XS domain
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g29670 |
| malus_domestica | MD03G1136700.v1.1 |
| prunus_persica | Prupe.6G121100_v2.0.a1 Prupe.6G121100_v2.0.a1 |
| pyrus_communis | pycom03g09250 |
| rosa_chinensis | RchiOBHm_Chr5g0055031 |
| rosa_laevigata | RLG00000034958 |
| rosa_multiflora | Rmu_co8511567.1_g000001 Rmu_sc0000925.1_g000013 |
| rosa_roxburghii | Rroxscaffold_1G00025460 |
| rosa_rugosa | Rorug05G0290200 Rorug05G0290300 |
| rosa_samantha | Rh5AG360200 Rh5BG371200 Rh5CG393500 Rh5DG385000 |
| rosa_wichuraiana | Rw5G033890 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 230, 455 |
| Acc16I | TGCGCA | 1 cut(s) | 1204 |
| Acc36I | ACCTGC | 2 cut(s) | 1478, 2419 |
| Acc65I | GGTACC | 2 cut(s) | 785, 2083 |
| AccB1I | GGYRCC | 4 cut(s) | 785, 905, 1759, 2083 |
| AccBSI | CCGCTC | 1 cut(s) | 118 |
| AccII | CGCG | 6 cut(s) | 54, 100, 145, 203, 597, 2403 |
| AccIII | TCCGGA | 2 cut(s) | 397, 557 |
| AclI | AACGTT | 1 cut(s) | 1714 |
| AclWI | GGATC | 7 cut(s) | 395, 408, 1160, 1410, 1488, 1775, 2680 |
| AcsI | RAATTY | 4 cut(s) | 1390, 1552, 2009, 2069 |
| AcuI | CTGAAG | 5 cut(s) | 1062, 1554, 1941, 2253, 2267 |
| AcyI | GRCGYC | 3 cut(s) | 227, 452, 1760 |
| AdeI | CACNNNGTG | 1 cut(s) | 2162 |
| AfaI | GTAC | 9 cut(s) | 83, 137, 787, 931, 1015, 1293, 1970, 2085, 2203 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 295, 317, 404, 564, 736, 1394, 1871, 2120, 2658 |
| AflII | CTTAAG | 1 cut(s) | 1964 |
| AflIII | ACRYGT | 1 cut(s) | 143 |
| AjnI | CCWGG | 7 cut(s) | 562, 751, 1168, 1616, 1696, 1735, 2688 |
| Alw21I | GWGCWC | 1 cut(s) | 1222 |
| Alw26I | GTCTC | 4 cut(s) | 220, 1431, 2197, 2642 |
| AlwI | GGATC | 7 cut(s) | 395, 408, 1160, 1410, 1488, 1775, 2680 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 181 |
| Ama87I | CYCGRG | 5 cut(s) | 85, 113, 126, 1068, 1458 |
| Aor13HI | TCCGGA | 2 cut(s) | 397, 557 |
| AoxI | GGCC | 5 cut(s) | 598, 866, 1518, 2267, 2542 |
| ApeKI | GCWGC | 4 cut(s) | 175, 635, 2186, 2556 |
| ApoI | RAATTY | 4 cut(s) | 1390, 1552, 2009, 2069 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1064, 1096 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2478 |
| Asp718I | GGTACC | 2 cut(s) | 785, 2083 |
| AspLEI | GCGC | 5 cut(s) | 203, 917, 1205, 1762, 1958 |
| AspS9I | GGNCC | 7 cut(s) | 49, 412, 511, 560, 1519, 1643, 1721 |
| AsuC2I | CCSGG | 7 cut(s) | 127, 128, 297, 312, 405, 1069, 1070 |
| AsuHPI | GGTGA | 5 cut(s) | 788, 1175, 2103, 2338, 2680 |
| AsuII | TTCGAA | 1 cut(s) | 278 |
| AvaI | CYCGRG | 5 cut(s) | 85, 113, 126, 1068, 1458 |
| AvaII | GGWCC | 6 cut(s) | 49, 412, 511, 560, 1643, 1721 |
