NF-X1-type zinc finger protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G10170 AT1G10170 AT1G10170 AT1G10170 |
| fragaria_vesca | FvH4_5g17660 |
| malus_domestica | MD06G1232100.v1.1 MD14G1238900.v1.1 |
| prunus_persica | Prupe.5G236400_v2.0.a1 |
| pyrus_communis | pycom06g20620 pycom14g19990 |
| rosa_chinensis | RchiOBHm_Chr7g0178011 |
| rosa_laevigata | RLG00000005482 |
| rosa_multiflora | Rmu_sc0013399.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00275290 |
| rosa_rugosa | Rorug06G0412300 |
| rosa_samantha | Rh7AG011800 Rh7BG011200 Rh7CG011800 Rh7DG011800 |
| rosa_wichuraiana | Rw7G000930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 3165 |
| Acc65I | GGTACC | 2 cut(s) | 781, 1757 |
| AccB1I | GGYRCC | 5 cut(s) | 94, 781, 1757, 1858, 2063 |
| AccBSI | CCGCTC | 3 cut(s) | 62, 1000, 2311 |
| AccI | GTMKAC | 1 cut(s) | 2769 |
| AccII | CGCG | 1 cut(s) | 3100 |
| AcoI | YGGCCR | 4 cut(s) | 311, 353, 1669, 2170 |
| AcsI | RAATTY | 4 cut(s) | 421, 444, 1481, 3307 |
| AcuI | CTGAAG | 3 cut(s) | 702, 3045, 3414 |
| AcvI | CACGTG | 1 cut(s) | 1152 |
| AcyI | GRCGYC | 1 cut(s) | 985 |
| AfaI | GTAC | 8 cut(s) | 654, 783, 1759, 2095, 2510, 2722, 3192, 3225 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 320, 370, 791, 1381, 1725, 2643, 2700, 3114, 3311 |
| AflIII | ACRYGT | 4 cut(s) | 597, 1151, 2090, 3174 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 951 |
| AjiI | CACGTC | 1 cut(s) | 2468 |
| AjnI | CCWGG | 7 cut(s) | 38, 249, 637, 844, 1204, 2780, 3266 |
| AleI | CACNNNNGTG | 2 cut(s) | 825, 993 |
| Alw21I | GWGCWC | 4 cut(s) | 583, 2520, 2740, 2833 |
| Alw26I | GTCTC | 4 cut(s) | 1086, 1341, 1833, 2552 |
| Alw44I | GTGCAC | 2 cut(s) | 2736, 2829 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2186, 2924 |
| Ama87I | CYCGRG | 3 cut(s) | 576, 770, 2913 |
| AoxI | GGCC | 6 cut(s) | 311, 353, 1208, 1669, 2170, 2226 |
| ApaLI | GTGCAC | 2 cut(s) | 2736, 2829 |
| ApoI | RAATTY | 4 cut(s) | 421, 444, 1481, 3307 |
| Asp718I | GGTACC | 2 cut(s) | 781, 1757 |
| AspA2I | CCTAGG | 1 cut(s) | 2069 |
| AspLEI | GCGC | 3 cut(s) | 2951, 2966, 3166 |
| AsuC2I | CCSGG | 1 cut(s) | 786 |
| AsuHPI | GGTGA | 9 cut(s) | 169, 370, 511, 980, 1126, 1985, 2099, 2435, 3143 |
| AvaI | CYCGRG | 3 cut(s) | 576, 770, 2913 |
| AvaII | GGWCC | 9 cut(s) | 36, 522, 709, 848, 1016, 1705, 1894, 2455, 3299 |
| AvrII | CCTAGG | 1 cut(s) | 2069 |
| AxyI | CCTNAGG | 1 cut(s) | 1898 |
| BaeGI | GKGCMC | 4 cut(s) | 470, 2068, 2740, 2833 |
