Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0006397

Physical Location & Seq

Genomic Coordinates Reverse (-)

5396299 .. 5400116

Gene Structure 3818 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G079200.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 990 bp

ATGGTTGAAACACAAGATCAAAGAAAGCACTTGTCTCAGTCCAAGTCAATTGGTCGTTGCATAGTGTCCTGTATCTTCGTCTTCCTCACTCAATTGGTCCTCACTTTGGTCCCCCGCTTCTTCTCTGCCTCATCCTTTCTCACCCAACTGGCGTTCTCAGCTCTACTGCTTCTGCTGTTTCTGGGTTTTGGTGGATGGTGCAGAAGGAGGCTTCTTCAAGTCCGTGCTTCAGCTCCGGCTTTCGTTTTCTTCAACATTCTCTTTATTTGGGGCTTTTACGTCTCTGTTATCAGACAAGCTGTGCCACTACTAAACGACGCCGTTTTCAGCGGTGAGGTTGTGTTCCTCGTCATTGGTCTCTATAGTATACTTACAAGTGACCCTGGCATTGTAACAAATGGGTCTGCCTCTTCAGACCAACCTTTGAATAGTTCAGTTTCTCAAGTTGATAATCATGATGAGGAGTTGGAGCTTCCATGTCATGAATCAACTGAAGTAATAGGTTCTGGTTTGGGGACGAGGGTACGATATTGCAGAACCTGCAAGGCATACATAAAGGGTCTTGACCACCATTGTCCTGCTTTTGGGAATTGTATAGGCCAAAACAATCATCTCCTTTTCCTAATTCTTCTGTTTGGGTTTATCTCTACTGAAGCTTCTTATTTAGTATGCGCATCGCTTTTTGCTGCCAAATCCGGGATCTTAGATAGACCCAGCATGGAGCCTACTCTTTCTGAAAATTTAGCTGTTAGCACAATTCTGTTCATGATTCTCCAACTGGTATGGCAGGTGGTGTTTGTGATATGGCATATATATTGTGTATGCGTCAACATCAGAACTGATGAGTGGATAAAATGGAAGAAGTATCCAGAGTTCCAACTACTTGTTCAACCCCAGCCAGGGCAAAGCTTTGCGAATATTAGGTTCAGGAATCCGTATGACAAAGGCATTCTACAGAATGTGGAGGAGTTTCTAGCATTAAGAGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006464 GO:0006497 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0012505 GO:0016409 GO:0016740 GO:0016746 GO:0016747 GO:0018345 GO:0019538 GO:0034645 GO:0036211 GO:0042157 GO:0042158 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DHHC

Protein Analysis

330

Amino Acids

37.02

Weight (kDa)

7.54

Isoelectric Point (pI)

