Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0009944

Physical Location & Seq

Genomic Coordinates Reverse (-)

960955 .. 962868

Gene Structure 1914 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G013800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 978 bp

ATGACCAGATTTAATGAATATAACAGTTTATTTTTTGTCATAAATCTGTTCATGTTGTGTTCAGCTGTGAGGTCTGATCTTAATGCAGATTTCTATAAGCAGACATGTCCAGATCTTCTCAAAATCGTCAGGAAAGAGGTCAAAGATGCACTAAAGATTGAAATGCGAATGGCGGCTTCCTTGCTTCGGCTTCACTTTGTCGATTGCTTTGTGAATGGCTGTGATGCATCAATTCTGTTGGATGGAAGCAACAGTGAGAAATTTGCTACTCCCAATTTGAACTCTGTTAGAGGATTTCAAGTGGTGGATGCAGTCAAAAGTGCTGTGGAGAGTGCATGCAGTGGAGTTGTATCCTGTGCTGATATATTAGCCCTAATTGCCCGGGATTCTGTTCTGTTGAGTGGAGGACCAACATGGAAGGTTTTATTGGGAAGAAGGGATGGACTGGTGCCAAACCAGAGAGGAGCAAATCTTGCTATTCCTTCTCAATATGACACACTGGACACAATAATTTCAAAATTTGCCAATGTAGGTCTCAATGTCACAGATGTGGTCTCCTTGTCAGGTGCTCATACAATTGGACAAGCAAGGTGTGCCACTTTCAGCAAGAGACTCTGGAACTTCTTCAACACAGGAGGTCCAGACAGCACAATGGAAAAAGATATGCTATCTGATCTGCGACATGTATGTCTCGTGAATGGCGATGGCAACGAAACCACAGCTCTTGATCGAAATTCGAATGATCTCTTTGACAACCATTACTACCAGAACTTGCTCGACGGGAAGGGCCTTCTTCATTCTGACCAAATTTTGTTTAATGGTGGTGATGATGAAACCAAAAGTGTTGTTGACAACTACAGAAGAAAGCCTAAACTTTTCTTTGATGACTTTATCAAGTCAATGATCAAGATGGGAAATATTGGCCCAGTGACTGGATCAAGTGGACAGATTCGAAAGAATTGCAGAGTGATCAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

326

Amino Acids

35.83

Weight (kDa)

6.94

Isoelectric Point (pI)

