Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0005794

Physical Location & Seq

Genomic Coordinates Forward (+)

17470766 .. 17474751

Gene Structure 3986 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G226800.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1071 bp

ATGAGTGAAACTGAAACCTCCAATTCAGTCCCCAAGAACGAGAACCCAAAAGAGGTAGAACCGGCGCCAAAGCAAAAGCAAAAGCGTGAAAGCAATTCCGAGGACTCTATTTCAGCTGCAAAGAAGTTGAAAACCGAACAAGAGCAAGACCCAGGAGTTGATTTAGGTGAAGGGAACAAGGATAGTGGGGTCAATGAGCCAAATTCAGGTGGGAGGGAAATGAGTTTTAAGATTGAAGCTGATGCAGCCGAGGATAAGGGGTTACGGCACGCCATGGAGGACGCTTGGGTTGTGCTCTTGGACGCCAGCTTGGATTTTCCGGGAAAATTGAGATGTGCGCATTTTGCAATTTATGATGGGCATGGAGGTCGATTAGCTGCAGAGTATGCTCAGAAGCATTTACATACAAATGTGCTTTCAGCCGGATTACCACGTGAGTTGTTGGATGTAAAAACAGCCAAGAAAGCCATACTTGATGGTTTTCGGAAAACTGATGAGTCTGTTCTTCAAGAAAGTGCTGCAGGGGGATGGCAGGATGGTGCTACAGCTGTATGTGTTTGGATATTAGGAAAAACTGTTTTTGTTGCTAACGTTGGGGATGCAAAAGCAGTGGTAGCAAGATCATCTCCTGCTGAGGGATTGAAGAATGGATCTGATGAAGCATGTCATCTGAAGGCCATTGTTTTAACAAGGGAACACAAAGCTATCTATGCACAAGAGCGTGCTCGTATTCAGAAGGCTGGTGGAAATGTGAGTTCAAATGGACGACTACAGGGGCGCCTTGAAGTTTCTAGGGCCTTCGGAGATCGCCATTTCAAAAAGGTGGGTGTTGTTGCAACCCCAGATATTCATTCATTTGACCTTACGGAGAGAGAGCACTTCATAATTCTTGGTTGTGACGGCCTCTGGGGGGTAATTGGACCAAGTGATGCTGTTGCTTTTGTTCAAAAACTTTTGAAGGAGGGACTACCTGTTTCAACTATTAGCCGCCGTCTTGTAAAAGAAGCTGTGCGTGAACGGCGCTGTAAAGATAACTGCACTGTAATCATAATCATGTTCAGGCACAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PP2C

Protein Analysis

357

Amino Acids

38.8

Weight (kDa)

7.67

Isoelectric Point (pI)

