Prupe.6G017900_v2.0.a1

ENT

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
1307835 .. 1314212
6378 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G017900.2

Sequence Viewer

Length: 1272 bp
ATGGACTACGAGCTCTCGGATAGCAGTGGTACAGATGATGACCTTCCGCCCTCTCATCAAAATAGATTTCAAAGGGGAGGCCGATCTTCTGGGAATGGAAGATCTGCAGCTGTGGGTTCTGCTTCATTACCTAGGATGCATGGTGACATGGAAACCCAAATCCACCACATTGAGCAAGAAGCATATTGCTCAGTCCTGCGGGCTTTTAAAGCTCAATCTGATGCCATCACCTGGGATAAGGAAAGTTTAATTACAGAACTTAGAAAGGAGCTGAGAGTATCTGATGAAGAACACAGAGAACTTTTGTCCAGGGTCAATGCTGATGACATGATCCGGAGGATAAGGGAATGGAGAAAAACAAGTGGGCTTCAACCTGGCACACTTACTGCTGCTCAGCCTGTTCATGACCCCCTACCTAGTCCAACTGTTTCAGCATCGCGCAAGAAACAGAAAACATCGCAGTCTGTAGCTTCCTTATCGCTTGGTGCTCCATCCCCTGCACTGCCTCCATCCATGCAACCGTCCTCATCAGCCTTGAGACGAGGTCCTCCTCCAGGAGGTCGGACCAAGAAGCCAAAATCATCCTCTCAGTACCCTTCCACAAGTATTACTGGAAGGCCCCAAGCCGCTAATCGAGGTTCTTCTGGTGCCTTTGTGGCAAGTGAGCCTGCTGAGGGAGCAACTTATGATCCATTAATAGGAAGAAAAATATCTCCTGAAGATATTCGGTGGGAAGGTGATGATCCTGGGATTTCTCGTAGAGGTGGTCGACCTGGACCTGGACCTGGACCTGGCCGAGGGATAAAAAAGTCCACAGCACGTGGTGGTGCAGTTTCAGGTGCAGGAAGAGGCAGAGGGGCCGCAAAGGGTCAGTCCAAGAAGGATTTGCCTCCACAACAAAATGGCATTGGCAGGAAGGCAATGAGTGACATTGAAATACTTCATACAGACTCTTTGATTAAAGAGGTTGAAAAGGTTTTTGGAGCAAGCCATCCTGATCCCATGGAGATCGAGAAAGCCAAGAAAGTTCTCAAAGAGCATGAACAGGCACTGGTTGATGCGATTGCAAGACTTGAAGATGCATCTGACGGTGAAAGTGATGAACATACATTCTCTCAAAGACAACCAATAGACCAAGATCGAGGATGGAGAAAACGGCAGTACGATGAAATGGCCGAAGGTCGGGCAGTTGACGGTGCAAATGGTAATAAAATGACAAGGGAGGGTAGAATTGCATCAGACGATCAACGTTTTGAGGGCGATGACATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

424

Amino Acids

45.76

Weight (kDa)

8.76

Isoelectric Point (pI)