25.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009944)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19890
fragaria_vesca	FvH4_3g44351
malus_domestica	MD03G1014500.v1.1 MD11G1015400.v1.1
prunus_persica	Prupe.6G013700_v2.0.a1 Prupe.6G013800_v2.0.a1
pyrus_communis	pycom03g01190 pycom11g01090
rosa_chinensis	RchiOBHm_Chr5g0080741
rosa_laevigata	RLG00000012515 RLG00000036890
rosa_multiflora	Rmu_sc0003177.1_g000002 Rmu_sc0003177.1_g000006
rosa_roxburghii	Rroxscaffold_1G00002690
rosa_rugosa	Rorug05G0471700
rosa_samantha	Rh5AG525300 Rh5BG547700 Rh5CG571200 Rh5DG557600 Rh5DG558900
rosa_wichuraiana	Rw5G049290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	687
AccB1I	GGYRCC	1 cut(s)	448
AccB7I	CCANNNNNTGG	1 cut(s)	932
AciI	CCGC	1 cut(s)	173
AclWI	GGATC	1 cut(s)	943
AcsI	RAATTY	4 cut(s)	260, 518, 733, 807
AfiI	CCNNNNNNNGG	2 cut(s)	186, 932
AflIII	ACRYGT	2 cut(s)	104, 682
AgsI	TTSAA	5 cut(s)	161, 280, 299, 516, 628
AjuI	GAANNNNNNNTTGG	2 cut(s)	410, 442
AleI	CACNNNNGTG	1 cut(s)	548
AluBI	AGCT	2 cut(s)	65, 722
AluI	AGCT	2 cut(s)	65, 722
Alw21I	GWGCWC	1 cut(s)	571
Alw26I	GTCTC	4 cut(s)	539, 559, 604, 695
AlwI	GGATC	1 cut(s)	943
AlwNI	CAGNNNCTG	1 cut(s)	932
Ama87I	CYCGRG	1 cut(s)	381
AoxI	GGCC	2 cut(s)	787, 922
ApoI	RAATTY	4 cut(s)	260, 518, 733, 807
Asp700I	GAANNNNTTC	1 cut(s)	623
AspS9I	GGNCC	4 cut(s)	407, 638, 787, 923
AsuC2I	CCSGG	2 cut(s)	382, 383
AsuHPI	GGTGA	1 cut(s)	836
AsuII	TTCGAA	2 cut(s)	737, 952
AvaI	CYCGRG	1 cut(s)	381
AvaII	GGWCC	2 cut(s)	407, 638
BanI	GGYRCC	1 cut(s)	448
BauI	CACGAG	1 cut(s)	692
Bbv12I	GWGCWC	1 cut(s)	571
BccI	CCATC	4 cut(s)	236, 434, 698, 904
BcgI	CGANNNNNNTGC	2 cut(s)	942, 976
BciVI	GTATCC	1 cut(s)	361
BclI	TGATCA	2 cut(s)	903, 969
BcnI	CCSGG	2 cut(s)	382, 383
BcoDI	GTCTC	4 cut(s)	539, 559, 604, 695
BfmI	CTRYAG	1 cut(s)	856
BfuI	GTATCC	1 cut(s)	361
BglII	AGATCT	1 cut(s)	112
BisI	GCNGC	1 cut(s)	174
BlsI	GCNGC	1 cut(s)	175
Bme1390I	CCNGG	2 cut(s)	382, 383
Bme18I	GGWCC	2 cut(s)	407, 638
BmeT110I	CYCGRG	1 cut(s)	381
BmgT120I	GGNCC	4 cut(s)	407, 638, 787, 923
BmiI	GGNNCC	1 cut(s)	450
BmrFI	CCNGG	2 cut(s)	382, 383
BmrI	ACTGGG	1 cut(s)	920
BmsI	GCATC	4 cut(s)	136, 214, 236, 298
BmuI	ACTGGG	1 cut(s)	920
Bpu14I	TTCGAA	2 cut(s)	737, 952
BpuMI	CCSGG	2 cut(s)	382, 383
BsaI	GGTCTC	2 cut(s)	539, 559
BsaJI	CCNNGG	1 cut(s)	381
Bsc4I	CCNNNNNNNGG	2 cut(s)	186, 932
Bse1I	ACTGG	4 cut(s)	450, 504, 926, 937
BseDI	CCNNGG	1 cut(s)	381
BseGI	GGATG	3 cut(s)	247, 313, 445
BseLI	CCNNNNNNNGG	2 cut(s)	186, 932
BseNI	ACTGG	4 cut(s)	450, 504, 926, 937
BseRI	GAGGAG	1 cut(s)	477
BshFI	GGCC	2 cut(s)	789, 924
BshNI	GGYRCC	1 cut(s)	448
BsiHKAI	GWGCWC	1 cut(s)	571
BsiHKCI	CYCGRG	1 cut(s)	381
BsiSI	CCGG	1 cut(s)	382
BslI	CCNNNNNNNGG	2 cut(s)	186, 932
BsmAI	GTCTC	4 cut(s)	539, 559, 604, 695
BsnI	GGCC	2 cut(s)	789, 924