45.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005794)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18030 AT1G18030
fragaria_vesca	FvH4_5g16840 FvH4_5g16840 FvH4_5g16840 FvH4_5g16840 FvH4_5g16840
malus_domestica	MD06G1222300.v1.1
prunus_persica	Prupe.5G226800_v2.0.a1 Prupe.5G226800_v2.0.a1 Prupe.5G226800_v2.0.a1 Prupe.5G226800_v2.0.a1
pyrus_communis	pycom06g19780
rosa_chinensis	RchiOBHm_Chr7g0179231
rosa_laevigata	RLG00000005371
rosa_multiflora	Rmu_co8321161.1_g000001 Rmu_sc0009798.1_g000003
rosa_roxburghii	Rroxscaffold_3G00274200
rosa_rugosa	Rorug04G0053600 Rorug06G0422500 Rorug06G0422600
rosa_samantha	Rh7AG021700 Rh7AG021800 Rh7BG021700 Rh7CG022900 Rh7CG023000 Rh7DG022300
rosa_wichuraiana	Rw7G001790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	339
AccB1I	GGYRCC	2 cut(s)	64, 777
AciI	CCGC	1 cut(s)	988
AclI	AACGTT	1 cut(s)	591
AclWI	GGATC	1 cut(s)	658
AcsI	RAATTY	1 cut(s)	202
AcuI	CTGAAG	1 cut(s)	692
AcvI	CACGTG	1 cut(s)	434
AcyI	GRCGYC	3 cut(s)	65, 303, 778
AfiI	CCNNNNNNNGG	4 cut(s)	52, 206, 635, 910
AjnI	CCWGG	1 cut(s)	151
AluBI	AGCT	7 cut(s)	116, 239, 309, 377, 548, 704, 1007
AluI	AGCT	7 cut(s)	116, 239, 309, 377, 548, 704, 1007
Alw21I	GWGCWC	3 cut(s)	297, 727, 879
AlwI	GGATC	1 cut(s)	658
AoxI	GGCC	3 cut(s)	675, 795, 901
ApeKI	GCWGC	4 cut(s)	116, 245, 377, 518
ApoI	RAATTY	1 cut(s)	202
AspLEI	GCGC	4 cut(s)	67, 340, 780, 1023
AspS9I	GGNCC	2 cut(s)	795, 920
AsuC2I	CCSGG	1 cut(s)	321
AsuHPI	GGTGA	1 cut(s)	179
AvaII	GGWCC	1 cut(s)	920
BanI	GGYRCC	2 cut(s)	64, 777
BbrPI	CACGTG	1 cut(s)	434
Bbv12I	GWGCWC	3 cut(s)	297, 727, 879
BbvCI	CCTCAGC	1 cut(s)	633
BbvI	GCAGC	4 cut(s)	103, 257, 364, 505
BccI	CCATC	4 cut(s)	350, 470, 522, 530
BceAI	ACGGC	4 cut(s)	281, 916, 975, 1034
BcgI	CGANNNNNNTGC	2 cut(s)	350, 384
BciT130I	CCWGG	1 cut(s)	153
BcnI	CCSGG	1 cut(s)	321
BfaI	CTAG	1 cut(s)	792
BfmI	CTRYAG	4 cut(s)	378, 519, 543, 770
BfoI	RGCGCY	3 cut(s)	68, 781, 1024
BisI	GCNGC	5 cut(s)	117, 246, 378, 519, 988
BlsI	GCNGC	5 cut(s)	118, 247, 379, 520, 989
Bme1390I	CCNGG	2 cut(s)	153, 321
Bme18I	GGWCC	1 cut(s)	920
BmgT120I	GGNCC	2 cut(s)	795, 920
BmiI	GGNNCC	2 cut(s)	66, 779
BmrFI	CCNGG	2 cut(s)	153, 321
BmsI	GCATC	3 cut(s)	232, 589, 919
Bpu10I	CCTNAGC	1 cut(s)	633
BpuMI	CCSGG	1 cut(s)	321
BsaAI	YACGTR	1 cut(s)	434
BsaHI	GRCGYC	3 cut(s)	65, 303, 778
