Rw5G033890

XS domain

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
57832126 .. 57837174
5049 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G033890.1

Sequence Viewer

Length: 3258 bp
ATGAAGAAGCGGAGGTATTGTGACTTTGCGGGTCGGTCTTCGACTAACGACGGTGAGACGACGGAAGGAGACCGACGTTCGTACTCGGGTCGGGTTTCGGGTTCGGACCAAACCGAAAGAGAGTACTTCGAAGACGACGGCGGTACGGCTAGGCAACCGTTGAAACCGTCGCAGACGCATTTGAGCGGCGGCTTGCGTCAATGCGAATCACTGTCGATGAAGTTTCAGTGGAACAATCTGCTGGCCCGGAATCCGAATCCGGGTTCTAACCCGAGAAAGGCTCCGGGTCTGAACCGACCCGACTTGGATTATAGCAACCGGAGTGGTAGTTATAGACTGGATTATGAAATGGGTTATGGCGGAAGGGGTTTGGGTGTGGACCAGAGACAGCAGTATGGGCATTTTGATCATCGTGGGTTCACGTCGCCATTGCCGAAATCCCATCTTGGTGGTCTCCAAGAAAACGAGGAGGACCACCGCCCAATCCCATATGCGACTCTGGAAGACGAGCCCAACTTTACTTCTGGAACTGGGTATTCATCAATGGAGGGTTTTGGCGGCGTTCGAGATGAATATGACAGAAGCAGAGCAATGGCTGGGTTGCCAATAGGTCACCCGCCTAGACAGAATGAGTTGGTGGACTATGGAGGTTCACCAATTGCTTCGAGTGAGGGTTTTCGCGGGGAGTTCATTAGAAGCAGAGAAATGGGCCATGGTGGATATTCTCAAGGTCAAACAGCGAGAGACGATGAGTTGGTGGACAATGCAGGTGGTGCATCAGAAGCTTTGAATGAGGGTTTTCGCGGCAGAAGCAGAGCAATGGCTGAGGGGCCTGTTGGCAGCCATGCTGGATATTCTCAAGGACTTACGCCAAGACACTCATATGGTGAACTCCCATTTGCTTTGAATGAGGGTTTTCGCGGTTCGGATGAGTTTAACAAAAGCAGAGCAATGGCTGAGGGGCCTATTGGCCATGGTGGATATTCTCATGGTCAAACACCAAGAAAGAATGAGTTGGTGCACCCCAGGTGGGCTCAGCAGAGTCCGAAAGAGGAAATGGGTAGGGACTACAAGGTTCCTGGAATGAAAAGAAATGACAATGGTGACATGGATGCCTTGTTCCTTCTTGACTTGCTCTATAAAAAGATGGCTACTGTTGGAGAAGACTCAAGGCCTCCAAGTCATTTGACGCCAAGCGTTGTTGATTCCGTTGTGTACAGGGTTGGTGGTAGCAATGGCTCTGATGGAGCAGGCACTCATGAGAATTGCCAGTTGGACCAATATCATGATTATATGGAACCAACAAATGTTTTCCCCAACCATCAATCTACAAGTGAACCATCAATCCCCTGCTATGATGAAGTTTTGGGTTCTTCTAATTCAAGAACAGAGGTGTGCCGGAACAATGAAACCCAGGGCTTCAGATTAGGAGTAGATGTTGGTCATGAAAGAGAGGTCGAGCCTTTATCATATGAAGGTAACCGAGAGAGACTGGTTCTGCCTGATGAAGATCAAGGCTTGCTCGAGGCTTATGGTGGTTGCCAACAGAGGTTGGCAGCAGCCGAAAGCCTGGCATCCATGACCCCTCTGGGAAGGTGGGCATTGAGAAAAGTTGCCATGAAGGAGCAACAATCCGGCAATCACTCAAAGTCTAAGTTCTTCCCTGATTTGAACCCCTCTTGTAATGTACAGAACTCGAGCTATGAAGTTGACATGCAGTTGACTACTACTGACGATATGCAGCAGCAATATGCTAACGAAGATATTCAACAATATGCTGCTACCTGTGGAGAGGATCATTGGAACATGGAGCAAAATGTGATCTGTGGAGATGGTCAATGGAACATTGACCAAGGTGTGACCCGTGCAGTGGATCAAAGGAACACTAAACAAGGTTCCATTGACCAAGGTGTGACCTGTGGGGTGGATCAAAGGAACATTGCACAGGGTGTGACCTCTGGAGAGGATCAATGTAACATCCATCGAGGTGTGATCTCCGTAGGGGATCAATGGAACAATGATCAAGGTGTGACAACCTATGGAGAGCAACAATGGTGTATGGACAATGGAGGGGAGCAATGGAACAATGATCAAGGCGTCACAACCTCTGGAGAGCAACAGTGGCGTATGAACTATGGAGAGGACCAATGGAATGCTGAGCATATCAACAACCTGAATTCTGACAGTTTGTTACCGAATTCTGAACTGCCAGCATCTACGCAAGAGCATTATGGCGAACAATCCAAATCTGCTAGGATACATGTAAAGGAGCGTTTGGGACCTCCCAAATTATCAACTGGAAGCATAAAAACGCGTTTGAGACCACCTATGAAATCACCTGGCAGTGTGAAGATGCGTTTGGGGCCTTCTGCAAATGATCCTAATATCAACATTTTAGATCCTAATATCAACATTTTAGGTTTCAAGCCTCGAGAACAATACAAATCTCGAATAAGAAAAACAGATGACCTCAGTGGAAGTATTCATCCTGAAGGGGATGGAATTCCAAAAGCTAAGACTGATGCTGCCGCTGGGAGCATTCATCCTCAGGCGAGTGCTCTTCCACAAGTCAAGACGGATGGTTTTATTGGAAGCATTCATCCTCAAGGGGGTGCTCATTCAATAGTTAAGACAGATGCTACTGGAAGCATTCATCCTCAAGGGAATGGTATTCCAAATGTTAAGAAAGGTGATTTTAATGGAAGCATTCGTCCTCAAGGGGCTGGTCTTTCAAAAGTTGATGTGAGAGCTGCAAAGAAAGAACCGCCTGAAGACTCTAAGGAGTTTAAGCAGCTGGTAGATGATGCCTTCATTAAGTTCATTAACATTTTGATTGAGAACCCACCTCAAAGAAGGAAAATCATGGAAGGAAAAGGAGGAAAGTGTTGCGTGTGTGCCAGCAATTCCAAAGAGTTTGTAGAAACGGCAACCTTAGCAAGGCATGCCTTCTTATCGCCAAAGGTTGGTTTCAAAGCAGAACACCTGGGCTTTCATAAAGCACTTTGTGTGCTCTTGGGATGGGACAGTACAGCAGTCTCAAACACTAGGTGGGTTCAGCGGAACTTGCCAGATGCAGAATCCTTGGCTCTGAAGGAGGACCTAGTTATCTGGCCTCCTGTTGTTGTCATACACAATAGTTCTGTAGCAGATAAAAATCCTGAAGATGAAAGGCTGACGGTAAATGTTGAAGTTCTAGAGGCTATTCTTACAAGTAAGTGTCATCAAGTCATTGGGGGTTTTTCCCACATATTTCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1085

Amino Acids

119.42

Weight (kDa)

5.69

Isoelectric Point (pI)

42.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014702)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 758
Acc36I ACCTGC 1 cut(s) 758
AccB7I CCANNNNNTGG 1 cut(s) 2963
AccBSI CCGCTC 1 cut(s) 186
AccII CGCG 4 cut(s) 681, 804, 921, 2314
AclWI GGATC 7 cut(s) 1803, 1881, 1935, 1974, 2013, 2372, 2393
AcoI YGGCCR 1 cut(s) 970
AcsI RAATTY 3 cut(s) 2176, 2197, 2502
AcuI CTGAAG 5 cut(s) 1405, 2511, 2790, 3110, 3180
AcyI GRCGYC 2 cut(s) 1190, 2097
AdeI CACNNNGTG 3 cut(s) 1949, 3005, 3048
AfaI GTAC 6 cut(s) 83, 125, 145, 1217, 1689, 3028
AfiI CCNNNNNNNGG 7 cut(s) 260, 277, 1030, 1870, 2609, 2937, 2963
AflIII ACRYGT 2 cut(s) 2260, 2312
AjiI CACGTC 1 cut(s) 423
AjnI CCWGG 6 cut(s) 1025, 1078, 1413, 1569, 2338, 2982
AjuI GAANNNNNNNTTGG 4 cut(s) 1256, 1288, 2342, 2374
AloI GAACNNNNNNTCC 4 cut(s) 1103, 1135, 1329, 1361
AluBI AGCT 5 cut(s) 785, 1701, 2513, 2750, 2794
AluI AGCT 5 cut(s) 785, 1701, 2513, 2750, 2794
Alw21I GWGCWC 4 cut(s) 1023, 2560, 2617, 3012
