No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G22875 AT5G22875 AT5G22875 |
| fragaria_vesca | FvH4_3g30550 FvH4_3g30550 FvH4_3g30550 FvH4_3g30550 |
| malus_domestica | MD03G1128500.v1.1 MD11G1149300.v1.1 |
| prunus_persica | Prupe.6G113700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0056551 |
| rosa_laevigata | RLG00000035104 |
| rosa_multiflora | Rmu_co8378101.1_g000001 Rmu_sc0000366.1_g000045 Rmu_sc0006045.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00023790 |
| rosa_rugosa | Rorug05G0300700.1 |
| rosa_samantha | Rh5AG371100 Rh5BG382200 Rh5CG405400 Rh5DG395200 |
| rosa_wichuraiana | Rw5G034760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 169 |
| AciI | CCGC | 1 cut(s) | 56 |
| AclWI | GGATC | 1 cut(s) | 101 |
| AcyI | GRCGYC | 1 cut(s) | 83 |
| AlwI | GGATC | 1 cut(s) | 101 |
| AoxI | GGCC | 1 cut(s) | 146 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 107, 139 |
| AspS9I | GGNCC | 2 cut(s) | 146, 179 |
| AsuHPI | GGTGA | 1 cut(s) | 117 |
| AvaII | GGWCC | 1 cut(s) | 179 |
| AxyI | CCTNAGG | 1 cut(s) | 129 |
| BclI | TGATCA | 1 cut(s) | 184 |
| Bme18I | GGWCC | 1 cut(s) | 179 |
| BmgT120I | GGNCC | 2 cut(s) | 146, 179 |
| BmsI | GCATC | 1 cut(s) | 59 |
| Bsa29I | ATCGAT | 1 cut(s) | 105 |
| BsaHI | GRCGYC | 1 cut(s) | 83 |
| Bse1I | ACTGG | 2 cut(s) | 37, 166 |
| Bse21I | CCTNAGG | 1 cut(s) | 129 |
| BseCI | ATCGAT | 1 cut(s) | 105 |
| BseMII | CTCAG | 1 cut(s) | 143 |
| BseNI | ACTGG | 2 cut(s) | 37, 166 |
| Bsh1236I | CGCG | 1 cut(s) | 169 |
| BshFI | GGCC | 1 cut(s) | 148 |
| BshVI | ATCGAT | 1 cut(s) | 105 |
| BsmI | GAATGC | 1 cut(s) | 22 |
| BsnI | GGCC | 1 cut(s) | 148 |
| Bsp143I | GATC | 2 cut(s) | 106, 184 |
| BspACI | CCGC | 1 cut(s) | 56 |
| BspANI | GGCC | 1 cut(s) | 148 |
| BspCNI | CTCAG | 1 cut(s) | 142 |
| BspDI | ATCGAT | 1 cut(s) | 105 |
| BspFNI | CGCG | 1 cut(s) | 169 |
| BspPI | GGATC | 1 cut(s) | 101 |
| BsrI | ACTGG | 2 cut(s) | 37, 166 |
| BssMI | GATC | 2 cut(s) | 106, 184 |
| BssNI | GRCGYC | 1 cut(s) | 83 |
| Bst4CI | ACNGT | 1 cut(s) | 123 |
| BstACI | GRCGYC | 1 cut(s) | 83 |
| BstDEI | CTNAG | 1 cut(s) | 129 |
| BstFNI | CGCG | 1 cut(s) | 169 |
| BstKTI | GATC | 2 cut(s) | 109, 187 |
| BstMBI | GATC | 2 cut(s) | 106, 184 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 26, 62 |
| BstUI | CGCG | 1 cut(s) | 169 |
| Bsu15I | ATCGAT | 1 cut(s) | 105 |
