NF-X1-type zinc finger protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G10170 AT1G10170 AT1G10170 AT1G10170 |
| fragaria_vesca | FvH4_5g17660 |
| malus_domestica | MD06G1232100.v1.1 MD14G1238900.v1.1 |
| prunus_persica | Prupe.5G236400_v2.0.a1 |
| pyrus_communis | pycom06g20620 pycom14g19990 |
| rosa_chinensis | RchiOBHm_Chr7g0178011 |
| rosa_laevigata | RLG00000005482 |
| rosa_multiflora | Rmu_sc0013399.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00275290 |
| rosa_rugosa | Rorug06G0412300 |
| rosa_samantha | Rh7AG011800 Rh7BG011200 Rh7CG011800 Rh7DG011800 |
| rosa_wichuraiana | Rw7G000930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 839 |
| AccB1I | GGYRCC | 1 cut(s) | 1428 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 940 |
| AccBSI | CCGCTC | 2 cut(s) | 68, 2260 |
| AccI | GTMKAC | 2 cut(s) | 2670, 2957 |
| AccII | CGCG | 1 cut(s) | 3056 |
| AclI | AACGTT | 1 cut(s) | 2874 |
| AcoI | YGGCCR | 4 cut(s) | 254, 853, 1570, 2071 |
| AcsI | RAATTY | 3 cut(s) | 345, 2225, 2329 |
| AcuI | CTGAAG | 5 cut(s) | 603, 1905, 2498, 3225, 3303 |
| AcyI | GRCGYC | 1 cut(s) | 836 |
| AfaI | GTAC | 9 cut(s) | 551, 555, 1660, 1936, 1996, 2411, 2623, 2851, 3123 |
| AfeI | AGCGCT | 1 cut(s) | 2964 |
| AflIII | ACRYGT | 4 cut(s) | 498, 1226, 1958, 1991 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 835 |
| AjiI | CACGTC | 1 cut(s) | 2369 |
| AjnI | CCWGG | 7 cut(s) | 38, 538, 685, 1105, 1930, 2681, 3004 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 130, 162 |
| AleI | CACNNNNGTG | 1 cut(s) | 894 |
| Alw21I | GWGCWC | 3 cut(s) | 484, 1969, 2734 |
| Alw26I | GTCTC | 1 cut(s) | 987 |
| Alw44I | GTGCAC | 1 cut(s) | 2730 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1763 |
| Ama87I | CYCGRG | 4 cut(s) | 477, 745, 2601, 2814 |
| Aor51HI | AGCGCT | 1 cut(s) | 2964 |
| AoxI | GGCC | 6 cut(s) | 254, 853, 1108, 1570, 2071, 2446 |
| ApaLI | GTGCAC | 1 cut(s) | 2730 |
| ApeKI | GCWGC | 9 cut(s) | 119, 211, 214, 1540, 1728, 2109, 2819, 3250, 3253 |
| ApoI | RAATTY | 3 cut(s) | 345, 2225, 2329 |
| AspA2I | CCTAGG | 1 cut(s) | 1970 |
| AspLEI | GCGC | 1 cut(s) | 2965 |
| AspS9I | GGNCC | 7 cut(s) | 13, 36, 91, 749, 917, 1109, 2435 |
| AsuC2I | CCSGG | 2 cut(s) | 746, 747 |
| AsuII | TTCGAA | 1 cut(s) | 1466 |
| AvaI | CYCGRG | 4 cut(s) | 477, 745, 2601, 2814 |
| AvaII | GGWCC | 6 cut(s) | 13, 36, 91, 749, 917, 2435 |
| AvrII | CCTAGG | 1 cut(s) | 1970 |
| AxyI | CCTNAGG | 1 cut(s) | 1799 |
| BaeGI | GKGCMC | 2 cut(s) | 371, 2734 |
| BalI | TGGCCA | 2 cut(s) | 855, 1572 |
