Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0009944

Physical Location & Seq

Genomic Coordinates Reverse (-)

958274 .. 959968

Gene Structure 1695 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G013700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 999 bp

ATGACAAGGTCATCGATTACTTTTAGTCGTCGTTACTCTTTGTTAATGATCATGTTTTTCGCGTTGTGTCTGGTTGCGAAGGCACAGTTAAGTACAGATTTCTACAAGGCAACATGTCCTGATCTTCTCAAAATTGTCCGGAGAGAGGTTCTGAATGCAATCAAGACTGAAATGCGAATGGCTGCTTCTTTGCTTCGGCTACACTTCCATGACTGCTTTGTCAATGGTTGTGATGCATCGCTACTACTGGATGTAACTGACAGTGAGAAGGCTGCCTTGCCCAATTTGAACTCAGCAAGAGGATTTGAAGTTGTGGACAGAATCAAGAGCTCTGTGGAGAGTGCATGCAGTGGAGTTGTATCGTGTGCTGATATACTAGCCATAGCTGCCAGAGACTCTGTGGTCCTAAGTGGAGGAACTCCATGGAAAGTTCTACTGGGAAGAAGAGATGGATTGGTGGCAAATCAAACAGGAGCAAATAATGGACTTCCTTCTCCATTTGAAACTCTGGATGTGATCATTTCCAAGTTTGCCACTGTAGGCCTCGATGTCAAAGATGTTGTGTCCTTATCAGGAGGTCATACAATTGGGTTGGCAAAGTGCAGCACTTTCAGCAACAGGCTTTTCAACTTCTCAGGAACAGGTAGTCCAGACAGCACATTGGATCAAAGCATGTTAACTGATCTACAAAACTTGTGTCCACTCACTGGTGATGGAAGCAACACCGCGCCGTTTGATCGAAACTCAGCCGATCTTTTTGACAACCATTACTTTCAGAACTTGATTAATGGAAAGGGCCTTCTTGGTTCTGATCAAATTCTGTTTTCCAGTGATGCAGCTGTGACAACAAACACCAAAAGTTTGGTCCTAAGCTATAGCTCTAATTCTAGGCTTTTCCTCAGTGATTTTGCTGATTCTATGGTCAAGATGGGGAATATAAGTCCTCTTACTGGGTCTGCTGGAGAGATCAGAAAGAACTGCCGGCTGGTTAATTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

333

Amino Acids

35.66

Weight (kDa)

6.88

Isoelectric Point (pI)

