NF-X1-type zinc finger protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G10170 AT1G10170 AT1G10170 AT1G10170 |
| fragaria_vesca | FvH4_5g17660 |
| malus_domestica | MD06G1232100.v1.1 MD14G1238900.v1.1 |
| prunus_persica | Prupe.5G236400_v2.0.a1 |
| pyrus_communis | pycom06g20620 pycom14g19990 |
| rosa_chinensis | RchiOBHm_Chr7g0178011 |
| rosa_laevigata | RLG00000005482 |
| rosa_multiflora | Rmu_sc0013399.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00275290 |
| rosa_rugosa | Rorug06G0412300 |
| rosa_samantha | Rh7AG011800 Rh7BG011200 Rh7CG011800 Rh7DG011800 |
| rosa_wichuraiana | Rw7G000930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 3113 |
| AccB1I | GGYRCC | 5 cut(s) | 250, 478, 1920, 2185, 3113 |
| AccBSI | CCGCTC | 2 cut(s) | 1393, 2752 |
| AccI | GTMKAC | 1 cut(s) | 3162 |
| AccII | CGCG | 1 cut(s) | 3281 |
| AcoI | YGGCCR | 3 cut(s) | 746, 2062, 2563 |
| AcsI | RAATTY | 4 cut(s) | 837, 1587, 1874, 2794 |
| AcuI | CTGAAG | 6 cut(s) | 357, 2990, 3366, 3464, 3726, 3801 |
| AcyI | GRCGYC | 1 cut(s) | 1378 |
| AfaI | GTAC | 6 cut(s) | 1047, 2488, 2664, 3115, 3343, 3600 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 305, 561, 1111, 1183, 1184, 1741, 1792, 2182, 3094 |
| AflIII | ACRYGT | 7 cut(s) | 1077, 2105, 2281, 2381, 2483, 2758, 3279 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2285 |
| AjnI | CCWGG | 8 cut(s) | 224, 728, 1030, 1177, 1237, 1597, 3092, 3173 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 527, 559 |
| AleI | CACNNNNGTG | 2 cut(s) | 1386, 3122 |
| Alw21I | GWGCWC | 4 cut(s) | 976, 1749, 2000, 2461 |
| Alw26I | GTCTC | 2 cut(s) | 2226, 2813 |
| Alw44I | GTGCAC | 1 cut(s) | 1745 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2255 |
| Ama87I | CYCGRG | 3 cut(s) | 969, 1163, 3306 |
| AoxI | GGCC | 8 cut(s) | 30, 349, 526, 746, 1600, 2062, 2563, 2938 |
| ApaLI | GTGCAC | 1 cut(s) | 1745 |
| ApoI | RAATTY | 4 cut(s) | 837, 1587, 1874, 2794 |
| Asp718I | GGTACC | 1 cut(s) | 3113 |
| AspA2I | CCTAGG | 1 cut(s) | 2462 |
| AsuC2I | CCSGG | 1 cut(s) | 2945 |
| AvaI | CYCGRG | 3 cut(s) | 969, 1163, 3306 |
| AvaII | GGWCC | 9 cut(s) | 178, 222, 915, 1174, 1241, 1409, 2287, 2848, 2947 |
| AvrII | CCTAGG | 1 cut(s) | 2462 |
| AxyI | CCTNAGG | 1 cut(s) | 2291 |
| BaeGI | GKGCMC | 3 cut(s) | 255, 863, 1749 |
| BalI | TGGCCA | 1 cut(s) | 2064 |
| BamHI | GGATCC | 4 cut(s) | 260, 1693, 1984, 3169 |
| BanI | GGYRCC | 5 cut(s) | 250, 478, 1920, 2185, 3113 |
| BanII | GRGCYC | 4 cut(s) | 970, 976, 2461, 3045 |
| BbsI | GAAGAC | 1 cut(s) | 3474 |
| Bbv12I | GWGCWC | 4 cut(s) | 976, 1749, 2000, 2461 |
| BbvCI | CCTCAGC | 1 cut(s) | 2190 |
| BccI | CCATC | 6 cut(s) | 317, 551, 790, 951, 1514, 2170 |