| BamHI | GGATCC | 1 cut(s) | 400 |
| BanI | GGYRCC | 4 cut(s) | 785, 905, 1759, 2083 |
| BanII | GRGCYC | 2 cut(s) | 721, 1222 |
| BbsI | GAAGAC | 4 cut(s) | 30, 846, 1871, 2393 |
| Bbv12I | GWGCWC | 1 cut(s) | 1222 |
| BbvI | GCAGC | 4 cut(s) | 187, 622, 2198, 2568 |
| BccI | CCATC | 3 cut(s) | 896, 1579, 2169 |
| BceAI | ACGGC | 1 cut(s) | 175 |
| BciT130I | CCWGG | 7 cut(s) | 564, 753, 1170, 1618, 1698, 1737, 2690 |
| BcnI | CCSGG | 7 cut(s) | 127, 128, 297, 312, 405, 1069, 1070 |
| BcoDI | GTCTC | 4 cut(s) | 220, 1431, 2197, 2642 |
| BfaI | CTAG | 2 cut(s) | 45, 870 |
| BfoI | RGCGCY | 2 cut(s) | 1763, 1959 |
| BfrI | CTTAAG | 1 cut(s) | 1964 |
| BfuAI | ACCTGC | 2 cut(s) | 1478, 2419 |
| BisI | GCNGC | 8 cut(s) | 163, 176, 179, 598, 636, 2187, 2401, 2557 |
| BlpI | GCTNAGC | 2 cut(s) | 720, 1227 |
| BlsI | GCNGC | 8 cut(s) | 164, 177, 180, 599, 637, 2188, 2402, 2558 |
| Bme18I | GGWCC | 6 cut(s) | 49, 412, 511, 560, 1643, 1721 |
| BmeT110I | CYCGRG | 5 cut(s) | 85, 113, 126, 1068, 1458 |
| BmgT120I | GGNCC | 7 cut(s) | 49, 412, 511, 560, 1519, 1643, 1721 |
| BmrI | ACTGGG | 1 cut(s) | 990 |
| BmsI | GCATC | 3 cut(s) | 1084, 1600, 2218 |
| BmuI | ACTGGG | 1 cut(s) | 990 |
| BoxI | GACNNNNGTC | 1 cut(s) | 516 |
| BpiI | GAAGAC | 4 cut(s) | 30, 846, 1871, 2393 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1135, 1167 |
| BpmI | CTGGAG | 1 cut(s) | 774 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 720, 1227 |
| Bpu14I | TTCGAA | 1 cut(s) | 278 |
| BpuEI | CTTGAG | 4 cut(s) | 657, 1178, 1321, 1851 |
| BpuMI | CCSGG | 7 cut(s) | 127, 128, 297, 312, 405, 1069, 1070 |
| BsaHI | GRCGYC | 3 cut(s) | 227, 452, 1760 |
| BsaI | GGTCTC | 1 cut(s) | 2642 |
| BsaWI | WCCGGW | 4 cut(s) | 397, 557, 2272, 2314 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 835, 865, 2013, 2043 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 295, 317, 404, 564, 736, 1394, 1871, 2120, 2658 |
| Bse1I | ACTGG | 3 cut(s) | 946, 996, 1056 |
| Bse3DI | GCAATG | 4 cut(s) | 1025, 1212, 1294, 1452 |
| BseAI | TCCGGA | 2 cut(s) | 397, 557 |
| BseBI | CCWGG | 7 cut(s) | 564, 753, 1170, 1618, 1698, 1737, 2690 |
| BseGI | GGATG | 6 cut(s) | 1571, 1861, 2180, 2260, 2283, 2323 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 295, 317, 404, 564, 736, 1394, 1871, 2120, 2658 |
| BseMI | GCAATG | 4 cut(s) | 1025, 1212, 1294, 1452 |
| BseMII | CTCAG | 7 cut(s) | 734, 947, 1248, 1920, 2487, 2560, 2637 |
| BseNI | ACTGG | 3 cut(s) | 946, 996, 1056 |
| BseRI | GAGGAG | 2 cut(s) | 1101, 1946 |
| BseXI | GCAGC | 4 cut(s) | 187, 622, 2198, 2568 |
| BseYI | CCCAGC | 2 cut(s) | 416, 1993 |