BsaJI	CCNNGG	4 cut(s)	99, 151, 249, 273
Bsc4I	CCNNNNNNNGG	4 cut(s)	52, 206, 635, 910
Bse118I	RCCGGY	1 cut(s)	61
BseBI	CCWGG	1 cut(s)	153
BseDI	CCNNGG	4 cut(s)	99, 151, 249, 273
BseGI	GGATG	4 cut(s)	451, 533, 541, 604
BseLI	CCNNNNNNNGG	4 cut(s)	52, 206, 635, 910
BseMII	CTCAG	2 cut(s)	404, 624
BseXI	GCAGC	4 cut(s)	103, 257, 364, 505
BsgI	GTGCAG	1 cut(s)	1021
BshFI	GGCC	3 cut(s)	677, 797, 903
BshNI	GGYRCC	2 cut(s)	64, 777
BsiHKAI	GWGCWC	3 cut(s)	297, 727, 879
BsiSI	CCGG	3 cut(s)	62, 320, 423
BslFI	GGGAC	2 cut(s)	14, 978
BslI	CCNNNNNNNGG	4 cut(s)	52, 206, 635, 910
BsmFI	GGGAC	2 cut(s)	14, 978
BsnI	GGCC	3 cut(s)	677, 797, 903
Bsp1286I	GDGCHC	3 cut(s)	297, 727, 879
Bsp143I	GATC	3 cut(s)	620, 650, 805
Bsp19I	CCATGG	1 cut(s)	273
BspACI	CCGC	1 cut(s)	988
BspANI	GGCC	3 cut(s)	677, 797, 903
BspCNI	CTCAG	2 cut(s)	403, 625
BspLI	GGNNCC	2 cut(s)	66, 779
BspMAI	CTGCAG	2 cut(s)	382, 523
BspPI	GGATC	1 cut(s)	658
BspT107I	GGYRCC	2 cut(s)	64, 777
BsrFI	RCCGGY	1 cut(s)	61
BssAI	RCCGGY	1 cut(s)	61
BssECI	CCNNGG	4 cut(s)	99, 151, 249, 273
BssMI	GATC	3 cut(s)	620, 650, 805
BssNI	GRCGYC	3 cut(s)	65, 303, 778
BssT1I	CCWWGG	1 cut(s)	273
Bst2UI	CCWGG	1 cut(s)	153
Bst4CI	ACNGT	2 cut(s)	577, 1042
BstACI	GRCGYC	3 cut(s)	65, 303, 778
BstAPI	GCANNNNNTGC	1 cut(s)	386
BstBAI	YACGTR	1 cut(s)	434
BstC8I	GCNNGC	3 cut(s)	270, 307, 723
BstDEI	CTNAG	2 cut(s)	390, 633
BstDSI	CCRYGG	1 cut(s)	273
BstF5I	GGATG	4 cut(s)	451, 533, 541, 604
BstH2I	RGCGCY	3 cut(s)	68, 781, 1024
BstHHI	GCGC	4 cut(s)	67, 340, 780, 1023
BstKTI	GATC	3 cut(s)	623, 653, 808
BstMBI	GATC	3 cut(s)	620, 650, 805
BstMWI	GCNNNNNNNGC	7 cut(s)	245, 344, 386, 464, 614, 710, 1018
BstNI	CCWGG	1 cut(s)	153
BstNSI	RCATGY	1 cut(s)	666
BstSCI	CCNGG	2 cut(s)	151, 319
BstSFI	CTRYAG	4 cut(s)	378, 519, 543, 770
BstV1I	GCAGC	4 cut(s)	103, 257, 364, 505
BstX2I	RGATCY	1 cut(s)	650
BstYI	RGATCY	1 cut(s)	650
BsuRI	GGCC	3 cut(s)	677, 797, 903
BtgI	CCRYGG	1 cut(s)	273
BtsCI	GGATG	4 cut(s)	451, 533, 541, 604
BtsI	GCAGTG	1 cut(s)	615
BtsIMutI	CAGTG	2 cut(s)	615, 1038
Cac8I	GCNNGC	3 cut(s)	270, 307, 723
CfoI	GCGC	4 cut(s)	67, 340, 780, 1023
Cfr10I	RCCGGY	1 cut(s)	61
Cfr13I	GGNCC	2 cut(s)	795, 920
CseI	GACGC	2 cut(s)	290, 311
CspCI	CAANNNNNGTGG	6 cut(s)	166, 201, 420, 455, 591, 626
CviAII	CATG	4 cut(s)	274, 362, 663, 1054
