Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0006280

Physical Location & Seq

Genomic Coordinates Forward (+)

14830499 .. 14833896

Gene Structure 3398 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G160300.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1104 bp

ATGGGTTCAACGAAACCTTATTTGGCAGTAATTTTCATACAGATAATATATGCAGGCATGATCTTGCTCTCTAAAGCTGCTTTCAATGGTGGTATGAACAGCTACGTGTTCGTCTTCTACAGACAAATGGCAGGATCTCTGTTCATGTCCCCTCTTGCCATGATCTTTGAAAGGAAAAGTGCAACGCCTCTTTCTGTTGTGACCTTCTGCAAGATTTTTATGCTGTCTTTTCTGGGGATAACTTTGGCTATAAATGCTTATTGCATTGCCCTTACCTACACATCAGCGACTTTGGGTGCAGCATCCATTAACTGTCTACCTGTTGCAACATTTTTCTTTGCAGTTTTGCTCAGGATGGAGAAAGTGAAGATAAAGACAGCAGCTGGGATTGCAAAGGTTGCAGGCCTGGTAGTGAGCATGATAGGTGTGGCAGTCCTTTCTTTTTACAAGGGACCCCAGTTGAAGCCTTTTTTACATCATCACCTCTTGCAGTCTCATAACAGCCATCAAGACCAACAACAAGCTCATGCTTCTTCTTCTGGGCACAGATGGATGATTGGTTGTTTTCTCCTGCTCGTTTCTATTATTTGTTGGAGCTTGTGGCTTGTACTTCAGGCTCAACTTCTTGTAAAGTACCCTGCAAAGCTACGCTTCACAAGTCTACAATGCCTGTCAAGTGCAGCACAGTCATTTGTTGTTGCCATCGCTTTGGAAAGAGATCCTAGTCAGTGGAATCTGGGCTGGAACATTAATTTACTTGCAATTGCTTATTGTGGCATTATGGTGACCGGCGTTTCATACTACTTGCAAGCATATGTGATTGAGAAGAAGGGGCCAGTTTTCCAAGCCATGTCACAGCCATTAAATCTCATCATCACAGTTATTGGCTCGGTGTTGCTCTTAGGGGAGGCCATCAGTTTGGGAAGTGTTTTAGGTGGAATCCTGATGGCTGCGAGCCTTTACAGTGTTTTGTGGGGAAAAAGCAAAGAGCTGAAGAGCATGGAAAATCGTACTTGCTTATCAGTTCCAGTTCAACCTGAAAAGGAACGTGCGCAGCTGAAAGAGGCAGAGGCTACCATCACTGAACCAACCTTGTTTGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EamA

Protein Analysis

368

Amino Acids

40.14

Weight (kDa)

9.39

Isoelectric Point (pI)

