Belongs to the nucleosome assembly protein (NAP) family
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g32980 FvH4_2g32990 FvH4_2g33010 FvH4_2g33010 FvH4_3g06070 FvH4_3g06070 FvH4_3g08121 FvH4_4g31040 FvH4_5g10050 FvH4_5g10050 FvH4_5g10060 FvH4_7g30720 |
| rosa_chinensis | RchiOBHm_Chr5g0010081 RchiOBHm_Chr5g0010091 RchiOBHm_Chr5g0084011 |
| rosa_laevigata | RLG00000004717 RLG00000010542 RLG00000011121 RLG00000026384 RLG00000026388 RLG00000031724 |
| rosa_multiflora | Rmu_sc0000898.1_g000020 Rmu_sc0001192.1_g000048 Rmu_sc0003764.1_g000005 Rmu_ssc0000114.1_g000036 |
| rosa_roxburghii | Rroxscaffold_3G00249040 Rroxscaffold_3G00266610 Rroxscaffold_4G00280020 |
| rosa_rugosa | Rorug02G0380100 Rorug04G0449100 Rorug04G0449100 Rorug06G0489300 |
| rosa_samantha | Rh1AG436800 Rh1CG406400 Rh2AG329500 Rh4AG189100 Rh4BG345900 Rh5AG280500 Rh5AG529400 Rh5CG087600 Rh5DG185000 Rh5DG374500 Rh6BG152500 Rh6BG169300 Rh6CG501800 Rh6DG136700 Rh6DG225600 Rh6DG488100 Rh7CG095300 Rh7DG400300 |
| rosa_wichuraiana | Rw2G017690 Rw4G016130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1450 |
| AccB1I | GGYRCC | 1 cut(s) | 280 |
| AccIII | TCCGGA | 1 cut(s) | 532 |
| AclWI | GGATC | 6 cut(s) | 73, 348, 586, 871, 1146, 1252 |
| AcsI | RAATTY | 2 cut(s) | 413, 488 |
| AcuI | CTGAAG | 3 cut(s) | 610, 1017, 1296 |
| AcvI | CACGTG | 1 cut(s) | 752 |
| AfaI | GTAC | 3 cut(s) | 262, 941, 1291 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 440, 762, 1241 |
| AflII | CTTAAG | 1 cut(s) | 274 |
| AjnI | CCWGG | 3 cut(s) | 140, 386, 1353 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 153, 185 |
| AluBI | AGCT | 3 cut(s) | 590, 612, 1490 |
| AluI | AGCT | 3 cut(s) | 590, 612, 1490 |
| Alw21I | GWGCWC | 1 cut(s) | 1321 |
| Alw26I | GTCTC | 4 cut(s) | 26, 81, 1232, 1436 |
| Alw44I | GTGCAC | 1 cut(s) | 1317 |
| AlwI | GGATC | 6 cut(s) | 73, 348, 586, 871, 1146, 1252 |
| Ama87I | CYCGRG | 2 cut(s) | 29, 732 |
| Aor13HI | TCCGGA | 1 cut(s) | 532 |
| AoxI | GGCC | 1 cut(s) | 310 |
| ApaLI | GTGCAC | 1 cut(s) | 1317 |
| ApoI | RAATTY | 2 cut(s) | 413, 488 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 401, 492 |
| AspLEI | GCGC | 1 cut(s) | 18 |
| AspS9I | GGNCC | 1 cut(s) | 384 |
| AvaI | CYCGRG | 2 cut(s) | 29, 732 |
| AvaII | GGWCC | 1 cut(s) | 384 |
| BaeGI | GKGCMC | 1 cut(s) | 1321 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 252, 285 |
| BanI | GGYRCC | 1 cut(s) | 280 |
| BanII | GRGCYC | 1 cut(s) | 358 |
| BbrPI | CACGTG | 1 cut(s) | 752 |
| BbsI | GAAGAC | 4 cut(s) | 1473, 1512, 1530, 1578 |
| Bbv12I | GWGCWC | 1 cut(s) | 1321 |
| BccI | CCATC | 4 cut(s) | 694, 971, 998, 1529 |
| BceAI | ACGGC | 2 cut(s) | 297, 740 |
| BciT130I | CCWGG | 3 cut(s) | 142, 388, 1355 |
| BciVI | GTATCC | 2 cut(s) | 384, 1203 |