| BalI | TGGCCA | 1 cut(s) | 1671 |
| BamHI | GGATCC | 4 cut(s) | 104, 1300, 1591, 2776 |
| BanI | GGYRCC | 5 cut(s) | 94, 781, 1757, 1858, 2063 |
| BanII | GRGCYC | 4 cut(s) | 577, 583, 2652, 3251 |
| BbrPI | CACGTG | 1 cut(s) | 1152 |
| BbsI | GAAGAC | 3 cut(s) | 1531, 1958, 3051 |
| Bbv12I | GWGCWC | 4 cut(s) | 583, 2520, 2740, 2833 |
| BbvCI | CCTCAGC | 2 cut(s) | 1797, 3068 |
| BccI | CCATC | 9 cut(s) | 159, 285, 307, 558, 1121, 1209, 2347, 2610, 3210 |
| BceAI | ACGGC | 3 cut(s) | 116, 1768, 3255 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 584, 618, 2867, 2901, 3318, 3352 |
| BciT130I | CCWGG | 7 cut(s) | 40, 251, 639, 846, 1206, 2782, 3268 |
| BciVI | GTATCC | 1 cut(s) | 2697 |
| BcnI | CCSGG | 1 cut(s) | 786 |
| BcoDI | GTCTC | 4 cut(s) | 1086, 1341, 1833, 2552 |
| BfaI | CTAG | 5 cut(s) | 2070, 2217, 2811, 3227, 3282 |
| BfmI | CTRYAG | 2 cut(s) | 2967, 3156 |
| BfoI | RGCGCY | 1 cut(s) | 2967 |
| BfuI | GTATCC | 1 cut(s) | 2697 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 1504, 1807 |
| BglII | AGATCT | 1 cut(s) | 2803 |
| BlnI | CCTAGG | 1 cut(s) | 2069 |
| BlpI | GCTNAGC | 4 cut(s) | 51, 63, 1166, 2020 |
| BmcAI | AGTACT | 1 cut(s) | 2510 |
| Bme1390I | CCNGG | 8 cut(s) | 40, 251, 639, 786, 846, 1206, 2782, 3268 |
| Bme18I | GGWCC | 9 cut(s) | 36, 522, 709, 848, 1016, 1705, 1894, 2455, 3299 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 951 |
| BmeT110I | CYCGRG | 3 cut(s) | 576, 770, 2913 |
| BmgBI | CACGTC | 1 cut(s) | 2468 |
| BmrFI | CCNGG | 8 cut(s) | 40, 251, 639, 786, 846, 1206, 2782, 3268 |
| BmrI | ACTGGG | 3 cut(s) | 1389, 3041, 3415 |
| BmuI | ACTGGG | 3 cut(s) | 1389, 3041, 3415 |
| BpiI | GAAGAC | 3 cut(s) | 1531, 1958, 3051 |
| BpmI | CTGGAG | 1 cut(s) | 2733 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1797, 3042, 3068 |
| Bpu1102I | GCTNAGC | 4 cut(s) | 51, 63, 1166, 2020 |
| BpuEI | CTTGAG | 2 cut(s) | 514, 2534 |
| BpuMI | CCSGG | 1 cut(s) | 786 |
| Bsa29I | ATCGAT | 1 cut(s) | 3214 |
| BsaAI | YACGTR | 1 cut(s) | 1152 |
| BsaBI | GATNNNNATC | 2 cut(s) | 646, 1590 |
| BsaHI | GRCGYC | 1 cut(s) | 985 |
| BsaI | GGTCTC | 1 cut(s) | 2552 |
| BsaJI | CCNNGG | 7 cut(s) | 844, 1205, 2069, 2780, 3080, 3266, 3267 |
| BsaWI | WCCGGW | 1 cut(s) | 3107 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 665, 695, 2846, 2876 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 320, 370, 791, 1381, 1725, 2643, 2700, 3114, 3311 |
| Bse118I | RCCGGY | 1 cut(s) | 355 |
