Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0006512

Physical Location & Seq

Genomic Coordinates Reverse (-)

16099202 .. 16101383

Gene Structure 2182 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G200200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 717 bp

ATGAGTCATTATTCTGATGCACAAGATGTCGAGTTTTCAACTGCAGTTGCAGCAGCTGCATTTGCTATTCACTCCAATGAAGAAGCTAGATTACAGTATCAAAAAGGGATGAGGAAAAGCCTTCAGATCTCAAGGACGAAGACTTTGCAGGATGCCATGGCCGGGCGGCCAAGTTCTGGTGAAGTGAATAGGCGATTATCAAACAAAGAAGCAAAGAATGCTGGTGAAGCTTCAATGAGAAAGCCAGTGGGGCAGGATCAAAGAACATTGGAGAGTGCTTTTCCATCTAGGTATCCGAATCGCGCATCCTCTACAAGGCCTTCAACTCCTGCAGATGGATACCAAAACCGAAGGGGAAGTTCAACAAGACATAATACTCTGGAAACTGAAGCAGATGCTTGGGAGAAAGCTCAGATTAAGAAGATCCAGAAGCGGTATGAGAAAGTGAAATCTGCAATTCTTGCTTGGGAAAATGAGAAGAAGATGCAAGCAAAAATTAAGATGGAGAAGAGAAAGAGTGAATTGGAGCAGAGAAGAGCAAGCAACATGCAACATTACCAAATCAAGCAAACAAGAATTGACCAGATAGCAGGAGGAGCAAGGGCACAAATGGAAGAGAAAAGAAGAAATGAAGAGTCCAAGGTGAGAGAAAAGGTTAAAAGGATTAGATCAAAAGGCAAAGTTCCTGTTAAATGTTTCTGCTTCACTTGCTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Remorin_C

Protein Analysis

239

Amino Acids

27.3

Weight (kDa)

10.13

Isoelectric Point (pI)