| BcoDI | GTCTC | 4 cut(s) | 26, 81, 1232, 1436 |
| BfaI | CTAG | 1 cut(s) | 497 |
| BfoI | RGCGCY | 1 cut(s) | 19 |
| BfrI | CTTAAG | 1 cut(s) | 274 |
| BfuI | GTATCC | 2 cut(s) | 384, 1203 |
| BlpI | GCTNAGC | 1 cut(s) | 591 |
| Bme1390I | CCNGG | 3 cut(s) | 142, 388, 1355 |
| Bme18I | GGWCC | 1 cut(s) | 384 |
| BmeT110I | CYCGRG | 2 cut(s) | 29, 732 |
| BmgT120I | GGNCC | 1 cut(s) | 384 |
| BmiI | GGNNCC | 1 cut(s) | 282 |
| BmrFI | CCNGG | 3 cut(s) | 142, 388, 1355 |
| BmsI | GCATC | 8 cut(s) | 154, 199, 217, 316, 538, 908, 1193, 1324 |
| BpiI | GAAGAC | 4 cut(s) | 1473, 1512, 1530, 1578 |
| BpmI | CTGGAG | 3 cut(s) | 158, 234, 806 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 591 |
| BpuEI | CTTGAG | 2 cut(s) | 812, 1094 |
| Bsa29I | ATCGAT | 1 cut(s) | 1552 |
| BsaAI | YACGTR | 1 cut(s) | 752 |
| BsaI | GGTCTC | 1 cut(s) | 81 |
| BsaJI | CCNNGG | 3 cut(s) | 256, 1059, 1477 |
| BsaWI | WCCGGW | 1 cut(s) | 532 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 440, 762, 1241 |
| Bse1I | ACTGG | 2 cut(s) | 789, 880 |
| BseAI | TCCGGA | 1 cut(s) | 532 |
| BseBI | CCWGG | 3 cut(s) | 142, 388, 1355 |
| BseCI | ATCGAT | 1 cut(s) | 1552 |
| BseDI | CCNNGG | 3 cut(s) | 256, 1059, 1477 |
| BseGI | GGATG | 2 cut(s) | 529, 744 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 440, 762, 1241 |
| BseMII | CTCAG | 4 cut(s) | 344, 1170, 1227, 1551 |
| BseNI | ACTGG | 2 cut(s) | 789, 880 |
| BseRI | GAGGAG | 1 cut(s) | 803 |
| BseSI | GKGCMC | 1 cut(s) | 1321 |
| BsgI | GTGCAG | 1 cut(s) | 792 |
| Bsh1285I | CGRYCG | 1 cut(s) | 13 |
| BshFI | GGCC | 1 cut(s) | 312 |
| BshNI | GGYRCC | 1 cut(s) | 280 |
| BshVI | ATCGAT | 1 cut(s) | 1552 |
| BsiEI | CGRYCG | 1 cut(s) | 13 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1321 |
| BsiHKCI | CYCGRG | 2 cut(s) | 29, 732 |
| BsiSI | CCGG | 1 cut(s) | 533 |
| BslFI | GGGAC | 2 cut(s) | 526, 1189 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 440, 762, 1241 |
| BsmAI | GTCTC | 4 cut(s) | 26, 81, 1232, 1436 |
| BsmFI | GGGAC | 2 cut(s) | 526, 1189 |
| BsnI | GGCC | 1 cut(s) | 312 |
| Bso31I | GGTCTC | 1 cut(s) | 81 |
| BsoBI | CYCGRG | 2 cut(s) | 29, 732 |
| Bsp1286I | GDGCHC | 2 cut(s) | 358, 1321 |
| Bsp13I | TCCGGA | 1 cut(s) | 532 |
| Bsp143I | GATC | 9 cut(s) | 55, 78, 340, 578, 741, 876, 1151, 1244, 1549 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 591 |
| BspANI | GGCC | 1 cut(s) | 312 |
| BspCNI | CTCAG | 4 cut(s) | 343, 1171, 1228, 1552 |
| BspDI | ATCGAT | 1 cut(s) | 1552 |
| BspEI | TCCGGA | 1 cut(s) | 532 |
| BspLI | GGNNCC | 1 cut(s) | 282 |
| BspPI | GGATC | 6 cut(s) | 73, 348, 586, 871, 1146, 1252 |
| BspT107I | GGYRCC | 1 cut(s) | 280 |
| BspTI | CTTAAG | 1 cut(s) | 274 |
| BspTNI | GGTCTC | 1 cut(s) | 81 |
| BsrI | ACTGG | 2 cut(s) | 789, 880 |