Bso31I	GGTCTC	2 cut(s)	539, 559
BsoBI	CYCGRG	1 cut(s)	381
Bsp119I	TTCGAA	2 cut(s)	737, 952
Bsp1286I	GDGCHC	1 cut(s)	571
Bsp143I	GATC	8 cut(s)	76, 112, 673, 727, 742, 903, 935, 969
BspACI	CCGC	1 cut(s)	173
BspANI	GGCC	2 cut(s)	789, 924
BspLI	GGNNCC	1 cut(s)	450
BspPI	GGATC	1 cut(s)	943
BspT104I	TTCGAA	2 cut(s)	737, 952
BspT107I	GGYRCC	1 cut(s)	448
BspTNI	GGTCTC	2 cut(s)	539, 559
BsrI	ACTGG	4 cut(s)	450, 504, 926, 937
BssECI	CCNNGG	1 cut(s)	381
BssMI	GATC	8 cut(s)	76, 112, 673, 727, 742, 903, 935, 969
BssSI	CACGAG	1 cut(s)	692
Bst2BI	CACGAG	1 cut(s)	692
Bst4CI	ACNGT	2 cut(s)	26, 254
BstAPI	GCANNNNNTGC	2 cut(s)	473, 593
BstBI	TTCGAA	2 cut(s)	737, 952
BstC8I	GCNNGC	1 cut(s)	337
BstF5I	GGATG	3 cut(s)	247, 313, 445
BstKTI	GATC	8 cut(s)	79, 115, 676, 730, 745, 906, 938, 972
BstMAI	GTCTC	4 cut(s)	539, 559, 604, 695
BstMBI	GATC	8 cut(s)	76, 112, 673, 727, 742, 903, 935, 969
BstMWI	GCNNNNNNNGC	3 cut(s)	377, 473, 593
BstNSI	RCATGY	3 cut(s)	108, 339, 686
BstSCI	CCNGG	2 cut(s)	380, 381
BstSFI	CTRYAG	1 cut(s)	856
BstX2I	RGATCY	1 cut(s)	112
BstYI	RGATCY	1 cut(s)	112
BsuI	GTATCC	1 cut(s)	361
BsuRI	GGCC	2 cut(s)	789, 924
BtgZI	GCGATG	1 cut(s)	717
BtsCI	GGATG	3 cut(s)	247, 313, 445
BtsI	GCAGTG	1 cut(s)	346
BtsIMutI	CAGTG	4 cut(s)	259, 346, 497, 933
Cac8I	GCNNGC	1 cut(s)	337
CaiI	CAGNNNCTG	1 cut(s)	932
Cfr13I	GGNCC	4 cut(s)	407, 638, 787, 923
Cfr9I	CCCGGG	1 cut(s)	381
CspCI	CAANNNNNGTGG	2 cut(s)	706, 741
CviAII	CATG	5 cut(s)	52, 105, 336, 414, 683
CviJI	RGCY	9 cut(s)	65, 176, 190, 219, 371, 722, 789, 868, 924
CviKI_1	RGCY	9 cut(s)	65, 176, 190, 219, 371, 722, 789, 868, 924
DpnI	GATC	8 cut(s)	78, 114, 675, 729, 744, 905, 937, 971
DpnII	GATC	8 cut(s)	76, 112, 673, 727, 742, 903, 935, 969
DrdI	GACNNNNNNGTC	1 cut(s)	687
DseDI	GACNNNNNNGTC	1 cut(s)	687
Eco31I	GGTCTC	2 cut(s)	539, 559
Eco47I	GGWCC	2 cut(s)	407, 638
Eco88I	CYCGRG	1 cut(s)	381
EcoO109I	RGGNCCY	1 cut(s)	787
EcoT22I	ATGCAT	1 cut(s)	229
FaeI	CATG	5 cut(s)	55, 108, 339, 417, 686
FatI	CATG	5 cut(s)	51, 104, 335, 413, 682
FbaI	TGATCA	2 cut(s)	903, 969
Fnu4HI	GCNGC	1 cut(s)	174
FokI	GGATG	3 cut(s)	254, 320, 452
Fsp4HI	GCNGC	1 cut(s)	174
GluI	GCNGC	1 cut(s)	174
HaeIII	GGCC	2 cut(s)	789, 924
HapII	CCGG	1 cut(s)	382
Hin1II	CATG	5 cut(s)	55, 108, 339, 417, 686
HincII	GTYRAC	1 cut(s)	850
HindII	GTYRAC	1 cut(s)	850
HinfI	GANTC	3 cut(s)	386, 612, 949
HpaII	CCGG	1 cut(s)	382
HphI	GGTGA	1 cut(s)	836
Hpy166II	GTNNAC	2 cut(s)	850, 944
Hpy188I	TCNGA	3 cut(s)	76, 673, 802
Hpy188III	TCNNGA	7 cut(s)	110, 130, 616, 641, 694, 725, 907
Hpy8I	GTNNAC	2 cut(s)	850, 944
Hpy99I	CGWCG	1 cut(s)	782
HpyAV	CCTTC	5 cut(s)	412, 429, 492, 778, 800
HpyCH4III	ACNGT	2 cut(s)	26, 254
HpyCH4V	TGCA	7 cut(s)	86, 149, 227, 311, 335, 339, 963
HpyF10VI	GCNNNNNNNGC	3 cut(s)	377, 473, 593
Hsp92II	CATG	5 cut(s)	55, 108, 339, 417, 686