54.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 647
AccB7I CCANNNNNTGG 1 cut(s) 231
AccI GTMKAC 1 cut(s) 769
AccII CGCG 1 cut(s) 439
AccIII TCCGGA 1 cut(s) 333
AciI CCGC 4 cut(s) 47, 199, 627, 861
AclI AACGTT 1 cut(s) 1249
AclWI GGATC 4 cut(s) 325, 683, 737, 992
AcoI YGGCCR 2 cut(s) 793, 1173
AcuI CTGAAG 1 cut(s) 738
AcvI CACGTG 1 cut(s) 821
AdeI CACNNNGTG 1 cut(s) 824
AfaI GTAC 3 cut(s) 31, 593, 1163
AgsI TTSAA 5 cut(s) 71, 371, 935, 971, 1076
AjnI CCWGG 9 cut(s) 230, 308, 373, 553, 745, 772, 778, 784, 790
AjuI GAANNNNNNNTTGG 2 cut(s) 963, 995
AluBI AGCT 5 cut(s) 13, 110, 212, 271, 470
AluI AGCT 5 cut(s) 13, 110, 212, 271, 470
Alw21I GWGCWC 2 cut(s) 15, 490
Alw26I GTCTC 1 cut(s) 532
AlwI GGATC 4 cut(s) 325, 683, 737, 992
AlwNI CAGNNNCTG 1 cut(s) 1051
Aor13HI TCCGGA 1 cut(s) 333
AoxI GGCC 5 cut(s) 79, 617, 793, 858, 1173
ApeKI GCWGC 2 cut(s) 107, 389
ArsI GACNNNNNNTTYG 2 cut(s) 857, 889
AseI ATTAAT 1 cut(s) 695
Asp700I GAANNNNTTC 2 cut(s) 723, 939
AspA2I CCTAGG 1 cut(s) 131
AspLEI GCGC 1 cut(s) 441
AspS9I GGNCC 7 cut(s) 545, 564, 618, 776, 782, 788, 858
AsuHPI GGTGA 4 cut(s) 155, 220, 749, 1103
AvaII GGWCC 5 cut(s) 545, 564, 776, 782, 788
AvrII CCTAGG 1 cut(s) 131
BanI GGYRCC 1 cut(s) 647
BanII GRGCYC 1 cut(s) 15
BbrPI CACGTG 1 cut(s) 821
Bbv12I GWGCWC 2 cut(s) 15, 490
BbvCI CCTCAGC 1 cut(s) 672
BbvI GCAGC 2 cut(s) 119, 376
BccI CCATC 5 cut(s) 233, 499, 517, 999, 1140
BceAI ACGGC 1 cut(s) 1172
BciT130I CCWGG 9 cut(s) 232, 310, 375, 555, 747, 774, 780, 786, 792
BcoDI GTCTC 1 cut(s) 532
BfaI CTAG 2 cut(s) 132, 417
BfmI CTRYAG 2 cut(s) 105, 465
BglI GCCNNNNNGGC 1 cut(s) 656
BglII AGATCT 1 cut(s) 101
BisI GCNGC 4 cut(s) 108, 390, 627, 861
BlnI CCTAGG 1 cut(s) 131
BlpI GCTNAGC 1 cut(s) 393
BlsI GCNGC 4 cut(s) 109, 391, 628, 862
Bme1390I CCNGG 9 cut(s) 232, 310, 375, 555, 747, 774, 780, 786, 792
Bme18I GGWCC 5 cut(s) 545, 564, 776, 782, 788
BmgT120I GGNCC 7 cut(s) 545, 564, 618, 776, 782, 788, 858
BmiI GGNNCC 3 cut(s) 620, 649, 859
BmrFI CCNGG 9 cut(s) 232, 310, 375, 555, 747, 774, 780, 786, 792
BmsI GCATC 7 cut(s) 126, 211, 443, 1048, 1069, 1091, 1244
BpmI CTGGAG 1 cut(s) 537
Bpu10I CCTNAGC 1 cut(s) 672
Bpu1102I GCTNAGC 1 cut(s) 393
BpuEI CTTGAG 1 cut(s) 556
BsaAI YACGTR 1 cut(s) 821