43.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006397)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g35813 FvH4_3g35813 FvH4_3g35813
malus_domestica	MD03G1096200.v1.1
prunus_persica	Prupe.6G079200_v2.0.a1 Prupe.6G079200_v2.0.a1 Prupe.6G079200_v2.0.a1 Prupe.6G079200_v2.0.a1 Prupe.6G079200_v2.0.a1 Prupe.6G079200_v2.0.a1 Prupe.6G079200_v2.0.a1 Prupe.6G079200_v2.0.a1
pyrus_communis	pycom03g07870
rosa_chinensis	RchiOBHm_Chr5g0064071
rosa_laevigata	RLG00000035699 RLG00000035701
rosa_multiflora	Rmu_sc0003547.1_g000007 Rmu_sc0005006.1_g000005
rosa_roxburghii	Rroxscaffold_1G00016800
rosa_rugosa	Rorug05G0362000 Rorug05G0362100
rosa_samantha	Rh5AG420600 Rh5BG436200 Rh5CG459000 Rh5DG449400 Rh5DG449600
rosa_wichuraiana	Rw5G039510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	778
Acc16I	TGCGCA	1 cut(s)	673
Acc36I	ACCTGC	2 cut(s)	548, 778
AccI	GTMKAC	1 cut(s)	367
AciI	CCGC	2 cut(s)	115, 330
AclWI	GGATC	1 cut(s)	707
AcsI	RAATTY	1 cut(s)	739
AcuI	CTGAAG	4 cut(s)	213, 396, 513, 672
AcyI	GRCGYC	1 cut(s)	318
AfaI	GTAC	1 cut(s)	525
AfiI	CCNNNNNNNGG	5 cut(s)	106, 584, 696, 899, 900
AgsI	TTSAA	5 cut(s)	8, 218, 253, 427, 890
AjnI	CCWGG	2 cut(s)	382, 898
AjuI	GAANNNNNNNTTGG	2 cut(s)	870, 902
AluBI	AGCT	7 cut(s)	161, 233, 299, 472, 656, 746, 909
AluI	AGCT	7 cut(s)	161, 233, 299, 472, 656, 746, 909
Alw26I	GTCTC	3 cut(s)	39, 286, 362
AlwI	GGATC	1 cut(s)	707
AlwNI	CAGNNNCTG	1 cut(s)	540
AoxI	GGCC	1 cut(s)	598
ApeKI	GCWGC	1 cut(s)	686
ApoI	RAATTY	1 cut(s)	739
AspLEI	GCGC	1 cut(s)	674
AspS9I	GGNCC	2 cut(s)	97, 109
AsuC2I	CCSGG	1 cut(s)	697
AsuHPI	GGTGA	2 cut(s)	133, 344
AvaII	GGWCC	2 cut(s)	97, 109
BbsI	GAAGAC	1 cut(s)	73
BbvI	GCAGC	1 cut(s)	673
BccI	CCATC	1 cut(s)	189
BceAI	ACGGC	1 cut(s)	305
BciT130I	CCWGG	2 cut(s)	384, 900
BciVI	GTATCC	1 cut(s)	876
BcnI	CCSGG	1 cut(s)	697
BcoDI	GTCTC	3 cut(s)	39, 286, 362
BfaI	CTAG	1 cut(s)	974
BfmI	CTRYAG	2 cut(s)	361, 953
BfuAI	ACCTGC	2 cut(s)	548, 778
BfuI	GTATCC	1 cut(s)	876
BisI	GCNGC	1 cut(s)	687
BlsI	GCNGC	1 cut(s)	688
Bme1390I	CCNGG	3 cut(s)	384, 697, 900
Bme18I	GGWCC	2 cut(s)	97, 109
BmgT120I	GGNCC	2 cut(s)	97, 109
BmiI	GGNNCC	2 cut(s)	111, 723
BmrFI	CCNGG	3 cut(s)	384, 697, 900
BmsI	GCATC	1 cut(s)	683
BpiI	GAAGAC	1 cut(s)	73
BpuEI	CTTGAG	1 cut(s)	426
BpuMI	CCSGG	1 cut(s)	697
BsaHI	GRCGYC	1 cut(s)	318
BsaI	GGTCTC	1 cut(s)	362
BsaJI	CCNNGG	2 cut(s)	382, 899
Bsc4I	CCNNNNNNNGG	5 cut(s)	106, 584, 696, 899, 900
Bse1I	ACTGG	2 cut(s)	153, 783
BseBI	CCWGG	2 cut(s)	384, 900
BseDI	CCNNGG	2 cut(s)	382, 899
BseGI	GGATG	2 cut(s)	131, 200
BseLI	CCNNNNNNNGG	5 cut(s)	106, 584, 696, 899, 900
BseMII	CTCAG	2 cut(s)	50, 171
BseNI	ACTGG	2 cut(s)	153, 783
BseRI	GAGGAG	2 cut(s)	476, 980
BseXI	GCAGC	1 cut(s)	673
BseYI	CCCAGC	2 cut(s)	713, 894
BsgI	GTGCAG	1 cut(s)	220