| BamHI | GGATCC | 4 cut(s) | 101, 1201, 1492, 2677 |
| BanI | GGYRCC | 1 cut(s) | 1428 |
| BanII | GRGCYC | 3 cut(s) | 478, 484, 2553 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1927, 1959 |
| BbsI | GAAGAC | 2 cut(s) | 1032, 1859 |
| Bbv12I | GWGCWC | 3 cut(s) | 484, 1969, 2734 |
| BbvCI | CCTCAGC | 4 cut(s) | 60, 330, 1698, 2966 |
| BbvI | GCAGC | 9 cut(s) | 106, 223, 226, 1552, 1715, 2121, 2831, 3262, 3265 |
| BccI | CCATC | 6 cut(s) | 205, 459, 1110, 1678, 2511, 3108 |
| BceAI | ACGGC | 2 cut(s) | 107, 1308 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 485, 519, 3216, 3250 |
| BciT130I | CCWGG | 7 cut(s) | 40, 540, 687, 1107, 1932, 2683, 3006 |
| BclI | TGATCA | 1 cut(s) | 2659 |
| BcnI | CCSGG | 2 cut(s) | 746, 747 |
| BcoDI | GTCTC | 1 cut(s) | 987 |
| BfaI | CTAG | 5 cut(s) | 237, 1971, 2118, 3125, 3165 |
| BfmI | CTRYAG | 2 cut(s) | 504, 2958 |
| BfoI | RGCGCY | 1 cut(s) | 2966 |
| BglI | GCCNNNNNGGC | 4 cut(s) | 1107, 1405, 1569, 1708 |
| BisI | GCNGC | 9 cut(s) | 120, 212, 215, 1541, 1729, 2110, 2820, 3251, 3254 |
| BlnI | CCTAGG | 1 cut(s) | 1970 |
| BlpI | GCTNAGC | 1 cut(s) | 51 |
| BlsI | GCNGC | 9 cut(s) | 121, 213, 216, 1542, 1730, 2111, 2821, 3252, 3255 |
| BmcAI | AGTACT | 1 cut(s) | 2411 |
| Bme1390I | CCNGG | 9 cut(s) | 40, 540, 687, 746, 747, 1107, 1932, 2683, 3006 |
| Bme18I | GGWCC | 6 cut(s) | 13, 36, 91, 749, 917, 2435 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 835 |
| BmeT110I | CYCGRG | 4 cut(s) | 477, 745, 2601, 2814 |
| BmgBI | CACGTC | 1 cut(s) | 2369 |
| BmgT120I | GGNCC | 7 cut(s) | 13, 36, 91, 749, 917, 1109, 2435 |
| BmrFI | CCNGG | 9 cut(s) | 40, 540, 687, 746, 747, 1107, 1932, 2683, 3006 |
| BmrI | ACTGGG | 2 cut(s) | 1290, 3307 |
| BmuI | ACTGGG | 2 cut(s) | 1290, 3307 |
| BpiI | GAAGAC | 2 cut(s) | 1032, 1859 |
| Bpu10I | CCTNAGC | 5 cut(s) | 60, 330, 1698, 2943, 2966 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 51 |
| Bpu14I | TTCGAA | 1 cut(s) | 1466 |
| BpuEI | CTTGAG | 3 cut(s) | 415, 692, 2761 |
| BpuMI | CCSGG | 2 cut(s) | 746, 747 |
| Bsa29I | ATCGAT | 1 cut(s) | 3112 |
| BsaAI | YACGTR | 1 cut(s) | 553 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1491 |
| BsaHI | GRCGYC | 1 cut(s) | 836 |
| BsaJI | CCNNGG | 7 cut(s) | 265, 685, 745, 1970, 2681, 2978, 3054 |
| BsaWI | WCCGGW | 1 cut(s) | 831 |
| Bse1I | ACTGG | 5 cut(s) | 1205, 1258, 1285, 2739, 3302 |
| Bse21I | CCTNAGG | 1 cut(s) | 1799 |
| Bse3DI | GCAATG | 3 cut(s) | 1646, 2119, 2835 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1491 |
| BseBI | CCWGG | 7 cut(s) | 40, 540, 687, 1107, 1932, 2683, 3006 |
