Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0001465

Physical Location & Seq

Genomic Coordinates Forward (+)

61655637 .. 61660033

Gene Structure 4397 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004717

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2073 bp

ATGTCCTCTTTTGGCAACGTCGGGTTCTGGGGATTATTCGAAGGCCCATTTCGAGGCAGTGCGGCTCCGATTCACTGCGACTTTTGGTTGAAGCGTTCGAGGGTGTGGTCGGAGGTCAGGAGCTTTTCTCTTGTCTTCAACGATGGTGGAGGCCAGAGGGAGGCCGCCAGAACGCTGAGGTTGGGCTGCCCACCGGTTGGTCCTTCCGGCTGGATCTTTGGGGCCGAGTTGTGGGGTGGTGGATTGGCCTTGGGCCCCAGCTTCCCTGGGTTGTTGTCTGGTGGGCTGGTCCTTGTCTCCTTCTCTATCCTTTGGATTCGGCTCGGTTTGGGCCAGTTGGGGGGTGTCAAGTTTTTAAGGAGATGTGAGCAAGGGTTTGACACGCACAGATTGCCGCGCGCCTTCTCCCTCTCTCTCTCTCTCCCTCTGCGTGCAATCAGAATGAACAACGACATGAACGTGTCCGATCTCGGCTCTTGTGTTGGGAGCGGAGATGATGGACCAGCCCTTACTCCAGCCAAGCTCCACAGGTTCCCACCGGATACCCGAAAGCGCATTGAGCATCTGCTGCATCTTATACAGATACAGAAAGACCACTATGGATTAAAGGCACAGTTTTACAACGATCGAGGAGCACTTGAAGCTAAATATGAGAAACTCTATCAGCCTCTGTACGACAAGATACGATATCGTGAACGGAATTGGCCTGGAGTTACTACTGATTCTGAATCAGCAACAACAAATCAAGAGGAAAAAGGGATTCCTGATTTTTGGTACTATGCTTTGAAAGCCATTTATGTGATAAACATACGGATTAAAGAGTATGATCAAGGAGCTCTCAAACATCTTGAAAACATCAAGTGGCTTAGGACAGATAACCTTAAGGTTTTCATACTCGAGTTCTACTTTCGTCCCAACCCCTTCTTCAAAAACTCTGTTCTGACCGTGACGTATCATATGATTGATGAAGATGAATCCATTATAGAGAAAATAATAGGGACTGAAATTGAGTGGACTTCCAAAAATCACTTGAAGAAACATAGAACTGGAAATCGTAGAAGTTTCTTCGATCTTTTTAGTCCACCTGAAGTCCATAATGACTGTAAAGTAAGACAGCCTTTTTTAAAAAAACTCAAAGATATATTGCAAGGAAACTATTTAATTGGATCAATCATTCGGGATGATATAATCACTCGTGCTGTTTTATGGTTTACGGGGGAGGCTGAGCTAGAACAGTTTGAAGAGATCGCATCAAGGCATGAATGTTTCCTTAATAGCCTATCACTGGATGTCCAAAAGCGAGTTGACCTTCTTAGAAAAATTCAGAAAGATCATGATGGATTAAAGGCACAGTTTTACCGGGAAAGAGCAGAACTTGAGGCCAACTATCAGAAAGCATATAATAACATGTACAATGAGCGATTTGGGATTGTAAATGGTGTTGTTGAAGCTGAAAAATTGGTTGAAGCCCCCGAAGGTACACTCTTGACCTTTATATTATATATTTACTTTGCGACAGTACTAGTTATTAATTGTTATTATTTGGCATGTCTTGTGGCAGGGAAAGGTGTGCCTAACTTCTGGCGCCATGCTTTGGTAAACCATGAGTTGCTAGATACGGAGATTAGTATTCCTGATGGAGAAGCTCTCAAGTGTCTTACAGACATCAAGTGGTTGAGGAAAGATGACTTTAAGGGGTTCATACTTCACTTCTGCTTTGACAAAAACCATTTCTTTAAAAACTCTGTTTCGACCAAGACATATCAGTTTCTTGATGAAGATGAAACCATTTTACACAAAGCAATAGGCGGGATAGAGATAGAATGGTATCCCGGTAACTGCTTGACGAGAGAATGTGAAAGTTTCTTCAACTTTTTCAATCCCATTCAAATTGATGAAGAGGCTTCATCAACTCGCTCTAGTATGATTGAGGTCTGCTTGACCTATTGGGAGGCTGTCCAGGGAGACAAGGAGGTTGGTTTTAAAGAATCCGAAGAAAGTGATGAAGATGTAGATGAAGTCAGTGAAGATGAAGAGAGTGAAGACGAAGACGATGAAGAGGAACGTCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAP

Protein Analysis

691

Amino Acids

79.52

Weight (kDa)

5.37

Isoelectric Point (pI)

44.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAP	PF00956	190 - 407	8.7e-45	Nucleosome assembly protein (NAP)
NAP	PF00956	433 - 618	9.3e-36	Nucleosome assembly protein (NAP)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001465)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g32980 FvH4_2g32990 FvH4_2g33010 FvH4_2g33010 FvH4_3g06070 FvH4_3g06070 FvH4_3g08121 FvH4_4g31040 FvH4_5g10050 FvH4_5g10050 FvH4_5g10060 FvH4_7g30720
rosa_chinensis	RchiOBHm_Chr5g0010081 RchiOBHm_Chr5g0010091 RchiOBHm_Chr5g0084011
rosa_laevigata	RLG00000004717 RLG00000010542 RLG00000011121 RLG00000026384 RLG00000026388 RLG00000031724
rosa_multiflora	Rmu_sc0000898.1_g000020 Rmu_sc0001192.1_g000048 Rmu_sc0003764.1_g000005 Rmu_ssc0000114.1_g000036
rosa_roxburghii	Rroxscaffold_3G00249040 Rroxscaffold_3G00266610 Rroxscaffold_4G00280020
rosa_rugosa	Rorug02G0380100 Rorug04G0449100 Rorug04G0449100 Rorug06G0489300
rosa_samantha	Rh1AG436800 Rh1CG406400 Rh2AG329500 Rh4AG189100 Rh4BG345900 Rh5AG280500 Rh5AG529400 Rh5CG087600 Rh5DG185000 Rh5DG374500 Rh6BG152500 Rh6BG169300 Rh6CG501800 Rh6DG136700 Rh6DG225600 Rh6DG488100 Rh7CG095300 Rh7DG400300
rosa_wichuraiana	Rw2G017690 Rw4G016130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1584
AccB7I	CCANNNNNTGG	2 cut(s)	197, 1594
AccBSI	CCGCTC	1 cut(s)	489
AccII	CGCG	2 cut(s)	397, 399
AciI	CCGC	5 cut(s)	62, 165, 395, 489, 1809
AclWI	GGATC	2 cut(s)	221, 1174
AcsI	RAATTY	1 cut(s)	1320
AcuI	CTGAAG	1 cut(s)	1107
AcyI	GRCGYC	1 cut(s)	1585
AfaI	GTAC	5 cut(s)	674, 776, 1412, 1480, 1521
AfiI	CCNNNNNNNGG	7 cut(s)	53, 160, 197, 231, 340, 1285, 1594
AflII	CTTAAG	1 cut(s)	881
AflIII	ACRYGT	2 cut(s)	459, 1407
AgeI	ACCGGT	1 cut(s)	193
AhlI	ACTAGT	1 cut(s)	1522
AjnI	CCWGG	3 cut(s)	265, 706, 1959
AjuI	GAANNNNNNNTTGG	2 cut(s)	908, 940
AluBI	AGCT	8 cut(s)	123, 261, 523, 644, 836, 1228, 1451, 1646
AluI	AGCT	8 cut(s)	123, 261, 523, 644, 836, 1228, 1451, 1646
Alw21I	GWGCWC	2 cut(s)	637, 838
Alw26I	GTCTC	2 cut(s)	301, 1959