BsaJI CCNNGG 6 cut(s) 131, 231, 309, 746, 796, 1002
BsaWI WCCGGW 1 cut(s) 333
Bse1I ACTGG 2 cut(s) 616, 1056
Bse3DI GCAATG 1 cut(s) 927
BseAI TCCGGA 1 cut(s) 333
BseBI CCWGG 9 cut(s) 232, 310, 375, 555, 747, 774, 780, 786, 792
BseDI CCNNGG 6 cut(s) 131, 231, 309, 746, 796, 1002
BseGI GGATG 6 cut(s) 141, 491, 509, 581, 991, 1151
BseMI GCAATG 1 cut(s) 927
BseMII CTCAG 5 cut(s) 204, 263, 407, 602, 663
BseNI ACTGG 2 cut(s) 616, 1056
BseRI GAGGAG 1 cut(s) 540
BseXI GCAGC 2 cut(s) 119, 376
BsgI GTGCAG 3 cut(s) 483, 849, 861
Bsh1236I CGCG 1 cut(s) 439
BshFI GGCC 5 cut(s) 81, 619, 795, 860, 1175
BshNI GGYRCC 1 cut(s) 647
BsiHKAI GWGCWC 2 cut(s) 15, 490
BsiSI CCGG 1 cut(s) 334
BsmAI GTCTC 1 cut(s) 532
BsmBI CGTCTC 1 cut(s) 532
BsnI GGCC 5 cut(s) 81, 619, 795, 860, 1175
Bsp1286I GDGCHC 2 cut(s) 15, 490
Bsp13I TCCGGA 1 cut(s) 333
Bsp143I GATC 9 cut(s) 83, 101, 330, 688, 742, 997, 1008, 1138, 1243
Bsp1720I GCTNAGC 1 cut(s) 393
Bsp19I CCATGG 1 cut(s) 1002
BspACI CCGC 4 cut(s) 47, 199, 627, 861
BspANI GGCC 5 cut(s) 81, 619, 795, 860, 1175
BspCNI CTCAG 5 cut(s) 203, 264, 406, 601, 664
BspEI TCCGGA 1 cut(s) 333
BspFNI CGCG 1 cut(s) 439
BspHI TCATGA 1 cut(s) 403
BspLI GGNNCC 3 cut(s) 620, 649, 859
BspMAI CTGCAG 1 cut(s) 109
BspPI GGATC 4 cut(s) 325, 683, 737, 992
BspT107I GGYRCC 1 cut(s) 647
BsrDI GCAATG 1 cut(s) 927
BsrI ACTGG 2 cut(s) 616, 1056
BssECI CCNNGG 6 cut(s) 131, 231, 309, 746, 796, 1002
BssMI GATC 9 cut(s) 83, 101, 330, 688, 742, 997, 1008, 1138, 1243
BssT1I CCWWGG 2 cut(s) 131, 1002
Bst2UI CCWGG 9 cut(s) 232, 310, 375, 555, 747, 774, 780, 786, 792
Bst4CI ACNGT 4 cut(s) 427, 522, 1091, 1196
Bst6I CTCTTC 1 cut(s) 841
BstBAI YACGTR 1 cut(s) 821
BstC8I GCNNGC 3 cut(s) 201, 669, 988
BstDEI CTNAG 6 cut(s) 190, 260, 272, 393, 588, 672
BstDSI CCRYGG 1 cut(s) 1002
BstENI CCTNNNNNAGG 3 cut(s) 552, 555, 795
BstF5I GGATG 6 cut(s) 141, 491, 509, 581, 991, 1151
BstFNI CGCG 1 cut(s) 439
BstHHI GCGC 1 cut(s) 441
BstKTI GATC 9 cut(s) 86, 104, 333, 691, 745, 1000, 1011, 1141, 1246
BstMAI GTCTC 1 cut(s) 532
BstMBI GATC 9 cut(s) 83, 101, 330, 688, 742, 997, 1008, 1138, 1243
BstMWI GCNNNNNNNGC 3 cut(s) 209, 656, 677
BstNI CCWGG 9 cut(s) 232, 310, 375, 555, 747, 774, 780, 786, 792
BstSCI CCNGG 9 cut(s) 230, 308, 373, 553, 745, 772, 778, 784, 790