Alw26I GTCTC 8 cut(s) 50, 63, 379, 458, 738, 1483, 2314, 3040
Alw44I GTGCAC 1 cut(s) 1019
AlwI GGATC 7 cut(s) 1803, 1881, 1935, 1974, 2013, 2372, 2393
Ama87I CYCGRG 5 cut(s) 85, 271, 1523, 1696, 2430
AoxI GGCC 8 cut(s) 243, 709, 830, 962, 970, 1172, 2363, 3110
ApaLI GTGCAC 1 cut(s) 1019
ApeKI GCWGC 9 cut(s) 840, 1556, 1559, 1741, 1744, 1778, 2525, 2750, 2791
ApoI RAATTY 3 cut(s) 2176, 2197, 2502
Asp700I GAANNNNTTC 1 cut(s) 1764
AsuC2I CCSGG 3 cut(s) 247, 261, 285
AsuHPI GGTGA 7 cut(s) 65, 605, 645, 899, 1115, 2328, 2702
AsuII TTCGAA 1 cut(s) 129
AvaI CYCGRG 5 cut(s) 85, 271, 1523, 1696, 2430
AvaII GGWCC 7 cut(s) 106, 379, 472, 1276, 2143, 2279, 3097
AxyI CCTNAGG 1 cut(s) 2547
BaeGI GKGCMC 1 cut(s) 1023
BalI TGGCCA 1 cut(s) 972
BanII GRGCYC 2 cut(s) 513, 1036
BbsI GAAGAC 5 cut(s) 30, 138, 510, 1170, 2778
Bbv12I GWGCWC 4 cut(s) 1023, 2560, 2617, 3012
BbvCI CCTCAGC 2 cut(s) 825, 957
BbvI GCAGC 9 cut(s) 852, 1568, 1571, 1753, 1756, 1765, 2512, 2737, 2803
BceAI ACGGC 3 cut(s) 154, 162, 2940
BciT130I CCWGG 6 cut(s) 1027, 1080, 1415, 1571, 2340, 2984
BciVI GTATCC 1 cut(s) 2250
BclI TGATCA 3 cut(s) 406, 2020, 2089
BcnI CCSGG 3 cut(s) 247, 261, 285
BcoDI GTCTC 8 cut(s) 50, 63, 379, 458, 738, 1483, 2314, 3040
BfaI CTAG 6 cut(s) 150, 621, 2253, 3045, 3101, 3194
BfmI CTRYAG 1 cut(s) 3141
BfuAI ACCTGC 1 cut(s) 758
BfuI GTATCC 1 cut(s) 2250
BlpI GCTNAGC 2 cut(s) 1035, 2157
BmcAI AGTACT 1 cut(s) 125
Bme1390I CCNGG 9 cut(s) 247, 261, 285, 1027, 1080, 1415, 1571, 2340, 2984
Bme18I GGWCC 7 cut(s) 106, 379, 472, 1276, 2143, 2279, 3097
BmeT110I CYCGRG 5 cut(s) 85, 271, 1523, 1696, 2430
BmgBI CACGTC 1 cut(s) 423
BmiI GGNNCC 8 cut(s) 282, 831, 963, 1077, 1299, 1897, 2280, 2364
BmrFI CCNGG 9 cut(s) 247, 261, 285, 1027, 1080, 1415, 1571, 2340, 2984
BmrI ACTGGG 1 cut(s) 540
BmsI GCATC 9 cut(s) 785, 1102, 1583, 2222, 2343, 2512, 2626, 2794, 3061
BmuI ACTGGG 1 cut(s) 540
BpiI GAAGAC 5 cut(s) 30, 138, 510, 1170, 2778
BplI GAGNNNNNCTC 2 cut(s) 265, 297
BpmI CTGGAG 2 cut(s) 1980, 2130
Bpu10I CCTNAGC 3 cut(s) 825, 957, 2932
Bpu1102I GCTNAGC 2 cut(s) 1035, 2157
Bpu14I TTCGAA 1 cut(s) 129
BpuEI CTTGAG 6 cut(s) 711, 843, 1153, 2589, 2643, 2700
BpuMI CCSGG 3 cut(s) 247, 261, 285
BsaBI GATNNNNATC 2 cut(s) 1509, 3153
BsaHI GRCGYC 2 cut(s) 1190, 2097
BsaI GGTCTC 3 cut(s) 63, 458, 2314