AlwI	GGATC	2 cut(s)	221, 1174
AlwNI	CAGNNNCTG	1 cut(s)	670
Ama87I	CYCGRG	1 cut(s)	896
AoxI	GGCC	9 cut(s)	43, 151, 162, 222, 246, 253, 331, 704, 1380
ApaI	GGGCCC	1 cut(s)	257
ApeKI	GCWGC	2 cut(s)	186, 568
ApoI	RAATTY	1 cut(s)	1320
AseI	ATTAAT	1 cut(s)	1530
AsiGI	ACCGGT	1 cut(s)	193
AspLEI	GCGC	4 cut(s)	399, 401, 555, 1587
AspS9I	GGNCC	8 cut(s)	44, 200, 222, 253, 254, 289, 331, 500
AsuC2I	CCSGG	2 cut(s)	1361, 1833
AsuII	TTCGAA	1 cut(s)	39
AvaI	CYCGRG	1 cut(s)	896
AvaII	GGWCC	3 cut(s)	200, 289, 500
BaeGI	GKGCMC	1 cut(s)	257
BanI	GGYRCC	1 cut(s)	1584
BanII	GRGCYC	2 cut(s)	257, 838
BauI	CACGAG	1 cut(s)	1194
BbsI	GAAGAC	3 cut(s)	127, 2049, 2055
Bbv12I	GWGCWC	2 cut(s)	637, 838
BbvCI	CCTCAGC	1 cut(s)	176
BbvI	GCAGC	2 cut(s)	173, 555
BccI	CCATC	4 cut(s)	137, 491, 1331, 1631
BciT130I	CCWGG	3 cut(s)	267, 708, 1961
BciVI	GTATCC	2 cut(s)	535, 1839
BclI	TGATCA	1 cut(s)	826
BcnI	CCSGG	2 cut(s)	1361, 1833
BcoDI	GTCTC	2 cut(s)	301, 1959
BcuI	ACTAGT	1 cut(s)	1522
BfaI	CTAG	4 cut(s)	1229, 1523, 1613, 1920
BfoI	RGCGCY	1 cut(s)	1588
BfrI	CTTAAG	1 cut(s)	881
BfuI	GTATCC	2 cut(s)	535, 1839
BisI	GCNGC	5 cut(s)	63, 165, 187, 395, 569
BlpI	GCTNAGC	1 cut(s)	1224
BlsI	GCNGC	5 cut(s)	64, 166, 188, 396, 570
BmcAI	AGTACT	1 cut(s)	1521
Bme1390I	CCNGG	5 cut(s)	267, 708, 1361, 1833, 1961
Bme18I	GGWCC	3 cut(s)	200, 289, 500
BmeT110I	CYCGRG	1 cut(s)	896
BmgT120I	GGNCC	8 cut(s)	44, 200, 222, 253, 254, 289, 331, 500
BmiI	GGNNCC	6 cut(s)	66, 223, 255, 256, 533, 1586
BmrFI	CCNGG	5 cut(s)	267, 708, 1361, 1833, 1961
BmsI	GCATC	3 cut(s)	571, 580, 1259
BpiI	GAAGAC	3 cut(s)	127, 2049, 2055
BplI	GAGNNNNNCTC	4 cut(s)	112, 144, 1632, 1664
BpmI	CTGGAG	2 cut(s)	498, 729
Bpu10I	CCTNAGC	2 cut(s)	176, 866
Bpu1102I	GCTNAGC	1 cut(s)	1224
Bpu14I	TTCGAA	1 cut(s)	39
BpuEI	CTTGAG	2 cut(s)	1397, 1634
BpuMI	CCSGG	2 cut(s)	1361, 1833
BsaHI	GRCGYC	1 cut(s)	1585
BsaJI	CCNNGG	4 cut(s)	249, 265, 266, 1960
BsaWI	WCCGGW	2 cut(s)	193, 538
Bsc4I	CCNNNNNNNGG	7 cut(s)	53, 160, 197, 231, 340, 1285, 1594
Bse118I	RCCGGY	1 cut(s)	193
Bse1I	ACTGG	3 cut(s)	334, 1051, 1290
