Rh7CG023000

phosphatase 2C

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
1630651 .. 1630962
312 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG023000.1

Sequence Viewer

Length: 312 bp
ATGAGTGAAGCTACCCAAAAATCGAAGCCAAAGCGCGAGAGCGATTCCGGGGATTCAAGCTCAGTTGCAAAGAAGCTGAAAATCGATCAAAGCCAAAACCCAGAAGTTGATTCGAGTGGGAGTGAGGCAAATTCAGATGCGAGGGAAATGGGTTTTGAAATCGAAGCTGAGGTAGCAGAGGATAAGGGGTTAAGGCACGCCATGGAGGACGCGTGGGTTCTGCTCTTGGATGCGAGCTTGGGTTTTCAGGGAAACTTGAGGTTCTTGATGCTTTGGTTTTGCTTATTATGCTCAGTTTTGGGTTTGGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

103

Amino Acids

11.28

Weight (kDa)

4.59

Isoelectric Point (pI)

52.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 36, 212
AcsI RAATTY 1 cut(s) 130
AflIII ACRYGT 1 cut(s) 210
AgsI TTSAA 2 cut(s) 57, 158
AluBI AGCT 5 cut(s) 11, 60, 76, 167, 237
AluI AGCT 5 cut(s) 11, 60, 76, 167, 237
ApoI RAATTY 1 cut(s) 130
AspLEI GCGC 1 cut(s) 36
AsuC2I CCSGG 1 cut(s) 49
BbvCI CCTCAGC 1 cut(s) 168
BcnI CCSGG 1 cut(s) 49
Bme1390I CCNGG 1 cut(s) 49
BmrFI CCNGG 1 cut(s) 49
BmsI GCATC 3 cut(s) 127, 220, 258
Bpu10I CCTNAGC 1 cut(s) 168
BpuEI CTTGAG 1 cut(s) 277
BpuMI CCSGG 1 cut(s) 49
Bsa29I ATCGAT 1 cut(s) 84
BsaJI CCNNGG 2 cut(s) 48, 201
BsaXI ACNNNNNCTCC 2 cut(s) 197, 227
BseCI ATCGAT 1 cut(s) 84
BseDI CCNNGG 2 cut(s) 48, 201
BseGI GGATG 1 cut(s) 235
BseMII CTCAG 3 cut(s) 75, 159, 306
Bsh1236I CGCG 2 cut(s) 36, 212
BshVI ATCGAT 1 cut(s) 84
BsiSI CCGG 1 cut(s) 48
Bsp143I GATC 1 cut(s) 85
Bsp19I CCATGG 1 cut(s) 201
BspCNI CTCAG 3 cut(s) 74, 160, 305
BspDI ATCGAT 1 cut(s) 84
BspFNI CGCG 2 cut(s) 36, 212
BssECI CCNNGG 2 cut(s) 48, 201
BssMI GATC 1 cut(s) 85
BssT1I CCWWGG 1 cut(s) 201
BstC8I GCNNGC 2 cut(s) 198, 235
BstDEI CTNAG 3 cut(s) 61, 168, 292
BstDSI CCRYGG 1 cut(s) 201
BstF5I GGATG 1 cut(s) 235
BstFNI CGCG 2 cut(s) 36, 212
BstHHI GCGC 1 cut(s) 36
BstKTI GATC 1 cut(s) 88
BstMBI GATC 1 cut(s) 85
BstMWI GCNNNNNNNGC 2 cut(s) 173, 288
BstSCI CCNGG 1 cut(s) 47
BstUI CGCG 2 cut(s) 36, 212
Bsu15I ATCGAT 1 cut(s) 84
BsuTUI ATCGAT 1 cut(s) 84
BtgI CCRYGG 1 cut(s) 201
BtsCI GGATG 1 cut(s) 235
Cac8I GCNNGC 2 cut(s) 198, 235
CfoI GCGC 1 cut(s) 36
ClaI ATCGAT 1 cut(s) 84
CseI GACGC 1 cut(s) 218
CviAII CATG 1 cut(s) 202
CviJI RGCY 7 cut(s) 11, 28, 60, 76, 93, 167, 237
CviKI_1 RGCY 7 cut(s) 11, 28, 60, 76, 93, 167, 237
DdeI CTNAG 3 cut(s) 61, 168, 292
DpnI GATC 1 cut(s) 87
DpnII GATC 1 cut(s) 85
Eco130I CCWWGG 1 cut(s) 201
EcoT14I CCWWGG 1 cut(s) 201
ErhI CCWWGG 1 cut(s) 201
FaeI CATG 1 cut(s) 205
FaiI YATR 3 cut(s) 203, 289, 310
FatI CATG 1 cut(s) 201
FokI GGATG 1 cut(s) 242
GlaI GCGC 1 cut(s) 35
HapII CCGG 1 cut(s) 48
HgaI GACGC 1 cut(s) 218
HhaI GCGC 1 cut(s) 36
Hin1II CATG 1 cut(s) 205
Hin6I GCGC 1 cut(s) 34
HinP1I GCGC 1 cut(s) 34
HinfI GANTC 3 cut(s) 44, 53, 110
HpaII CCGG 1 cut(s) 48
Hpy188I TCNGA 1 cut(s) 136
Hpy188III TCNNGA 1 cut(s) 265
HpyCH4V TGCA 1 cut(s) 68
HpyF10VI GCNNNNNNNGC 2 cut(s) 173, 288
HpyF3I CTNAG 3 cut(s) 61, 168, 292
Hsp92II CATG 1 cut(s) 205
HspAI GCGC 1 cut(s) 34
Kzo9I GATC 1 cut(s) 85
LpnPI CCDG 3 cut(s) 61, 114, 233
LweI GCATC 3 cut(s) 127, 220, 258
MalI GATC 1 cut(s) 87
MboI GATC 1 cut(s) 85
MluCI AATT 1 cut(s) 130
MluI ACGCGT 1 cut(s) 210
MnlI CCTC 6 cut(s) 118, 135, 163, 172, 199, 252
MseI TTAA 1 cut(s) 191
MspI CCGG 1 cut(s) 48
MspR9I CCNGG 1 cut(s) 49
MvnI CGCG 2 cut(s) 36, 212
MwoI GCNNNNNNNGC 2 cut(s) 173, 288
NciI CCSGG 1 cut(s) 49
NcoI CCATGG 1 cut(s) 201
NdeII GATC 1 cut(s) 85
NlaIII CATG 1 cut(s) 205
PfeI GAWTC 3 cut(s) 44, 53, 110
SaqAI TTAA 1 cut(s) 191
Sau3AI GATC 1 cut(s) 85
ScrFI CCNGG 1 cut(s) 49
SetI ASST 7 cut(s) 13, 62, 78, 169, 174, 239, 263
SfaNI GCATC 3 cut(s) 127, 220, 258
SmlI CTYRAG 1 cut(s) 256
SmoI CTYRAG 1 cut(s) 256
Sse9I AATT 1 cut(s) 130
StyD4I CCNGG 1 cut(s) 47
StyI CCWWGG 1 cut(s) 201
TaqI TCGA 4 cut(s) 23, 84, 113, 162
TasI AATT 1 cut(s) 130
TfiI GAWTC 3 cut(s) 44, 53, 110
Tru1I TTAA 1 cut(s) 191
Tru9I TTAA 1 cut(s) 191
XapI RAATTY 1 cut(s) 130
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.