35.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009944)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19890
fragaria_vesca	FvH4_3g44351
malus_domestica	MD03G1014500.v1.1 MD11G1015400.v1.1
prunus_persica	Prupe.6G013700_v2.0.a1 Prupe.6G013800_v2.0.a1
pyrus_communis	pycom03g01190 pycom11g01090
rosa_chinensis	RchiOBHm_Chr5g0080741
rosa_laevigata	RLG00000012515 RLG00000036890
rosa_multiflora	Rmu_sc0003177.1_g000002 Rmu_sc0003177.1_g000006
rosa_roxburghii	Rroxscaffold_1G00002690
rosa_rugosa	Rorug05G0471700
rosa_samantha	Rh5AG525300 Rh5BG547700 Rh5CG571200 Rh5DG557600 Rh5DG558900
rosa_wichuraiana	Rw5G049290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	218, 401
AccB7I	CCANNNNNTGG	1 cut(s)	707
AccII	CGCG	2 cut(s)	62, 728
AccIII	TCCGGA	1 cut(s)	138
AciI	CCGC	1 cut(s)	726
AclWI	GGATC	1 cut(s)	672
AcsI	RAATTY	1 cut(s)	816
AfaI	GTAC	1 cut(s)	94
AfiI	CCNNNNNNNGG	3 cut(s)	145, 707, 950
AflIII	ACRYGT	1 cut(s)	113
AgsI	TTSAA	4 cut(s)	289, 308, 503, 628
AloI	GAACNNNNNNTCC	2 cut(s)	631, 663
AluBI	AGCT	5 cut(s)	330, 386, 839, 873, 879
AluI	AGCT	5 cut(s)	330, 386, 839, 873, 879
Alw21I	GWGCWC	1 cut(s)	332
Alw26I	GTCTC	1 cut(s)	387
AlwI	GGATC	1 cut(s)	672
Aor13HI	TCCGGA	1 cut(s)	138
AoxI	GGCC	2 cut(s)	541, 796
ApeKI	GCWGC	5 cut(s)	182, 272, 386, 603, 836
ApoI	RAATTY	1 cut(s)	816
ArsI	GACNNNNNNTTYG	4 cut(s)	682, 714, 849, 881
AseI	ATTAAT	1 cut(s)	786
AspLEI	GCGC	1 cut(s)	730
AspS9I	GGNCC	3 cut(s)	403, 796, 865
AsuHPI	GGTGA	1 cut(s)	722
AvaII	GGWCC	2 cut(s)	403, 865
BanII	GRGCYC	1 cut(s)	332
Bbv12I	GWGCWC	1 cut(s)	332
BbvI	GCAGC	5 cut(s)	169, 259, 373, 615, 848
BccI	CCATC	3 cut(s)	443, 707, 922
BceAI	ACGGC	1 cut(s)	715
BclI	TGATCA	3 cut(s)	48, 516, 811
BcoDI	GTCTC	1 cut(s)	387
BfaI	CTAG	2 cut(s)	377, 888
BfmI	CTRYAG	2 cut(s)	537, 874
BisI	GCNGC	5 cut(s)	183, 273, 387, 604, 837
BlsI	GCNGC	5 cut(s)	184, 274, 388, 605, 838
Bme18I	GGWCC	2 cut(s)	403, 865
BmgT120I	GGNCC	3 cut(s)	403, 796, 865
BmrI	ACTGGG	2 cut(s)	446, 960
BmsI	GCATC	3 cut(s)	223, 245, 823
BmuI	ACTGGG	2 cut(s)	446, 960
BpmI	CTGGAG	1 cut(s)	981
Bpu10I	CCTNAGC	1 cut(s)	869
Bsa29I	ATCGAT	1 cut(s)	14
BsaJI	CCNNGG	1 cut(s)	422
BsaWI	WCCGGW	1 cut(s)	138
Bsc4I	CCNNNNNNNGG	3 cut(s)	145, 707, 950
Bse118I	RCCGGY	1 cut(s)	981
Bse1I	ACTGG	5 cut(s)	252, 441, 712, 828, 955
BseAI	TCCGGA	1 cut(s)	138
BseCI	ATCGAT	1 cut(s)	14
BseDI	CCNNGG	1 cut(s)	422
BseGI	GGATG	2 cut(s)	256, 517
BseLI	CCNNNNNNNGG	3 cut(s)	145, 707, 950
BseMII	CTCAG	4 cut(s)	306, 648, 759, 913