BseBI	CCWGG	3 cut(s)	267, 708, 1961
BseDI	CCNNGG	4 cut(s)	249, 265, 266, 1960
BseGI	GGATG	2 cut(s)	1186, 1294
BseLI	CCNNNNNNNGG	7 cut(s)	53, 160, 197, 231, 340, 1285, 1594
BseMII	CTCAG	2 cut(s)	167, 1215
BseNI	ACTGG	3 cut(s)	334, 1051, 1290
BsePI	GCGCGC	1 cut(s)	397
BseRI	GAGGAG	1 cut(s)	645
BseSI	GKGCMC	1 cut(s)	257
BseXI	GCAGC	2 cut(s)	173, 555
BseYI	CCCAGC	1 cut(s)	257
Bsh1236I	CGCG	2 cut(s)	397, 399
Bsh1285I	CGRYCG	1 cut(s)	628
BshFI	GGCC	9 cut(s)	45, 153, 164, 224, 248, 255, 333, 706, 1382
BshNI	GGYRCC	1 cut(s)	1584
BshTI	ACCGGT	1 cut(s)	193
BsiEI	CGRYCG	1 cut(s)	628
BsiHKAI	GWGCWC	2 cut(s)	637, 838
BsiHKCI	CYCGRG	1 cut(s)	896
BsiSI	CCGG	5 cut(s)	194, 207, 539, 1360, 1833
BslFI	GGGAC	2 cut(s)	897, 1012
BslI	CCNNNNNNNGG	7 cut(s)	53, 160, 197, 231, 340, 1285, 1594
BsmAI	GTCTC	2 cut(s)	301, 1959
BsmFI	GGGAC	2 cut(s)	897, 1012
BsnI	GGCC	9 cut(s)	45, 153, 164, 224, 248, 255, 333, 706, 1382
BsoBI	CYCGRG	1 cut(s)	896
Bsp119I	TTCGAA	1 cut(s)	39
Bsp120I	GGGCCC	1 cut(s)	253
Bsp1286I	GDGCHC	3 cut(s)	257, 637, 838
Bsp1407I	TGTACA	1 cut(s)	1410
Bsp143I	GATC	8 cut(s)	213, 466, 625, 826, 1069, 1166, 1245, 1330
Bsp1720I	GCTNAGC	1 cut(s)	1224
BspACI	CCGC	5 cut(s)	62, 165, 395, 489, 1809
BspANI	GGCC	9 cut(s)	45, 153, 164, 224, 248, 255, 333, 706, 1382
BspCNI	CTCAG	2 cut(s)	168, 1216
BspFNI	CGCG	2 cut(s)	397, 399
BspHI	TCATGA	1 cut(s)	1333
BspLI	GGNNCC	6 cut(s)	66, 223, 255, 256, 533, 1586
BspPI	GGATC	2 cut(s)	221, 1174
BspT104I	TTCGAA	1 cut(s)	39
BspT107I	GGYRCC	1 cut(s)	1584
BspTI	CTTAAG	1 cut(s)	881
BsrBI	CCGCTC	1 cut(s)	489
BsrFI	RCCGGY	1 cut(s)	193
BsrGI	TGTACA	1 cut(s)	1410
BsrI	ACTGG	3 cut(s)	334, 1051, 1290
BssAI	RCCGGY	1 cut(s)	193
BssECI	CCNNGG	4 cut(s)	249, 265, 266, 1960
BssHII	GCGCGC	1 cut(s)	397
BssMI	GATC	8 cut(s)	213, 466, 625, 826, 1069, 1166, 1245, 1330
BssNI	GRCGYC	1 cut(s)	1585
BssSI	CACGAG	1 cut(s)	1194
BssT1I	CCWWGG	1 cut(s)	249
Bst2BI	CACGAG	1 cut(s)	1194
Bst2UI	CCWGG	3 cut(s)	267, 708, 1961
Bst4CI	ACNGT	6 cut(s)	615, 946, 1103, 1236, 1353, 1519
Bst6I	CTCTTC	4 cut(s)	1236, 1893, 2028, 2052