58.59

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006512)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G61280 AT5G61280 AT5G61280
fragaria_vesca	FvH4_5g14350 FvH4_5g14350 FvH4_5g14350
malus_domestica	MD06G1199500.v1.1 MD14G1208100.v1.1
prunus_persica	Prupe.5G200200_v2.0.a1 Prupe.5G200200_v2.0.a1 Prupe.5G200200_v2.0.a1 Prupe.5G200200_v2.0.a1
pyrus_communis	pycom06g17630 pycom14g17180
rosa_chinensis	RchiOBHm_Chr7g0182351
rosa_laevigata	RLG00000005128
rosa_multiflora	Rmu_sc0000003.1_g000002
rosa_roxburghii	Rroxscaffold_3G00271280
rosa_samantha	Rh2AG395400 Rh2CG381900 Rh2DG417200 Rh4AG324600 Rh7AG050300 Rh7CG051600 Rh7DG049500
rosa_wichuraiana	Rw7G004120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	176
AccII	CGCG	1 cut(s)	303
AciI	CCGC	2 cut(s)	166, 433
AclWI	GGATC	2 cut(s)	264, 418
AcoI	YGGCCR	2 cut(s)	159, 167
AcuI	CTGAAG	2 cut(s)	107, 408
AfiI	CCNNNNNNNGG	4 cut(s)	162, 176, 315, 335
AgsI	TTSAA	4 cut(s)	39, 234, 324, 363
AluBI	AGCT	4 cut(s)	56, 86, 230, 410
AluI	AGCT	4 cut(s)	56, 86, 230, 410
AlwI	GGATC	2 cut(s)	264, 418
AlwNI	CAGNNNCTG	1 cut(s)	56
AoxI	GGCC	3 cut(s)	159, 167, 317
ApeKI	GCWGC	3 cut(s)	50, 53, 56
ArsI	GACNNNNNNTTYG	2 cut(s)	127, 159
AspLEI	GCGC	1 cut(s)	305
AsuC2I	CCSGG	1 cut(s)	163
AsuHPI	GGTGA	3 cut(s)	191, 236, 655
BaeGI	GKGCMC	1 cut(s)	607
BarI	GAAGNNNNNNTAC	2 cut(s)	75, 107
BbsI	GAAGAC	1 cut(s)	146
BbvI	GCAGC	3 cut(s)	43, 62, 65
BccI	CCATC	3 cut(s)	292, 329, 496
BcgI	CGANNNNNNTGC	2 cut(s)	127, 161
BciVI	GTATCC	2 cut(s)	303, 332
BcnI	CCSGG	1 cut(s)	163
BfaI	CTAG	2 cut(s)	87, 288
BfmI	CTRYAG	2 cut(s)	42, 330
BfuI	GTATCC	2 cut(s)	303, 332
BglI	GCCNNNNNGGC	1 cut(s)	250
BglII	AGATCT	1 cut(s)	126
BisI	GCNGC	4 cut(s)	51, 54, 57, 167
BlsI	GCNGC	4 cut(s)	52, 55, 58, 168
Bme1390I	CCNGG	1 cut(s)	163
BmrFI	CCNGG	1 cut(s)	163
BmsI	GCATC	5 cut(s)	7, 142, 314, 385, 474
BpiI	GAAGAC	1 cut(s)	146
BpuEI	CTTGAG	1 cut(s)	115
BpuMI	CCSGG	1 cut(s)	163
BsaJI	CCNNGG	2 cut(s)	156, 639
Bsc4I	CCNNNNNNNGG	4 cut(s)	162, 176, 315, 335
Bse1I	ACTGG	1 cut(s)	245
BseDI	CCNNGG	2 cut(s)	156, 639
BseGI	GGATG	3 cut(s)	114, 157, 305
BseLI	CCNNNNNNNGG	4 cut(s)	162, 176, 315, 335
BseMII	CTCAG	1 cut(s)	425
BseNI	ACTGG	1 cut(s)	245
BseRI	GAGGAG	1 cut(s)	609
BseSI	GKGCMC	1 cut(s)	607
BseXI	GCAGC	3 cut(s)	43, 62, 65
Bsh1236I	CGCG	1 cut(s)	303
BshFI	GGCC	3 cut(s)	161, 169, 319
BsiSI	CCGG	1 cut(s)	162
BslI	CCNNNNNNNGG	4 cut(s)	162, 176, 315, 335
BsmI	GAATGC	1 cut(s)	223
BsnI	GGCC	3 cut(s)	161, 169, 319
Bsp1286I	GDGCHC	1 cut(s)	607
Bsp143I	GATC	4 cut(s)	126, 256, 423, 668
Bsp19I	CCATGG	1 cut(s)	156