BstSFI CTRYAG 2 cut(s) 105, 465
BstUI CGCG 1 cut(s) 439
BstV1I GCAGC 2 cut(s) 119, 376
BstX2I RGATCY 1 cut(s) 101
BstYI RGATCY 1 cut(s) 101
BsuRI GGCC 5 cut(s) 81, 619, 795, 860, 1175
BtgI CCRYGG 1 cut(s) 1002
BtgZI GCGATG 2 cut(s) 420, 441
BtsCI GGATG 6 cut(s) 141, 491, 509, 581, 991, 1151
BtsI GCAGTG 2 cut(s) 31, 500
BtsIMutI CAGTG 3 cut(s) 31, 500, 1049
Cac8I GCNNGC 3 cut(s) 201, 669, 988
CaiI CAGNNNCTG 1 cut(s) 1051
CciI TCATGA 1 cut(s) 403
CfoI GCGC 1 cut(s) 441
Cfr13I GGNCC 7 cut(s) 545, 564, 618, 776, 782, 788, 858
Csp6I GTAC 3 cut(s) 30, 592, 1162
CviAII CATG 7 cut(s) 140, 148, 328, 404, 514, 1003, 1040
CviQI GTAC 3 cut(s) 30, 592, 1162
DdeI CTNAG 6 cut(s) 190, 260, 272, 393, 588, 672
DpnI GATC 9 cut(s) 85, 103, 332, 690, 744, 999, 1010, 1140, 1245
DpnII GATC 9 cut(s) 83, 101, 330, 688, 742, 997, 1008, 1138, 1243
DraI TTTAAA 1 cut(s) 208
DraIII CACNNNGTG 1 cut(s) 824
EaeI YGGCCR 2 cut(s) 793, 1173
Eam1104I CTCTTC 1 cut(s) 841
EarI CTCTTC 1 cut(s) 841
EciI GGCGGA 1 cut(s) 36
Ecl136II GAGCTC 1 cut(s) 13
Eco130I CCWWGG 2 cut(s) 131, 1002
Eco24I GRGCYC 1 cut(s) 15
Eco47I GGWCC 5 cut(s) 545, 564, 776, 782, 788
Eco53kI GAGCTC 1 cut(s) 13
Eco57I CTGAAG 1 cut(s) 738
Eco72I CACGTG 1 cut(s) 821
EcoICRI GAGCTC 1 cut(s) 13
EcoNI CCTNNNNNAGG 3 cut(s) 552, 555, 795
EcoO109I RGGNCCY 2 cut(s) 545, 618
EcoRII CCWGG 9 cut(s) 230, 308, 373, 553, 745, 772, 778, 784, 790
EcoT14I CCWWGG 2 cut(s) 131, 1002
EcoT22I ATGCAT 2 cut(s) 141, 1084
EcoT38I GRGCYC 1 cut(s) 15
ErhI CCWWGG 2 cut(s) 131, 1002
Esp3I CGTCTC 1 cut(s) 532
FaeI CATG 7 cut(s) 143, 151, 331, 407, 517, 1006, 1043
FatI CATG 7 cut(s) 139, 147, 327, 403, 513, 1002, 1039
FauI CCCGC 1 cut(s) 192
FauNDI CATATG 1 cut(s) 1268
FblI GTMKAC 1 cut(s) 769
Fnu4HI GCNGC 4 cut(s) 108, 390, 627, 861
FokI GGATG 6 cut(s) 148, 478, 496, 568, 978, 1158
FriOI GRGCYC 1 cut(s) 15
Fsp4HI GCNGC 4 cut(s) 108, 390, 627, 861
FspBI CTAG 2 cut(s) 132, 417
GlaI GCGC 1 cut(s) 440
GluI GCNGC 4 cut(s) 108, 390, 627, 861
GsuI CTGGAG 1 cut(s) 537
HaeIII GGCC 5 cut(s) 81, 619, 795, 860, 1175
HapII CCGG 1 cut(s) 334
HhaI GCGC 1 cut(s) 441
Hin1II CATG 7 cut(s) 143, 151, 331, 407, 517, 1006, 1043
Hin6I GCGC 1 cut(s) 439
HinP1I GCGC 1 cut(s) 439
HincII GTYRAC 2 cut(s) 770, 1192