BstACI	GRCGYC	1 cut(s)	1585
BstAFI	CTTAAG	1 cut(s)	881
BstAPI	GCANNNNNTGC	2 cut(s)	391, 568
BstAUI	TGTACA	1 cut(s)	1410
BstBI	TTCGAA	1 cut(s)	39
BstC8I	GCNNGC	2 cut(s)	399, 432
BstDEI	CTNAG	4 cut(s)	176, 866, 1224, 1313
BstF5I	GGATG	2 cut(s)	1186, 1294
BstFNI	CGCG	2 cut(s)	397, 399
BstH2I	RGCGCY	1 cut(s)	1588
BstHHI	GCGC	4 cut(s)	399, 401, 555, 1587
BstKTI	GATC	8 cut(s)	216, 469, 628, 829, 1072, 1169, 1248, 1333
BstMAI	GTCTC	2 cut(s)	301, 1959
BstMBI	GATC	8 cut(s)	213, 466, 625, 826, 1069, 1166, 1245, 1330
BstMCI	CGRYCG	1 cut(s)	628
BstMWI	GCNNNNNNNGC	5 cut(s)	391, 559, 568, 641, 788
BstNI	CCWGG	3 cut(s)	267, 708, 1961
BstNSI	RCATGY	2 cut(s)	1411, 1551
BstSCI	CCNGG	5 cut(s)	265, 706, 1359, 1831, 1959
BstSLI	GKGCMC	1 cut(s)	257
BstUI	CGCG	2 cut(s)	397, 399
BstV1I	GCAGC	2 cut(s)	173, 555
BstV2I	GAAGAC	3 cut(s)	127, 2049, 2055
BstX2I	RGATCY	1 cut(s)	213
BstYI	RGATCY	1 cut(s)	213
BsuI	GTATCC	2 cut(s)	535, 1839
BsuRI	GGCC	9 cut(s)	45, 153, 164, 224, 248, 255, 333, 706, 1382
BtsCI	GGATG	2 cut(s)	1186, 1294
BtsI	GCAGTG	2 cut(s)	64, 73
BtsIMutI	CAGTG	4 cut(s)	64, 73, 1283, 2029
Cac8I	GCNNGC	2 cut(s)	399, 432
CaiI	CAGNNNCTG	1 cut(s)	670
CciI	TCATGA	1 cut(s)	1333
CfoI	GCGC	4 cut(s)	399, 401, 555, 1587
Cfr10I	RCCGGY	1 cut(s)	193
Cfr13I	GGNCC	8 cut(s)	44, 200, 222, 253, 254, 289, 331, 500
Csp6I	GTAC	5 cut(s)	673, 775, 1411, 1479, 1520
CspAI	ACCGGT	1 cut(s)	193
CspCI	CAANNNNNGTGG	2 cut(s)	127, 162
CviAII	CATG	7 cut(s)	454, 1259, 1334, 1408, 1548, 1589, 1604
CviQI	GTAC	5 cut(s)	673, 775, 1411, 1479, 1520
DdeI	CTNAG	4 cut(s)	176, 866, 1224, 1313
DinI	GGCGCC	1 cut(s)	1586
DpnI	GATC	8 cut(s)	215, 468, 627, 828, 1071, 1168, 1247, 1332
DpnII	GATC	8 cut(s)	213, 466, 625, 826, 1069, 1166, 1245, 1330
DraI	TTTAAA	3 cut(s)	1125, 1738, 1984
Eam1104I	CTCTTC	4 cut(s)	1236, 1893, 2028, 2052
EarI	CTCTTC	4 cut(s)	1236, 1893, 2028, 2052
Ecl136II	GAGCTC	1 cut(s)	836
Eco130I	CCWWGG	1 cut(s)	249
Eco24I	GRGCYC	2 cut(s)	257, 838
Eco32I	GATATC	1 cut(s)	689
Eco47I	GGWCC	3 cut(s)	200, 289, 500
Eco53kI	GAGCTC	1 cut(s)	836