| BceAI | ACGGC | 1 cut(s) | 272 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3717, 3751 |
| BciT130I | CCWGG | 8 cut(s) | 226, 730, 1032, 1179, 1239, 1599, 3094, 3175 |
| BciVI | GTATCC | 1 cut(s) | 3646 |
| BclI | TGATCA | 1 cut(s) | 3151 |
| BcnI | CCSGG | 1 cut(s) | 2945 |
| BcoDI | GTCTC | 2 cut(s) | 2226, 2813 |
| BfaI | CTAG | 7 cut(s) | 813, 1542, 2463, 2610, 3204, 3257, 3602 |
| BfmI | CTRYAG | 5 cut(s) | 538, 996, 1927, 2256, 3531 |
| BfuI | GTATCC | 1 cut(s) | 3646 |
| BglII | AGATCT | 1 cut(s) | 3196 |
| BlnI | CCTAGG | 1 cut(s) | 2462 |
| BlpI | GCTNAGC | 2 cut(s) | 237, 1559 |
| Bme1390I | CCNGG | 9 cut(s) | 226, 730, 1032, 1179, 1239, 1599, 2945, 3094, 3175 |
| Bme18I | GGWCC | 9 cut(s) | 178, 222, 915, 1174, 1241, 1409, 2287, 2848, 2947 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2285 |
| BmeT110I | CYCGRG | 3 cut(s) | 969, 1163, 3306 |
| BmrFI | CCNGG | 9 cut(s) | 226, 730, 1032, 1179, 1239, 1599, 2945, 3094, 3175 |
| BmrI | ACTGGG | 1 cut(s) | 3805 |
| BmuI | ACTGGG | 1 cut(s) | 3805 |
| BpiI | GAAGAC | 1 cut(s) | 3474 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2393, 2425 |
| BpmI | CTGGAG | 3 cut(s) | 1487, 3126, 3613 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2190 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 237, 1559 |
| BpuEI | CTTGAG | 2 cut(s) | 907, 3253 |
| BpuMI | CCSGG | 1 cut(s) | 2945 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1983 |
| BsaHI | GRCGYC | 1 cut(s) | 1378 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 130, 160, 769, 799 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 305, 561, 1111, 1183, 1184, 1741, 1792, 2182, 3094 |
| Bse118I | RCCGGY | 2 cut(s) | 351, 2423 |
| Bse1I | ACTGG | 6 cut(s) | 529, 1750, 1777, 2660, 2675, 3800 |
| Bse21I | CCTNAGG | 1 cut(s) | 2291 |
| Bse3DI | GCAATG | 4 cut(s) | 6, 2138, 2360, 3327 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1983 |
| BseBI | CCWGG | 8 cut(s) | 226, 730, 1032, 1179, 1239, 1599, 3094, 3175 |
| BseGI | GGATG | 7 cut(s) | 551, 801, 1040, 1204, 1594, 2806, 3131 |
| BseJI | GATNNNNATC | 1 cut(s) | 1983 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 305, 561, 1111, 1183, 1184, 1741, 1792, 2182, 3094 |
| BseMI | GCAATG | 4 cut(s) | 6, 2138, 2360, 3327 |
| BseMII | CTCAG | 7 cut(s) | 188, 251, 498, 1332, 2204, 2305, 2826 |
| BseNI | ACTGG | 6 cut(s) | 529, 1750, 1777, 2660, 2675, 3800 |
| BseSI | GKGCMC | 3 cut(s) | 255, 863, 1749 |
| BseYI | CCCAGC | 4 cut(s) | 246, 3036, 3088, 3135 |
| BsgI | GTGCAG | 4 cut(s) | 390, 888, 2475, 3560 |
| Bsh1236I | CGCG | 1 cut(s) | 3281 |
| BshFI | GGCC | 8 cut(s) | 32, 351, 528, 748, 1602, 2064, 2565, 2940 |
| BshNI | GGYRCC | 5 cut(s) | 250, 478, 1920, 2185, 3113 |