| BseCI | ATCGAT | 1 cut(s) | 3112 |
| BseDI | CCNNGG | 7 cut(s) | 265, 685, 745, 1970, 2681, 2978, 3054 |
| BseGI | GGATG | 9 cut(s) | 153, 548, 563, 685, 712, 1102, 2314, 2508, 3064 |
| BseJI | GATNNNNATC | 1 cut(s) | 1491 |
| BseMI | GCAATG | 3 cut(s) | 1646, 2119, 2835 |
| BseNI | ACTGG | 5 cut(s) | 1205, 1258, 1285, 2739, 3302 |
| BseRI | GAGGAG | 6 cut(s) | 48, 314, 418, 1632, 2411, 2848 |
| BseSI | GKGCMC | 2 cut(s) | 371, 2734 |
| BseXI | GCAGC | 9 cut(s) | 106, 223, 226, 1552, 1715, 2121, 2831, 3262, 3265 |
| BseYI | CCCAGC | 2 cut(s) | 2596, 2643 |
| BsgI | GTGCAG | 3 cut(s) | 396, 1983, 3083 |
| Bsh1236I | CGCG | 1 cut(s) | 3056 |
| BshFI | GGCC | 6 cut(s) | 256, 855, 1110, 1572, 2073, 2448 |
| BshNI | GGYRCC | 1 cut(s) | 1428 |
| BshVI | ATCGAT | 1 cut(s) | 3112 |
| BsiHKAI | GWGCWC | 3 cut(s) | 484, 1969, 2734 |
| BsiHKCI | CYCGRG | 4 cut(s) | 477, 745, 2601, 2814 |
| BsiSI | CCGG | 4 cut(s) | 746, 832, 2074, 3209 |
| BslFI | GGGAC | 6 cut(s) | 77, 668, 1222, 1679, 1838, 2950 |
| BsmAI | GTCTC | 1 cut(s) | 987 |
| BsmFI | GGGAC | 6 cut(s) | 77, 668, 1222, 1679, 1838, 2950 |
| BsmI | GAATGC | 7 cut(s) | 383, 1358, 1543, 1711, 2641, 2762, 2791 |
| BsnI | GGCC | 6 cut(s) | 256, 855, 1110, 1572, 2073, 2448 |
| BsoBI | CYCGRG | 4 cut(s) | 477, 745, 2601, 2814 |
| Bsp119I | TTCGAA | 1 cut(s) | 1466 |
| Bsp1286I | GDGCHC | 6 cut(s) | 371, 478, 484, 1969, 2553, 2734 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 51 |
| Bsp19I | CCATGG | 2 cut(s) | 265, 2978 |
| BspANI | GGCC | 6 cut(s) | 256, 855, 1110, 1572, 2073, 2448 |
| BspDI | ATCGAT | 1 cut(s) | 3112 |
| BspFNI | CGCG | 1 cut(s) | 3056 |
| BspMAI | CTGCAG | 1 cut(s) | 508 |
| BspT104I | TTCGAA | 1 cut(s) | 1466 |
| BspT107I | GGYRCC | 1 cut(s) | 1428 |
| BsrBI | CCGCTC | 2 cut(s) | 68, 2260 |
| BsrDI | GCAATG | 3 cut(s) | 1646, 2119, 2835 |
| BsrI | ACTGG | 5 cut(s) | 1205, 1258, 1285, 2739, 3302 |
| BssECI | CCNNGG | 7 cut(s) | 265, 685, 745, 1970, 2681, 2978, 3054 |
| BssNI | GRCGYC | 1 cut(s) | 836 |
| BssT1I | CCWWGG | 3 cut(s) | 265, 1970, 2978 |
| Bst2UI | CCWGG | 7 cut(s) | 40, 540, 687, 1107, 1932, 2683, 3006 |
| Bst6I | CTCTTC | 3 cut(s) | 1924, 2480, 3030 |
| BstACI | GRCGYC | 1 cut(s) | 836 |
| BstBAI | YACGTR | 1 cut(s) | 553 |
| BstBI | TTCGAA | 1 cut(s) | 1466 |
| BstC8I | GCNNGC | 9 cut(s) | 66, 857, 1087, 1175, 1875, 1985, 2169, 2526, 3066 |
| BstDSI | CCRYGG | 3 cut(s) | 265, 2978, 3054 |
| BstF5I | GGATG | 9 cut(s) | 153, 548, 563, 685, 712, 1102, 2314, 2508, 3064 |
| BstFNI | CGCG | 1 cut(s) | 3056 |
