Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0004061

Physical Location & Seq

Genomic Coordinates Forward (+)

2824540 .. 2829251

Gene Structure 4712 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G037400.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 981 bp

ATGTGGAGATGGTGGAGAAGCAGTGGTATGGTGATGAAGCAAGTGGTTGGTAGCAACCACCTTGGGAAGCCCAACAGCCCCTACCCATGTATTGGGCAGGTGTTTGGATTAAAGGGTTTTGCAAAACAAGAATGTGGGTTGTTGACAAATCCGGCAATATCTTCATCATCACTTATACCCAGAAGGACACTGTCATCTTCTGATGATTTCAATGGAGCAGGAGAGATCAACAGAGGAGGAGGAGGAGGAGGAGGAGGAGAGACCATATCTTTTGCAGAGGCCAAGAGGCTGATGAGGCTTGTCAATGTGGAGGCTTTGAAGATGAGGCTTGGTGCTGAAGGAAAAGAGGCCATACCATATTCTGATCTTATTGAGGCCTGTCAAAGCATTGGGGTTGCCAGATCTCCAGAGGAGGCTGCAGCTTTTGCTCGAGTGCTTGATGAGGCTGGTGTAATCCTTCTCTTTCGGGACAAGGTCCTCCTTCATCCTAATAGGGTTGTGGAGCTGGTTCAAAGAGCAGTACCCCTTGTCCTGACTCCTGAAGATGACCCCATGTGGGAGGAGTTAAAGGTGCTGCAGGAGAAGAAGGAAGAAATTGATGTGCAGGCACATAAGCAGGTTCGGCGCATTCTCTGGTCCGGTCTGGTGCTAGTTGTGGCACAACTCGGGCTCTTTTTCAGGCTAACATATTGGGACTTCTCGTGGGATGTAGTGGAACCACTTGCATATTTCACAACAACAACTTGCATAGGCATAGGCTATGCCTACTTCTTGATCACTTCAAGAGATCCGACTTACCAAGATCTGATGAAGAGGCTTTTTCTCAGGAGGCAGAGGAAACTCATCAAGAGGCATAATTTTGATGTTGAAAGATTCAAAGAGATACAGAAAAAATGCGGCGCACCTCTACATGCGAGTGCCTCGATTAAGAATCGGGTAGGCATGGAAGTGGAGCTGGACGATGCTTTGCATAGGGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0015075 GO:0015085 GO:0015267 GO:0015291 GO:0015292 GO:0015318 GO:0022803 GO:0022804 GO:0022838 GO:0022857 GO:0022890 GO:0030001 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0072511 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

ko04020 ko04218 ko04621 map04020 map04218 map04621

Pfam Domains

Protein Families

MCU

Protein Analysis

327

Amino Acids

36.68

Weight (kDa)

8.88

Isoelectric Point (pI)