| BsgI | GTGCAG | 1 cut(s) | 2205 |
| Bsh1236I | CGCG | 6 cut(s) | 54, 100, 145, 203, 597, 2403 |
| BshFI | GGCC | 5 cut(s) | 600, 868, 1520, 2269, 2544 |
| BshNI | GGYRCC | 4 cut(s) | 785, 905, 1759, 2083 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1222 |
| BsiHKCI | CYCGRG | 5 cut(s) | 85, 113, 126, 1068, 1458 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 295, 317, 404, 564, 736, 1394, 1871, 2120, 2658 |
| BsmAI | GTCTC | 4 cut(s) | 220, 1431, 2197, 2642 |
| BsmI | GAATGC | 2 cut(s) | 1534, 1857 |
| BsnI | GGCC | 5 cut(s) | 600, 868, 1520, 2269, 2544 |
| Bso31I | GGTCTC | 1 cut(s) | 2642 |
| BsoBI | CYCGRG | 5 cut(s) | 85, 113, 126, 1068, 1458 |
| Bsp119I | TTCGAA | 1 cut(s) | 278 |
| Bsp1286I | GDGCHC | 2 cut(s) | 721, 1222 |
| Bsp13I | TCCGGA | 2 cut(s) | 397, 557 |
| Bsp143I | GATC | 9 cut(s) | 400, 607, 769, 1165, 1402, 1480, 1780, 1810, 2685 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 720, 1227 |
| BspANI | GGCC | 5 cut(s) | 600, 868, 1520, 2269, 2544 |
| BspCNI | CTCAG | 7 cut(s) | 733, 946, 1249, 1921, 2488, 2559, 2638 |
| BspEI | TCCGGA | 2 cut(s) | 397, 557 |
| BspFNI | CGCG | 6 cut(s) | 54, 100, 145, 203, 597, 2403 |
| BspHI | TCATGA | 1 cut(s) | 154 |
| BspMI | ACCTGC | 2 cut(s) | 1478, 2419 |
| BspPI | GGATC | 7 cut(s) | 395, 408, 1160, 1410, 1488, 1775, 2680 |
| BspQI | GCTCTTC | 1 cut(s) | 2666 |
| BspT104I | TTCGAA | 1 cut(s) | 278 |
| BspT107I | GGYRCC | 4 cut(s) | 785, 905, 1759, 2083 |
| BspTI | CTTAAG | 1 cut(s) | 1964 |
| BspTNI | GGTCTC | 1 cut(s) | 2642 |
| BsrBI | CCGCTC | 1 cut(s) | 118 |
| BsrDI | GCAATG | 4 cut(s) | 1025, 1212, 1294, 1452 |
| BsrI | ACTGG | 3 cut(s) | 946, 996, 1056 |
| BssMI | GATC | 9 cut(s) | 400, 607, 769, 1165, 1402, 1480, 1780, 1810, 2685 |
| BssNI | GRCGYC | 3 cut(s) | 227, 452, 1760 |
| BssT1I | CCWWGG | 4 cut(s) | 1008, 2088, 2238, 2391 |
| Bst2UI | CCWGG | 7 cut(s) | 564, 753, 1170, 1618, 1698, 1737, 2690 |
| Bst6I | CTCTTC | 5 cut(s) | 755, 1136, 1231, 1470, 2666 |
| BstACI | GRCGYC | 3 cut(s) | 227, 452, 1760 |
| BstAFI | CTTAAG | 1 cut(s) | 1964 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2099, 2575 |
| BstBI | TTCGAA | 1 cut(s) | 278 |
| BstC8I | GCNNGC | 7 cut(s) | 8, 258, 1764, 2056, 2077, 2542, 2580 |
| BstDSI | CCRYGG | 1 cut(s) | 2401 |
| BstF5I | GGATG | 6 cut(s) | 1571, 1861, 2180, 2260, 2283, 2323 |
| BstFNI | CGCG | 6 cut(s) | 54, 100, 145, 203, 597, 2403 |
| BstH2I | RGCGCY | 2 cut(s) | 1763, 1959 |
| BstHHI | GCGC | 5 cut(s) | 203, 917, 1205, 1762, 1958 |
| BstKTI | GATC | 9 cut(s) | 403, 610, 772, 1168, 1405, 1483, 1783, 1813, 2688 |