Eco57I	CTGAAG	1 cut(s)	1107
Eco88I	CYCGRG	1 cut(s)	896
EcoICRI	GAGCTC	1 cut(s)	836
EcoO109I	RGGNCCY	1 cut(s)	254
EcoRII	CCWGG	3 cut(s)	265, 706, 1959
EcoRV	GATATC	1 cut(s)	689
EcoT14I	CCWWGG	1 cut(s)	249
EcoT38I	GRGCYC	2 cut(s)	257, 838
EgeI	GGCGCC	1 cut(s)	1586
EheI	GGCGCC	1 cut(s)	1586
ErhI	CCWWGG	1 cut(s)	249
FaeI	CATG	7 cut(s)	457, 1262, 1337, 1411, 1551, 1592, 1607
FalI	AAGNNNNNCTT	2 cut(s)	1102, 1134
FaqI	GGGAC	2 cut(s)	897, 1012
FatI	CATG	7 cut(s)	453, 1258, 1333, 1407, 1547, 1588, 1603
FauI	CCCGC	1 cut(s)	1802
FauNDI	CATATG	1 cut(s)	957
FbaI	TGATCA	1 cut(s)	826
Fnu4HI	GCNGC	5 cut(s)	63, 165, 187, 395, 569
FokI	GGATG	2 cut(s)	1193, 1301
FriOI	GRGCYC	2 cut(s)	257, 838
Fsp4HI	GCNGC	5 cut(s)	63, 165, 187, 395, 569
FspBI	CTAG	4 cut(s)	1229, 1523, 1613, 1920
GlaI	GCGC	4 cut(s)	398, 400, 554, 1586
GluI	GCNGC	5 cut(s)	63, 165, 187, 395, 569
GsaI	CCCAGC	1 cut(s)	261
GsuI	CTGGAG	2 cut(s)	498, 729
HaeII	RGCGCY	1 cut(s)	1588
HaeIII	GGCC	9 cut(s)	45, 153, 164, 224, 248, 255, 333, 706, 1382
HapII	CCGG	5 cut(s)	194, 207, 539, 1360, 1833
HhaI	GCGC	4 cut(s)	399, 401, 555, 1587
Hin1I	GRCGYC	1 cut(s)	1585
Hin1II	CATG	7 cut(s)	457, 1262, 1337, 1411, 1551, 1592, 1607
Hin6I	GCGC	4 cut(s)	397, 399, 553, 1585
HinP1I	GCGC	4 cut(s)	397, 399, 553, 1585
HincII	GTYRAC	1 cut(s)	1306
HindII	GTYRAC	1 cut(s)	1306
HinfI	GANTC	7 cut(s)	70, 316, 722, 728, 760, 974, 1988
HpaII	CCGG	5 cut(s)	194, 207, 539, 1360, 1833
Hpy166II	GTNNAC	7 cut(s)	695, 1014, 1082, 1212, 1306, 1481, 1600
Hpy188I	TCNGA	9 cut(s)	69, 112, 440, 466, 727, 942, 1326, 1392, 1993
Hpy8I	GTNNAC	7 cut(s)	695, 1014, 1082, 1212, 1306, 1481, 1600
Hpy99I	CGWCG	1 cut(s)	23
HpyAV	CCTTC	7 cut(s)	35, 213, 310, 412, 931, 1319, 1469
HpyCH4III	ACNGT	6 cut(s)	615, 946, 1103, 1236, 1353, 1519
HpyCH4IV	ACGT	4 cut(s)	18, 459, 950, 2065
HpyCH4V	TGCA	3 cut(s)	434, 571, 1147
HpyF10VI	GCNNNNNNNGC	5 cut(s)	391, 559, 568, 641, 788
HpyF3I	CTNAG	4 cut(s)	176, 866, 1224, 1313
HpySE526I	ACGT	4 cut(s)	18, 459, 950, 2065
Hsp92I	GRCGYC	1 cut(s)	1585
Hsp92II	CATG	7 cut(s)	457, 1262, 1337, 1411, 1551, 1592, 1607