| BsiHKAI | GWGCWC | 4 cut(s) | 976, 1749, 2000, 2461 |
| BsiHKCI | CYCGRG | 3 cut(s) | 969, 1163, 3306 |
| BsiSI | CCGG | 4 cut(s) | 352, 2424, 2566, 2944 |
| BslFI | GGGAC | 4 cut(s) | 522, 1160, 2330, 3071 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 305, 561, 1111, 1183, 1184, 1741, 1792, 2182, 3094 |
| BsmAI | GTCTC | 2 cut(s) | 2226, 2813 |
| BsmFI | GGGAC | 4 cut(s) | 522, 1160, 2330, 3071 |
| BsmI | GAATGC | 2 cut(s) | 1262, 2035 |
| BsnI | GGCC | 8 cut(s) | 32, 351, 528, 748, 1602, 2064, 2565, 2940 |
| BsoBI | CYCGRG | 3 cut(s) | 969, 1163, 3306 |
| Bsp1286I | GDGCHC | 8 cut(s) | 255, 863, 970, 976, 1749, 2000, 2461, 3045 |
| Bsp1407I | TGTACA | 1 cut(s) | 1045 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 237, 1559 |
| Bsp19I | CCATGG | 1 cut(s) | 3687 |
| BspANI | GGCC | 8 cut(s) | 32, 351, 528, 748, 1602, 2064, 2565, 2940 |
| BspCNI | CTCAG | 7 cut(s) | 187, 250, 497, 1331, 2203, 2304, 2827 |
| BspFNI | CGCG | 1 cut(s) | 3281 |
| BspMAI | CTGCAG | 3 cut(s) | 1000, 1931, 3535 |
| BspQI | GCTCTTC | 1 cut(s) | 2912 |
| BspT107I | GGYRCC | 5 cut(s) | 250, 478, 1920, 2185, 3113 |
| BsrBI | CCGCTC | 2 cut(s) | 1393, 2752 |
| BsrDI | GCAATG | 4 cut(s) | 6, 2138, 2360, 3327 |
| BsrFI | RCCGGY | 2 cut(s) | 351, 2423 |
| BsrGI | TGTACA | 1 cut(s) | 1045 |
| BsrI | ACTGG | 6 cut(s) | 529, 1750, 1777, 2660, 2675, 3800 |
| BssAI | RCCGGY | 2 cut(s) | 351, 2423 |
| BssNI | GRCGYC | 1 cut(s) | 1378 |
| BssT1I | CCWWGG | 3 cut(s) | 2462, 3420, 3687 |
| Bst2UI | CCWGG | 8 cut(s) | 226, 730, 1032, 1179, 1239, 1599, 3094, 3175 |
| Bst6I | CTCTTC | 2 cut(s) | 2912, 3507 |
| BstACI | GRCGYC | 1 cut(s) | 1378 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 829 |
| BstAUI | TGTACA | 1 cut(s) | 1045 |
| BstDSI | CCRYGG | 3 cut(s) | 1274, 1628, 3687 |
| BstF5I | GGATG | 7 cut(s) | 551, 801, 1040, 1204, 1594, 2806, 3131 |
| BstFNI | CGCG | 1 cut(s) | 3281 |
| BstMAI | GTCTC | 2 cut(s) | 2226, 2813 |
| BstNI | CCWGG | 8 cut(s) | 226, 730, 1032, 1179, 1239, 1599, 3094, 3175 |
| BstNSI | RCATGY | 9 cut(s) | 374, 1081, 1647, 2109, 2115, 2285, 2369, 2385, 2487 |
| BstSCI | CCNGG | 9 cut(s) | 224, 728, 1030, 1177, 1237, 1597, 2943, 3092, 3173 |
| BstSFI | CTRYAG | 5 cut(s) | 538, 996, 1927, 2256, 3531 |
| BstSLI | GKGCMC | 3 cut(s) | 255, 863, 1749 |
| BstUI | CGCG | 1 cut(s) | 3281 |
| BstV2I | GAAGAC | 1 cut(s) | 3474 |
| BstX2I | RGATCY | 6 cut(s) | 260, 1693, 1984, 2697, 3169, 3196 |
| BstYI | RGATCY | 6 cut(s) | 260, 1693, 1984, 2697, 3169, 3196 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2291 |
| BsuI | GTATCC | 1 cut(s) | 3646 |
| BsuRI | GGCC | 8 cut(s) | 32, 351, 528, 748, 1602, 2064, 2565, 2940 |
