3525 |
| HincII | GTYRAC | 5 cut(s) | 490, 1706, 1812, 2346, 4203 |
| HindII | GTYRAC | 5 cut(s) | 490, 1706, 1812, 2346, 4203 |
| HindIII | AAGCTT | 5 cut(s) | 19, 680, 1820, 4037, 4421 |
| HpaII | CCGG | 4 cut(s) | 1503, 1939, 2547, 5687 |
| Hpy99I | CGWCG | 1 cut(s) | 2064 |
| HpyCH4IV | ACGT | 4 cut(s) | 2853, 3025, 5110, 5608 |
| HpySE526I | ACGT | 4 cut(s) | 2853, 3025, 5110, 5608 |
| HspAI | GCGC | 5 cut(s) | 192, 194, 2791, 3151, 3525 |
| Ksp22I | TGATCA | 2 cut(s) | 4377, 4641 |
| LguI | GCTCTTC | 2 cut(s) | 742, 5153 |
| LmnI | GCTCC | 4 cut(s) | 2479, 5147, 5598, 5725 |
| MabI | ACCWGGT | 1 cut(s) | 84 |
| MaeII | ACGT | 4 cut(s) | 2853, 3025, 5110, 5608 |
| MbiI | CCGCTC | 3 cut(s) | 3871, 4783, 5163 |
| MflI | RGATCY | 9 cut(s) | 1006, 1174, 2125, 2325, 3923, 4471, 4731, 4766, 5273 |
| MhlI | GDGCHC | 3 cut(s) | 160, 472, 5730 |
| MlsI | TGGCCA | 3 cut(s) | 3065, 3473, 5778 |
| MluNI | TGGCCA | 3 cut(s) | 3065, 3473, 5778 |
| MmeI | TCCRAC | 6 cut(s) | 244, 837, 1893, 4919, 5445, 5596 |
| Mox20I | TGGCCA | 3 cut(s) | 3065, 3473, 5778 |
| Mph1103I | ATGCAT | 2 cut(s) | 4370, 5258 |
| MroXI | GAANNNNTTC | 6 cut(s) | 96, 623, 641, 4460, 5337, 5694 |
| MscI | TGGCCA | 3 cut(s) | 3065, 3473, 5778 |
| Msp20I | TGGCCA | 3 cut(s) | 3065, 3473, 5778 |
| MspCI | CTTAAG | 1 cut(s) | 547 |
| MspI | CCGG | 4 cut(s) | 1503, 1939, 2547, 5687 |
| MspR9I | CCNGG | 7 cut(s) | 86, 849, 1940, 2123, 3165, 3663, 5650 |
| MssI | GTTTAAAC | 1 cut(s) | 2155 |
| Mva1269I | GAATGC | 1 cut(s) | 3616 |
| MvaI | CCWGG | 6 cut(s) | 86, 849, 2123, 3165, 3663, 5650 |
| MvnI | CGCG | 1 cut(s) | 194 |
| NciI | CCSGG | 1 cut(s) | 1940 |
| NcoI | CCATGG | 2 cut(s) | 4451, 4630 |
| NdeI | CATATG | 4 cut(s) | 59, 1311, 3147, 5252 |
| NheI | GCTAGC | 1 cut(s) | 5140 |
| NlaIV | GGNNCC | 5 cut(s) | 47, 977, 2942, 3951, 4560 |
| NmuCI | GTSAC | 7 cut(s) | 393, 406, 1043, 1435, 1759, 3812, 4478 |
| NsbI | TGCGCA | 2 cut(s) | 3152, 3526 |
| NsiI | ATGCAT | 2 cut(s) | 4370, 5258 |
| NspI | RCATGY | 8 cut(s) | 129, 574, 820, 1361, 2827, 3452, 5132, 5560 |
| NspV | TTCGAA | 1 cut(s) | 4831 |
| PaeI | GCATGC | 2 cut(s) | 1361, 5560 |
| PaeR7I | CTCGAG | 2 cut(s) | 153, 2604 |
| PagI | TCATGA | 3 cut(s) | 3043, 3493, 3853 |
| PauI | GCGCGC | 1 cut(s) | 192 |
| PceI | AGGCCT | 2 cut(s) | 3219, 3679 |
| PciI | ACATGT | 2 cut(s) | 570, 5128 |
| PciSI | GCTCTTC | 2 cut(s) | 742, 5153 |
| PctI | GAATGC | 1 cut(s) | 3616 |
| PdmI | GAANNNNTTC | 6 cut(s) | 96, 623, 641, 4460, 5337, 5694 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 871 |
| PfoI | TCCNGGA | 3 cut(s) | 2121, 3163, 5648 |
| PmaCI | CACGTG | 1 cut(s) | 3026 |
| PmeI | GTTTAAAC | 1 cut(s) | 2155 |
| PmlI | CACGTG | 1 cut(s) | 3026 |
| Ppu21I | YACGTR | 3 cut(s) | 2854, 3026, 5111 |
| PpuMI | RGGWCCY | 1 cut(s) | 4571 |
| PscI | ACATGT | 2 cut(s) | 570, 5128 |