BsaJI CCNNGG 9 cut(s) 712, 973, 1025, 1413, 1414, 1852, 1906, 2983, 3081
BsaWI WCCGGW 1 cut(s) 318
BsaXI ACNNNNNCTCC 5 cut(s) 34, 313, 343, 1422, 1452
Bsc4I CCNNNNNNNGG 7 cut(s) 260, 277, 1030, 1870, 2609, 2937, 2963
Bse1I ACTGG 6 cut(s) 342, 535, 1270, 1497, 2302, 2647
Bse21I CCTNAGG 1 cut(s) 2547
Bse3DI GCAATG 7 cut(s) 428, 597, 825, 957, 1240, 1938, 2084
Bse8I GATNNNNATC 2 cut(s) 1509, 3153
BseBI CCWGG 6 cut(s) 1027, 1080, 1415, 1571, 2340, 2984
BseDI CCNNGG 9 cut(s) 712, 973, 1025, 1413, 1414, 1852, 1906, 2983, 3081
BseJI GATNNNNATC 2 cut(s) 1509, 3153
BseLI CCNNNNNNNGG 7 cut(s) 260, 277, 1030, 1870, 2609, 2937, 2963
BseMI GCAATG 7 cut(s) 428, 597, 825, 957, 1240, 1938, 2084
BseMII CTCAG 6 cut(s) 816, 948, 1049, 2148, 2485, 2561
BseNI ACTGG 6 cut(s) 342, 535, 1270, 1497, 2302, 2647
BseRI GAGGAG 1 cut(s) 482
BseSI GKGCMC 1 cut(s) 1023
BseXI GCAGC 9 cut(s) 852, 1568, 1571, 1753, 1756, 1765, 2512, 2737, 2803
BseYI CCCAGC 2 cut(s) 596, 2531
BsgI GTGCAG 1 cut(s) 1887
Bsh1236I CGCG 4 cut(s) 681, 804, 921, 2314
BshFI GGCC 8 cut(s) 245, 711, 832, 964, 972, 1174, 2365, 3112
BsiHKAI GWGCWC 4 cut(s) 1023, 2560, 2617, 3012
BsiHKCI CYCGRG 5 cut(s) 85, 271, 1523, 1696, 2430
BsiSI CCGG 6 cut(s) 247, 260, 284, 319, 1399, 1635
BslFI GGGAC 3 cut(s) 1079, 2292, 3035
BslI CCNNNNNNNGG 7 cut(s) 260, 277, 1030, 1870, 2609, 2937, 2963
BsmAI GTCTC 8 cut(s) 50, 63, 379, 458, 738, 1483, 2314, 3040
BsmBI CGTCTC 2 cut(s) 50, 738
BsmFI GGGAC 3 cut(s) 1079, 2292, 3035
BsmI GAATGC 5 cut(s) 2158, 2538, 2595, 2649, 2706
BsnI GGCC 8 cut(s) 245, 711, 832, 964, 972, 1174, 2365, 3112
Bso31I GGTCTC 3 cut(s) 63, 458, 2314
BsoBI CYCGRG 5 cut(s) 85, 271, 1523, 1696, 2430
Bsp119I TTCGAA 1 cut(s) 129
Bsp1286I GDGCHC 6 cut(s) 513, 1023, 1036, 2560, 2617, 3012
Bsp1407I TGTACA 2 cut(s) 1215, 1687
Bsp1720I GCTNAGC 2 cut(s) 1035, 2157
Bsp19I CCATGG 2 cut(s) 712, 973
BspANI GGCC 8 cut(s) 245, 711, 832, 964, 972, 1174, 2365, 3112
BspCNI CTCAG 6 cut(s) 817, 949, 1048, 2149, 2484, 2560
BspFNI CGCG 4 cut(s) 681, 804, 921, 2314
BspHI TCATGA 3 cut(s) 1258, 1285, 1444
BspLI GGNNCC 8 cut(s) 282, 831, 963, 1077, 1299, 1897, 2280, 2364
BspMI ACCTGC 1 cut(s) 758
BspPI GGATC 7 cut(s) 1803, 1881, 1935, 1974, 2013, 2372, 2393
BspQI GCTCTTC 1 cut(s) 2565
BspT104I TTCGAA 1 cut(s) 129