HspAI	GCGC	4 cut(s)	397, 399, 553, 1585
KasI	GGCGCC	1 cut(s)	1584
Ksp22I	TGATCA	1 cut(s)	826
Kzo9I	GATC	8 cut(s)	213, 466, 625, 826, 1069, 1166, 1245, 1330
LmnI	GCTCC	6 cut(s)	70, 120, 486, 528, 632, 833
Lsp1109I	GCAGC	2 cut(s)	173, 555
LweI	GCATC	3 cut(s)	571, 580, 1259
MaeI	CTAG	4 cut(s)	1229, 1523, 1613, 1920
MaeII	ACGT	4 cut(s)	18, 459, 950, 2065
MaeIII	GTNAC	3 cut(s)	712, 946, 1835
MalI	GATC	8 cut(s)	215, 468, 627, 828, 1071, 1168, 1247, 1332
MbiI	CCGCTC	1 cut(s)	489
MboI	GATC	8 cut(s)	213, 466, 625, 826, 1069, 1166, 1245, 1330
MflI	RGATCY	1 cut(s)	213
MhlI	GDGCHC	3 cut(s)	257, 637, 838
MluCI	AATT	7 cut(s)	700, 1005, 1161, 1320, 1457, 1531, 1890
Mly113I	GGCGCC	1 cut(s)	1585
MmeI	TCCRAC	1 cut(s)	90
MslI	CAYNNNNRTG	2 cut(s)	458, 797
MspCI	CTTAAG	1 cut(s)	881
MspI	CCGG	5 cut(s)	194, 207, 539, 1360, 1833
MspR9I	CCNGG	5 cut(s)	267, 708, 1361, 1833, 1961
MvaI	CCWGG	3 cut(s)	267, 708, 1961
MvnI	CGCG	2 cut(s)	397, 399
MwoI	GCNNNNNNNGC	5 cut(s)	391, 559, 568, 641, 788
NarI	GGCGCC	1 cut(s)	1585
NciI	CCSGG	2 cut(s)	1361, 1833
NdeI	CATATG	1 cut(s)	957
NdeII	GATC	8 cut(s)	213, 466, 625, 826, 1069, 1166, 1245, 1330
NlaIII	CATG	7 cut(s)	457, 1262, 1337, 1411, 1551, 1592, 1607
NlaIV	GGNNCC	6 cut(s)	66, 223, 255, 256, 533, 1586
NmeAIII	GCCGAG	2 cut(s)	250, 450
NmuCI	GTSAC	1 cut(s)	946
NspI	RCATGY	2 cut(s)	1411, 1551
NspV	TTCGAA	1 cut(s)	39
PaeR7I	CTCGAG	1 cut(s)	896
PagI	TCATGA	1 cut(s)	1333
PasI	CCCWGGG	1 cut(s)	266
PauI	GCGCGC	1 cut(s)	397
PciI	ACATGT	1 cut(s)	1407
PcsI	WCGNNNNNNNCGW	1 cut(s)	456
PfeI	GAWTC	7 cut(s)	70, 316, 722, 728, 760, 974, 1988
PflMI	CCANNNNNTGG	2 cut(s)	197, 1594
PinAI	ACCGGT	1 cut(s)	193
PkrI	GCNGC	5 cut(s)	64, 166, 188, 396, 570
Ple19I	CGATCG	1 cut(s)	628
PluTI	GGCGCC	1 cut(s)	1588
PscI	ACATGT	1 cut(s)	1407
PshBI	ATTAAT	1 cut(s)	1530
Psp124BI	GAGCTC	1 cut(s)	838
Psp6I	CCWGG	3 cut(s)	265, 706, 1959
PspFI	CCCAGC	1 cut(s)	257
PspGI	CCWGG	3 cut(s)	265, 706, 1959
PspN4I	GGNNCC	6 cut(s)	66, 223, 255, 256, 533, 1586
PspOMI	GGGCCC	1 cut(s)	253
PspPI	GGNCC	8 cut(s)	44, 200, 222, 253, 254, 289, 331, 500