| BtgI | CCRYGG | 3 cut(s) | 1274, 1628, 3687 |
| BtsCI | GGATG | 7 cut(s) | 551, 801, 1040, 1204, 1594, 2806, 3131 |
| BtsI | GCAGTG | 3 cut(s) | 1235, 1588, 1936 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2255 |
| Cfr10I | RCCGGY | 2 cut(s) | 351, 2423 |
| CseI | GACGC | 1 cut(s) | 1367 |
| Csp6I | GTAC | 6 cut(s) | 1046, 2487, 2663, 3114, 3342, 3599 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 967, 1002, 2320, 2355 |
| CviQI | GTAC | 6 cut(s) | 1046, 2487, 2663, 3114, 3342, 3599 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2285 |
| EaeI | YGGCCR | 3 cut(s) | 746, 2062, 2563 |
| Eam1104I | CTCTTC | 2 cut(s) | 2912, 3507 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2285 |
| EarI | CTCTTC | 2 cut(s) | 2912, 3507 |
| Ecl136II | GAGCTC | 2 cut(s) | 974, 2459 |
| Eco130I | CCWWGG | 3 cut(s) | 2462, 3420, 3687 |
| Eco24I | GRGCYC | 4 cut(s) | 970, 976, 2461, 3045 |
| Eco47I | GGWCC | 9 cut(s) | 178, 222, 915, 1174, 1241, 1409, 2287, 2848, 2947 |
| Eco53kI | GAGCTC | 2 cut(s) | 974, 2459 |
| Eco57I | CTGAAG | 6 cut(s) | 357, 2990, 3366, 3464, 3726, 3801 |
| Eco81I | CCTNAGG | 1 cut(s) | 2291 |
| Eco88I | CYCGRG | 3 cut(s) | 969, 1163, 3306 |
| EcoICRI | GAGCTC | 2 cut(s) | 974, 2459 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1174, 1409, 1601 |
| EcoRII | CCWGG | 8 cut(s) | 224, 728, 1030, 1177, 1237, 1597, 3092, 3173 |
| EcoT14I | CCWWGG | 3 cut(s) | 2462, 3420, 3687 |
| EcoT22I | ATGCAT | 2 cut(s) | 2367, 3457 |
| EcoT38I | GRGCYC | 4 cut(s) | 970, 976, 2461, 3045 |
| ErhI | CCWWGG | 3 cut(s) | 2462, 3420, 3687 |
| FaqI | GGGAC | 4 cut(s) | 522, 1160, 2330, 3071 |
| FauI | CCCGC | 3 cut(s) | 283, 303, 2021 |
| FauNDI | CATATG | 1 cut(s) | 1215 |
| FbaI | TGATCA | 1 cut(s) | 3151 |
| FblI | GTMKAC | 1 cut(s) | 3162 |
| FokI | GGATG | 7 cut(s) | 538, 808, 1047, 1211, 1581, 2813, 3118 |
| FriOI | GRGCYC | 4 cut(s) | 970, 976, 2461, 3045 |
| FspBI | CTAG | 7 cut(s) | 813, 1542, 2463, 2610, 3204, 3257, 3602 |
| GsaI | CCCAGC | 4 cut(s) | 250, 3040, 3092, 3139 |
| GsuI | CTGGAG | 3 cut(s) | 1487, 3126, 3613 |
| HaeIII | GGCC | 8 cut(s) | 32, 351, 528, 748, 1602, 2064, 2565, 2940 |
| HapII | CCGG | 4 cut(s) | 352, 2424, 2566, 2944 |
| HgaI | GACGC | 1 cut(s) | 1367 |
| Hin1I | GRCGYC | 1 cut(s) | 1378 |
| HincII | GTYRAC | 1 cut(s) | 1757 |
| HindII | GTYRAC | 1 cut(s) | 1757 |
| HindIII | AAGCTT | 5 cut(s) | 1361, 1556, 1663, 2637, 3014 |
| HpaII | CCGG | 4 cut(s) | 352, 2424, 2566, 2944 |
| HpyCH4IV | ACGT | 1 cut(s) | 2758 |
| HpySE526I | ACGT | 1 cut(s) | 2758 |
| Hsp92I | GRCGYC | 1 cut(s) | 1378 |
| KpnI | GGTACC | 1 cut(s) | 3117 |
| KroI | GCCGGC | 2 cut(s) | 351, 2423 |
| KroNI | GCCGGC | 2 cut(s) | 353, 2425 |