BspTNI GGTCTC 3 cut(s) 63, 458, 2314
BsrBI CCGCTC 1 cut(s) 186
BsrDI GCAATG 7 cut(s) 428, 597, 825, 957, 1240, 1938, 2084
BsrGI TGTACA 2 cut(s) 1215, 1687
BsrI ACTGG 6 cut(s) 342, 535, 1270, 1497, 2302, 2647
BssECI CCNNGG 9 cut(s) 712, 973, 1025, 1413, 1414, 1852, 1906, 2983, 3081
BssNI GRCGYC 2 cut(s) 1190, 2097
BssT1I CCWWGG 5 cut(s) 712, 973, 1852, 1906, 3081
Bst2UI CCWGG 6 cut(s) 1027, 1080, 1415, 1571, 2340, 2984
Bst4CI ACNGT 9 cut(s) 53, 159, 168, 213, 1156, 2121, 2186, 3026, 3178
Bst6I CTCTTC 1 cut(s) 2565
BstACI GRCGYC 2 cut(s) 1190, 2097
BstAPI GCANNNNNTGC 2 cut(s) 773, 2942
BstAUI TGTACA 2 cut(s) 1215, 1687
BstBI TTCGAA 1 cut(s) 129
BstC8I GCNNGC 7 cut(s) 194, 243, 1252, 1520, 2211, 2899, 2943
BstDSI CCRYGG 2 cut(s) 712, 973
BstEII GGTNACC 2 cut(s) 611, 1478
BstENI CCTNNNNNAGG 1 cut(s) 2935
BstFNI CGCG 4 cut(s) 681, 804, 921, 2314
BstMAI GTCTC 8 cut(s) 50, 63, 379, 458, 738, 1483, 2314, 3040
BstMWI GCNNNNNNNGC 9 cut(s) 397, 773, 782, 810, 2122, 2362, 2933, 2942, 3064
BstNI CCWGG 6 cut(s) 1027, 1080, 1415, 1571, 2340, 2984
BstNSI RCATGY 3 cut(s) 1717, 2264, 2945
BstPI GGTNACC 2 cut(s) 611, 1478
BstSCI CCNGG 9 cut(s) 245, 259, 283, 1025, 1078, 1413, 1569, 2338, 2982
BstSFI CTRYAG 1 cut(s) 3141
BstSLI GKGCMC 1 cut(s) 1023
BstUI CGCG 4 cut(s) 681, 804, 921, 2314
BstV1I GCAGC 9 cut(s) 852, 1568, 1571, 1753, 1756, 1765, 2512, 2737, 2803
BstV2I GAAGAC 5 cut(s) 30, 138, 510, 1170, 2778
BstX2I RGATCY 1 cut(s) 2398
BstXI CCANNNNNNTGG 1 cut(s) 449
BstYI RGATCY 1 cut(s) 2398
Bsu36I CCTNAGG 1 cut(s) 2547
BsuI GTATCC 1 cut(s) 2250
BsuRI GGCC 8 cut(s) 245, 711, 832, 964, 972, 1174, 2365, 3112
BtgI CCRYGG 2 cut(s) 712, 973
BtrI CACGTC 1 cut(s) 423
BtsI GCAGTG 2 cut(s) 1875, 2350
BtsIMutI CAGTG 6 cut(s) 209, 233, 1875, 2126, 2350, 2479
BveI ACCTGC 1 cut(s) 758
Cac8I GCNNGC 7 cut(s) 194, 243, 1252, 1520, 2211, 2899, 2943
CciI TCATGA 3 cut(s) 1258, 1285, 1444
CseI GACGC 4 cut(s) 184, 185, 1198, 2086
Csp6I GTAC 6 cut(s) 82, 124, 144, 1216, 1688, 3027
CspCI CAANNNNNGTGG 4 cut(s) 304, 339, 751, 786
CviQI GTAC 6 cut(s) 82, 124, 144, 1216, 1688, 3027
DraIII CACNNNGTG 3 cut(s) 1949, 3005, 3048
EaeI YGGCCR 1 cut(s) 970
Eam1104I CTCTTC 1 cut(s) 2565
EarI CTCTTC 1 cut(s) 2565
EciI GGCGGA 1 cut(s) 375
Eco130I CCWWGG 5 cut(s) 712, 973, 1852, 1906, 3081