BseNI	ACTGG	5 cut(s)	252, 441, 712, 828, 955
BseXI	GCAGC	5 cut(s)	169, 259, 373, 615, 848
BsgI	GTGCAG	1 cut(s)	622
Bsh1236I	CGCG	2 cut(s)	62, 728
BshFI	GGCC	2 cut(s)	543, 798
BshVI	ATCGAT	1 cut(s)	14
BsiHKAI	GWGCWC	1 cut(s)	332
BsiSI	CCGG	2 cut(s)	139, 982
BslI	CCNNNNNNNGG	3 cut(s)	145, 707, 950
BsmAI	GTCTC	1 cut(s)	387
BsmI	GAATGC	1 cut(s)	160
BsnI	GGCC	2 cut(s)	543, 798
Bsp1286I	GDGCHC	1 cut(s)	332
Bsp13I	TCCGGA	1 cut(s)	138
Bsp143I	GATC	9 cut(s)	48, 121, 516, 664, 682, 736, 751, 811, 966
Bsp19I	CCATGG	1 cut(s)	422
BspACI	CCGC	1 cut(s)	726
BspANI	GGCC	2 cut(s)	543, 798
BspCNI	CTCAG	4 cut(s)	305, 647, 758, 912
BspDI	ATCGAT	1 cut(s)	14
BspEI	TCCGGA	1 cut(s)	138
BspFNI	CGCG	2 cut(s)	62, 728
BspHI	TCATGA	1 cut(s)	995
BspPI	GGATC	1 cut(s)	672
BsrFI	RCCGGY	1 cut(s)	981
BsrI	ACTGG	5 cut(s)	252, 441, 712, 828, 955
BssAI	RCCGGY	1 cut(s)	981
BssECI	CCNNGG	1 cut(s)	422
BssMI	GATC	9 cut(s)	48, 121, 516, 664, 682, 736, 751, 811, 966
BssT1I	CCWWGG	1 cut(s)	422
Bst4CI	ACNGT	3 cut(s)	87, 263, 538
Bst6I	CTCTTC	1 cut(s)	439
BstC8I	GCNNGC	2 cut(s)	346, 983
BstDEI	CTNAG	6 cut(s)	292, 407, 634, 745, 869, 899
BstDSI	CCRYGG	1 cut(s)	422
BstF5I	GGATG	2 cut(s)	256, 517
BstFNI	CGCG	2 cut(s)	62, 728
BstHHI	GCGC	1 cut(s)	730
BstKTI	GATC	9 cut(s)	51, 124, 519, 667, 685, 739, 754, 814, 969
BstMAI	GTCTC	1 cut(s)	387
BstMBI	GATC	9 cut(s)	48, 121, 516, 664, 682, 736, 751, 811, 966
BstMWI	GCNNNNNNNGC	2 cut(s)	386, 612
BstNSI	RCATGY	3 cut(s)	117, 348, 676
BstSFI	CTRYAG	2 cut(s)	537, 874
BstUI	CGCG	2 cut(s)	62, 728
BstV1I	GCAGC	5 cut(s)	169, 259, 373, 615, 848
BstXI	CCANNNNNNTGG	1 cut(s)	862
Bsu15I	ATCGAT	1 cut(s)	14
BsuRI	GGCC	2 cut(s)	543, 798
BsuTUI	ATCGAT	1 cut(s)	14
BtgI	CCRYGG	1 cut(s)	422
BtgZI	GCGATG	1 cut(s)	222
BtsCI	GGATG	2 cut(s)	256, 517
BtsI	GCAGTG	1 cut(s)	355
BtsIMutI	CAGTG	6 cut(s)	268, 355, 534, 705, 835, 907
Cac8I	GCNNGC	2 cut(s)	346, 983
CciI	TCATGA	1 cut(s)	995
CfoI	GCGC	1 cut(s)	730
Cfr10I	RCCGGY	1 cut(s)	981
Cfr13I	GGNCC	3 cut(s)	403, 796, 865
ClaI	ATCGAT	1 cut(s)	14
Csp6I	GTAC	1 cut(s)	93
CviAII	CATG	7 cut(s)	52, 114, 209, 345, 423, 673, 996
CviQI	GTAC	1 cut(s)	93
DdeI	CTNAG	6 cut(s)	292, 407, 634, 745, 869, 899
DpnI	GATC	9 cut(s)	50, 123, 518, 666, 684, 738, 753, 813, 968
DpnII	GATC	9 cut(s)	48, 121, 516, 664, 682, 736, 751, 811, 966
DrdI	GACNNNNNNGTC	2 cut(s)	218, 401
DseDI	GACNNNNNNGTC	2 cut(s)	218, 401
Eam1104I	CTCTTC	1 cut(s)	439
EarI	CTCTTC	1 cut(s)	439
Ecl136II	GAGCTC	1 cut(s)	330