| BstH2I | RGCGCY | 1 cut(s) | 2966 |
| BstHHI | GCGC | 1 cut(s) | 2965 |
| BstMAI | GTCTC | 1 cut(s) | 987 |
| BstNI | CCWGG | 7 cut(s) | 40, 540, 687, 1107, 1932, 2683, 3006 |
| BstNSI | RCATGY | 8 cut(s) | 502, 1155, 1230, 1623, 1793, 1877, 1962, 1995 |
| BstSCI | CCNGG | 9 cut(s) | 38, 538, 685, 744, 745, 1105, 1930, 2681, 3004 |
| BstSFI | CTRYAG | 2 cut(s) | 504, 2958 |
| BstSLI | GKGCMC | 2 cut(s) | 371, 2734 |
| BstSNI | TACGTA | 1 cut(s) | 553 |
| BstUI | CGCG | 1 cut(s) | 3056 |
| BstV1I | GCAGC | 9 cut(s) | 106, 223, 226, 1552, 1715, 2121, 2831, 3262, 3265 |
| BstV2I | GAAGAC | 2 cut(s) | 1032, 1859 |
| BstX2I | RGATCY | 5 cut(s) | 101, 1201, 1492, 2205, 2677 |
| BstYI | RGATCY | 5 cut(s) | 101, 1201, 1492, 2205, 2677 |
| Bsu15I | ATCGAT | 1 cut(s) | 3112 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1799 |
| BsuRI | GGCC | 6 cut(s) | 256, 855, 1110, 1572, 2073, 2448 |
| BsuTUI | ATCGAT | 1 cut(s) | 3112 |
| BtgI | CCRYGG | 3 cut(s) | 265, 2978, 3054 |
| BtrI | CACGTC | 1 cut(s) | 2369 |
| BtsCI | GGATG | 9 cut(s) | 153, 548, 563, 685, 712, 1102, 2314, 2508, 3064 |
| BtsI | GCAGTG | 7 cut(s) | 114, 743, 1444, 1573, 1868, 2896, 3096 |
| Cac8I | GCNNGC | 9 cut(s) | 66, 857, 1087, 1175, 1875, 1985, 2169, 2526, 3066 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1763 |
| CfoI | GCGC | 1 cut(s) | 2965 |
| Cfr13I | GGNCC | 7 cut(s) | 13, 36, 91, 749, 917, 1109, 2435 |
| Cfr42I | CCGCGG | 1 cut(s) | 3057 |
| Cfr9I | CCCGGG | 1 cut(s) | 745 |
| ClaI | ATCGAT | 1 cut(s) | 3112 |
| CseI | GACGC | 1 cut(s) | 875 |
| CsiI | ACCWGGT | 1 cut(s) | 1930 |
| Csp6I | GTAC | 9 cut(s) | 550, 554, 1659, 1935, 1995, 2410, 2622, 2850, 3122 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1281, 1316, 1828, 1863 |
| CviQI | GTAC | 9 cut(s) | 550, 554, 1659, 1935, 1995, 2410, 2622, 2850, 3122 |
| DraI | TTTAAA | 1 cut(s) | 3204 |
| DriI | GACNNNNNGTC | 1 cut(s) | 835 |
| EaeI | YGGCCR | 4 cut(s) | 254, 853, 1570, 2071 |
| Eam1104I | CTCTTC | 3 cut(s) | 1924, 2480, 3030 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 835 |
| EarI | CTCTTC | 3 cut(s) | 1924, 2480, 3030 |
| EciI | GGCGGA | 1 cut(s) | 1423 |
| Ecl136II | GAGCTC | 1 cut(s) | 482 |
| Eco105I | TACGTA | 1 cut(s) | 553 |
| Eco130I | CCWWGG | 3 cut(s) | 265, 1970, 2978 |
| Eco24I | GRGCYC | 3 cut(s) | 478, 484, 2553 |
| Eco47I | GGWCC | 6 cut(s) | 13, 36, 91, 749, 917, 2435 |
| Eco47III | AGCGCT | 1 cut(s) | 2964 |
| Eco53kI | GAGCTC | 1 cut(s) | 482 |
| Eco57I | CTGAAG | 5 cut(s) | 603, 1905, 2498, 3225, 3303 |
| Eco81I | CCTNAGG | 1 cut(s) | 1799 |