Eco147I AGGCCT 1 cut(s) 1174
Eco24I GRGCYC 2 cut(s) 513, 1036
Eco31I GGTCTC 3 cut(s) 63, 458, 2314
Eco47I GGWCC 7 cut(s) 106, 379, 472, 1276, 2143, 2279, 3097
Eco57I CTGAAG 5 cut(s) 1405, 2511, 2790, 3110, 3180
Eco81I CCTNAGG 1 cut(s) 2547
Eco88I CYCGRG 5 cut(s) 85, 271, 1523, 1696, 2430
Eco91I GGTNACC 2 cut(s) 611, 1478
EcoNI CCTNNNNNAGG 1 cut(s) 2935
EcoO109I RGGNCCY 5 cut(s) 830, 962, 2279, 2363, 3097
EcoO65I GGTNACC 2 cut(s) 611, 1478
EcoRI GAATTC 3 cut(s) 2176, 2197, 2502
EcoRII CCWGG 6 cut(s) 1025, 1078, 1413, 1569, 2338, 2982
EcoT14I CCWWGG 5 cut(s) 712, 973, 1852, 1906, 3081
EcoT38I GRGCYC 2 cut(s) 513, 1036
ErhI CCWWGG 5 cut(s) 712, 973, 1852, 1906, 3081
Esp3I CGTCTC 2 cut(s) 50, 738
FaqI GGGAC 3 cut(s) 1079, 2292, 3035
FauI CCCGC 3 cut(s) 22, 624, 674
FauNDI CATATG 3 cut(s) 490, 883, 1471
FbaI TGATCA 3 cut(s) 406, 2020, 2089
FriOI GRGCYC 2 cut(s) 513, 1036
FspBI CTAG 6 cut(s) 150, 621, 2253, 3045, 3101, 3194
GsaI CCCAGC 2 cut(s) 600, 2535
GsuI CTGGAG 2 cut(s) 1980, 2130
HaeIII GGCC 8 cut(s) 245, 711, 832, 964, 972, 1174, 2365, 3112
HapII CCGG 6 cut(s) 247, 260, 284, 319, 1399, 1635
HgaI GACGC 4 cut(s) 184, 185, 1198, 2086
Hin1I GRCGYC 2 cut(s) 1190, 2097
HincII GTYRAC 2 cut(s) 1711, 1722
HindII GTYRAC 2 cut(s) 1711, 1722
HindIII AAGCTT 1 cut(s) 783
HinfI GANTC 9 cut(s) 206, 250, 256, 496, 1042, 1166, 1205, 2774, 3077
HpaII CCGG 6 cut(s) 247, 260, 284, 319, 1399, 1635
HphI GGTGA 7 cut(s) 65, 605, 645, 899, 1115, 2328, 2702
Hpy99I CGWCG 6 cut(s) 53, 64, 78, 140, 172, 427
HpyCH4III ACNGT 9 cut(s) 53, 159, 168, 213, 1156, 2121, 2186, 3026, 3178
HpyCH4IV ACGT 2 cut(s) 76, 422
HpyF10VI GCNNNNNNNGC 9 cut(s) 397, 773, 782, 810, 2122, 2362, 2933, 2942, 3064
HpySE526I ACGT 2 cut(s) 76, 422
Hsp92I GRCGYC 2 cut(s) 1190, 2097
Ksp22I TGATCA 3 cut(s) 406, 2020, 2089
LguI GCTCTTC 1 cut(s) 2565
LmnI GCTCC 7 cut(s) 286, 1247, 1624, 1810, 2074, 2269, 2535
Lsp1109I GCAGC 9 cut(s) 852, 1568, 1571, 1753, 1756, 1765, 2512, 2737, 2803
LweI GCATC 9 cut(s) 785, 1102, 1583, 2222, 2343, 2512, 2626, 2794, 3061
MaeI CTAG 6 cut(s) 150, 621, 2253, 3045, 3101, 3194
MaeII ACGT 2 cut(s) 76, 422
MbiI CCGCTC 1 cut(s) 186
MfeI CAATTG 1 cut(s) 657
MflI RGATCY 1 cut(s) 2398
MhlI GDGCHC 6 cut(s) 513, 1023, 1036, 2560, 2617, 3012
MlsI TGGCCA 1 cut(s) 972