HindII GTYRAC 2 cut(s) 770, 1192
HinfI GANTC 1 cut(s) 950
HpaII CCGG 1 cut(s) 334
HphI GGTGA 4 cut(s) 155, 220, 749, 1103
Hpy166II GTNNAC 3 cut(s) 770, 813, 1192
Hpy188I TCNGA 6 cut(s) 19, 220, 283, 564, 1087, 1240
Hpy188III TCNNGA 5 cut(s) 334, 404, 716, 995, 1012
Hpy8I GTNNAC 3 cut(s) 770, 813, 1192
HpyAV CCTTC 7 cut(s) 53, 606, 609, 728, 874, 910, 1172
HpyCH4III ACNGT 4 cut(s) 427, 522, 1091, 1196
HpyCH4IV ACGT 2 cut(s) 820, 1249
HpyF10VI GCNNNNNNNGC 3 cut(s) 209, 656, 677
HpyF3I CTNAG 6 cut(s) 190, 260, 272, 393, 588, 672
HpySE526I ACGT 2 cut(s) 820, 1249
Hsp92II CATG 7 cut(s) 143, 151, 331, 407, 517, 1006, 1043
HspAI GCGC 1 cut(s) 439
Kpn2I TCCGGA 1 cut(s) 333
Kzo9I GATC 9 cut(s) 83, 101, 330, 688, 742, 997, 1008, 1138, 1243
LmnI GCTCC 4 cut(s) 268, 493, 677, 983
Lsp1109I GCAGC 2 cut(s) 119, 376
LweI GCATC 7 cut(s) 126, 211, 443, 1048, 1069, 1091, 1244
MaeI CTAG 2 cut(s) 132, 417
MaeII ACGT 2 cut(s) 820, 1249
MaeIII GTNAC 2 cut(s) 143, 926
MalI GATC 9 cut(s) 85, 103, 332, 690, 744, 999, 1010, 1140, 1245
MboI GATC 9 cut(s) 83, 101, 330, 688, 742, 997, 1008, 1138, 1243
MboII GAAGA 8 cut(s) 78, 111, 299, 633, 714, 731, 858, 1088
MflI RGATCY 1 cut(s) 101
MhlI GDGCHC 2 cut(s) 15, 490
MluCI AATT 2 cut(s) 249, 1230
MlyI GAGTC 1 cut(s) 944
MmeI TCCRAC 2 cut(s) 446, 542
Mph1103I ATGCAT 2 cut(s) 141, 1084
MroI TCCGGA 1 cut(s) 333
MroXI GAANNNNTTC 2 cut(s) 723, 939
MseI TTAA 4 cut(s) 207, 248, 695, 960
MspA1I CMGCKG 1 cut(s) 110
MspI CCGG 1 cut(s) 334
MspR9I CCNGG 9 cut(s) 232, 310, 375, 555, 747, 774, 780, 786, 792
MvaI CCWGG 9 cut(s) 232, 310, 375, 555, 747, 774, 780, 786, 792
MvnI CGCG 1 cut(s) 439
MwoI GCNNNNNNNGC 3 cut(s) 209, 656, 677
NcoI CCATGG 1 cut(s) 1002
NdeI CATATG 1 cut(s) 1268
NdeII GATC 9 cut(s) 83, 101, 330, 688, 742, 997, 1008, 1138, 1243
NlaIII CATG 7 cut(s) 143, 151, 331, 407, 517, 1006, 1043
NlaIV GGNNCC 3 cut(s) 620, 649, 859
NmeAIII GCCGAG 1 cut(s) 821
NmuCI GTSAC 2 cut(s) 143, 926
NsiI ATGCAT 2 cut(s) 141, 1084
PagI TCATGA 1 cut(s) 403
PdmI GAANNNNTTC 2 cut(s) 723, 939
PflFI GACNNNGTC 1 cut(s) 543
PflMI CCANNNNNTGG 1 cut(s) 231
PfoI TCCNGGA 1 cut(s) 553
PkrI GCNGC 4 cut(s) 109, 391, 628, 862
PleI GAGTC 1 cut(s) 944
PmaCI CACGTG 1 cut(s) 821
PmlI CACGTG 1 cut(s) 821
PpsI GAGTC 1 cut(s) 944