| Eco88I | CYCGRG | 4 cut(s) | 477, 745, 2601, 2814 |
| EcoICRI | GAGCTC | 1 cut(s) | 482 |
| EcoO109I | RGGNCCY | 5 cut(s) | 13, 91, 917, 1109, 2435 |
| EcoRI | GAATTC | 1 cut(s) | 2329 |
| EcoRII | CCWGG | 7 cut(s) | 38, 538, 685, 1105, 1930, 2681, 3004 |
| EcoT14I | CCWWGG | 3 cut(s) | 265, 1970, 2978 |
| EcoT22I | ATGCAT | 3 cut(s) | 383, 1875, 2791 |
| EcoT38I | GRGCYC | 3 cut(s) | 478, 484, 2553 |
| ErhI | CCWWGG | 3 cut(s) | 265, 1970, 2978 |
| FaqI | GGGAC | 6 cut(s) | 77, 668, 1222, 1679, 1838, 2950 |
| FauI | CCCGC | 4 cut(s) | 73, 621, 653, 786 |
| FauNDI | CATATG | 1 cut(s) | 246 |
| FbaI | TGATCA | 1 cut(s) | 2659 |
| FblI | GTMKAC | 2 cut(s) | 2670, 2957 |
| Fnu4HI | GCNGC | 9 cut(s) | 120, 212, 215, 1541, 1729, 2110, 2820, 3251, 3254 |
| FokI | GGATG | 9 cut(s) | 140, 550, 555, 692, 719, 1089, 2321, 2515, 3071 |
| FriOI | GRGCYC | 3 cut(s) | 478, 484, 2553 |
| Fsp4HI | GCNGC | 9 cut(s) | 120, 212, 215, 1541, 1729, 2110, 2820, 3251, 3254 |
| FspBI | CTAG | 5 cut(s) | 237, 1971, 2118, 3125, 3165 |
| GlaI | GCGC | 1 cut(s) | 2964 |
| GluI | GCNGC | 9 cut(s) | 120, 212, 215, 1541, 1729, 2110, 2820, 3251, 3254 |
| GsaI | CCCAGC | 2 cut(s) | 2600, 2647 |
| HaeII | RGCGCY | 1 cut(s) | 2966 |
| HaeIII | GGCC | 6 cut(s) | 256, 855, 1110, 1572, 2073, 2448 |
| HapII | CCGG | 4 cut(s) | 746, 832, 2074, 3209 |
| HgaI | GACGC | 1 cut(s) | 875 |
| HhaI | GCGC | 1 cut(s) | 2965 |
| Hin1I | GRCGYC | 1 cut(s) | 836 |
| Hin6I | GCGC | 1 cut(s) | 2963 |
| HinP1I | GCGC | 1 cut(s) | 2963 |
| HindIII | AAGCTT | 6 cut(s) | 139, 869, 1064, 1171, 2145, 2522 |
| HpaII | CCGG | 4 cut(s) | 746, 832, 2074, 3209 |
| Hpy188I | TCNGA | 9 cut(s) | 202, 456, 622, 829, 1344, 2344, 2356, 2453, 3283 |
| Hpy99I | CGWCG | 2 cut(s) | 84, 2629 |
| HpyCH4IV | ACGT | 5 cut(s) | 552, 784, 836, 2368, 2874 |
| HpySE526I | ACGT | 5 cut(s) | 552, 784, 836, 2368, 2874 |
| Hsp92I | GRCGYC | 1 cut(s) | 836 |
| HspAI | GCGC | 1 cut(s) | 2963 |
| KflI | GGGWCCC | 1 cut(s) | 91 |
| Ksp22I | TGATCA | 1 cut(s) | 2659 |
| KspI | CCGCGG | 1 cut(s) | 3057 |
| Lsp1109I | GCAGC | 9 cut(s) | 106, 223, 226, 1552, 1715, 2121, 2831, 3262, 3265 |
| MabI | ACCWGGT | 1 cut(s) | 1930 |
| MaeI | CTAG | 5 cut(s) | 237, 1971, 2118, 3125, 3165 |
| MaeII | ACGT | 5 cut(s) | 552, 784, 836, 2368, 2874 |
| MaeIII | GTNAC | 9 cut(s) | 437, 740, 887, 1835, 1892, 2006, 2050, 2096, 2575 |
| MbiI | CCGCTC | 2 cut(s) | 68, 2260 |
| MfeI | CAATTG | 1 cut(s) | 2184 |
| MflI | RGATCY | 5 cut(s) | 101, 1201, 1492, 2205, 2677 |
| MhlI | GDGCHC | 6 cut(s) | 371, 478, 484, 1969, 2553, 2734 |