PspXI	VCTCGAGB	1 cut(s)	896
PstNI	CAGNNNCTG	1 cut(s)	670
PsuI	RGATCY	1 cut(s)	213
PteI	GCGCGC	1 cut(s)	397
PvuI	CGATCG	1 cut(s)	628
RsaI	GTAC	5 cut(s)	674, 776, 1412, 1480, 1521
RsaNI	GTAC	5 cut(s)	673, 775, 1411, 1479, 1520
RseI	CAYNNNNRTG	2 cut(s)	458, 797
SacI	GAGCTC	1 cut(s)	838
SatI	GCNGC	5 cut(s)	63, 165, 187, 395, 569
Sau3AI	GATC	8 cut(s)	213, 466, 625, 826, 1069, 1166, 1245, 1330
Sau96I	GGNCC	8 cut(s)	44, 200, 222, 253, 254, 289, 331, 500
ScaI	AGTACT	1 cut(s)	1521
ScrFI	CCNGG	5 cut(s)	267, 708, 1361, 1833, 1961
SduI	GDGCHC	3 cut(s)	257, 637, 838
SfaNI	GCATC	3 cut(s)	571, 580, 1259
SfoI	GGCGCC	1 cut(s)	1586
Sfr274I	CTCGAG	1 cut(s)	896
SfuI	TTCGAA	1 cut(s)	39
SinI	GGWCC	3 cut(s)	200, 289, 500
SlaI	CTCGAG	1 cut(s)	896
SmiMI	CAYNNNNRTG	2 cut(s)	458, 797
SmlI	CTYRAG	4 cut(s)	881, 896, 1376, 1649
SmoI	CTYRAG	4 cut(s)	881, 896, 1376, 1649
SpeI	ACTAGT	1 cut(s)	1522
Sse9I	AATT	7 cut(s)	700, 1005, 1161, 1320, 1457, 1531, 1890
SsiI	CCGC	5 cut(s)	62, 165, 395, 489, 1809
SspDI	GGCGCC	1 cut(s)	1584
SspMI	CTAG	4 cut(s)	1229, 1523, 1613, 1920
SstI	GAGCTC	1 cut(s)	838
StyD4I	CCNGG	5 cut(s)	265, 706, 1359, 1831, 1959
StyI	CCWWGG	1 cut(s)	249
TaaI	ACNGT	6 cut(s)	615, 946, 1103, 1236, 1353, 1519
TaiI	ACGT	4 cut(s)	21, 462, 953, 2068
TaqI	TCGA	7 cut(s)	39, 52, 98, 628, 897, 1068, 1751
TasI	AATT	7 cut(s)	700, 1005, 1161, 1320, 1457, 1531, 1890
TatI	WGTACW	2 cut(s)	1410, 1519
TauI	GCSGC	3 cut(s)	65, 167, 397
TfiI	GAWTC	7 cut(s)	70, 316, 722, 728, 760, 974, 1988
TscAI	CASTG	4 cut(s)	64, 80, 1290, 2029
TseFI	GTSAC	1 cut(s)	946
TseI	GCWGC	2 cut(s)	186, 568
Tsp45I	GTSAC	1 cut(s)	946
TspGWI	ACGGA	3 cut(s)	712, 826, 1634
TspRI	CASTG	4 cut(s)	64, 80, 1290, 2029
Van91I	CCANNNNNTGG	2 cut(s)	197, 1594
Vha464I	CTTAAG	1 cut(s)	881
VpaK11BI	GGWCC	3 cut(s)	200, 289, 500
VspI	ATTAAT	1 cut(s)	1530
XapI	RAATTY	1 cut(s)	1320
XceI	RCATGY	2 cut(s)	1411, 1551
XhoI	CTCGAG	1 cut(s)	896
XspI	CTAG	4 cut(s)	1229, 1523, 1613, 1920
ZrmI	AGTACT	1 cut(s)	1521

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.