Prupe.6G113700_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
8201469 .. 8203160
1692 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G113700.1

Sequence Viewer

Length: 210 bp
ATGGCACGAGCACGGAATGCCATTGTTGCTACTGGCTTGGTGGCTTTTGCAGCTGCGGGCTTGGCATTTCCCTTTTACATGGCATCATCCCCAAAGCCTGTCATTGACCCTTCAAAGCCACTGTCACCCCAAGCAACGTTTCGAGGGCCTTATATAAACACTGGTTCCTGTGACGTTGGCCCTGACCATCAGACCTACCCAAAGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

70

Amino Acids

7.27

Weight (kDa)

9.65

Isoelectric Point (pI)

56.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 56
AclI AACGTT 1 cut(s) 137
AgsI TTSAA 1 cut(s) 114
AjuI GAANNNNNNNTTGG 2 cut(s) 123, 155
AluBI AGCT 1 cut(s) 53
AluI AGCT 1 cut(s) 53
Alw21I GWGCWC 1 cut(s) 13
AoxI GGCC 2 cut(s) 146, 178
ApeKI GCWGC 2 cut(s) 50, 53
ArsI GACNNNNNNTTYG 2 cut(s) 107, 139
AspS9I GGNCC 2 cut(s) 146, 179
AsuHPI GGTGA 1 cut(s) 117
BauI CACGAG 1 cut(s) 6
Bbv12I GWGCWC 1 cut(s) 13
BbvI GCAGC 2 cut(s) 40, 62
BccI CCATC 1 cut(s) 195
BisI GCNGC 2 cut(s) 51, 54
BlsI GCNGC 2 cut(s) 52, 55
BmgT120I GGNCC 2 cut(s) 146, 179
BmiI GGNNCC 1 cut(s) 166
BmsI GCATC 1 cut(s) 92
Bse1I ACTGG 2 cut(s) 37, 166
BseGI GGATG 1 cut(s) 86
BseNI ACTGG 2 cut(s) 37, 166
BseXI GCAGC 2 cut(s) 40, 62
BshFI GGCC 2 cut(s) 148, 180
BsiHKAI GWGCWC 1 cut(s) 13
BsmI GAATGC 1 cut(s) 22
BsnI GGCC 2 cut(s) 148, 180
Bsp1286I GDGCHC 1 cut(s) 13
BspACI CCGC 1 cut(s) 56
BspANI GGCC 2 cut(s) 148, 180
BspLI GGNNCC 1 cut(s) 166
BsrI ACTGG 2 cut(s) 37, 166
BssSI CACGAG 1 cut(s) 6
Bst2BI CACGAG 1 cut(s) 6
Bst4CI ACNGT 1 cut(s) 123
BstAPI GCANNNNNTGC 1 cut(s) 17
BstC8I GCNNGC 1 cut(s) 58
BstF5I GGATG 1 cut(s) 86
BstMWI GCNNNNNNNGC 4 cut(s) 17, 26, 50, 62
BstV1I GCAGC 2 cut(s) 40, 62
BsuRI GGCC 2 cut(s) 148, 180
BtsCI GGATG 1 cut(s) 86
BtsIMutI CAGTG 2 cut(s) 119, 159
Cac8I GCNNGC 1 cut(s) 58
Cfr13I GGNCC 2 cut(s) 146, 179
CviAII CATG 1 cut(s) 79
CviJI RGCY 8 cut(s) 36, 44, 53, 60, 97, 118, 148, 180
CviKI_1 RGCY 8 cut(s) 36, 44, 53, 60, 97, 118, 148, 180
EcoO109I RGGNCCY 1 cut(s) 146
FaeI CATG 1 cut(s) 82
FaiI YATR 3 cut(s) 80, 153, 155
FatI CATG 1 cut(s) 78
FauI CCCGC 1 cut(s) 49
Fnu4HI GCNGC 2 cut(s) 51, 54
FokI GGATG 1 cut(s) 73
Fsp4HI GCNGC 2 cut(s) 51, 54
GluI GCNGC 2 cut(s) 51, 54
HaeIII GGCC 2 cut(s) 148, 180
Hin1II CATG 1 cut(s) 82
HphI GGTGA 1 cut(s) 117
Hpy188I TCNGA 1 cut(s) 192
HpyAV CCTTC 1 cut(s) 120
HpyCH4III ACNGT 1 cut(s) 123
HpyCH4IV ACGT 2 cut(s) 137, 174
HpyCH4V TGCA 1 cut(s) 50
HpyF10VI GCNNNNNNNGC 4 cut(s) 17, 26, 50, 62
HpySE526I ACGT 2 cut(s) 137, 174
Hsp92II CATG 1 cut(s) 82
LpnPI CCDG 5 cut(s) 18, 111, 147, 181, 195
Lsp1109I GCAGC 2 cut(s) 40, 62
LweI GCATC 1 cut(s) 92
MaeII ACGT 2 cut(s) 137, 174
MaeIII GTNAC 2 cut(s) 123, 170
MhlI GDGCHC 1 cut(s) 13
MnlI CCTC 1 cut(s) 137
MspA1I CMGCKG 1 cut(s) 53
Mva1269I GAATGC 1 cut(s) 22
MwoI GCNNNNNNNGC 4 cut(s) 17, 26, 50, 62
NlaIII CATG 1 cut(s) 82
NlaIV GGNNCC 1 cut(s) 166
NmuCI GTSAC 2 cut(s) 123, 170
PctI GAATGC 1 cut(s) 22
PkrI GCNGC 2 cut(s) 52, 55
Psp1406I AACGTT 1 cut(s) 137
PspN4I GGNNCC 1 cut(s) 166
PspPI GGNCC 2 cut(s) 146, 179
PvuII CAGCTG 1 cut(s) 53
SatI GCNGC 2 cut(s) 51, 54
Sau96I GGNCC 2 cut(s) 146, 179
SduI GDGCHC 1 cut(s) 13
SetI ASST 4 cut(s) 55, 140, 177, 197
SfaNI GCATC 1 cut(s) 92
SsiI CCGC 1 cut(s) 56
TaaI ACNGT 1 cut(s) 123
TaiI ACGT 2 cut(s) 140, 177
TaqI TCGA 1 cut(s) 142
TscAI CASTG 2 cut(s) 126, 166
TseFI GTSAC 2 cut(s) 123, 170
TseI GCWGC 2 cut(s) 50, 53
Tsp45I GTSAC 2 cut(s) 123, 170
TspGWI ACGGA 1 cut(s) 28
TspRI CASTG 2 cut(s) 126, 166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.