| MlsI | TGGCCA | 2 cut(s) | 855, 1572 |
| MluNI | TGGCCA | 2 cut(s) | 855, 1572 |
| MlyI | GAGTC | 4 cut(s) | 214, 311, 2093, 3170 |
| MmeI | TCCRAC | 6 cut(s) | 129, 1235, 2235, 2820, 2908, 2990 |
| Mox20I | TGGCCA | 2 cut(s) | 855, 1572 |
| Mph1103I | ATGCAT | 3 cut(s) | 383, 1875, 2791 |
| MscI | TGGCCA | 2 cut(s) | 855, 1572 |
| Msp20I | TGGCCA | 2 cut(s) | 855, 1572 |
| MspA1I | CMGCKG | 3 cut(s) | 1728, 2540, 3056 |
| MspI | CCGG | 4 cut(s) | 746, 832, 2074, 3209 |
| MspR9I | CCNGG | 9 cut(s) | 40, 540, 687, 746, 747, 1107, 1932, 2683, 3006 |
| MunI | CAATTG | 1 cut(s) | 2184 |
| Mva1269I | GAATGC | 7 cut(s) | 383, 1358, 1543, 1711, 2641, 2762, 2791 |
| MvaI | CCWGG | 7 cut(s) | 40, 540, 687, 1107, 1932, 2683, 3006 |
| MvnI | CGCG | 1 cut(s) | 3056 |
| NciI | CCSGG | 2 cut(s) | 746, 747 |
| NcoI | CCATGG | 2 cut(s) | 265, 2978 |
| NdeI | CATATG | 1 cut(s) | 246 |
| NmeAIII | GCCGAG | 1 cut(s) | 2736 |
| NmuCI | GTSAC | 6 cut(s) | 740, 887, 1892, 2006, 2050, 2096 |
| NsiI | ATGCAT | 3 cut(s) | 383, 1875, 2791 |
| NspI | RCATGY | 8 cut(s) | 502, 1155, 1230, 1623, 1793, 1877, 1962, 1995 |
| NspV | TTCGAA | 1 cut(s) | 1466 |
| OliI | CACNNNNGTG | 1 cut(s) | 894 |
| PaeI | GCATGC | 1 cut(s) | 1877 |
| PaeR7I | CTCGAG | 2 cut(s) | 477, 2814 |
| PciI | ACATGT | 4 cut(s) | 498, 1226, 1958, 1991 |
| PctI | GAATGC | 7 cut(s) | 383, 1358, 1543, 1711, 2641, 2762, 2791 |
| PfeI | GAWTC | 7 cut(s) | 292, 514, 577, 1553, 2189, 3020, 3218 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 940 |
| PfoI | TCCNGGA | 1 cut(s) | 538 |
| PkrI | GCNGC | 9 cut(s) | 121, 213, 216, 1542, 1730, 2111, 2821, 3252, 3255 |
| PleI | GAGTC | 4 cut(s) | 213, 311, 2093, 3170 |
| PpsI | GAGTC | 4 cut(s) | 213, 311, 2093, 3170 |
| Ppu21I | YACGTR | 1 cut(s) | 553 |
| PpuMI | RGGWCCY | 4 cut(s) | 13, 91, 917, 2435 |
| PscI | ACATGT | 4 cut(s) | 498, 1226, 1958, 1991 |
| Psp124BI | GAGCTC | 1 cut(s) | 484 |
| Psp1406I | AACGTT | 1 cut(s) | 2874 |
| Psp5II | RGGWCCY | 4 cut(s) | 13, 91, 917, 2435 |
| Psp6I | CCWGG | 7 cut(s) | 38, 538, 685, 1105, 1930, 2681, 3004 |
| PspFI | CCCAGC | 2 cut(s) | 2596, 2643 |
| PspGI | CCWGG | 7 cut(s) | 38, 538, 685, 1105, 1930, 2681, 3004 |
| PspPI | GGNCC | 7 cut(s) | 13, 36, 91, 749, 917, 1109, 2435 |
| PspPPI | RGGWCCY | 4 cut(s) | 13, 91, 917, 2435 |
| PspXI | VCTCGAGB | 2 cut(s) | 477, 2814 |
| PstI | CTGCAG | 1 cut(s) | 508 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1763 |
| PsuI | RGATCY | 5 cut(s) | 101, 1201, 1492, 2205, 2677 |
| PvuII | CAGCTG | 1 cut(s) | 1728 |