41.54

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006280)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64700 AT5G64700
fragaria_vesca	FvH4_1g23640 FvH4_1g23640
prunus_persica	Prupe.6G160300_v2.0.a1 Prupe.6G160300_v2.0.a1 Prupe.6G160300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0119241
rosa_laevigata	RLG00000018458 RLG00000034036
rosa_multiflora	Rmu_sc0001140.1_g000010 Rmu_sc0004760.1_g000012 Rmu_sc0007618.1_g000001
rosa_roxburghii	Rroxscaffold_1G00039430 Rroxscaffold_2G00124410
rosa_rugosa	Rorug02G0221200 Rorug05G0190500.1
rosa_samantha	Rh2AG279200 Rh2BG290000 Rh2DG285100 Rh2DG304100 Rh5AG276500 Rh5BG281500 Rh5CG313500 Rh5DG289500
rosa_wichuraiana	Rw2G022200 Rw5G026010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1053
AccI	GTMKAC	2 cut(s)	316, 661
AclWI	GGATC	2 cut(s)	142, 713
AcuI	CTGAAG	2 cut(s)	596, 1013
AfaI	GTAC	3 cut(s)	609, 635, 1012
AflIII	ACRYGT	1 cut(s)	105
AgsI	TTSAA	5 cut(s)	9, 85, 170, 463, 1034
AjnI	CCWGG	1 cut(s)	405
AjuI	GAANNNNNNNTTGG	1 cut(s)	37
AluBI	AGCT	8 cut(s)	77, 102, 383, 524, 597, 646, 991, 1057
AluI	AGCT	8 cut(s)	77, 102, 383, 524, 597, 646, 991, 1057
Alw26I	GTCTC	1 cut(s)	498
AlwI	GGATC	2 cut(s)	142, 713
AlwNI	CAGNNNCTG	1 cut(s)	383
AoxI	GGCC	3 cut(s)	403, 833, 909
ApeKI	GCWGC	6 cut(s)	77, 299, 380, 680, 950, 1054
AseI	ATTAAT	1 cut(s)	750
AspLEI	GCGC	1 cut(s)	1054
AspS9I	GGNCC	2 cut(s)	452, 833
AsuHPI	GGTGA	2 cut(s)	473, 796
AvaII	GGWCC	1 cut(s)	452
BaeGI	GKGCMC	1 cut(s)	546
BbsI	GAAGAC	1 cut(s)	106
BbvI	GCAGC	6 cut(s)	64, 311, 392, 692, 937, 1066
BccI	CCATC	7 cut(s)	349, 513, 543, 710, 920, 940, 1085
BciT130I	CCWGG	1 cut(s)	407
BcoDI	GTCTC	1 cut(s)	498
BfaI	CTAG	1 cut(s)	723
BfmI	CTRYAG	1 cut(s)	118
BisI	GCNGC	6 cut(s)	78, 300, 381, 681, 951, 1055
BlsI	GCNGC	6 cut(s)	79, 301, 382, 682, 952, 1056
Bme1390I	CCNGG	1 cut(s)	407
Bme18I	GGWCC	1 cut(s)	452
BmgT120I	GGNCC	2 cut(s)	452, 833
BmiI	GGNNCC	3 cut(s)	453, 454, 834
BmrFI	CCNGG	1 cut(s)	407
BmrI	ACTGGG	1 cut(s)	451
BmsI	GCATC	1 cut(s)	311
BmuI	ACTGGG	1 cut(s)	451
BpiI	GAAGAC	1 cut(s)	106
Bpu10I	CCTNAGC	1 cut(s)	350
BsaAI	YACGTR	1 cut(s)	106
Bse118I	RCCGGY	1 cut(s)	788
Bse1I	ACTGG	3 cut(s)	457, 836, 1028
Bse3DI	GCAATG	1 cut(s)	264
BseBI	CCWGG	1 cut(s)	407
BseGI	GGATG	3 cut(s)	302, 360, 558
BseMI	GCAATG	1 cut(s)	264
BseMII	CTCAG	1 cut(s)	364
BseNI	ACTGG	3 cut(s)	457, 836, 1028
BseSI	GKGCMC	1 cut(s)	546
BseXI	GCAGC	6 cut(s)	64, 311, 392, 692, 937, 1066
BseYI	CCCAGC	1 cut(s)	383
BsgI	GTGCAG	2 cut(s)	318, 699
BshFI	GGCC	3 cut(s)	405, 835, 911
BsiSI	CCGG	1 cut(s)	789
BslFI	GGGAC	2 cut(s)	133, 465