| BstMAI | GTCTC | 4 cut(s) | 220, 1431, 2197, 2642 |
| BstMBI | GATC | 9 cut(s) | 400, 607, 769, 1165, 1402, 1480, 1780, 1810, 2685 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 914, 1284, 2099, 2575, 2588 |
| BstNI | CCWGG | 7 cut(s) | 564, 753, 1170, 1618, 1698, 1737, 2690 |
| BstNSI | RCATGY | 1 cut(s) | 2102 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 516 |
| BstUI | CGCG | 6 cut(s) | 54, 100, 145, 203, 597, 2403 |
| BstV1I | GCAGC | 4 cut(s) | 187, 622, 2198, 2568 |
| BstV2I | GAAGAC | 4 cut(s) | 30, 846, 1871, 2393 |
| BstX2I | RGATCY | 2 cut(s) | 400, 2685 |
| BstYI | RGATCY | 2 cut(s) | 400, 2685 |
| BsuRI | GGCC | 5 cut(s) | 600, 868, 1520, 2269, 2544 |
| BtgI | CCRYGG | 1 cut(s) | 2401 |
| BtsCI | GGATG | 6 cut(s) | 1571, 1861, 2180, 2260, 2283, 2323 |
| BtsI | GCAGTG | 2 cut(s) | 1708, 1747 |
| BtsIMutI | CAGTG | 5 cut(s) | 953, 1373, 1708, 1747, 2188 |
| BveI | ACCTGC | 2 cut(s) | 1478, 2419 |
| Cac8I | GCNNGC | 7 cut(s) | 8, 258, 1764, 2056, 2077, 2542, 2580 |
| CaiI | CAGNNNCTG | 1 cut(s) | 181 |
| CciI | TCATGA | 1 cut(s) | 154 |
| CfoI | GCGC | 5 cut(s) | 203, 917, 1205, 1762, 1958 |
| Cfr13I | GGNCC | 7 cut(s) | 49, 412, 511, 560, 1519, 1643, 1721 |
| Cfr42I | CCGCGG | 1 cut(s) | 2404 |
| Cfr9I | CCCGGG | 2 cut(s) | 126, 1068 |
| CseI | GACGC | 1 cut(s) | 134 |
| Csp6I | GTAC | 9 cut(s) | 82, 136, 786, 930, 1014, 1292, 1969, 2084, 2202 |
| CviQI | GTAC | 9 cut(s) | 82, 136, 786, 930, 1014, 1292, 1969, 2084, 2202 |
| DinI | GGCGCC | 1 cut(s) | 1761 |
| DpnI | GATC | 9 cut(s) | 402, 609, 771, 1167, 1404, 1482, 1782, 1812, 2687 |
| DpnII | GATC | 9 cut(s) | 400, 607, 769, 1165, 1402, 1480, 1780, 1810, 2685 |
| DraI | TTTAAA | 1 cut(s) | 582 |
| DraIII | CACNNNGTG | 1 cut(s) | 2162 |
| Eam1104I | CTCTTC | 5 cut(s) | 755, 1136, 1231, 1470, 2666 |
| EarI | CTCTTC | 5 cut(s) | 755, 1136, 1231, 1470, 2666 |
| EciI | GGCGGA | 1 cut(s) | 25 |
| Ecl136II | GAGCTC | 1 cut(s) | 1220 |
| Eco130I | CCWWGG | 4 cut(s) | 1008, 2088, 2238, 2391 |
| Eco147I | AGGCCT | 1 cut(s) | 868 |
| Eco24I | GRGCYC | 2 cut(s) | 721, 1222 |
| Eco31I | GGTCTC | 1 cut(s) | 2642 |
| Eco32I | GATATC | 1 cut(s) | 1540 |
| Eco47I | GGWCC | 6 cut(s) | 49, 412, 511, 560, 1643, 1721 |
| Eco53kI | GAGCTC | 1 cut(s) | 1220 |
| Eco57I | CTGAAG | 5 cut(s) | 1062, 1554, 1941, 2253, 2267 |
| Eco88I | CYCGRG | 5 cut(s) | 85, 113, 126, 1068, 1458 |
| EcoICRI | GAGCTC | 1 cut(s) | 1220 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1643, 1721 |
| EcoRI | GAATTC | 1 cut(s) | 1552 |
| EcoRII | CCWGG | 7 cut(s) | 562, 751, 1168, 1616, 1696, 1735, 2688 |
| EcoRV | GATATC | 1 cut(s) | 1540 |