MluCI AATT 8 cut(s) 657, 1264, 1378, 2176, 2197, 2288, 2502, 2902
MluI ACGCGT 1 cut(s) 2312
MluNI TGGCCA 1 cut(s) 972
MlyI GAGTC 4 cut(s) 490, 1051, 1160, 2768
MmeI TCCRAC 2 cut(s) 1138, 1254
Mox20I TGGCCA 1 cut(s) 972
MroXI GAANNNNTTC 1 cut(s) 1764
MscI TGGCCA 1 cut(s) 972
MseI TTAA 7 cut(s) 936, 2628, 2682, 2697, 2787, 2814, 2823
MslI CAYNNNNRTG 3 cut(s) 447, 882, 1986
Msp20I TGGCCA 1 cut(s) 972
MspA1I CMGCKG 3 cut(s) 2531, 2794, 3058
MspI CCGG 6 cut(s) 247, 260, 284, 319, 1399, 1635
MspR9I CCNGG 9 cut(s) 247, 261, 285, 1027, 1080, 1415, 1571, 2340, 2984
MunI CAATTG 1 cut(s) 657
Mva1269I GAATGC 5 cut(s) 2158, 2538, 2595, 2649, 2706
MvaI CCWGG 6 cut(s) 1027, 1080, 1415, 1571, 2340, 2984
MvnI CGCG 4 cut(s) 681, 804, 921, 2314
MwoI GCNNNNNNNGC 9 cut(s) 397, 773, 782, 810, 2122, 2362, 2933, 2942, 3064
NciI CCSGG 3 cut(s) 247, 261, 285
NcoI CCATGG 2 cut(s) 712, 973
NdeI CATATG 3 cut(s) 490, 883, 1471
NlaIV GGNNCC 8 cut(s) 282, 831, 963, 1077, 1299, 1897, 2280, 2364
NmuCI GTSAC 8 cut(s) 20, 611, 1103, 1858, 1912, 1951, 2029, 2098
NspI RCATGY 3 cut(s) 1717, 2264, 2945
NspV TTCGAA 1 cut(s) 129
PaeI GCATGC 1 cut(s) 2945
PaeR7I CTCGAG 3 cut(s) 1523, 1696, 2430
PagI TCATGA 3 cut(s) 1258, 1285, 1444
PaqCI CACCTGC 1 cut(s) 758
PasI CCCWGGG 1 cut(s) 1414
PceI AGGCCT 1 cut(s) 1174
PciI ACATGT 1 cut(s) 2260
PciSI GCTCTTC 1 cut(s) 2565
PcsI WCGNNNNNNNCGW 1 cut(s) 431
PctI GAATGC 5 cut(s) 2158, 2538, 2595, 2649, 2706
PdmI GAANNNNTTC 1 cut(s) 1764
PfeI GAWTC 5 cut(s) 206, 250, 256, 1205, 3077
PflMI CCANNNNNTGG 1 cut(s) 2963
PfoI TCCNGGA 1 cut(s) 1078
PleI GAGTC 4 cut(s) 490, 1050, 1160, 2768
PpsI GAGTC 4 cut(s) 490, 1050, 1160, 2768
PpuMI RGGWCCY 2 cut(s) 2279, 3097
PscI ACATGT 1 cut(s) 2260
Psp5II RGGWCCY 2 cut(s) 2279, 3097
Psp6I CCWGG 6 cut(s) 1025, 1078, 1413, 1569, 2338, 2982
PspEI GGTNACC 2 cut(s) 611, 1478
PspFI CCCAGC 2 cut(s) 596, 2531
PspGI CCWGG 6 cut(s) 1025, 1078, 1413, 1569, 2338, 2982
PspN4I GGNNCC 8 cut(s) 282, 831, 963, 1077, 1299, 1897, 2280, 2364
PspPPI RGGWCCY 2 cut(s) 2279, 3097
PspXI VCTCGAGB 2 cut(s) 1523, 1696
PsuI RGATCY 1 cut(s) 2398
PvuII CAGCTG 1 cut(s) 2794
RsaI GTAC 6 cut(s) 83, 125, 145, 1217, 1689, 3028
RsaNI GTAC 6 cut(s) 82, 124, 144, 1216, 1688, 3027
RseI CAYNNNNRTG 3 cut(s) 447, 882, 1986
SapI GCTCTTC 1 cut(s) 2565