Ksp22I	TGATCA	2 cut(s)	903, 969
Kzo9I	GATC	8 cut(s)	76, 112, 673, 727, 742, 903, 935, 969
LmnI	GCTCC	1 cut(s)	464
LweI	GCATC	4 cut(s)	136, 214, 236, 298
MaeIII	GTNAC	2 cut(s)	541, 928
MalI	GATC	8 cut(s)	78, 114, 675, 729, 744, 905, 937, 971
MboI	GATC	8 cut(s)	76, 112, 673, 727, 742, 903, 935, 969
MboII	GAAGA	5 cut(s)	107, 444, 616, 785, 873
MfeI	CAATTG	2 cut(s)	576, 973
MflI	RGATCY	1 cut(s)	112
MhlI	GDGCHC	1 cut(s)	571
MlyI	GAGTC	1 cut(s)	606
MmeI	TCCRAC	1 cut(s)	219
MnlI	CCTC	6 cut(s)	63, 130, 284, 398, 455, 629
Mph1103I	ATGCAT	1 cut(s)	229
MroXI	GAANNNNTTC	1 cut(s)	623
MseI	TTAA	3 cut(s)	12, 81, 816
MslI	CAYNNNNRTG	1 cut(s)	548
MspA1I	CMGCKG	1 cut(s)	65
MspI	CCGG	1 cut(s)	382
MspR9I	CCNGG	2 cut(s)	382, 383
MunI	CAATTG	2 cut(s)	576, 973
MwoI	GCNNNNNNNGC	3 cut(s)	377, 473, 593
NciI	CCSGG	2 cut(s)	382, 383
NdeII	GATC	8 cut(s)	76, 112, 673, 727, 742, 903, 935, 969
NlaIII	CATG	5 cut(s)	55, 108, 339, 417, 686
NlaIV	GGNNCC	1 cut(s)	450
NmuCI	GTSAC	2 cut(s)	541, 928
NsiI	ATGCAT	1 cut(s)	229
NspI	RCATGY	3 cut(s)	108, 339, 686
NspV	TTCGAA	2 cut(s)	737, 952
OliI	CACNNNNGTG	1 cut(s)	548
PaeI	GCATGC	1 cut(s)	339
PciI	ACATGT	2 cut(s)	104, 682
PcsI	WCGNNNNNNNCGW	1 cut(s)	699
PdmI	GAANNNNTTC	1 cut(s)	623
PfeI	GAWTC	2 cut(s)	386, 949
PflMI	CCANNNNNTGG	1 cut(s)	932
PkrI	GCNGC	1 cut(s)	175
PleI	GAGTC	1 cut(s)	606
PpsI	GAGTC	1 cut(s)	606
PscI	ACATGT	2 cut(s)	104, 682
PspN4I	GGNNCC	1 cut(s)	450
PspPI	GGNCC	4 cut(s)	407, 638, 787, 923
PstNI	CAGNNNCTG	1 cut(s)	932
PsuI	RGATCY	1 cut(s)	112
PvuII	CAGCTG	1 cut(s)	65
RseI	CAYNNNNRTG	1 cut(s)	548
SaqAI	TTAA	3 cut(s)	12, 81, 816
SatI	GCNGC	1 cut(s)	174
Sau3AI	GATC	8 cut(s)	76, 112, 673, 727, 742, 903, 935, 969
Sau96I	GGNCC	4 cut(s)	407, 638, 787, 923
SchI	GAGTC	1 cut(s)	606
ScrFI	CCNGG	2 cut(s)	382, 383
SduI	GDGCHC	1 cut(s)	571
SetI	ASST	9 cut(s)	67, 74, 141, 423, 535, 568, 593, 640, 724
SfaNI	GCATC	4 cut(s)	136, 214, 236, 298
SfcI	CTRYAG	1 cut(s)	856
SfuI	TTCGAA	2 cut(s)	737, 952
SinI	GGWCC	2 cut(s)	407, 638
SmaI	CCCGGG	1 cut(s)	383
SmiMI	CAYNNNNRTG	1 cut(s)	548
SphI	GCATGC	1 cut(s)	339
SsiI	CCGC	1 cut(s)	173
SspI	AATATT	1 cut(s)	919
StyD4I	CCNGG	2 cut(s)	380, 381
TaaI	ACNGT	2 cut(s)	26, 254
TaqI	TCGA	5 cut(s)	201, 730, 737, 777, 952
TauI	GCSGC	1 cut(s)	176
TfiI	GAWTC	2 cut(s)	386, 949
Tru1I	TTAA	3 cut(s)	12, 81, 816
Tru9I	TTAA	3 cut(s)	12, 81, 816
TscAI	CASTG	4 cut(s)	259, 346, 504, 933
TseFI	GTSAC	2 cut(s)	541, 928
Tsp45I	GTSAC	2 cut(s)	541, 928
TspDTI	ATGAA	4 cut(s)	30, 40, 785, 846
TspMI	CCCGGG	1 cut(s)	381
TspRI	CASTG	4 cut(s)	259, 346, 504, 933
Van91I	CCANNNNNTGG	1 cut(s)	932
VpaK11BI	GGWCC	2 cut(s)	407, 638
XapI	RAATTY	4 cut(s)	260, 518, 733, 807
XceI	RCATGY	3 cut(s)	108, 339, 686
XmaI	CCCGGG	1 cut(s)	381
XmnI	GAANNNNTTC	1 cut(s)	623
Zsp2I	ATGCAT	1 cut(s)	229

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.