| EcoT14I | CCWWGG | 4 cut(s) | 1008, 2088, 2238, 2391 |
| EcoT38I | GRGCYC | 2 cut(s) | 721, 1222 |
| EgeI | GGCGCC | 1 cut(s) | 1761 |
| EheI | GGCGCC | 1 cut(s) | 1761 |
| ErhI | CCWWGG | 4 cut(s) | 1008, 2088, 2238, 2391 |
| FauI | CCCGC | 3 cut(s) | 111, 374, 2396 |
| FauNDI | CATATG | 2 cut(s) | 1126, 2048 |
| Fnu4HI | GCNGC | 8 cut(s) | 163, 176, 179, 598, 636, 2187, 2401, 2557 |
| FokI | GGATG | 6 cut(s) | 1558, 1848, 2187, 2267, 2270, 2330 |
| FriOI | GRGCYC | 2 cut(s) | 721, 1222 |
| Fsp4HI | GCNGC | 8 cut(s) | 163, 176, 179, 598, 636, 2187, 2401, 2557 |
| FspBI | CTAG | 2 cut(s) | 45, 870 |
| FspI | TGCGCA | 1 cut(s) | 1204 |
| GlaI | GCGC | 5 cut(s) | 202, 916, 1204, 1761, 1957 |
| GluI | GCNGC | 8 cut(s) | 163, 176, 179, 598, 636, 2187, 2401, 2557 |
| GsaI | CCCAGC | 2 cut(s) | 420, 1997 |
| GsuI | CTGGAG | 1 cut(s) | 774 |
| HaeII | RGCGCY | 2 cut(s) | 1763, 1959 |
| HaeIII | GGCC | 5 cut(s) | 600, 868, 1520, 2269, 2544 |
| HgaI | GACGC | 1 cut(s) | 134 |
| HhaI | GCGC | 5 cut(s) | 203, 917, 1205, 1762, 1958 |
| Hin1I | GRCGYC | 3 cut(s) | 227, 452, 1760 |
| Hin6I | GCGC | 5 cut(s) | 201, 915, 1203, 1760, 1956 |
| HinP1I | GCGC | 5 cut(s) | 201, 915, 1203, 1760, 1956 |
| HincII | GTYRAC | 2 cut(s) | 493, 1323 |
| HindII | GTYRAC | 2 cut(s) | 493, 1323 |
| HindIII | AAGCTT | 3 cut(s) | 1044, 1116, 2486 |
| HinfI | GANTC | 9 cut(s) | 31, 70, 292, 707, 881, 1247, 1280, 1925, 2209 |
| HphI | GGTGA | 5 cut(s) | 788, 1175, 2103, 2338, 2680 |
| Hpy166II | GTNNAC | 3 cut(s) | 412, 493, 1323 |
| Hpy8I | GTNNAC | 3 cut(s) | 412, 493, 1323 |
| Hpy99I | CGWCG | 8 cut(s) | 68, 78, 150, 229, 232, 275, 457, 1236 |
| HpyAV | CCTTC | 7 cut(s) | 815, 1124, 1969, 2012, 2113, 2242, 2336 |
| HpyCH4IV | ACGT | 5 cut(s) | 227, 452, 646, 1714, 1753 |
| HpyCH4V | TGCA | 9 cut(s) | 1136, 1287, 1585, 1984, 2046, 2075, 2186, 2414, 2621 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 914, 1284, 2099, 2575, 2588 |
| HpySE526I | ACGT | 5 cut(s) | 227, 452, 646, 1714, 1753 |
| Hsp92I | GRCGYC | 3 cut(s) | 227, 452, 1760 |
| HspAI | GCGC | 5 cut(s) | 201, 915, 1203, 1760, 1956 |
| KasI | GGCGCC | 1 cut(s) | 1759 |
| Kpn2I | TCCGGA | 2 cut(s) | 397, 557 |
| KpnI | GGTACC | 2 cut(s) | 789, 2087 |
| KspI | CCGCGG | 1 cut(s) | 2404 |
| Kzo9I | GATC | 9 cut(s) | 400, 607, 769, 1165, 1402, 1480, 1780, 1810, 2685 |
| LguI | GCTCTTC | 1 cut(s) | 2666 |
| LmnI | GCTCC | 2 cut(s) | 560, 1390 |
| Lsp1109I | GCAGC | 4 cut(s) | 187, 622, 2198, 2568 |
| LweI | GCATC | 3 cut(s) | 1084, 1600, 2218 |
| MaeI | CTAG | 2 cut(s) | 45, 870 |
| MaeII | ACGT | 5 cut(s) | 227, 452, 646, 1714, 1753 |