| Bse1I | ACTGG | 6 cut(s) | 1357, 1384, 2299, 3036, 3368, 3410 |
| Bse21I | CCTNAGG | 1 cut(s) | 1898 |
| Bse3DI | GCAATG | 6 cut(s) | 117, 178, 274, 1180, 2218, 2934 |
| Bse8I | GATNNNNATC | 2 cut(s) | 646, 1590 |
| BseBI | CCWGG | 7 cut(s) | 40, 251, 639, 846, 1206, 2782, 3268 |
| BseCI | ATCGAT | 1 cut(s) | 3214 |
| BseDI | CCNNGG | 7 cut(s) | 844, 1205, 2069, 2780, 3080, 3266, 3267 |
| BseJI | GATNNNNATC | 2 cut(s) | 646, 1590 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 320, 370, 791, 1381, 1725, 2643, 2700, 3114, 3311 |
| BseMI | GCAATG | 6 cut(s) | 117, 178, 274, 1180, 2218, 2934 |
| BseNI | ACTGG | 6 cut(s) | 1357, 1384, 2299, 3036, 3368, 3410 |
| BseRI | GAGGAG | 8 cut(s) | 336, 413, 517, 1731, 2385, 2510, 2947, 3066 |
| BseSI | GKGCMC | 4 cut(s) | 470, 2068, 2740, 2833 |
| BseX3I | CGGCCG | 1 cut(s) | 353 |
| BseYI | CCCAGC | 4 cut(s) | 180, 429, 2742, 3359 |
| BsgI | GTGCAG | 2 cut(s) | 495, 1555 |
| Bsh1236I | CGCG | 1 cut(s) | 3100 |
| Bsh1285I | CGRYCG | 2 cut(s) | 356, 931 |
| BshFI | GGCC | 6 cut(s) | 313, 355, 1210, 1671, 2172, 2228 |
| BshNI | GGYRCC | 5 cut(s) | 94, 781, 1757, 1858, 2063 |
| BshVI | ATCGAT | 1 cut(s) | 3214 |
| BsiEI | CGRYCG | 2 cut(s) | 356, 931 |
| BsiHKAI | GWGCWC | 4 cut(s) | 583, 2520, 2740, 2833 |
| BsiHKCI | CYCGRG | 3 cut(s) | 576, 770, 2913 |
| BsiSI | CCGG | 4 cut(s) | 356, 785, 2173, 3108 |
| BslFI | GGGAC | 3 cut(s) | 1536, 1937, 3049 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 320, 370, 791, 1381, 1725, 2643, 2700, 3114, 3311 |
| BsmAI | GTCTC | 4 cut(s) | 1086, 1341, 1833, 2552 |
| BsmFI | GGGAC | 3 cut(s) | 1536, 1937, 3049 |
| BsmI | GAATGC | 3 cut(s) | 1457, 1642, 2890 |
| BsnI | GGCC | 6 cut(s) | 313, 355, 1210, 1671, 2172, 2228 |
| Bso31I | GGTCTC | 1 cut(s) | 2552 |
| BsoBI | CYCGRG | 3 cut(s) | 576, 770, 2913 |
| Bsp1286I | GDGCHC | 9 cut(s) | 470, 577, 583, 2068, 2520, 2652, 2740, 2833, 3251 |
| Bsp1407I | TGTACA | 1 cut(s) | 652 |
| Bsp1720I | GCTNAGC | 4 cut(s) | 51, 63, 1166, 2020 |
| BspANI | GGCC | 6 cut(s) | 313, 355, 1210, 1671, 2172, 2228 |
| BspDI | ATCGAT | 1 cut(s) | 3214 |
| BspFNI | CGCG | 1 cut(s) | 3100 |
| BspT107I | GGYRCC | 5 cut(s) | 94, 781, 1757, 1858, 2063 |
| BspTNI | GGTCTC | 1 cut(s) | 2552 |
| BsrBI | CCGCTC | 3 cut(s) | 62, 1000, 2311 |
| BsrDI | GCAATG | 6 cut(s) | 117, 178, 274, 1180, 2218, 2934 |
| BsrFI | RCCGGY | 1 cut(s) | 355 |
| BsrGI | TGTACA | 1 cut(s) | 652 |
| BsrI | ACTGG | 6 cut(s) | 1357, 1384, 2299, 3036, 3368, 3410 |