47.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004061)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09575 AT1G09575 AT1G57610 AT1G57610 AT1G57610 AT1G57610
fragaria_vesca	FvH4_3g41270 FvH4_3g41270
malus_domestica	MD03G1046100.v1.1 MD11G1048400.v1.1
prunus_persica	Prupe.6G037400_v2.0.a1 Prupe.6G037400_v2.0.a1 Prupe.6G037400_v2.0.a1
pyrus_communis	pycom03g03630
rosa_chinensis	RchiOBHm_Chr5g0074071
rosa_laevigata	RLG00000036451
rosa_multiflora	Rmu_co8305125.1_g000001 Rmu_sc0009296.1_g000014 Rmu_sc0011497.1_g000001 Rmu_sc0031541.1_g000001 Rmu_sc0036241.1_g000001
rosa_roxburghii	Rroxscaffold_1G00007310 Rroxscaffold_6G00421610
rosa_rugosa	Rorug05G0429000
rosa_samantha	Rh5AG486600 Rh5BG506900 Rh5CG530400 Rh5DG519300 Rh6BG292500 Rh7AG390400 Rh7BG274100 Rh7CG409400
rosa_wichuraiana	Rw5G045160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	88
Acc36I	ACCTGC	2 cut(s)	88, 607
AccB7I	CCANNNNNTGG	1 cut(s)	92
AciI	CCGC	1 cut(s)	897
AclWI	GGATC	1 cut(s)	782
AcuI	CTGAAG	2 cut(s)	357, 561
AfaI	GTAC	1 cut(s)	522
AfiI	CCNNNNNNNGG	2 cut(s)	92, 556
AgsI	TTSAA	6 cut(s)	211, 319, 512, 783, 869, 877
AluBI	AGCT	3 cut(s)	422, 505, 955
AluI	AGCT	3 cut(s)	422, 505, 955
Alw26I	GTCTC	1 cut(s)	254
AlwI	GGATC	1 cut(s)	782
Ama87I	CYCGRG	2 cut(s)	429, 665
AoxI	GGCC	3 cut(s)	279, 348, 375
ApeKI	GCWGC	3 cut(s)	416, 419, 574
AspLEI	GCGC	2 cut(s)	627, 902
AspS9I	GGNCC	2 cut(s)	475, 636
AsuHPI	GGTGA	1 cut(s)	43
AvaI	CYCGRG	2 cut(s)	429, 665
AvaII	GGWCC	2 cut(s)	475, 636
BanII	GRGCYC	1 cut(s)	672
BauI	CACGAG	1 cut(s)	700
BbvI	GCAGC	3 cut(s)	403, 431, 561
BccI	CCATC	1 cut(s)	3
BclI	TGATCA	1 cut(s)	774
BcoDI	GTCTC	1 cut(s)	254
BfaI	CTAG	1 cut(s)	650
BfmI	CTRYAG	2 cut(s)	417, 575
BfuAI	ACCTGC	2 cut(s)	88, 607
BglII	AGATCT	2 cut(s)	401, 802
BisI	GCNGC	4 cut(s)	417, 420, 575, 898
BlsI	GCNGC	4 cut(s)	418, 421, 576, 899
Bme18I	GGWCC	2 cut(s)	475, 636
BmeT110I	CYCGRG	2 cut(s)	429, 665
BmgT120I	GGNCC	2 cut(s)	475, 636
BmiI	GGNNCC	1 cut(s)	717
BmsI	GCATC	1 cut(s)	952
BpmI	CTGGAG	1 cut(s)	390
BsaI	GGTCTC	1 cut(s)	254
BsaJI	CCNNGG	1 cut(s)	61
BsaWI	WCCGGW	1 cut(s)	638
BsaXI	ACNNNNNCTCC	2 cut(s)	7, 37
Bsc4I	CCNNNNNNNGG	2 cut(s)	92, 556
BseDI	CCNNGG	1 cut(s)	61
BseGI	GGATG	2 cut(s)	484, 712
BseLI	CCNNNNNNNGG	2 cut(s)	92, 556
BseMII	CTCAG	1 cut(s)	838
BseXI	GCAGC	3 cut(s)	403, 431, 561
BsgI	GTGCAG	1 cut(s)	623
BshFI	GGCC	3 cut(s)	281, 350, 377
BsiHKCI	CYCGRG	2 cut(s)	429, 665
BsiSI	CCGG	2 cut(s)	152, 639
BslFI	GGGAC	2 cut(s)	482, 707
BslI	CCNNNNNNNGG	2 cut(s)	92, 556
BsmAI	GTCTC	1 cut(s)	254
BsmFI	GGGAC	2 cut(s)	482, 707
BsmI	GAATGC	1 cut(s)	627
BsnI	GGCC	3 cut(s)	281, 350, 377
Bso31I	GGTCTC	1 cut(s)	254
BsoBI	CYCGRG	2 cut(s)	429, 665
Bsp1286I	GDGCHC	1 cut(s)	672
Bsp143I	GATC	6 cut(s)	225, 364, 401, 774, 787, 802