| MaeIII | GTNAC | 7 cut(s) | 800, 1183, 1465, 1566, 2029, 2109, 2434 |
| MalI | GATC | 9 cut(s) | 402, 609, 771, 1167, 1404, 1482, 1782, 1812, 2687 |
| MbiI | CCGCTC | 1 cut(s) | 118 |
| MboI | GATC | 9 cut(s) | 400, 607, 769, 1165, 1402, 1480, 1780, 1810, 2685 |
| MflI | RGATCY | 2 cut(s) | 400, 2685 |
| MhlI | GDGCHC | 2 cut(s) | 721, 1222 |
| MluI | ACGCGT | 1 cut(s) | 143 |
| Mly113I | GGCGCC | 1 cut(s) | 1760 |
| MlyI | GAGTC | 4 cut(s) | 40, 701, 1241, 1274 |
| MmeI | TCCRAC | 1 cut(s) | 814 |
| MroI | TCCGGA | 2 cut(s) | 397, 557 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2478 |
| MseI | TTAA | 5 cut(s) | 581, 1416, 1965, 2361, 2442 |
| MslI | CAYNNNNRTG | 1 cut(s) | 477 |
| MspA1I | CMGCKG | 2 cut(s) | 181, 2403 |
| MspCI | CTTAAG | 1 cut(s) | 1964 |
| Mva1269I | GAATGC | 2 cut(s) | 1534, 1857 |
| MvaI | CCWGG | 7 cut(s) | 564, 753, 1170, 1618, 1698, 1737, 2690 |
| MvnI | CGCG | 6 cut(s) | 54, 100, 145, 203, 597, 2403 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 914, 1284, 2099, 2575, 2588 |
| NarI | GGCGCC | 1 cut(s) | 1760 |
| NciI | CCSGG | 7 cut(s) | 127, 128, 297, 312, 405, 1069, 1070 |
| NdeI | CATATG | 2 cut(s) | 1126, 2048 |
| NdeII | GATC | 9 cut(s) | 400, 607, 769, 1165, 1402, 1480, 1780, 1810, 2685 |
| NmeAIII | GCCGAG | 1 cut(s) | 1132 |
| NmuCI | GTSAC | 5 cut(s) | 800, 1183, 1465, 2109, 2434 |
| NsbI | TGCGCA | 1 cut(s) | 1204 |
| NspI | RCATGY | 1 cut(s) | 2102 |
| NspV | TTCGAA | 1 cut(s) | 278 |
| PagI | TCATGA | 1 cut(s) | 154 |
| PceI | AGGCCT | 1 cut(s) | 868 |
| PciSI | GCTCTTC | 1 cut(s) | 2666 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 97 |
| PctI | GAATGC | 2 cut(s) | 1534, 1857 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2478 |
| PfeI | GAWTC | 5 cut(s) | 70, 292, 881, 1925, 2209 |
| PkrI | GCNGC | 8 cut(s) | 164, 177, 180, 599, 637, 2188, 2402, 2558 |
| PleI | GAGTC | 4 cut(s) | 39, 701, 1241, 1274 |
| PluTI | GGCGCC | 1 cut(s) | 1763 |
| PpsI | GAGTC | 4 cut(s) | 39, 701, 1241, 1274 |
| PpuMI | RGGWCCY | 2 cut(s) | 1643, 1721 |
| PshAI | GACNNNNGTC | 1 cut(s) | 516 |
| Psp124BI | GAGCTC | 1 cut(s) | 1222 |
| Psp1406I | AACGTT | 1 cut(s) | 1714 |
| Psp5II | RGGWCCY | 2 cut(s) | 1643, 1721 |
| Psp6I | CCWGG | 7 cut(s) | 562, 751, 1168, 1616, 1696, 1735, 2688 |
| PspFI | CCCAGC | 2 cut(s) | 416, 1993 |
| PspGI | CCWGG | 7 cut(s) | 562, 751, 1168, 1616, 1696, 1735, 2688 |
| PspPI | GGNCC | 7 cut(s) | 49, 412, 511, 560, 1519, 1643, 1721 |
| PspPPI | RGGWCCY | 2 cut(s) | 1643, 1721 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2017, 2049 |
| PstNI | CAGNNNCTG | 1 cut(s) | 181 |