| BssAI | RCCGGY | 1 cut(s) | 355 |
| BssECI | CCNNGG | 7 cut(s) | 844, 1205, 2069, 2780, 3080, 3266, 3267 |
| BssNI | GRCGYC | 1 cut(s) | 985 |
| BssT1I | CCWWGG | 1 cut(s) | 2069 |
| Bst2UI | CCWGG | 7 cut(s) | 40, 251, 639, 846, 1206, 2782, 3268 |
| Bst6I | CTCTTC | 2 cut(s) | 2579, 3132 |
| BstACI | GRCGYC | 1 cut(s) | 985 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2924 |
| BstAUI | TGTACA | 1 cut(s) | 652 |
| BstBAI | YACGTR | 1 cut(s) | 1152 |
| BstDSI | CCRYGG | 1 cut(s) | 3080 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1723 |
| BstFNI | CGCG | 1 cut(s) | 3100 |
| BstH2I | RGCGCY | 1 cut(s) | 2967 |
| BstHHI | GCGC | 3 cut(s) | 2951, 2966, 3166 |
| BstMAI | GTCTC | 4 cut(s) | 1086, 1341, 1833, 2552 |
| BstMCI | CGRYCG | 2 cut(s) | 356, 931 |
| BstNI | CCWGG | 7 cut(s) | 40, 251, 639, 846, 1206, 2782, 3268 |
| BstNSI | RCATGY | 5 cut(s) | 601, 1254, 1892, 1976, 2094 |
| BstSCI | CCNGG | 8 cut(s) | 38, 249, 637, 784, 844, 1204, 2780, 3266 |
| BstSFI | CTRYAG | 2 cut(s) | 2967, 3156 |
| BstSLI | GKGCMC | 4 cut(s) | 470, 2068, 2740, 2833 |
| BstUI | CGCG | 1 cut(s) | 3100 |
| BstV2I | GAAGAC | 3 cut(s) | 1531, 1958, 3051 |
| BstX2I | RGATCY | 6 cut(s) | 104, 1300, 1591, 2304, 2776, 2803 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2984 |
| BstYI | RGATCY | 6 cut(s) | 104, 1300, 1591, 2304, 2776, 2803 |
| BstZI | CGGCCG | 1 cut(s) | 353 |
| Bsu15I | ATCGAT | 1 cut(s) | 3214 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1898 |
| BsuI | GTATCC | 1 cut(s) | 2697 |
| BsuRI | GGCC | 6 cut(s) | 313, 355, 1210, 1671, 2172, 2228 |
| BsuTUI | ATCGAT | 1 cut(s) | 3214 |
| BtgI | CCRYGG | 1 cut(s) | 3080 |
| BtrI | CACGTC | 1 cut(s) | 2468 |
| BtsI | GCAGTG | 6 cut(s) | 123, 226, 842, 1543, 1672, 1967 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2186, 2924 |
| CfoI | GCGC | 3 cut(s) | 2951, 2966, 3166 |
| Cfr10I | RCCGGY | 1 cut(s) | 355 |
| ClaI | ATCGAT | 1 cut(s) | 3214 |
| CseI | GACGC | 3 cut(s) | 974, 1038, 3045 |
| Csp6I | GTAC | 8 cut(s) | 653, 782, 1758, 2094, 2509, 2721, 3191, 3224 |
| CspCI | CAANNNNNGTGG | 8 cut(s) | 1380, 1415, 1483, 1518, 1927, 1962, 3291, 3326 |
| CviQI | GTAC | 8 cut(s) | 653, 782, 1758, 2094, 2509, 2721, 3191, 3224 |
| DraI | TTTAAA | 1 cut(s) | 1459 |
| DriI | GACNNNNNGTC | 1 cut(s) | 951 |
| EaeI | YGGCCR | 4 cut(s) | 311, 353, 1669, 2170 |
| EagI | CGGCCG | 1 cut(s) | 353 |
| Eam1104I | CTCTTC | 2 cut(s) | 2579, 3132 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 951 |