| BssECI | CCNNGG | 3 cut(s) | 256, 1059, 1477 |
| BssMI | GATC | 9 cut(s) | 55, 78, 340, 578, 741, 876, 1151, 1244, 1549 |
| BssT1I | CCWWGG | 3 cut(s) | 256, 1059, 1477 |
| Bst2UI | CCWGG | 3 cut(s) | 142, 388, 1355 |
| Bst4CI | ACNGT | 4 cut(s) | 11, 673, 1289, 1294 |
| BstAFI | CTTAAG | 1 cut(s) | 274 |
| BstBAI | YACGTR | 1 cut(s) | 752 |
| BstC8I | GCNNGC | 1 cut(s) | 558 |
| BstDEI | CTNAG | 8 cut(s) | 71, 330, 561, 591, 869, 1179, 1236, 1560 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1239 |
| BstF5I | GGATG | 2 cut(s) | 529, 744 |
| BstH2I | RGCGCY | 1 cut(s) | 19 |
| BstHHI | GCGC | 1 cut(s) | 18 |
| BstKTI | GATC | 9 cut(s) | 58, 81, 343, 581, 744, 879, 1154, 1247, 1552 |
| BstMAI | GTCTC | 4 cut(s) | 26, 81, 1232, 1436 |
| BstMBI | GATC | 9 cut(s) | 55, 78, 340, 578, 741, 876, 1151, 1244, 1549 |
| BstMCI | CGRYCG | 1 cut(s) | 13 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 618 |
| BstNI | CCWGG | 3 cut(s) | 142, 388, 1355 |
| BstSCI | CCNGG | 3 cut(s) | 140, 386, 1353 |
| BstSLI | GKGCMC | 1 cut(s) | 1321 |
| BstV2I | GAAGAC | 4 cut(s) | 1473, 1512, 1530, 1578 |
| BstX2I | RGATCY | 2 cut(s) | 78, 1151 |
| BstYI | RGATCY | 2 cut(s) | 78, 1151 |
| Bsu15I | ATCGAT | 1 cut(s) | 1552 |
| BsuI | GTATCC | 2 cut(s) | 384, 1203 |
| BsuRI | GGCC | 1 cut(s) | 312 |
| BsuTUI | ATCGAT | 1 cut(s) | 1552 |
| BtsCI | GGATG | 2 cut(s) | 529, 744 |
| BtsIMutI | CAGTG | 2 cut(s) | 273, 1321 |
| Cac8I | GCNNGC | 1 cut(s) | 558 |
| CfoI | GCGC | 1 cut(s) | 18 |
| Cfr13I | GGNCC | 1 cut(s) | 384 |
| ClaI | ATCGAT | 1 cut(s) | 1552 |
| CsiI | ACCWGGT | 1 cut(s) | 1353 |
| Csp6I | GTAC | 3 cut(s) | 261, 940, 1290 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1338, 1373 |
| CviQI | GTAC | 3 cut(s) | 261, 940, 1290 |
| DdeI | CTNAG | 8 cut(s) | 71, 330, 561, 591, 869, 1179, 1236, 1560 |
| DpnI | GATC | 9 cut(s) | 57, 80, 342, 580, 743, 878, 1153, 1246, 1551 |
| DpnII | GATC | 9 cut(s) | 55, 78, 340, 578, 741, 876, 1151, 1244, 1549 |
| DraI | TTTAAA | 2 cut(s) | 306, 1087 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1450 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1450 |
| Eco130I | CCWWGG | 3 cut(s) | 256, 1059, 1477 |
| Eco24I | GRGCYC | 1 cut(s) | 358 |
| Eco31I | GGTCTC | 1 cut(s) | 81 |
| Eco32I | GATATC | 1 cut(s) | 49 |
| Eco47I | GGWCC | 1 cut(s) | 384 |
| Eco57I | CTGAAG | 3 cut(s) | 610, 1017, 1296 |
| Eco72I | CACGTG | 1 cut(s) | 752 |
| Eco88I | CYCGRG | 2 cut(s) | 29, 732 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1239 |
| EcoRI | GAATTC | 2 cut(s) | 413, 488 |
| EcoRII | CCWGG | 3 cut(s) | 140, 386, 1353 |
| EcoRV | GATATC | 1 cut(s) | 49 |
| EcoT14I | CCWWGG | 3 cut(s) | 256, 1059, 1477 |
| EcoT22I | ATGCAT | 1 cut(s) | 545 |
| EcoT38I | GRGCYC | 1 cut(s) | 358 |