BspACI	CCGC	2 cut(s)	166, 433
BspANI	GGCC	3 cut(s)	161, 169, 319
BspCNI	CTCAG	1 cut(s)	424
BspFNI	CGCG	1 cut(s)	303
BspMAI	CTGCAG	2 cut(s)	46, 334
BspPI	GGATC	2 cut(s)	264, 418
BspQI	GCTCTTC	1 cut(s)	529
BsrI	ACTGG	1 cut(s)	245
BssECI	CCNNGG	2 cut(s)	156, 639
BssMI	GATC	4 cut(s)	126, 256, 423, 668
BssT1I	CCWWGG	2 cut(s)	156, 639
Bst4CI	ACNGT	1 cut(s)	96
Bst6I	CTCTTC	4 cut(s)	503, 529, 609, 627
BstAPI	GCANNNNNTGC	3 cut(s)	56, 218, 461
BstC8I	GCNNGC	2 cut(s)	489, 541
BstDEI	CTNAG	1 cut(s)	411
BstDSI	CCRYGG	1 cut(s)	156
BstENI	CCTNNNNNAGG	1 cut(s)	313
BstF5I	GGATG	3 cut(s)	114, 157, 305
BstFNI	CGCG	1 cut(s)	303
BstHHI	GCGC	1 cut(s)	305
BstKTI	GATC	4 cut(s)	129, 259, 426, 671
BstMBI	GATC	4 cut(s)	126, 256, 423, 668
BstMWI	GCNNNNNNNGC	9 cut(s)	50, 56, 62, 218, 227, 250, 461, 596, 708
BstNSI	RCATGY	1 cut(s)	550
BstSCI	CCNGG	1 cut(s)	161
BstSFI	CTRYAG	2 cut(s)	42, 330
BstSLI	GKGCMC	1 cut(s)	607
BstUI	CGCG	1 cut(s)	303
BstV1I	GCAGC	3 cut(s)	43, 62, 65
BstV2I	GAAGAC	1 cut(s)	146
BstX2I	RGATCY	2 cut(s)	126, 423
BstYI	RGATCY	2 cut(s)	126, 423
BsuI	GTATCC	2 cut(s)	303, 332
BsuRI	GGCC	3 cut(s)	161, 169, 319
BtgI	CCRYGG	1 cut(s)	156
BtsCI	GGATG	3 cut(s)	114, 157, 305
BtsIMutI	CAGTG	1 cut(s)	252
Cac8I	GCNNGC	2 cut(s)	489, 541
CaiI	CAGNNNCTG	1 cut(s)	56
CfoI	GCGC	1 cut(s)	305
CviAII	CATG	2 cut(s)	157, 547
CviJI	RGCY	9 cut(s)	56, 86, 120, 161, 169, 230, 244, 319, 410
CviKI_1	RGCY	9 cut(s)	56, 86, 120, 161, 169, 230, 244, 319, 410
DdeI	CTNAG	1 cut(s)	411
DpnI	GATC	4 cut(s)	128, 258, 425, 670
DpnII	GATC	4 cut(s)	126, 256, 423, 668
EaeI	YGGCCR	2 cut(s)	159, 167
Eam1104I	CTCTTC	4 cut(s)	503, 529, 609, 627
EarI	CTCTTC	4 cut(s)	503, 529, 609, 627
Eco130I	CCWWGG	2 cut(s)	156, 639
Eco147I	AGGCCT	1 cut(s)	319
Eco57I	CTGAAG	2 cut(s)	107, 408
EcoNI	CCTNNNNNAGG	1 cut(s)	313
EcoT14I	CCWWGG	2 cut(s)	156, 639
ErhI	CCWWGG	2 cut(s)	156, 639
FaeI	CATG	2 cut(s)	160, 550
FaiI	YATR	4 cut(s)	158, 372, 438, 548
FatI	CATG	2 cut(s)	156, 546
Fnu4HI	GCNGC	4 cut(s)	51, 54, 57, 167
FokI	GGATG	3 cut(s)	121, 164, 292
Fsp4HI	GCNGC	4 cut(s)	51, 54, 57, 167
FspBI	CTAG	2 cut(s)	87, 288
GlaI	GCGC	1 cut(s)	304
GluI	GCNGC	4 cut(s)	51, 54, 57, 167
HaeIII	GGCC	3 cut(s)	161, 169, 319
HapII	CCGG	1 cut(s)	162
HhaI	GCGC	1 cut(s)	305
Hin1II	CATG	2 cut(s)	160, 550
Hin6I	GCGC	1 cut(s)	303
HinP1I	GCGC	1 cut(s)	303
HindIII	AAGCTT	1 cut(s)	228
HinfI	GANTC	3 cut(s)	4, 298, 635
HpaII	CCGG	1 cut(s)	162
HphI	GGTGA	3 cut(s)	191, 236, 655
Hpy188I	TCNGA	4 cut(s)	16, 126, 297, 414
Hpy188III	TCNNGA	2 cut(s)	380, 427
HpyAV	CCTTC	3 cut(s)	131, 330, 345