Eco130I	CCWWGG	1 cut(s)	422
Eco147I	AGGCCT	1 cut(s)	543
Eco24I	GRGCYC	1 cut(s)	332
Eco47I	GGWCC	2 cut(s)	403, 865
Eco53kI	GAGCTC	1 cut(s)	330
EcoICRI	GAGCTC	1 cut(s)	330
EcoO109I	RGGNCCY	1 cut(s)	796
EcoT14I	CCWWGG	1 cut(s)	422
EcoT22I	ATGCAT	1 cut(s)	238
EcoT38I	GRGCYC	1 cut(s)	332
ErhI	CCWWGG	1 cut(s)	422
FaeI	CATG	7 cut(s)	55, 117, 212, 348, 426, 676, 999
FalI	AAGNNNNNCTT	2 cut(s)	260, 292
FatI	CATG	7 cut(s)	51, 113, 208, 344, 422, 672, 995
FbaI	TGATCA	3 cut(s)	48, 516, 811
Fnu4HI	GCNGC	5 cut(s)	183, 273, 387, 604, 837
FokI	GGATG	2 cut(s)	263, 524
FriOI	GRGCYC	1 cut(s)	332
Fsp4HI	GCNGC	5 cut(s)	183, 273, 387, 604, 837
FspBI	CTAG	2 cut(s)	377, 888
GlaI	GCGC	1 cut(s)	729
GluI	GCNGC	5 cut(s)	183, 273, 387, 604, 837
GsuI	CTGGAG	1 cut(s)	981
HaeIII	GGCC	2 cut(s)	543, 798
HapII	CCGG	2 cut(s)	139, 982
HhaI	GCGC	1 cut(s)	730
Hin1II	CATG	7 cut(s)	55, 117, 212, 348, 426, 676, 999
Hin6I	GCGC	1 cut(s)	728
HinP1I	GCGC	1 cut(s)	728
HincII	GTYRAC	1 cut(s)	678
HindII	GTYRAC	1 cut(s)	678
HinfI	GANTC	3 cut(s)	321, 395, 914
HpaI	GTTAAC	1 cut(s)	678
HpaII	CCGG	2 cut(s)	139, 982
HphI	GGTGA	1 cut(s)	722
Hpy166II	GTNNAC	3 cut(s)	316, 678, 701
Hpy188I	TCNGA	4 cut(s)	153, 777, 811, 971
Hpy8I	GTNNAC	3 cut(s)	316, 678, 701
Hpy99I	CGWCG	1 cut(s)	33
HpyAV	CCTTC	4 cut(s)	73, 262, 501, 809
HpyCH4III	ACNGT	3 cut(s)	87, 263, 538
HpyCH4V	TGCA	6 cut(s)	158, 236, 344, 348, 603, 836
HpyF10VI	GCNNNNNNNGC	2 cut(s)	386, 612
HpyF3I	CTNAG	6 cut(s)	292, 407, 634, 745, 869, 899
Hsp92II	CATG	7 cut(s)	55, 117, 212, 348, 426, 676, 999
HspAI	GCGC	1 cut(s)	728
Kpn2I	TCCGGA	1 cut(s)	138
KroI	GCCGGC	1 cut(s)	981
KroNI	GCCGGC	1 cut(s)	983
Ksp22I	TGATCA	3 cut(s)	48, 516, 811
KspAI	GTTAAC	1 cut(s)	678
Kzo9I	GATC	9 cut(s)	48, 121, 516, 664, 682, 736, 751, 811, 966
LmnI	GCTCC	1 cut(s)	473
Lsp1109I	GCAGC	5 cut(s)	169, 259, 373, 615, 848
LweI	GCATC	3 cut(s)	223, 245, 823
MaeI	CTAG	2 cut(s)	377, 888
MaeIII	GTNAC	3 cut(s)	32, 253, 841
MalI	GATC	9 cut(s)	50, 123, 518, 666, 684, 738, 753, 813, 968
MboI	GATC	9 cut(s)	48, 121, 516, 664, 682, 736, 751, 811, 966
MboII	GAAGA	3 cut(s)	116, 453, 456
MfeI	CAATTG	1 cut(s)	585
MhlI	GDGCHC	1 cut(s)	332
MluCI	AATT	6 cut(s)	132, 283, 585, 816, 883, 991
MlyI	GAGTC	1 cut(s)	389
MnlI	CCTC	7 cut(s)	139, 293, 407, 554, 569, 908, 954
Mph1103I	ATGCAT	1 cut(s)	238
MroI	TCCGGA	1 cut(s)	138
MroNI	GCCGGC	1 cut(s)	981
MseI	TTAA	5 cut(s)	44, 89, 677, 786, 990
MslI	CAYNNNNRTG	1 cut(s)	207
MspA1I	CMGCKG	1 cut(s)	839
MspI	CCGG	2 cut(s)	139, 982