| EarI | CTCTTC | 2 cut(s) | 2579, 3132 |
| Ecl136II | GAGCTC | 1 cut(s) | 581 |
| EclXI | CGGCCG | 1 cut(s) | 353 |
| Eco130I | CCWWGG | 1 cut(s) | 2069 |
| Eco24I | GRGCYC | 4 cut(s) | 577, 583, 2652, 3251 |
| Eco31I | GGTCTC | 1 cut(s) | 2552 |
| Eco47I | GGWCC | 9 cut(s) | 36, 522, 709, 848, 1016, 1705, 1894, 2455, 3299 |
| Eco52I | CGGCCG | 1 cut(s) | 353 |
| Eco53kI | GAGCTC | 1 cut(s) | 581 |
| Eco57I | CTGAAG | 3 cut(s) | 702, 3045, 3414 |
| Eco72I | CACGTG | 1 cut(s) | 1152 |
| Eco81I | CCTNAGG | 1 cut(s) | 1898 |
| Eco88I | CYCGRG | 3 cut(s) | 576, 770, 2913 |
| EcoICRI | GAGCTC | 1 cut(s) | 581 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1723 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1016 |
| EcoRII | CCWGG | 7 cut(s) | 38, 249, 637, 844, 1204, 2780, 3266 |
| EcoT14I | CCWWGG | 1 cut(s) | 2069 |
| EcoT22I | ATGCAT | 2 cut(s) | 1974, 2890 |
| EcoT38I | GRGCYC | 4 cut(s) | 577, 583, 2652, 3251 |
| ErhI | CCWWGG | 1 cut(s) | 2069 |
| FaqI | GGGAC | 3 cut(s) | 1536, 1937, 3049 |
| FauI | CCCGC | 4 cut(s) | 147, 598, 752, 2316 |
| FblI | GTMKAC | 1 cut(s) | 2769 |
| FriOI | GRGCYC | 4 cut(s) | 577, 583, 2652, 3251 |
| FspBI | CTAG | 5 cut(s) | 2070, 2217, 2811, 3227, 3282 |
| FspI | TGCGCA | 1 cut(s) | 3165 |
| GlaI | GCGC | 3 cut(s) | 2950, 2965, 3165 |
| GsaI | CCCAGC | 4 cut(s) | 184, 433, 2746, 3363 |
| GsuI | CTGGAG | 1 cut(s) | 2733 |
| HaeII | RGCGCY | 1 cut(s) | 2967 |
| HaeIII | GGCC | 6 cut(s) | 313, 355, 1210, 1671, 2172, 2228 |
| HapII | CCGG | 4 cut(s) | 356, 785, 2173, 3108 |
| HgaI | GACGC | 3 cut(s) | 974, 1038, 3045 |
| HhaI | GCGC | 3 cut(s) | 2951, 2966, 3166 |
| Hin1I | GRCGYC | 1 cut(s) | 985 |
| Hin6I | GCGC | 3 cut(s) | 2949, 2964, 3164 |
| HinP1I | GCGC | 3 cut(s) | 2949, 2964, 3164 |
| HincII | GTYRAC | 1 cut(s) | 1434 |
| HindII | GTYRAC | 1 cut(s) | 1434 |
| HindIII | AAGCTT | 5 cut(s) | 968, 1270, 2244, 2324, 2621 |
| HpaII | CCGG | 4 cut(s) | 356, 785, 2173, 3108 |
| HphI | GGTGA | 9 cut(s) | 169, 370, 511, 980, 1126, 1985, 2099, 2435, 3143 |
| Hpy99I | CGWCG | 1 cut(s) | 87 |
| HpyCH4IV | ACGT | 5 cut(s) | 822, 883, 1151, 2467, 3174 |
| HpySE526I | ACGT | 5 cut(s) | 822, 883, 1151, 2467, 3174 |
| Hsp92I | GRCGYC | 1 cut(s) | 985 |
| HspAI | GCGC | 3 cut(s) | 2949, 2964, 3164 |
| KpnI | GGTACC | 2 cut(s) | 785, 1761 |
| LmnI | GCTCC | 4 cut(s) | 586, 2398, 2647, 3053 |
| MaeI | CTAG | 5 cut(s) | 2070, 2217, 2811, 3227, 3282 |