| RsaI | GTAC | 9 cut(s) | 551, 555, 1660, 1936, 1996, 2411, 2623, 2851, 3123 |
| RsaNI | GTAC | 9 cut(s) | 550, 554, 1659, 1935, 1995, 2410, 2622, 2850, 3122 |
| SacI | GAGCTC | 1 cut(s) | 484 |
| SacII | CCGCGG | 1 cut(s) | 3057 |
| SatI | GCNGC | 9 cut(s) | 120, 212, 215, 1541, 1729, 2110, 2820, 3251, 3254 |
| Sau96I | GGNCC | 7 cut(s) | 13, 36, 91, 749, 917, 1109, 2435 |
| ScaI | AGTACT | 1 cut(s) | 2411 |
| SchI | GAGTC | 4 cut(s) | 214, 311, 2093, 3170 |
| ScrFI | CCNGG | 9 cut(s) | 40, 540, 687, 746, 747, 1107, 1932, 2683, 3006 |
| SduI | GDGCHC | 6 cut(s) | 371, 478, 484, 1969, 2553, 2734 |
| SexAI | ACCWGGT | 1 cut(s) | 1930 |
| SfcI | CTRYAG | 2 cut(s) | 504, 2958 |
| Sfr274I | CTCGAG | 2 cut(s) | 477, 2814 |
| Sfr303I | CCGCGG | 1 cut(s) | 3057 |
| SfuI | TTCGAA | 1 cut(s) | 1466 |
| SgrBI | CCGCGG | 1 cut(s) | 3057 |
| SinI | GGWCC | 6 cut(s) | 13, 36, 91, 749, 917, 2435 |
| SlaI | CTCGAG | 2 cut(s) | 477, 2814 |
| SmaI | CCCGGG | 1 cut(s) | 747 |
| SmlI | CTYRAG | 5 cut(s) | 430, 477, 671, 2740, 2814 |
| SmoI | CTYRAG | 5 cut(s) | 430, 477, 671, 2740, 2814 |
| SnaBI | TACGTA | 1 cut(s) | 553 |
| SphI | GCATGC | 1 cut(s) | 1877 |
| SspI | AATATT | 1 cut(s) | 3268 |
| SspMI | CTAG | 5 cut(s) | 237, 1971, 2118, 3125, 3165 |
| SstI | GAGCTC | 1 cut(s) | 484 |
| StyD4I | CCNGG | 9 cut(s) | 38, 538, 685, 744, 745, 1105, 1930, 2681, 3004 |
| StyI | CCWWGG | 3 cut(s) | 265, 1970, 2978 |
| TaiI | ACGT | 5 cut(s) | 555, 787, 839, 2371, 2877 |
| TaqI | TCGA | 9 cut(s) | 82, 478, 495, 569, 1466, 1820, 2815, 3112, 3236 |
| TatI | WGTACW | 3 cut(s) | 1994, 2409, 3121 |
| TfiI | GAWTC | 7 cut(s) | 292, 514, 577, 1553, 2189, 3020, 3218 |
| TseFI | GTSAC | 6 cut(s) | 740, 887, 1892, 2006, 2050, 2096 |
| TseI | GCWGC | 9 cut(s) | 119, 211, 214, 1540, 1728, 2109, 2819, 3250, 3253 |
| Tsp45I | GTSAC | 6 cut(s) | 740, 887, 1892, 2006, 2050, 2096 |
| TspMI | CCCGGG | 1 cut(s) | 745 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 940 |
| VneI | GTGCAC | 1 cut(s) | 2730 |
| VpaK11BI | GGWCC | 6 cut(s) | 13, 36, 91, 749, 917, 2435 |
| XapI | RAATTY | 3 cut(s) | 345, 2225, 2329 |
| XbaI | TCTAGA | 1 cut(s) | 236 |
| XceI | RCATGY | 8 cut(s) | 502, 1155, 1230, 1623, 1793, 1877, 1962, 1995 |
| XhoI | CTCGAG | 2 cut(s) | 477, 2814 |
| XmaI | CCCGGG | 1 cut(s) | 745 |
| XmaJI | CCTAGG | 1 cut(s) | 1970 |
| XmiI | GTMKAC | 2 cut(s) | 2670, 2957 |
| XspI | CTAG | 5 cut(s) | 237, 1971, 2118, 3125, 3165 |
| ZraI | GACGTC | 1 cut(s) | 837 |
| ZrmI | AGTACT | 1 cut(s) | 2411 |
| Zsp2I | ATGCAT | 3 cut(s) | 383, 1875, 2791 |