MunI	CAATTG	1 cut(s)	585
Mva1269I	GAATGC	1 cut(s)	160
MvnI	CGCG	2 cut(s)	62, 728
MwoI	GCNNNNNNNGC	2 cut(s)	386, 612
NaeI	GCCGGC	1 cut(s)	983
NcoI	CCATGG	1 cut(s)	422
NdeII	GATC	9 cut(s)	48, 121, 516, 664, 682, 736, 751, 811, 966
NgoMIV	GCCGGC	1 cut(s)	981
NlaIII	CATG	7 cut(s)	55, 117, 212, 348, 426, 676, 999
NmuCI	GTSAC	1 cut(s)	841
NsiI	ATGCAT	1 cut(s)	238
NspI	RCATGY	3 cut(s)	117, 348, 676
PaeI	GCATGC	1 cut(s)	348
PagI	TCATGA	1 cut(s)	995
PceI	AGGCCT	1 cut(s)	543
PciI	ACATGT	1 cut(s)	113
PctI	GAATGC	1 cut(s)	160
PdiI	GCCGGC	1 cut(s)	983
PfeI	GAWTC	2 cut(s)	321, 914
PflFI	GACNNNGTC	1 cut(s)	7
PflMI	CCANNNNNTGG	1 cut(s)	707
PkrI	GCNGC	5 cut(s)	184, 274, 388, 605, 838
PleI	GAGTC	1 cut(s)	389
PpsI	GAGTC	1 cut(s)	389
PscI	ACATGT	1 cut(s)	113
PshBI	ATTAAT	1 cut(s)	786
Psp124BI	GAGCTC	1 cut(s)	332
PspPI	GGNCC	3 cut(s)	403, 796, 865
PsyI	GACNNNGTC	1 cut(s)	7
PvuII	CAGCTG	1 cut(s)	839
RsaI	GTAC	1 cut(s)	94
RsaNI	GTAC	1 cut(s)	93
RseI	CAYNNNNRTG	1 cut(s)	207
SacI	GAGCTC	1 cut(s)	332
SaqAI	TTAA	5 cut(s)	44, 89, 677, 786, 990
SatI	GCNGC	5 cut(s)	183, 273, 387, 604, 837
Sau3AI	GATC	9 cut(s)	48, 121, 516, 664, 682, 736, 751, 811, 966
Sau96I	GGNCC	3 cut(s)	403, 796, 865
SchI	GAGTC	1 cut(s)	389
SduI	GDGCHC	1 cut(s)	332
SetI	ASST	9 cut(s)	11, 150, 332, 388, 580, 646, 841, 875, 881
SfaNI	GCATC	3 cut(s)	223, 245, 823
SfcI	CTRYAG	2 cut(s)	537, 874
SinI	GGWCC	2 cut(s)	403, 865
SmiMI	CAYNNNNRTG	1 cut(s)	207
SphI	GCATGC	1 cut(s)	348
Sse9I	AATT	6 cut(s)	132, 283, 585, 816, 883, 991
SseBI	AGGCCT	1 cut(s)	543
SsiI	CCGC	1 cut(s)	726
SspMI	CTAG	2 cut(s)	377, 888
SstI	GAGCTC	1 cut(s)	332
StuI	AGGCCT	1 cut(s)	543
StyI	CCWWGG	1 cut(s)	422
TaaI	ACNGT	3 cut(s)	87, 263, 538
TaqI	TCGA	3 cut(s)	14, 546, 739
TasI	AATT	6 cut(s)	132, 283, 585, 816, 883, 991
TatI	WGTACW	1 cut(s)	92
TfiI	GAWTC	2 cut(s)	321, 914
Tru1I	TTAA	5 cut(s)	44, 89, 677, 786, 990
Tru9I	TTAA	5 cut(s)	44, 89, 677, 786, 990
TscAI	CASTG	6 cut(s)	268, 355, 541, 712, 835, 907
TseFI	GTSAC	1 cut(s)	841
TseI	GCWGC	5 cut(s)	182, 272, 386, 603, 836
Tsp45I	GTSAC	1 cut(s)	841
TspDTI	ATGAA	1 cut(s)	984
TspRI	CASTG	6 cut(s)	268, 355, 541, 712, 835, 907
Tth111I	GACNNNGTC	1 cut(s)	7
Van91I	CCANNNNNTGG	1 cut(s)	707
VpaK11BI	GGWCC	2 cut(s)	403, 865
VspI	ATTAAT	1 cut(s)	786
XapI	RAATTY	1 cut(s)	816
XceI	RCATGY	3 cut(s)	117, 348, 676
XcmI	CCANNNNNNNNNTGG	1 cut(s)	397
XspI	CTAG	2 cut(s)	377, 888
Zsp2I	ATGCAT	1 cut(s)	238

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.