HpyCH4III	ACNGT	1 cut(s)	96
HpyCH4V	TGCA	9 cut(s)	20, 44, 50, 59, 148, 332, 455, 487, 550
HpyF10VI	GCNNNNNNNGC	9 cut(s)	50, 56, 62, 218, 227, 250, 461, 596, 708
HpyF3I	CTNAG	1 cut(s)	411
Hsp92II	CATG	2 cut(s)	160, 550
HspAI	GCGC	1 cut(s)	303
Kzo9I	GATC	4 cut(s)	126, 256, 423, 668
LguI	GCTCTTC	1 cut(s)	529
LmnI	GCTCC	2 cut(s)	526, 596
Lsp1109I	GCAGC	3 cut(s)	43, 62, 65
LweI	GCATC	5 cut(s)	7, 142, 314, 385, 474
MaeI	CTAG	2 cut(s)	87, 288
MalI	GATC	4 cut(s)	128, 258, 425, 670
MboI	GATC	4 cut(s)	126, 256, 423, 668
MflI	RGATCY	2 cut(s)	126, 423
MhlI	GDGCHC	1 cut(s)	607
MluCI	AATT	4 cut(s)	456, 495, 521, 576
MlyI	GAGTC	2 cut(s)	13, 644
MnlI	CCTC	3 cut(s)	105, 319, 587
MseI	TTAA	4 cut(s)	417, 498, 657, 690
MslI	CAYNNNNRTG	1 cut(s)	75
MspA1I	CMGCKG	1 cut(s)	56
MspI	CCGG	1 cut(s)	162
MspR9I	CCNGG	1 cut(s)	163
Mva1269I	GAATGC	1 cut(s)	223
MvnI	CGCG	1 cut(s)	303
MwoI	GCNNNNNNNGC	9 cut(s)	50, 56, 62, 218, 227, 250, 461, 596, 708
NciI	CCSGG	1 cut(s)	163
NcoI	CCATGG	1 cut(s)	156
NdeII	GATC	4 cut(s)	126, 256, 423, 668
NlaIII	CATG	2 cut(s)	160, 550
NspI	RCATGY	1 cut(s)	550
PceI	AGGCCT	1 cut(s)	319
PciSI	GCTCTTC	1 cut(s)	529
PctI	GAATGC	1 cut(s)	223
PfeI	GAWTC	1 cut(s)	298
PflMI	CCANNNNNTGG	1 cut(s)	176
PkrI	GCNGC	4 cut(s)	52, 55, 58, 168
PleI	GAGTC	2 cut(s)	12, 643
PpsI	GAGTC	2 cut(s)	12, 643
PstI	CTGCAG	2 cut(s)	46, 334
PstNI	CAGNNNCTG	1 cut(s)	56
PsuI	RGATCY	2 cut(s)	126, 423
PvuII	CAGCTG	1 cut(s)	56
RseI	CAYNNNNRTG	1 cut(s)	75
SapI	GCTCTTC	1 cut(s)	529
SaqAI	TTAA	4 cut(s)	417, 498, 657, 690
SatI	GCNGC	4 cut(s)	51, 54, 57, 167
Sau3AI	GATC	4 cut(s)	126, 256, 423, 668
SchI	GAGTC	2 cut(s)	13, 644
ScrFI	CCNGG	1 cut(s)	163
SduI	GDGCHC	1 cut(s)	607
SetI	ASST	7 cut(s)	58, 88, 232, 293, 412, 645, 657
SfaNI	GCATC	5 cut(s)	7, 142, 314, 385, 474
SfcI	CTRYAG	2 cut(s)	42, 330
SmiMI	CAYNNNNRTG	1 cut(s)	75
SmlI	CTYRAG	1 cut(s)	130
SmoI	CTYRAG	1 cut(s)	130
Sse9I	AATT	4 cut(s)	456, 495, 521, 576
SseBI	AGGCCT	1 cut(s)	319
SsiI	CCGC	2 cut(s)	166, 433
SspMI	CTAG	2 cut(s)	87, 288
StuI	AGGCCT	1 cut(s)	319
StyD4I	CCNGG	1 cut(s)	161
StyI	CCWWGG	2 cut(s)	156, 639
TaaI	ACNGT	1 cut(s)	96
TaqI	TCGA	1 cut(s)	30
TasI	AATT	4 cut(s)	456, 495, 521, 576
TauI	GCSGC	1 cut(s)	169
TfiI	GAWTC	1 cut(s)	298
Tru1I	TTAA	4 cut(s)	417, 498, 657, 690
Tru9I	TTAA	4 cut(s)	417, 498, 657, 690
TscAI	CASTG	1 cut(s)	252
TseI	GCWGC	3 cut(s)	50, 53, 56
TspDTI	ATGAA	2 cut(s)	93, 645
TspRI	CASTG	1 cut(s)	252
Van91I	CCANNNNNTGG	1 cut(s)	176
XagI	CCTNNNNNAGG	1 cut(s)	313
XceI	RCATGY	1 cut(s)	550
XspI	CTAG	2 cut(s)	87, 288

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.