| Bsu36I | CCTNAGG | 1 cut(s) | 129 |
| BsuRI | GGCC | 1 cut(s) | 148 |
| BsuTUI | ATCGAT | 1 cut(s) | 105 |
| BtsIMutI | CAGTG | 2 cut(s) | 119, 159 |
| Cfr13I | GGNCC | 2 cut(s) | 146, 179 |
| ClaI | ATCGAT | 1 cut(s) | 105 |
| CseI | GACGC | 1 cut(s) | 72 |
| CviAII | CATG | 1 cut(s) | 79 |
| CviJI | RGCY | 3 cut(s) | 36, 118, 148 |
| CviKI_1 | RGCY | 3 cut(s) | 36, 118, 148 |
| DdeI | CTNAG | 1 cut(s) | 129 |
| DpnI | GATC | 2 cut(s) | 108, 186 |
| DpnII | GATC | 2 cut(s) | 106, 184 |
| Eco47I | GGWCC | 1 cut(s) | 179 |
| Eco81I | CCTNAGG | 1 cut(s) | 129 |
| EcoO109I | RGGNCCY | 1 cut(s) | 146 |
| FaeI | CATG | 1 cut(s) | 82 |
| FaiI | YATR | 2 cut(s) | 80, 155 |
| FatI | CATG | 1 cut(s) | 78 |
| FauI | CCCGC | 1 cut(s) | 49 |
| FbaI | TGATCA | 1 cut(s) | 184 |
| HaeIII | GGCC | 1 cut(s) | 148 |
| HgaI | GACGC | 1 cut(s) | 72 |
| Hin1I | GRCGYC | 1 cut(s) | 83 |
| Hin1II | CATG | 1 cut(s) | 82 |
| HphI | GGTGA | 1 cut(s) | 117 |
| Hpy188I | TCNGA | 1 cut(s) | 192 |
| HpyCH4III | ACNGT | 1 cut(s) | 123 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 26, 62 |
| HpyF3I | CTNAG | 1 cut(s) | 129 |
| Hsp92I | GRCGYC | 1 cut(s) | 83 |
| Hsp92II | CATG | 1 cut(s) | 82 |
| Ksp22I | TGATCA | 1 cut(s) | 184 |
| Kzo9I | GATC | 2 cut(s) | 106, 184 |
| LpnPI | CCDG | 5 cut(s) | 18, 111, 116, 147, 195 |
| LweI | GCATC | 1 cut(s) | 59 |
| MaeIII | GTNAC | 1 cut(s) | 123 |
| MalI | GATC | 2 cut(s) | 108, 186 |
| MboI | GATC | 2 cut(s) | 106, 184 |
| MmeI | TCCRAC | 2 cut(s) | 134, 157 |
| MnlI | CCTC | 2 cut(s) | 137, 138 |
| Mva1269I | GAATGC | 1 cut(s) | 22 |
| MvnI | CGCG | 1 cut(s) | 169 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 26, 62 |
| NdeII | GATC | 2 cut(s) | 106, 184 |
| NlaIII | CATG | 1 cut(s) | 82 |
| NmuCI | GTSAC | 1 cut(s) | 123 |
| PctI | GAATGC | 1 cut(s) | 22 |
| PspPI | GGNCC | 2 cut(s) | 146, 179 |
| Sau3AI | GATC | 2 cut(s) | 106, 184 |
| Sau96I | GGNCC | 2 cut(s) | 146, 179 |
| SetI | ASST | 3 cut(s) | 130, 184, 197 |
| SfaNI | GCATC | 1 cut(s) | 59 |
| SinI | GGWCC | 1 cut(s) | 179 |
| SsiI | CCGC | 1 cut(s) | 56 |
| TaaI | ACNGT | 1 cut(s) | 123 |
| TaqI | TCGA | 2 cut(s) | 105, 142 |
| TscAI | CASTG | 2 cut(s) | 126, 166 |
| TseFI | GTSAC | 1 cut(s) | 123 |
| Tsp45I | GTSAC | 1 cut(s) | 123 |
| TspGWI | ACGGA | 1 cut(s) | 28 |
| TspRI | CASTG | 2 cut(s) | 126, 166 |
| VpaK11BI | GGWCC | 1 cut(s) | 179 |