| MaeII | ACGT | 5 cut(s) | 822, 883, 1151, 2467, 3174 |
| MbiI | CCGCTC | 3 cut(s) | 62, 1000, 2311 |
| MfeI | CAATTG | 2 cut(s) | 2283, 3195 |
| MflI | RGATCY | 6 cut(s) | 104, 1300, 1591, 2304, 2776, 2803 |
| MhlI | GDGCHC | 9 cut(s) | 470, 577, 583, 2068, 2520, 2652, 2740, 2833, 3251 |
| MlsI | TGGCCA | 1 cut(s) | 1671 |
| MluNI | TGGCCA | 1 cut(s) | 1671 |
| MlyI | GAGTC | 4 cut(s) | 410, 3113, 3272, 3329 |
| MmeI | TCCRAC | 5 cut(s) | 132, 1334, 2919, 3092, 3352 |
| Mox20I | TGGCCA | 1 cut(s) | 1671 |
| Mph1103I | ATGCAT | 2 cut(s) | 1974, 2890 |
| MscI | TGGCCA | 1 cut(s) | 1671 |
| MseI | TTAA | 7 cut(s) | 624, 1229, 1245, 1458, 1628, 2715, 2840 |
| Msp20I | TGGCCA | 1 cut(s) | 1671 |
| MspA1I | CMGCKG | 4 cut(s) | 993, 1780, 1827, 2639 |
| MspI | CCGG | 4 cut(s) | 356, 785, 2173, 3108 |
| MspR9I | CCNGG | 8 cut(s) | 40, 251, 639, 786, 846, 1206, 2782, 3268 |
| MunI | CAATTG | 2 cut(s) | 2283, 3195 |
| Mva1269I | GAATGC | 3 cut(s) | 1457, 1642, 2890 |
| MvaI | CCWGG | 7 cut(s) | 40, 251, 639, 846, 1206, 2782, 3268 |
| MvnI | CGCG | 1 cut(s) | 3100 |
| NciI | CCSGG | 1 cut(s) | 786 |
| NmeAIII | GCCGAG | 2 cut(s) | 123, 2499 |
| NmuCI | GTSAC | 9 cut(s) | 175, 986, 1408, 1490, 1661, 1991, 2105, 2149, 3233 |
| NsbI | TGCGCA | 1 cut(s) | 3165 |
| NsiI | ATGCAT | 2 cut(s) | 1974, 2890 |
| NspI | RCATGY | 5 cut(s) | 601, 1254, 1892, 1976, 2094 |
| OliI | CACNNNNGTG | 2 cut(s) | 825, 993 |
| PaeI | GCATGC | 1 cut(s) | 1976 |
| PaeR7I | CTCGAG | 3 cut(s) | 576, 770, 2913 |
| PasI | CCCWGGG | 1 cut(s) | 3267 |
| PciI | ACATGT | 2 cut(s) | 597, 2090 |
| PctI | GAATGC | 3 cut(s) | 1457, 1642, 2890 |
| PflFI | GACNNNGTC | 1 cut(s) | 348 |
| PfoI | TCCNGGA | 1 cut(s) | 637 |
| Ple19I | CGATCG | 1 cut(s) | 931 |
| PleI | GAGTC | 4 cut(s) | 410, 3112, 3272, 3328 |
| PmaCI | CACGTG | 1 cut(s) | 1152 |
| PmlI | CACGTG | 1 cut(s) | 1152 |
| PpsI | GAGTC | 4 cut(s) | 410, 3112, 3272, 3328 |
| Ppu21I | YACGTR | 1 cut(s) | 1152 |
| PpuMI | RGGWCCY | 1 cut(s) | 1016 |
| PscI | ACATGT | 2 cut(s) | 597, 2090 |
| Psp124BI | GAGCTC | 1 cut(s) | 583 |
| Psp5II | RGGWCCY | 1 cut(s) | 1016 |
| Psp6I | CCWGG | 7 cut(s) | 38, 249, 637, 844, 1204, 2780, 3266 |
| PspCI | CACGTG | 1 cut(s) | 1152 |
| PspFI | CCCAGC | 4 cut(s) | 180, 429, 2742, 3359 |
| PspGI | CCWGG | 7 cut(s) | 38, 249, 637, 844, 1204, 2780, 3266 |
| PspPPI | RGGWCCY | 1 cut(s) | 1016 |
| PspXI | VCTCGAGB | 2 cut(s) | 576, 2913 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2186, 2924 |