Ppu21I YACGTR 1 cut(s) 821
PpuMI RGGWCCY 1 cut(s) 545
PshBI ATTAAT 1 cut(s) 695
Psp124BI GAGCTC 1 cut(s) 15
Psp1406I AACGTT 1 cut(s) 1249
Psp5II RGGWCCY 1 cut(s) 545
Psp6I CCWGG 9 cut(s) 230, 308, 373, 553, 745, 772, 778, 784, 790
PspCI CACGTG 1 cut(s) 821
PspGI CCWGG 9 cut(s) 230, 308, 373, 553, 745, 772, 778, 784, 790
PspN4I GGNNCC 3 cut(s) 620, 649, 859
PspPI GGNCC 7 cut(s) 545, 564, 618, 776, 782, 788, 858
PspPPI RGGWCCY 1 cut(s) 545
PstI CTGCAG 1 cut(s) 109
PstNI CAGNNNCTG 1 cut(s) 1051
PsuI RGATCY 1 cut(s) 101
PsyI GACNNNGTC 1 cut(s) 543
PvuII CAGCTG 1 cut(s) 110
RsaI GTAC 3 cut(s) 31, 593, 1163
RsaNI GTAC 3 cut(s) 30, 592, 1162
SacI GAGCTC 1 cut(s) 15
SalI GTCGAC 1 cut(s) 768
SaqAI TTAA 4 cut(s) 207, 248, 695, 960
SatI GCNGC 4 cut(s) 108, 390, 627, 861
Sau3AI GATC 9 cut(s) 83, 101, 330, 688, 742, 997, 1008, 1138, 1243
Sau96I GGNCC 7 cut(s) 545, 564, 618, 776, 782, 788, 858
SchI GAGTC 1 cut(s) 944
ScrFI CCNGG 9 cut(s) 232, 310, 375, 555, 747, 774, 780, 786, 792
SduI GDGCHC 2 cut(s) 15, 490
SfaNI GCATC 7 cut(s) 126, 211, 443, 1048, 1069, 1091, 1244
SfcI CTRYAG 2 cut(s) 105, 465
SinI GGWCC 5 cut(s) 545, 564, 776, 782, 788
SmlI CTYRAG 1 cut(s) 535
SmoI CTYRAG 1 cut(s) 535
Sse9I AATT 2 cut(s) 249, 1230
SsiI CCGC 4 cut(s) 47, 199, 627, 861
SspMI CTAG 2 cut(s) 132, 417
SstI GAGCTC 1 cut(s) 15
StyD4I CCNGG 9 cut(s) 230, 308, 373, 553, 745, 772, 778, 784, 790
StyI CCWWGG 2 cut(s) 131, 1002
TaaI ACNGT 4 cut(s) 427, 522, 1091, 1196
TaiI ACGT 2 cut(s) 823, 1252
TaqI TCGA 4 cut(s) 634, 769, 1011, 1141
TasI AATT 2 cut(s) 249, 1230
TauI GCSGC 2 cut(s) 629, 863
Tru1I TTAA 4 cut(s) 207, 248, 695, 960
Tru9I TTAA 4 cut(s) 207, 248, 695, 960
TscAI CASTG 3 cut(s) 31, 507, 1056
TseFI GTSAC 2 cut(s) 143, 926
TseI GCWGC 2 cut(s) 107, 389
Tsp45I GTSAC 2 cut(s) 143, 926
TspDTI ATGAA 7 cut(s) 114, 300, 392, 932, 1056, 1116, 1182
TspRI CASTG 3 cut(s) 31, 507, 1056
Tth111I GACNNNGTC 1 cut(s) 543
Van91I CCANNNNNTGG 1 cut(s) 231
VpaK11BI GGWCC 5 cut(s) 545, 564, 776, 782, 788
VspI ATTAAT 1 cut(s) 695
XagI CCTNNNNNAGG 3 cut(s) 552, 555, 795
XmaJI CCTAGG 1 cut(s) 131
XmiI GTMKAC 1 cut(s) 769
XmnI GAANNNNTTC 2 cut(s) 723, 939
XspI CTAG 2 cut(s) 132, 417
Zsp2I ATGCAT 2 cut(s) 141, 1084
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.