| Ksp22I | TGATCA | 1 cut(s) | 3151 |
| LguI | GCTCTTC | 1 cut(s) | 2912 |
| LmnI | GCTCC | 9 cut(s) | 117, 979, 2178, 2456, 2464, 2749, 3040, 3428, 3571 |
| MaeI | CTAG | 7 cut(s) | 813, 1542, 2463, 2610, 3204, 3257, 3602 |
| MaeII | ACGT | 1 cut(s) | 2758 |
| MaeIII | GTNAC | 9 cut(s) | 605, 1379, 1721, 1801, 2054, 2327, 2384, 2498, 2542 |
| MbiI | CCGCTC | 2 cut(s) | 1393, 2752 |
| MfeI | CAATTG | 3 cut(s) | 1018, 2903, 3570 |
| MflI | RGATCY | 6 cut(s) | 260, 1693, 1984, 2697, 3169, 3196 |
| MhlI | GDGCHC | 8 cut(s) | 255, 863, 970, 976, 1749, 2000, 2461, 3045 |
| MlsI | TGGCCA | 1 cut(s) | 2064 |
| MluI | ACGCGT | 1 cut(s) | 3279 |
| MluNI | TGGCCA | 1 cut(s) | 2064 |
| MlyI | GAGTC | 8 cut(s) | 427, 499, 637, 793, 803, 1723, 3488, 3647 |
| MmeI | TCCRAC | 7 cut(s) | 288, 336, 558, 1727, 2727, 2826, 3312 |
| Mox20I | TGGCCA | 1 cut(s) | 2064 |
| Mph1103I | ATGCAT | 2 cut(s) | 2367, 3457 |
| MroNI | GCCGGC | 2 cut(s) | 351, 2423 |
| MscI | TGGCCA | 1 cut(s) | 2064 |
| MseI | TTAA | 8 cut(s) | 1622, 1797, 2021, 2322, 2616, 3108, 3584, 3680 |
| Msp20I | TGGCCA | 1 cut(s) | 2064 |
| MspA1I | CMGCKG | 6 cut(s) | 284, 1386, 1926, 2220, 3386, 3591 |
| MspI | CCGG | 4 cut(s) | 352, 2424, 2566, 2944 |
| MspR9I | CCNGG | 9 cut(s) | 226, 730, 1032, 1179, 1239, 1599, 2945, 3094, 3175 |
| MunI | CAATTG | 3 cut(s) | 1018, 2903, 3570 |
| Mva1269I | GAATGC | 2 cut(s) | 1262, 2035 |
| MvaI | CCWGG | 8 cut(s) | 226, 730, 1032, 1179, 1239, 1599, 3094, 3175 |
| MvnI | CGCG | 1 cut(s) | 3281 |
| NaeI | GCCGGC | 2 cut(s) | 353, 2425 |
| NciI | CCSGG | 1 cut(s) | 2945 |
| NcoI | CCATGG | 1 cut(s) | 3687 |
| NdeI | CATATG | 1 cut(s) | 1215 |
| NgoMIV | GCCGGC | 2 cut(s) | 351, 2423 |
| NmeAIII | GCCGAG | 1 cut(s) | 58 |
| NmuCI | GTSAC | 7 cut(s) | 605, 1379, 1721, 2054, 2384, 2498, 2542 |
| NsiI | ATGCAT | 2 cut(s) | 2367, 3457 |
| NspI | RCATGY | 9 cut(s) | 374, 1081, 1647, 2109, 2115, 2285, 2369, 2385, 2487 |
| OliI | CACNNNNGTG | 2 cut(s) | 1386, 3122 |
| PaeI | GCATGC | 1 cut(s) | 2369 |
| PaeR7I | CTCGAG | 3 cut(s) | 969, 1163, 3306 |
| PciI | ACATGT | 5 cut(s) | 1077, 2105, 2281, 2381, 2483 |
| PciSI | GCTCTTC | 1 cut(s) | 2912 |
| PctI | GAATGC | 2 cut(s) | 1262, 2035 |
| PdiI | GCCGGC | 2 cut(s) | 353, 2425 |
| PfoI | TCCNGGA | 2 cut(s) | 224, 1030 |
| PleI | GAGTC | 8 cut(s) | 426, 498, 636, 792, 803, 1723, 3487, 3647 |
| PpsI | GAGTC | 8 cut(s) | 426, 498, 636, 792, 803, 1723, 3487, 3647 |
| PpuMI | RGGWCCY | 2 cut(s) | 1174, 1409 |
| PscI | ACATGT | 5 cut(s) | 1077, 2105, 2281, 2381, 2483 |
| Psp124BI | GAGCTC | 2 cut(s) | 976, 2461 |
| Psp5II | RGGWCCY | 2 cut(s) | 1174, 1409 |
| Psp6I | CCWGG | 8 cut(s) | 224, 728, 1030, 1177, 1237, 1597, 3092, 3173 |