DdeI	CTNAG	2 cut(s)	390, 633
DinI	GGCGCC	2 cut(s)	66, 779
DpnI	GATC	3 cut(s)	622, 652, 807
DpnII	GATC	3 cut(s)	620, 650, 805
Eco130I	CCWWGG	1 cut(s)	273
Eco47I	GGWCC	1 cut(s)	920
Eco57I	CTGAAG	1 cut(s)	692
Eco72I	CACGTG	1 cut(s)	434
EcoO109I	RGGNCCY	1 cut(s)	795
EcoRII	CCWGG	1 cut(s)	151
EcoT14I	CCWWGG	1 cut(s)	273
EgeI	GGCGCC	2 cut(s)	66, 779
EheI	GGCGCC	2 cut(s)	66, 779
ErhI	CCWWGG	1 cut(s)	273
FaeI	CATG	4 cut(s)	277, 365, 666, 1057
FalI	AAGNNNNNCTT	2 cut(s)	456, 488
FaqI	GGGAC	2 cut(s)	14, 978
FatI	CATG	4 cut(s)	273, 361, 662, 1053
Fnu4HI	GCNGC	5 cut(s)	117, 246, 378, 519, 988
FokI	GGATG	4 cut(s)	458, 540, 548, 611
Fsp4HI	GCNGC	5 cut(s)	117, 246, 378, 519, 988
FspAI	RTGCGCAY	1 cut(s)	339
FspBI	CTAG	1 cut(s)	792
FspI	TGCGCA	1 cut(s)	339
GlaI	GCGC	4 cut(s)	66, 339, 779, 1022
GluI	GCNGC	5 cut(s)	117, 246, 378, 519, 988
HaeII	RGCGCY	3 cut(s)	68, 781, 1024
HaeIII	GGCC	3 cut(s)	677, 797, 903
HapII	CCGG	3 cut(s)	62, 320, 423
HgaI	GACGC	2 cut(s)	290, 311
HhaI	GCGC	4 cut(s)	67, 340, 780, 1023
Hin1I	GRCGYC	3 cut(s)	65, 303, 778
Hin1II	CATG	4 cut(s)	277, 365, 666, 1057
Hin6I	GCGC	4 cut(s)	65, 338, 778, 1021
HinP1I	GCGC	4 cut(s)	65, 338, 778, 1021
HinfI	GANTC	2 cut(s)	104, 497
HpaII	CCGG	3 cut(s)	62, 320, 423
HphI	GGTGA	1 cut(s)	179
Hpy166II	GTNNAC	1 cut(s)	1016
Hpy188I	TCNGA	7 cut(s)	100, 393, 486, 655, 672, 735, 803
Hpy188III	TCNNGA	1 cut(s)	509
Hpy8I	GTNNAC	1 cut(s)	1016
HpyAV	CCTTC	5 cut(s)	164, 667, 730, 808, 952
HpyCH4III	ACNGT	2 cut(s)	577, 1042
HpyCH4IV	ACGT	2 cut(s)	433, 591
HpyCH4V	TGCA	9 cut(s)	119, 245, 347, 380, 521, 602, 713, 836, 1038
HpyF10VI	GCNNNNNNNGC	7 cut(s)	245, 344, 386, 464, 614, 710, 1018
HpyF3I	CTNAG	2 cut(s)	390, 633
HpySE526I	ACGT	2 cut(s)	433, 591
Hsp92I	GRCGYC	3 cut(s)	65, 303, 778
Hsp92II	CATG	4 cut(s)	277, 365, 666, 1057
HspAI	GCGC	4 cut(s)	65, 338, 778, 1021
KasI	GGCGCC	2 cut(s)	64, 777
Kzo9I	GATC	3 cut(s)	620, 650, 805
Lsp1109I	GCAGC	4 cut(s)	103, 257, 364, 505
LweI	GCATC	3 cut(s)	232, 589, 919
MaeI	CTAG	1 cut(s)	792
MaeII	ACGT	2 cut(s)	433, 591
MaeIII	GTNAC	2 cut(s)	261, 896
MalI	GATC	3 cut(s)	622, 652, 807
MboI	GATC	3 cut(s)	620, 650, 805
MboII	GAAGA	2 cut(s)	497, 655
MflI	RGATCY	1 cut(s)	650
MhlI	GDGCHC	3 cut(s)	297, 727, 879
MluCI	AATT	7 cut(s)	22, 94, 202, 326, 348, 885, 915
Mly113I	GGCGCC	2 cut(s)	65, 778