| ErhI | CCWWGG | 3 cut(s) | 256, 1059, 1477 |
| FaqI | GGGAC | 2 cut(s) | 526, 1189 |
| FokI | GGATG | 2 cut(s) | 516, 731 |
| FriOI | GRGCYC | 1 cut(s) | 358 |
| FspBI | CTAG | 1 cut(s) | 497 |
| GlaI | GCGC | 1 cut(s) | 17 |
| GsuI | CTGGAG | 3 cut(s) | 158, 234, 806 |
| HaeII | RGCGCY | 1 cut(s) | 19 |
| HaeIII | GGCC | 1 cut(s) | 312 |
| HapII | CCGG | 1 cut(s) | 533 |
| HhaI | GCGC | 1 cut(s) | 18 |
| Hin6I | GCGC | 1 cut(s) | 16 |
| HinP1I | GCGC | 1 cut(s) | 16 |
| HincII | GTYRAC | 1 cut(s) | 726 |
| HindII | GTYRAC | 1 cut(s) | 726 |
| HindIII | AAGCTT | 1 cut(s) | 610 |
| HinfI | GANTC | 7 cut(s) | 34, 500, 832, 992, 1055, 1451, 1544 |
| HpaII | CCGG | 1 cut(s) | 533 |
| Hpy166II | GTNNAC | 5 cut(s) | 161, 632, 726, 1319, 1425 |
| Hpy8I | GTNNAC | 5 cut(s) | 161, 632, 726, 1319, 1425 |
| HpyAV | CCTTC | 3 cut(s) | 344, 568, 1108 |
| HpyCH4III | ACNGT | 4 cut(s) | 11, 673, 1289, 1294 |
| HpyCH4IV | ACGT | 3 cut(s) | 320, 464, 751 |
| HpyCH4V | TGCA | 6 cut(s) | 506, 543, 809, 1134, 1319, 1412 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 618 |
| HpyF3I | CTNAG | 8 cut(s) | 71, 330, 561, 591, 869, 1179, 1236, 1560 |
| HpySE526I | ACGT | 3 cut(s) | 320, 464, 751 |
| HspAI | GCGC | 1 cut(s) | 16 |
| Kpn2I | TCCGGA | 1 cut(s) | 532 |
| Kzo9I | GATC | 9 cut(s) | 55, 78, 340, 578, 741, 876, 1151, 1244, 1549 |
| LmnI | GCTCC | 1 cut(s) | 23 |
| LweI | GCATC | 8 cut(s) | 154, 199, 217, 316, 538, 908, 1193, 1324 |
| MabI | ACCWGGT | 1 cut(s) | 1353 |
| MaeI | CTAG | 1 cut(s) | 497 |
| MaeII | ACGT | 3 cut(s) | 320, 464, 751 |
| MaeIII | GTNAC | 3 cut(s) | 217, 268, 1283 |
| MalI | GATC | 9 cut(s) | 57, 80, 342, 580, 743, 878, 1153, 1246, 1551 |
| MboI | GATC | 9 cut(s) | 55, 78, 340, 578, 741, 876, 1151, 1244, 1549 |
| MfeI | CAATTG | 1 cut(s) | 903 |
| MflI | RGATCY | 2 cut(s) | 78, 1151 |
| MhlI | GDGCHC | 2 cut(s) | 358, 1321 |
| MluCI | AATT | 9 cut(s) | 286, 413, 488, 820, 903, 1383, 1493, 1582, 1588 |
| MlyI | GAGTC | 4 cut(s) | 28, 1049, 1460, 1538 |
| MmeI | TCCRAC | 1 cut(s) | 1220 |
| Mph1103I | ATGCAT | 1 cut(s) | 545 |
| MroI | TCCGGA | 1 cut(s) | 532 |
| MroXI | GAANNNNTTC | 2 cut(s) | 401, 492 |
| MseI | TTAA | 9 cut(s) | 135, 204, 275, 305, 423, 1026, 1086, 1224, 1597 |
| MslI | CAYNNNNRTG | 1 cut(s) | 474 |
| MspCI | CTTAAG | 1 cut(s) | 274 |
| MspI | CCGG | 1 cut(s) | 533 |
| MspR9I | CCNGG | 3 cut(s) | 142, 388, 1355 |
| MunI | CAATTG | 1 cut(s) | 903 |
| MvaI | CCWGG | 3 cut(s) | 142, 388, 1355 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 618 |
| NdeII | GATC | 9 cut(s) | 55, 78, 340, 578, 741, 876, 1151, 1244, 1549 |
| NlaIV | GGNNCC | 1 cut(s) | 282 |
| NmuCI | GTSAC | 2 cut(s) | 268, 1283 |
| NsiI | ATGCAT | 1 cut(s) | 545 |