| PspFI | CCCAGC | 4 cut(s) | 246, 3036, 3088, 3135 |
| PspGI | CCWGG | 8 cut(s) | 224, 728, 1030, 1177, 1237, 1597, 3092, 3173 |
| PspPPI | RGGWCCY | 2 cut(s) | 1174, 1409 |
| PspXI | VCTCGAGB | 2 cut(s) | 969, 3306 |
| PstI | CTGCAG | 3 cut(s) | 1000, 1931, 3535 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2255 |
| PsuI | RGATCY | 6 cut(s) | 260, 1693, 1984, 2697, 3169, 3196 |
| PvuII | CAGCTG | 2 cut(s) | 2220, 3386 |
| RsaI | GTAC | 6 cut(s) | 1047, 2488, 2664, 3115, 3343, 3600 |
| RsaNI | GTAC | 6 cut(s) | 1046, 2487, 2663, 3114, 3342, 3599 |
| SacI | GAGCTC | 2 cut(s) | 976, 2461 |
| SapI | GCTCTTC | 1 cut(s) | 2912 |
| SaqAI | TTAA | 8 cut(s) | 1622, 1797, 2021, 2322, 2616, 3108, 3584, 3680 |
| SchI | GAGTC | 8 cut(s) | 427, 499, 637, 793, 803, 1723, 3488, 3647 |
| ScrFI | CCNGG | 9 cut(s) | 226, 730, 1032, 1179, 1239, 1599, 2945, 3094, 3175 |
| SduI | GDGCHC | 8 cut(s) | 255, 863, 970, 976, 1749, 2000, 2461, 3045 |
| SfcI | CTRYAG | 5 cut(s) | 538, 996, 1927, 2256, 3531 |
| Sfr274I | CTCGAG | 3 cut(s) | 969, 1163, 3306 |
| SinI | GGWCC | 9 cut(s) | 178, 222, 915, 1174, 1241, 1409, 2287, 2848, 2947 |
| SlaI | CTCGAG | 3 cut(s) | 969, 1163, 3306 |
| SmlI | CTYRAG | 5 cut(s) | 922, 969, 1163, 3232, 3306 |
| SmoI | CTYRAG | 5 cut(s) | 922, 969, 1163, 3232, 3306 |
| SphI | GCATGC | 1 cut(s) | 2369 |
| SspMI | CTAG | 7 cut(s) | 813, 1542, 2463, 2610, 3204, 3257, 3602 |
| SstI | GAGCTC | 2 cut(s) | 976, 2461 |
| StyD4I | CCNGG | 9 cut(s) | 224, 728, 1030, 1177, 1237, 1597, 2943, 3092, 3173 |
| StyI | CCWWGG | 3 cut(s) | 2462, 3420, 3687 |
| TaiI | ACGT | 1 cut(s) | 2761 |
| TaqI | TCGA | 7 cut(s) | 935, 970, 983, 1164, 2312, 3307, 3737 |
| TatI | WGTACW | 3 cut(s) | 1045, 2486, 3598 |
| TauI | GCSGC | 7 cut(s) | 281, 284, 479, 823, 2376, 3380, 3578 |
| Tru1I | TTAA | 8 cut(s) | 1622, 1797, 2021, 2322, 2616, 3108, 3584, 3680 |
| Tru9I | TTAA | 8 cut(s) | 1622, 1797, 2021, 2322, 2616, 3108, 3584, 3680 |
| TseFI | GTSAC | 7 cut(s) | 605, 1379, 1721, 2054, 2384, 2498, 2542 |
| Tsp45I | GTSAC | 7 cut(s) | 605, 1379, 1721, 2054, 2384, 2498, 2542 |
| TspDTI | ATGAA | 9 cut(s) | 39, 767, 818, 1125, 2196, 2748, 3053, 3489, 3708 |
| TspGWI | ACGGA | 2 cut(s) | 1645, 1915 |
| VneI | GTGCAC | 1 cut(s) | 1745 |
| VpaK11BI | GGWCC | 9 cut(s) | 178, 222, 915, 1174, 1241, 1409, 2287, 2848, 2947 |
| XapI | RAATTY | 4 cut(s) | 837, 1587, 1874, 2794 |
| XceI | RCATGY | 9 cut(s) | 374, 1081, 1647, 2109, 2115, 2285, 2369, 2385, 2487 |
| XhoI | CTCGAG | 3 cut(s) | 969, 1163, 3306 |
| XmaJI | CCTAGG | 1 cut(s) | 2462 |
| XmiI | GTMKAC | 1 cut(s) | 3162 |
| XspI | CTAG | 7 cut(s) | 813, 1542, 2463, 2610, 3204, 3257, 3602 |
| Zsp2I | ATGCAT | 2 cut(s) | 2367, 3457 |