SaqAI TTAA 7 cut(s) 936, 2628, 2682, 2697, 2787, 2814, 2823
ScaI AGTACT 1 cut(s) 125
SchI GAGTC 4 cut(s) 490, 1051, 1160, 2768
ScrFI CCNGG 9 cut(s) 247, 261, 285, 1027, 1080, 1415, 1571, 2340, 2984
SduI GDGCHC 6 cut(s) 513, 1023, 1036, 2560, 2617, 3012
SfaNI GCATC 9 cut(s) 785, 1102, 1583, 2222, 2343, 2512, 2626, 2794, 3061
SfcI CTRYAG 1 cut(s) 3141
Sfr274I CTCGAG 3 cut(s) 1523, 1696, 2430
SfuI TTCGAA 1 cut(s) 129
SinI GGWCC 7 cut(s) 106, 379, 472, 1276, 2143, 2279, 3097
SlaI CTCGAG 3 cut(s) 1523, 1696, 2430
SmiMI CAYNNNNRTG 3 cut(s) 447, 882, 1986
SmlI CTYRAG 9 cut(s) 726, 858, 1168, 1523, 1696, 2430, 2604, 2658, 2715
SmoI CTYRAG 9 cut(s) 726, 858, 1168, 1523, 1696, 2430, 2604, 2658, 2715
SphI GCATGC 1 cut(s) 2945
Sse9I AATT 8 cut(s) 657, 1264, 1378, 2176, 2197, 2288, 2502, 2902
SseBI AGGCCT 1 cut(s) 1174
SspMI CTAG 6 cut(s) 150, 621, 2253, 3045, 3101, 3194
StuI AGGCCT 1 cut(s) 1174
StyD4I CCNGG 9 cut(s) 245, 259, 283, 1025, 1078, 1413, 1569, 2338, 2982
StyI CCWWGG 5 cut(s) 712, 973, 1852, 1906, 3081
TaaI ACNGT 9 cut(s) 53, 159, 168, 213, 1156, 2121, 2186, 3026, 3178
TaiI ACGT 2 cut(s) 79, 425
TaqII GACCGA 2 cut(s) 24, 87
TasI AATT 8 cut(s) 657, 1264, 1378, 2176, 2197, 2288, 2502, 2902
TatI WGTACW 4 cut(s) 123, 1215, 1687, 3026
TauI GCSGC 5 cut(s) 189, 192, 561, 807, 2531
TfiI GAWTC 5 cut(s) 206, 250, 256, 1205, 3077
Tru1I TTAA 7 cut(s) 936, 2628, 2682, 2697, 2787, 2814, 2823
Tru9I TTAA 7 cut(s) 936, 2628, 2682, 2697, 2787, 2814, 2823
TscAI CASTG 6 cut(s) 216, 233, 1875, 2126, 2350, 2479
TseFI GTSAC 8 cut(s) 20, 611, 1103, 1858, 1912, 1951, 2029, 2098
TseI GCWGC 9 cut(s) 840, 1556, 1559, 1741, 1744, 1778, 2525, 2750, 2791
Tsp45I GTSAC 8 cut(s) 20, 611, 1103, 1858, 1912, 1951, 2029, 2098
TspGWI ACGGA 4 cut(s) 77, 1198, 1987, 2591
TspRI CASTG 6 cut(s) 216, 233, 1875, 2126, 2350, 2479
Van91I CCANNNNNTGG 1 cut(s) 2963
VneI GTGCAC 1 cut(s) 1019
VpaK11BI GGWCC 7 cut(s) 106, 379, 472, 1276, 2143, 2279, 3097
XagI CCTNNNNNAGG 1 cut(s) 2935
XapI RAATTY 3 cut(s) 2176, 2197, 2502
XbaI TCTAGA 1 cut(s) 3193
XceI RCATGY 3 cut(s) 1717, 2264, 2945
XcmI CCANNNNNNNNNTGG 1 cut(s) 1585
XhoI CTCGAG 3 cut(s) 1523, 1696, 2430
XmnI GAANNNNTTC 1 cut(s) 1764
XspI CTAG 6 cut(s) 150, 621, 2253, 3045, 3101, 3194
ZrmI AGTACT 1 cut(s) 125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.