| PaeR7I | CTCGAG | 2 cut(s) | 29, 732 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1253 |
| PdmI | GAANNNNTTC | 2 cut(s) | 401, 492 |
| PfeI | GAWTC | 3 cut(s) | 500, 832, 992 |
| PfoI | TCCNGGA | 1 cut(s) | 386 |
| PleI | GAGTC | 4 cut(s) | 28, 1049, 1459, 1538 |
| PmaCI | CACGTG | 1 cut(s) | 752 |
| PmlI | CACGTG | 1 cut(s) | 752 |
| PpsI | GAGTC | 4 cut(s) | 28, 1049, 1459, 1538 |
| Ppu21I | YACGTR | 1 cut(s) | 752 |
| Psp6I | CCWGG | 3 cut(s) | 140, 386, 1353 |
| PspCI | CACGTG | 1 cut(s) | 752 |
| PspGI | CCWGG | 3 cut(s) | 140, 386, 1353 |
| PspN4I | GGNNCC | 1 cut(s) | 282 |
| PspPI | GGNCC | 1 cut(s) | 384 |
| PsuI | RGATCY | 2 cut(s) | 78, 1151 |
| RsaI | GTAC | 3 cut(s) | 262, 941, 1291 |
| RsaNI | GTAC | 3 cut(s) | 261, 940, 1290 |
| RseI | CAYNNNNRTG | 1 cut(s) | 474 |
| SaqAI | TTAA | 9 cut(s) | 135, 204, 275, 305, 423, 1026, 1086, 1224, 1597 |
| Sau3AI | GATC | 9 cut(s) | 55, 78, 340, 578, 741, 876, 1151, 1244, 1549 |
| Sau96I | GGNCC | 1 cut(s) | 384 |
| SchI | GAGTC | 4 cut(s) | 28, 1049, 1460, 1538 |
| ScrFI | CCNGG | 3 cut(s) | 142, 388, 1355 |
| SduI | GDGCHC | 2 cut(s) | 358, 1321 |
| SexAI | ACCWGGT | 1 cut(s) | 1353 |
| SfaNI | GCATC | 8 cut(s) | 154, 199, 217, 316, 538, 908, 1193, 1324 |
| Sfr274I | CTCGAG | 2 cut(s) | 29, 732 |
| SinI | GGWCC | 1 cut(s) | 384 |
| SlaI | CTCGAG | 2 cut(s) | 29, 732 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 474 |
| SmlI | CTYRAG | 5 cut(s) | 29, 274, 732, 827, 1073 |
| SmoI | CTYRAG | 5 cut(s) | 29, 274, 732, 827, 1073 |
| Sse9I | AATT | 9 cut(s) | 286, 413, 488, 820, 903, 1383, 1493, 1582, 1588 |
| SspMI | CTAG | 1 cut(s) | 497 |
| StyD4I | CCNGG | 3 cut(s) | 140, 386, 1353 |
| StyI | CCWWGG | 3 cut(s) | 256, 1059, 1477 |
| TaaI | ACNGT | 4 cut(s) | 11, 673, 1289, 1294 |
| TaiI | ACGT | 3 cut(s) | 323, 467, 754 |
| TaqI | TCGA | 5 cut(s) | 30, 733, 1390, 1440, 1552 |
| TaqII | GACCGA | 1 cut(s) | 1485 |
| TasI | AATT | 9 cut(s) | 286, 413, 488, 820, 903, 1383, 1493, 1582, 1588 |
| TatI | WGTACW | 1 cut(s) | 1289 |
| TfiI | GAWTC | 3 cut(s) | 500, 832, 992 |
| Tru1I | TTAA | 9 cut(s) | 135, 204, 275, 305, 423, 1026, 1086, 1224, 1597 |
| Tru9I | TTAA | 9 cut(s) | 135, 204, 275, 305, 423, 1026, 1086, 1224, 1597 |
| TscAI | CASTG | 2 cut(s) | 273, 1321 |
| TseFI | GTSAC | 2 cut(s) | 268, 1283 |
| Tsp45I | GTSAC | 2 cut(s) | 268, 1283 |
| TspRI | CASTG | 2 cut(s) | 273, 1321 |
| Vha464I | CTTAAG | 1 cut(s) | 274 |
| VneI | GTGCAC | 1 cut(s) | 1317 |
| VpaK11BI | GGWCC | 1 cut(s) | 384 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1239 |
| XapI | RAATTY | 2 cut(s) | 413, 488 |
| XbaI | TCTAGA | 1 cut(s) | 496 |
| XhoI | CTCGAG | 2 cut(s) | 29, 732 |
| XmnI | GAANNNNTTC | 2 cut(s) | 401, 492 |
| XspI | CTAG | 1 cut(s) | 497 |
| Zsp2I | ATGCAT | 1 cut(s) | 545 |