BshFI	GGCC	1 cut(s)	600
BsiSI	CCGG	2 cut(s)	236, 696
BslFI	GGGAC	2 cut(s)	95, 529
BslI	CCNNNNNNNGG	5 cut(s)	106, 584, 696, 899, 900
BsmAI	GTCTC	3 cut(s)	39, 286, 362
BsmBI	CGTCTC	1 cut(s)	286
BsmFI	GGGAC	2 cut(s)	95, 529
BsmI	GAATGC	1 cut(s)	948
BsnI	GGCC	1 cut(s)	600
Bso31I	GGTCTC	1 cut(s)	362
Bsp143I	GATC	2 cut(s)	16, 699
BspACI	CCGC	2 cut(s)	115, 330
BspANI	GGCC	1 cut(s)	600
BspCNI	CTCAG	2 cut(s)	49, 170
BspHI	TCATGA	3 cut(s)	454, 481, 765
BspLI	GGNNCC	2 cut(s)	111, 723
BspMI	ACCTGC	2 cut(s)	548, 778
BspPI	GGATC	1 cut(s)	707
BspTNI	GGTCTC	1 cut(s)	362
BsrI	ACTGG	2 cut(s)	153, 783
BssECI	CCNNGG	2 cut(s)	382, 899
BssMI	GATC	2 cut(s)	16, 699
BssNAI	GTATAC	1 cut(s)	368
BssNI	GRCGYC	1 cut(s)	318
Bst1107I	GTATAC	1 cut(s)	368
Bst2UI	CCWGG	2 cut(s)	384, 900
Bst6I	CTCTTC	1 cut(s)	415
BstACI	GRCGYC	1 cut(s)	318
BstAPI	GCANNNNNTGC	1 cut(s)	540
BstDEI	CTNAG	3 cut(s)	36, 157, 703
BstF5I	GGATG	2 cut(s)	131, 200
BstHHI	GCGC	1 cut(s)	674
BstKTI	GATC	2 cut(s)	19, 702
BstMAI	GTCTC	3 cut(s)	39, 286, 362
BstMBI	GATC	2 cut(s)	16, 699
BstMWI	GCNNNNNNNGC	3 cut(s)	158, 540, 983
BstNI	CCWGG	2 cut(s)	384, 900
BstSCI	CCNGG	3 cut(s)	382, 695, 898
BstSFI	CTRYAG	2 cut(s)	361, 953
BstV1I	GCAGC	1 cut(s)	673
BstV2I	GAAGAC	1 cut(s)	73
BstX2I	RGATCY	1 cut(s)	699
BstYI	RGATCY	1 cut(s)	699
BstZ17I	GTATAC	1 cut(s)	368
BsuI	GTATCC	1 cut(s)	876
BsuRI	GGCC	1 cut(s)	600
BtgZI	GCGATG	1 cut(s)	660
BtsCI	GGATG	2 cut(s)	131, 200
BveI	ACCTGC	2 cut(s)	548, 778
CaiI	CAGNNNCTG	1 cut(s)	540
CciI	TCATGA	3 cut(s)	454, 481, 765
CfoI	GCGC	1 cut(s)	674
Cfr13I	GGNCC	2 cut(s)	97, 109
CseI	GACGC	2 cut(s)	326, 814
Csp6I	GTAC	1 cut(s)	524
CviAII	CATG	5 cut(s)	455, 477, 482, 718, 766
CviQI	GTAC	1 cut(s)	524
DdeI	CTNAG	3 cut(s)	36, 157, 703
DpnI	GATC	2 cut(s)	18, 701
DpnII	GATC	2 cut(s)	16, 699
Eam1104I	CTCTTC	1 cut(s)	415
EarI	CTCTTC	1 cut(s)	415
Eco31I	GGTCTC	1 cut(s)	362
Eco47I	GGWCC	2 cut(s)	97, 109
Eco57I	CTGAAG	4 cut(s)	213, 396, 513, 672
EcoRII	CCWGG	2 cut(s)	382, 898
Esp3I	CGTCTC	1 cut(s)	286
FaeI	CATG	5 cut(s)	458, 480, 485, 721, 769
FaqI	GGGAC	2 cut(s)	95, 529
FatI	CATG	5 cut(s)	454, 476, 481, 717, 765
FauI	CCCGC	1 cut(s)	122
FblI	GTMKAC	1 cut(s)	367
Fnu4HI	GCNGC	1 cut(s)	687
FokI	GGATG	2 cut(s)	118, 207
Fsp4HI	GCNGC	1 cut(s)	687
FspAI	RTGCGCAY	1 cut(s)	673
FspBI	CTAG	1 cut(s)	974
FspI	TGCGCA	1 cut(s)	673
GlaI	GCGC	1 cut(s)	673
GluI	GCNGC	1 cut(s)	687
GsaI	CCCAGC	2 cut(s)	717, 898
HaeIII	GGCC	1 cut(s)	600
HapII	CCGG	2 cut(s)	236, 696
HgaI	GACGC	2 cut(s)	326, 814
HhaI	GCGC	1 cut(s)	674
Hin1I	GRCGYC	1 cut(s)	318
Hin1II	CATG	5 cut(s)	458, 480, 485, 721, 769
Hin6I	GCGC	1 cut(s)	672
HinP1I	GCGC	1 cut(s)	672
HincII	GTYRAC	1 cut(s)	829
HindII	GTYRAC	1 cut(s)	829
HindIII	AAGCTT	2 cut(s)	654, 907
HinfI	GANTC	3 cut(s)	485, 769, 931