| PsiI | TTATAA | 2 cut(s) | 4427, 4512 |
| Psp124BI | GAGCTC | 1 cut(s) | 160 |
| Psp5II | RGGWCCY | 1 cut(s) | 4571 |
| Psp6I | CCWGG | 6 cut(s) | 84, 847, 2121, 3163, 3661, 5648 |
| PspCI | CACGTG | 1 cut(s) | 3026 |
| PspFI | CCCAGC | 1 cut(s) | 3302 |
| PspGI | CCWGG | 6 cut(s) | 84, 847, 2121, 3163, 3661, 5648 |
| PspN4I | GGNNCC | 5 cut(s) | 47, 977, 2942, 3951, 4560 |
| PspPI | GGNCC | 8 cut(s) | 45, 975, 1936, 2119, 2587, 2668, 3949, 4571 |
| PspPPI | RGGWCCY | 1 cut(s) | 4571 |
| PspXI | VCTCGAGB | 1 cut(s) | 153 |
| PstI | CTGCAG | 3 cut(s) | 1737, 2168, 3346 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1256, 4861 |
| PsuI | RGATCY | 9 cut(s) | 1006, 1174, 2125, 2325, 3923, 4471, 4731, 4766, 5273 |
| PteI | GCGCGC | 1 cut(s) | 192 |
| SacI | GAGCTC | 1 cut(s) | 160 |
| SalI | GTCGAC | 2 cut(s) | 1704, 4201 |
| SapI | GCTCTTC | 2 cut(s) | 742, 5153 |
| Sau96I | GGNCC | 8 cut(s) | 45, 975, 1936, 2119, 2587, 2668, 3949, 4571 |
| ScrFI | CCNGG | 7 cut(s) | 86, 849, 1940, 2123, 3165, 3663, 5650 |
| SduI | GDGCHC | 3 cut(s) | 160, 472, 5730 |
| SexAI | ACCWGGT | 1 cut(s) | 84 |
| SfcI | CTRYAG | 8 cut(s) | 928, 1733, 2164, 2214, 2652, 3213, 3342, 5631 |
| Sfr274I | CTCGAG | 2 cut(s) | 153, 2604 |
| SfuI | TTCGAA | 1 cut(s) | 4831 |
| SinI | GGWCC | 5 cut(s) | 45, 2119, 2587, 3949, 4571 |
| SlaI | CTCGAG | 2 cut(s) | 153, 2604 |
| SmlI | CTYRAG | 7 cut(s) | 153, 547, 677, 944, 1698, 2604, 3515 |
| SmoI | CTYRAG | 7 cut(s) | 153, 547, 677, 944, 1698, 2604, 3515 |
| SphI | GCATGC | 2 cut(s) | 1361, 5560 |
| SseBI | AGGCCT | 2 cut(s) | 3219, 3679 |
| SsiI | CCGC | 6 cut(s) | 997, 2570, 3869, 4783, 5163, 5586 |
| SspI | AATATT | 4 cut(s) | 3437, 3641, 4550, 5394 |
| SstI | GAGCTC | 1 cut(s) | 160 |
| StuI | AGGCCT | 2 cut(s) | 3219, 3679 |
| StyD4I | CCNGG | 7 cut(s) | 84, 847, 1938, 2121, 3163, 3661, 5648 |
| StyI | CCWWGG | 4 cut(s) | 1752, 1881, 4451, 4630 |
| TaiI | ACGT | 4 cut(s) | 2856, 3028, 5113, 5611 |
| TaqII | GACCGA | 1 cut(s) | 3937 |
| TatI | WGTACW | 6 cut(s) | 2106, 2686, 2950, 3757, 4323, 5049 |
| TauI | GCSGC | 2 cut(s) | 4786, 5588 |
| TseFI | GTSAC | 7 cut(s) | 393, 406, 1043, 1435, 1759, 3812, 4478 |
| Tsp45I | GTSAC | 7 cut(s) | 393, 406, 1043, 1435, 1759, 3812, 4478 |
| TspGWI | ACGGA | 2 cut(s) | 2579, 4913 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 871 |
| Vha464I | CTTAAG | 1 cut(s) | 547 |
| VpaK11BI | GGWCC | 5 cut(s) | 45, 2119, 2587, 3949, 4571 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 4566 |
| XbaI | TCTAGA | 3 cut(s) | 4435, 4543, 5540 |
| XceI | RCATGY | 8 cut(s) | 129, 574, 820, 1361, 2827, 3452, 5132, 5560 |
| XhoI | CTCGAG | 2 cut(s) | 153, 2604 |
| XmiI | GTMKAC | 5 cut(s) | 717, 1705, 3726, 4202, 5125 |
| XmnI | GAANNNNTTC | 6 cut(s) | 96, 623, 641, 4460, 5337, 5694 |
| Zsp2I | ATGCAT | 2 cut(s) | 4370, 5258 |