BspACI	CCGC	1 cut(s)	897
BspANI	GGCC	3 cut(s)	281, 350, 377
BspCNI	CTCAG	1 cut(s)	837
BspLI	GGNNCC	1 cut(s)	717
BspMAI	CTGCAG	2 cut(s)	421, 579
BspMI	ACCTGC	2 cut(s)	88, 607
BspPI	GGATC	1 cut(s)	782
BspTNI	GGTCTC	1 cut(s)	254
BssECI	CCNNGG	1 cut(s)	61
BssMI	GATC	6 cut(s)	225, 364, 401, 774, 787, 802
BssSI	CACGAG	1 cut(s)	700
BssT1I	CCWWGG	1 cut(s)	61
Bst2BI	CACGAG	1 cut(s)	700
Bst4CI	ACNGT	1 cut(s)	192
Bst6I	CTCTTC	1 cut(s)	806
BstAPI	GCANNNNNTGC	1 cut(s)	425
BstC8I	GCNNGC	1 cut(s)	606
BstDEI	CTNAG	1 cut(s)	824
BstF5I	GGATG	2 cut(s)	484, 712
BstHHI	GCGC	2 cut(s)	627, 902
BstKTI	GATC	6 cut(s)	228, 367, 404, 777, 790, 805
BstMAI	GTCTC	1 cut(s)	254
BstMBI	GATC	6 cut(s)	225, 364, 401, 774, 787, 802
BstMWI	GCNNNNNNNGC	3 cut(s)	295, 425, 622
BstNSI	RCATGY	1 cut(s)	914
BstSFI	CTRYAG	2 cut(s)	417, 575
BstV1I	GCAGC	3 cut(s)	403, 431, 561
BstX2I	RGATCY	3 cut(s)	401, 787, 802
BstYI	RGATCY	3 cut(s)	401, 787, 802
BsuRI	GGCC	3 cut(s)	281, 350, 377
BtsCI	GGATG	2 cut(s)	484, 712
BtsI	GCAGTG	1 cut(s)	28
BtsIMutI	CAGTG	2 cut(s)	28, 188
BveI	ACCTGC	2 cut(s)	88, 607
Cac8I	GCNNGC	1 cut(s)	606
CfoI	GCGC	2 cut(s)	627, 902
Cfr13I	GGNCC	2 cut(s)	475, 636
Csp6I	GTAC	1 cut(s)	521
CviAII	CATG	4 cut(s)	87, 553, 911, 943
CviQI	GTAC	1 cut(s)	521
DdeI	CTNAG	1 cut(s)	824
DpnI	GATC	6 cut(s)	227, 366, 403, 776, 789, 804
DpnII	GATC	6 cut(s)	225, 364, 401, 774, 787, 802
Eam1104I	CTCTTC	1 cut(s)	806
EarI	CTCTTC	1 cut(s)	806
Eco130I	CCWWGG	1 cut(s)	61
Eco147I	AGGCCT	1 cut(s)	377
Eco24I	GRGCYC	1 cut(s)	672
Eco31I	GGTCTC	1 cut(s)	254
Eco47I	GGWCC	2 cut(s)	475, 636
Eco57I	CTGAAG	2 cut(s)	357, 561
Eco88I	CYCGRG	2 cut(s)	429, 665
EcoO109I	RGGNCCY	1 cut(s)	475
EcoT14I	CCWWGG	1 cut(s)	61
EcoT38I	GRGCYC	1 cut(s)	672
ErhI	CCWWGG	1 cut(s)	61
FaeI	CATG	4 cut(s)	90, 556, 914, 946
FaqI	GGGAC	2 cut(s)	482, 707
FatI	CATG	4 cut(s)	86, 552, 910, 942
FbaI	TGATCA	1 cut(s)	774
Fnu4HI	GCNGC	4 cut(s)	417, 420, 575, 898
FokI	GGATG	2 cut(s)	471, 719
FriOI	GRGCYC	1 cut(s)	672
Fsp4HI	GCNGC	4 cut(s)	417, 420, 575, 898
FspBI	CTAG	1 cut(s)	650
GlaI	GCGC	2 cut(s)	626, 901
GluI	GCNGC	4 cut(s)	417, 420, 575, 898
GsuI	CTGGAG	1 cut(s)	390
HaeIII	GGCC	3 cut(s)	281, 350, 377
HapII	CCGG	2 cut(s)	152, 639
HhaI	GCGC	2 cut(s)	627, 902
Hin1II	CATG	4 cut(s)	90, 556, 914, 946
Hin6I	GCGC	2 cut(s)	625, 900
HinP1I	GCGC	2 cut(s)	625, 900
HincII	GTYRAC	1 cut(s)	144
HindII	GTYRAC	1 cut(s)	144
HinfI	GANTC	3 cut(s)	535, 873, 931
HpaII	CCGG	2 cut(s)	152, 639
HphI	GGTGA	1 cut(s)	43
Hpy166II	GTNNAC	1 cut(s)	144
Hpy188I	TCNGA	4 cut(s)	202, 364, 792, 807
Hpy188III	TCNNGA	8 cut(s)	407, 467, 532, 539, 772, 783, 826, 847
Hpy8I	GTNNAC	1 cut(s)	144
HpyAV	CCTTC	5 cut(s)	177, 332, 467, 491, 580
HpyCH4III	ACNGT	1 cut(s)	192
HpyCH4V	TGCA	8 cut(s)	122, 275, 419, 577, 604, 725, 747, 970