MlyI	GAGTC	2 cut(s)	98, 506
MmeI	TCCRAC	1 cut(s)	423
MseI	TTAA	2 cut(s)	228, 686
MslI	CAYNNNNRTG	2 cut(s)	408, 1052
MspA1I	CMGCKG	2 cut(s)	116, 548
MspI	CCGG	3 cut(s)	62, 320, 423
MspR9I	CCNGG	2 cut(s)	153, 321
MvaI	CCWGG	1 cut(s)	153
MwoI	GCNNNNNNNGC	7 cut(s)	245, 344, 386, 464, 614, 710, 1018
NarI	GGCGCC	2 cut(s)	65, 778
NciI	CCSGG	1 cut(s)	321
NcoI	CCATGG	1 cut(s)	273
NdeII	GATC	3 cut(s)	620, 650, 805
NlaIII	CATG	4 cut(s)	277, 365, 666, 1057
NlaIV	GGNNCC	2 cut(s)	66, 779
NmeAIII	GCCGAG	1 cut(s)	274
NmuCI	GTSAC	1 cut(s)	896
NsbI	TGCGCA	1 cut(s)	339
NspI	RCATGY	1 cut(s)	666
PfoI	TCCNGGA	1 cut(s)	319
PkrI	GCNGC	5 cut(s)	118, 247, 379, 520, 989
PleI	GAGTC	2 cut(s)	98, 505
PluTI	GGCGCC	2 cut(s)	68, 781
PmaCI	CACGTG	1 cut(s)	434
PmlI	CACGTG	1 cut(s)	434
PpsI	GAGTC	2 cut(s)	98, 505
Ppu21I	YACGTR	1 cut(s)	434
Psp1406I	AACGTT	1 cut(s)	591
Psp6I	CCWGG	1 cut(s)	151
PspCI	CACGTG	1 cut(s)	434
PspGI	CCWGG	1 cut(s)	151
PspN4I	GGNNCC	2 cut(s)	66, 779
PspPI	GGNCC	2 cut(s)	795, 920
PstI	CTGCAG	2 cut(s)	382, 523
PsuI	RGATCY	1 cut(s)	650
PvuII	CAGCTG	2 cut(s)	116, 548
RseI	CAYNNNNRTG	2 cut(s)	408, 1052
SaqAI	TTAA	2 cut(s)	228, 686
SatI	GCNGC	5 cut(s)	117, 246, 378, 519, 988
Sau3AI	GATC	3 cut(s)	620, 650, 805
Sau96I	GGNCC	2 cut(s)	795, 920
SchI	GAGTC	2 cut(s)	98, 506
ScrFI	CCNGG	2 cut(s)	153, 321
SduI	GDGCHC	3 cut(s)	297, 727, 879
SfaNI	GCATC	3 cut(s)	232, 589, 919
SfcI	CTRYAG	4 cut(s)	378, 519, 543, 770
SfoI	GGCGCC	2 cut(s)	66, 779
SinI	GGWCC	1 cut(s)	920
SmiMI	CAYNNNNRTG	2 cut(s)	408, 1052
Sse9I	AATT	7 cut(s)	22, 94, 202, 326, 348, 885, 915
SsiI	CCGC	1 cut(s)	988
SspDI	GGCGCC	2 cut(s)	64, 777
SspMI	CTAG	1 cut(s)	792
StyD4I	CCNGG	2 cut(s)	151, 319
StyI	CCWWGG	1 cut(s)	273
TaaI	ACNGT	2 cut(s)	577, 1042
TaiI	ACGT	2 cut(s)	436, 594
TaqI	TCGA	1 cut(s)	370
TasI	AATT	7 cut(s)	22, 94, 202, 326, 348, 885, 915
TauI	GCSGC	1 cut(s)	990
Tru1I	TTAA	2 cut(s)	228, 686
Tru9I	TTAA	2 cut(s)	228, 686
TscAI	CASTG	2 cut(s)	615, 1045
TseFI	GTSAC	1 cut(s)	896
TseI	GCWGC	4 cut(s)	116, 245, 377, 518
Tsp45I	GTSAC	1 cut(s)	896
TspDTI	ATGAA	4 cut(s)	672, 839, 843, 871
TspGWI	ACGGA	1 cut(s)	881
TspRI	CASTG	2 cut(s)	615, 1045
VpaK11BI	GGWCC	1 cut(s)	920
XapI	RAATTY	1 cut(s)	202
XceI	RCATGY	1 cut(s)	666
XspI	CTAG	1 cut(s)	792

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.