HpaII	CCGG	2 cut(s)	236, 696
HphI	GGTGA	2 cut(s)	133, 344
Hpy166II	GTNNAC	2 cut(s)	368, 829
Hpy188I	TCNGA	4 cut(s)	293, 415, 736, 836
Hpy188III	TCNNGA	6 cut(s)	455, 482, 563, 766, 869, 928
Hpy8I	GTNNAC	2 cut(s)	368, 829
Hpy99I	CGWCG	1 cut(s)	320
HpyAV	CCTTC	1 cut(s)	198
HpyCH4IV	ACGT	1 cut(s)	279
HpyCH4V	TGCA	4 cut(s)	60, 201, 534, 543
HpyF10VI	GCNNNNNNNGC	3 cut(s)	158, 540, 983
HpyF3I	CTNAG	3 cut(s)	36, 157, 703
HpySE526I	ACGT	1 cut(s)	279
Hsp92I	GRCGYC	1 cut(s)	318
Hsp92II	CATG	5 cut(s)	458, 480, 485, 721, 769
HspAI	GCGC	1 cut(s)	672
Kzo9I	GATC	2 cut(s)	16, 699
LmnI	GCTCC	3 cut(s)	238, 469, 721
Lsp1109I	GCAGC	1 cut(s)	673
LweI	GCATC	1 cut(s)	683
MaeI	CTAG	1 cut(s)	974
MaeII	ACGT	1 cut(s)	279
MaeIII	GTNAC	2 cut(s)	377, 391
MalI	GATC	2 cut(s)	18, 701
MboI	GATC	2 cut(s)	16, 699
MboII	GAAGA	8 cut(s)	67, 73, 112, 206, 241, 402, 620, 871
MfeI	CAATTG	2 cut(s)	48, 92
MflI	RGATCY	1 cut(s)	699
MluCI	AATT	6 cut(s)	48, 92, 589, 624, 739, 756
MmeI	TCCRAC	3 cut(s)	447, 799, 901
MseI	TTAA	1 cut(s)	980
MspA1I	CMGCKG	1 cut(s)	330
MspI	CCGG	2 cut(s)	236, 696
MspR9I	CCNGG	3 cut(s)	384, 697, 900
MunI	CAATTG	2 cut(s)	48, 92
Mva1269I	GAATGC	1 cut(s)	948
MvaI	CCWGG	2 cut(s)	384, 900
MwoI	GCNNNNNNNGC	3 cut(s)	158, 540, 983
NciI	CCSGG	1 cut(s)	697
NdeII	GATC	2 cut(s)	16, 699
NlaIII	CATG	5 cut(s)	458, 480, 485, 721, 769
NlaIV	GGNNCC	2 cut(s)	111, 723
NmuCI	GTSAC	1 cut(s)	377
NsbI	TGCGCA	1 cut(s)	673
PagI	TCATGA	3 cut(s)	454, 481, 765
PaqCI	CACCTGC	1 cut(s)	778
PctI	GAATGC	1 cut(s)	948
PfeI	GAWTC	3 cut(s)	485, 769, 931
PfoI	TCCNGGA	1 cut(s)	695
PkrI	GCNGC	1 cut(s)	688
Psp6I	CCWGG	2 cut(s)	382, 898
PspFI	CCCAGC	2 cut(s)	713, 894
PspGI	CCWGG	2 cut(s)	382, 898
PspN4I	GGNNCC	2 cut(s)	111, 723
PspPI	GGNCC	2 cut(s)	97, 109
PsrI	GAACNNNNNNTAC	2 cut(s)	857, 889
PstNI	CAGNNNCTG	1 cut(s)	540
PsuI	RGATCY	1 cut(s)	699
RsaI	GTAC	1 cut(s)	525
RsaNI	GTAC	1 cut(s)	524
SaqAI	TTAA	1 cut(s)	980
SatI	GCNGC	1 cut(s)	687
Sau3AI	GATC	2 cut(s)	16, 699
Sau96I	GGNCC	2 cut(s)	97, 109
ScrFI	CCNGG	3 cut(s)	384, 697, 900
SfaNI	GCATC	1 cut(s)	683
SfcI	CTRYAG	2 cut(s)	361, 953
SinI	GGWCC	2 cut(s)	97, 109
SmlI	CTYRAG	1 cut(s)	441
SmoI	CTYRAG	1 cut(s)	441
Sse9I	AATT	6 cut(s)	48, 92, 589, 624, 739, 756
SsiI	CCGC	2 cut(s)	115, 330
SspI	AATATT	1 cut(s)	919
SspMI	CTAG	1 cut(s)	974
StyD4I	CCNGG	3 cut(s)	382, 695, 898
TaiI	ACGT	1 cut(s)	282
TasI	AATT	6 cut(s)	48, 92, 589, 624, 739, 756
TfiI	GAWTC	3 cut(s)	485, 769, 931
Tru1I	TTAA	1 cut(s)	980
Tru9I	TTAA	1 cut(s)	980
TseFI	GTSAC	1 cut(s)	377
TseI	GCWGC	1 cut(s)	686
Tsp45I	GTSAC	1 cut(s)	377
TspDTI	ATGAA	2 cut(s)	498, 754
TspGWI	ACGGA	2 cut(s)	212, 924
VpaK11BI	GGWCC	2 cut(s)	97, 109
XapI	RAATTY	1 cut(s)	739
XmiI	GTMKAC	1 cut(s)	367
XspI	CTAG	1 cut(s)	974

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.