HpyF10VI	GCNNNNNNNGC	3 cut(s)	295, 425, 622
HpyF3I	CTNAG	1 cut(s)	824
Hsp92II	CATG	4 cut(s)	90, 556, 914, 946
HspAI	GCGC	2 cut(s)	625, 900
Ksp22I	TGATCA	1 cut(s)	774
Kzo9I	GATC	6 cut(s)	225, 364, 401, 774, 787, 802
LmnI	GCTCC	3 cut(s)	215, 502, 952
Lsp1109I	GCAGC	3 cut(s)	403, 431, 561
LweI	GCATC	1 cut(s)	952
MaeI	CTAG	1 cut(s)	650
MalI	GATC	6 cut(s)	227, 366, 403, 776, 789, 804
MboI	GATC	6 cut(s)	225, 364, 401, 774, 787, 802
MboII	GAAGA	7 cut(s)	153, 189, 331, 554, 595, 602, 823
MflI	RGATCY	3 cut(s)	401, 787, 802
MhlI	GDGCHC	1 cut(s)	672
MluCI	AATT	2 cut(s)	594, 856
MlyI	GAGTC	1 cut(s)	529
MmeI	TCCRAC	1 cut(s)	815
MseI	TTAA	3 cut(s)	110, 566, 927
MslI	CAYNNNNRTG	2 cut(s)	915, 947
MspI	CCGG	2 cut(s)	152, 639
Mva1269I	GAATGC	1 cut(s)	627
MwoI	GCNNNNNNNGC	3 cut(s)	295, 425, 622
NdeII	GATC	6 cut(s)	225, 364, 401, 774, 787, 802
NlaIII	CATG	4 cut(s)	90, 556, 914, 946
NlaIV	GGNNCC	1 cut(s)	717
NspI	RCATGY	1 cut(s)	914
PaeR7I	CTCGAG	1 cut(s)	429
PaqCI	CACCTGC	1 cut(s)	88
PceI	AGGCCT	1 cut(s)	377
PctI	GAATGC	1 cut(s)	627
PfeI	GAWTC	2 cut(s)	873, 931
PflFI	GACNNNGTC	2 cut(s)	190, 473
PflMI	CCANNNNNTGG	1 cut(s)	92
PkrI	GCNGC	4 cut(s)	418, 421, 576, 899
PleI	GAGTC	1 cut(s)	529
PpsI	GAGTC	1 cut(s)	529
PpuMI	RGGWCCY	1 cut(s)	475
Psp5II	RGGWCCY	1 cut(s)	475
PspN4I	GGNNCC	1 cut(s)	717
PspPI	GGNCC	2 cut(s)	475, 636
PspPPI	RGGWCCY	1 cut(s)	475
PspXI	VCTCGAGB	1 cut(s)	429
PstI	CTGCAG	2 cut(s)	421, 579
PsuI	RGATCY	3 cut(s)	401, 787, 802
PsyI	GACNNNGTC	2 cut(s)	190, 473
RsaI	GTAC	1 cut(s)	522
RsaNI	GTAC	1 cut(s)	521
RseI	CAYNNNNRTG	2 cut(s)	915, 947
SaqAI	TTAA	3 cut(s)	110, 566, 927
SatI	GCNGC	4 cut(s)	417, 420, 575, 898
Sau3AI	GATC	6 cut(s)	225, 364, 401, 774, 787, 802
Sau96I	GGNCC	2 cut(s)	475, 636
SchI	GAGTC	1 cut(s)	529
SduI	GDGCHC	1 cut(s)	672
SetI	ASST	9 cut(s)	63, 102, 424, 477, 507, 573, 621, 907, 957
SfaNI	GCATC	1 cut(s)	952
SfcI	CTRYAG	2 cut(s)	417, 575
Sfr274I	CTCGAG	1 cut(s)	429
SinI	GGWCC	2 cut(s)	475, 636
SlaI	CTCGAG	1 cut(s)	429
SmiMI	CAYNNNNRTG	2 cut(s)	915, 947
SmlI	CTYRAG	1 cut(s)	429
SmoI	CTYRAG	1 cut(s)	429
Sse9I	AATT	2 cut(s)	594, 856
SseBI	AGGCCT	1 cut(s)	377
SsiI	CCGC	1 cut(s)	897
SspMI	CTAG	1 cut(s)	650
StuI	AGGCCT	1 cut(s)	377
StyI	CCWWGG	1 cut(s)	61
TaaI	ACNGT	1 cut(s)	192
TaqI	TCGA	2 cut(s)	430, 923
TasI	AATT	2 cut(s)	594, 856
TauI	GCSGC	1 cut(s)	900
TfiI	GAWTC	2 cut(s)	873, 931
Tru1I	TTAA	3 cut(s)	110, 566, 927
Tru9I	TTAA	3 cut(s)	110, 566, 927
TscAI	CASTG	2 cut(s)	28, 195
TseI	GCWGC	3 cut(s)	416, 419, 574
TspDTI	ATGAA	4 cut(s)	50, 153, 473, 824
TspRI	CASTG	2 cut(s)	28, 195
Tth111I	GACNNNGTC	2 cut(s)	190, 473
Van91I	CCANNNNNTGG	1 cut(s)	92
VpaK11BI	GGWCC	2 cut(s)	475, 636
XceI	RCATGY	1 cut(s)	914
XhoI	CTCGAG	1 cut(s)	429
XspI	CTAG	1 cut(s)	650

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.