| PsuI | RGATCY | 6 cut(s) | 104, 1300, 1591, 2304, 2776, 2803 |
| PsyI | GACNNNGTC | 1 cut(s) | 348 |
| PvuI | CGATCG | 1 cut(s) | 931 |
| PvuII | CAGCTG | 2 cut(s) | 1780, 1827 |
| RsaI | GTAC | 8 cut(s) | 654, 783, 1759, 2095, 2510, 2722, 3192, 3225 |
| RsaNI | GTAC | 8 cut(s) | 653, 782, 1758, 2094, 2509, 2721, 3191, 3224 |
| SacI | GAGCTC | 1 cut(s) | 583 |
| SaqAI | TTAA | 7 cut(s) | 624, 1229, 1245, 1458, 1628, 2715, 2840 |
| ScaI | AGTACT | 1 cut(s) | 2510 |
| SchI | GAGTC | 4 cut(s) | 410, 3113, 3272, 3329 |
| ScrFI | CCNGG | 8 cut(s) | 40, 251, 639, 786, 846, 1206, 2782, 3268 |
| SduI | GDGCHC | 9 cut(s) | 470, 577, 583, 2068, 2520, 2652, 2740, 2833, 3251 |
| SfcI | CTRYAG | 2 cut(s) | 2967, 3156 |
| Sfr274I | CTCGAG | 3 cut(s) | 576, 770, 2913 |
| SinI | GGWCC | 9 cut(s) | 36, 522, 709, 848, 1016, 1705, 1894, 2455, 3299 |
| SlaI | CTCGAG | 3 cut(s) | 576, 770, 2913 |
| SmlI | CTYRAG | 5 cut(s) | 529, 576, 770, 2549, 2913 |
| SmoI | CTYRAG | 5 cut(s) | 529, 576, 770, 2549, 2913 |
| SphI | GCATGC | 1 cut(s) | 1976 |
| SspMI | CTAG | 5 cut(s) | 2070, 2217, 2811, 3227, 3282 |
| SstI | GAGCTC | 1 cut(s) | 583 |
| StyD4I | CCNGG | 8 cut(s) | 38, 249, 637, 784, 844, 1204, 2780, 3266 |
| StyI | CCWWGG | 1 cut(s) | 2069 |
| TaiI | ACGT | 5 cut(s) | 825, 886, 1154, 2470, 3177 |
| TatI | WGTACW | 4 cut(s) | 652, 2093, 2508, 3223 |
| TauI | GCSGC | 3 cut(s) | 62, 2639, 3005 |
| Tru1I | TTAA | 7 cut(s) | 624, 1229, 1245, 1458, 1628, 2715, 2840 |
| Tru9I | TTAA | 7 cut(s) | 624, 1229, 1245, 1458, 1628, 2715, 2840 |
| TseFI | GTSAC | 9 cut(s) | 175, 986, 1408, 1490, 1661, 1991, 2105, 2149, 3233 |
| Tsp45I | GTSAC | 9 cut(s) | 175, 986, 1408, 1490, 1661, 1991, 2105, 2149, 3233 |
| TspDTI | ATGAA | 9 cut(s) | 732, 1128, 2256, 2355, 2546, 2660, 2784, 3114, 3249 |
| TspGWI | ACGGA | 4 cut(s) | 722, 1718, 2239, 3069 |
| Tth111I | GACNNNGTC | 1 cut(s) | 348 |
| VneI | GTGCAC | 2 cut(s) | 2736, 2829 |
| VpaK11BI | GGWCC | 9 cut(s) | 36, 522, 709, 848, 1016, 1705, 1894, 2455, 3299 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1723 |
| XapI | RAATTY | 4 cut(s) | 421, 444, 1481, 3307 |
| XbaI | TCTAGA | 1 cut(s) | 3281 |
| XceI | RCATGY | 5 cut(s) | 601, 1254, 1892, 1976, 2094 |
| XhoI | CTCGAG | 3 cut(s) | 576, 770, 2913 |
| XmaJI | CCTAGG | 1 cut(s) | 2069 |
| XmiI | GTMKAC | 1 cut(s) | 2769 |
| XspI | CTAG | 5 cut(s) | 2070, 2217, 2811, 3227, 3282 |
| ZrmI | AGTACT | 1 cut(s) | 2510 |
| Zsp2I | ATGCAT | 2 cut(s) | 1974, 2890 |