| PsuI | RGATCY | 2 cut(s) | 400, 2685 |
| RsaI | GTAC | 9 cut(s) | 83, 137, 787, 931, 1015, 1293, 1970, 2085, 2203 |
| RsaNI | GTAC | 9 cut(s) | 82, 136, 786, 930, 1014, 1292, 1969, 2084, 2202 |
| RseI | CAYNNNNRTG | 1 cut(s) | 477 |
| SacI | GAGCTC | 1 cut(s) | 1222 |
| SacII | CCGCGG | 1 cut(s) | 2404 |
| SapI | GCTCTTC | 1 cut(s) | 2666 |
| SaqAI | TTAA | 5 cut(s) | 581, 1416, 1965, 2361, 2442 |
| SatI | GCNGC | 8 cut(s) | 163, 176, 179, 598, 636, 2187, 2401, 2557 |
| Sau3AI | GATC | 9 cut(s) | 400, 607, 769, 1165, 1402, 1480, 1780, 1810, 2685 |
| Sau96I | GGNCC | 7 cut(s) | 49, 412, 511, 560, 1519, 1643, 1721 |
| SchI | GAGTC | 4 cut(s) | 40, 701, 1241, 1274 |
| SduI | GDGCHC | 2 cut(s) | 721, 1222 |
| SfaNI | GCATC | 3 cut(s) | 1084, 1600, 2218 |
| SfoI | GGCGCC | 1 cut(s) | 1761 |
| Sfr303I | CCGCGG | 1 cut(s) | 2404 |
| SfuI | TTCGAA | 1 cut(s) | 278 |
| SgrBI | CCGCGG | 1 cut(s) | 2404 |
| SinI | GGWCC | 6 cut(s) | 49, 412, 511, 560, 1643, 1721 |
| SmaI | CCCGGG | 2 cut(s) | 128, 1070 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 477 |
| SmlI | CTYRAG | 5 cut(s) | 672, 1157, 1300, 1866, 1964 |
| SmoI | CTYRAG | 5 cut(s) | 672, 1157, 1300, 1866, 1964 |
| SseBI | AGGCCT | 1 cut(s) | 868 |
| SspDI | GGCGCC | 1 cut(s) | 1759 |
| SspI | AATATT | 1 cut(s) | 1414 |
| SspMI | CTAG | 2 cut(s) | 45, 870 |
| SstI | GAGCTC | 1 cut(s) | 1222 |
| StuI | AGGCCT | 1 cut(s) | 868 |
| StyI | CCWWGG | 4 cut(s) | 1008, 2088, 2238, 2391 |
| TaiI | ACGT | 5 cut(s) | 230, 455, 649, 1717, 1756 |
| TaqI | TCGA | 9 cut(s) | 224, 230, 278, 922, 1061, 1513, 1825, 2063, 2640 |
| TaqII | GACCGA | 1 cut(s) | 24 |
| TatI | WGTACW | 1 cut(s) | 1968 |
| TauI | GCSGC | 4 cut(s) | 165, 181, 600, 2403 |
| TfiI | GAWTC | 5 cut(s) | 70, 292, 881, 1925, 2209 |
| Tru1I | TTAA | 5 cut(s) | 581, 1416, 1965, 2361, 2442 |
| Tru9I | TTAA | 5 cut(s) | 581, 1416, 1965, 2361, 2442 |
| TscAI | CASTG | 5 cut(s) | 953, 1373, 1708, 1747, 2188 |
| TseFI | GTSAC | 5 cut(s) | 800, 1183, 1465, 2109, 2434 |
| TseI | GCWGC | 4 cut(s) | 175, 635, 2186, 2556 |
| Tsp45I | GTSAC | 5 cut(s) | 800, 1183, 1465, 2109, 2434 |
| TspGWI | ACGGA | 1 cut(s) | 2577 |
| TspMI | CCCGGG | 2 cut(s) | 126, 1068 |
| TspRI | CASTG | 5 cut(s) | 953, 1373, 1708, 1747, 2188 |
| Vha464I | CTTAAG | 1 cut(s) | 1964 |
| VpaK11BI | GGWCC | 6 cut(s) | 49, 412, 511, 560, 1643, 1721 |
| XapI | RAATTY | 4 cut(s) | 1390, 1552, 2009, 2069 |
| XceI | RCATGY | 1 cut(s) | 2102 |
| XmaI | CCCGGG | 2 cut(s) | 126, 1068 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2478 |
| XspI | CTAG | 2 cut(s) | 45, 870 |
| ZraI | GACGTC | 2 cut(s) | 228, 453 |