BsmAI	GTCTC	1 cut(s)	498
BsmFI	GGGAC	2 cut(s)	133, 465
BsnI	GGCC	3 cut(s)	405, 835, 911
Bsp1286I	GDGCHC	1 cut(s)	546
Bsp143I	GATC	4 cut(s)	60, 134, 162, 718
BspANI	GGCC	3 cut(s)	405, 835, 911
BspCNI	CTCAG	1 cut(s)	363
BspLI	GGNNCC	3 cut(s)	453, 454, 834
BspPI	GGATC	2 cut(s)	142, 713
BspQI	GCTCTTC	1 cut(s)	989
BsrDI	GCAATG	1 cut(s)	264
BsrFI	RCCGGY	1 cut(s)	788
BsrI	ACTGG	3 cut(s)	457, 836, 1028
BssAI	RCCGGY	1 cut(s)	788
BssMI	GATC	4 cut(s)	60, 134, 162, 718
Bst2UI	CCWGG	1 cut(s)	407
Bst4CI	ACNGT	4 cut(s)	314, 687, 880, 965
Bst6I	CTCTTC	1 cut(s)	989
BstAPI	GCANNNNNTGC	1 cut(s)	398
BstBAI	YACGTR	1 cut(s)	106
BstC8I	GCNNGC	4 cut(s)	55, 403, 810, 955
BstDEI	CTNAG	2 cut(s)	350, 901
BstEII	GGTNACC	1 cut(s)	784
BstF5I	GGATG	3 cut(s)	302, 360, 558
BstHHI	GCGC	1 cut(s)	1054
BstKTI	GATC	4 cut(s)	63, 137, 165, 721
BstMAI	GTCTC	1 cut(s)	498
BstMBI	GATC	4 cut(s)	60, 134, 162, 718
BstMWI	GCNNNNNNNGC	3 cut(s)	254, 389, 398
BstNI	CCWGG	1 cut(s)	407
BstPI	GGTNACC	1 cut(s)	784
BstSCI	CCNGG	1 cut(s)	405
BstSFI	CTRYAG	1 cut(s)	118
BstSLI	GKGCMC	1 cut(s)	546
BstV1I	GCAGC	6 cut(s)	64, 311, 392, 692, 937, 1066
BstV2I	GAAGAC	1 cut(s)	106
BstX2I	RGATCY	2 cut(s)	134, 718
BstXI	CCANNNNNNTGG	2 cut(s)	709, 919
BstYI	RGATCY	2 cut(s)	134, 718
BsuRI	GGCC	3 cut(s)	405, 835, 911
BtgZI	GCGATG	1 cut(s)	688
BtsCI	GGATG	3 cut(s)	302, 360, 558
BtsIMutI	CAGTG	3 cut(s)	734, 970, 1080
Cac8I	GCNNGC	4 cut(s)	55, 403, 810, 955
CaiI	CAGNNNCTG	1 cut(s)	383
CfoI	GCGC	1 cut(s)	1054
Cfr10I	RCCGGY	1 cut(s)	788
Cfr13I	GGNCC	2 cut(s)	452, 833
Csp6I	GTAC	3 cut(s)	608, 634, 1011
CviAII	CATG	7 cut(s)	58, 145, 160, 418, 527, 850, 1000
CviQI	GTAC	3 cut(s)	608, 634, 1011
DdeI	CTNAG	2 cut(s)	350, 901
DpnI	GATC	4 cut(s)	62, 136, 164, 720
DpnII	GATC	4 cut(s)	60, 134, 162, 718
Eam1104I	CTCTTC	1 cut(s)	989
EarI	CTCTTC	1 cut(s)	989
Eco147I	AGGCCT	1 cut(s)	405
Eco47I	GGWCC	1 cut(s)	452
Eco57I	CTGAAG	2 cut(s)	596, 1013
Eco91I	GGTNACC	1 cut(s)	784
EcoO109I	RGGNCCY	1 cut(s)	452
EcoO65I	GGTNACC	1 cut(s)	784
EcoRII	CCWGG	1 cut(s)	405
FaeI	CATG	7 cut(s)	61, 148, 163, 421, 530, 853, 1003
FalI	AAGNNNNNCTT	2 cut(s)	635, 667
FaqI	GGGAC	2 cut(s)	133, 465
FatI	CATG	7 cut(s)	57, 144, 159, 417, 526, 849, 999
FauNDI	CATATG	1 cut(s)	814
FblI	GTMKAC	2 cut(s)	316, 661
Fnu4HI	GCNGC	6 cut(s)	78, 300, 381, 681, 951, 1055
FokI	GGATG	3 cut(s)	289, 367, 565
Fsp4HI	GCNGC	6 cut(s)	78, 300, 381, 681, 951, 1055
FspBI	CTAG	1 cut(s)	723
FspI	TGCGCA	1 cut(s)	1053
GlaI	GCGC	1 cut(s)	1053
GluI	GCNGC	6 cut(s)	78, 300, 381, 681, 951, 1055
GsaI	CCCAGC	1 cut(s)	387
HaeIII	GGCC	3 cut(s)	405, 835, 911
HapII	CCGG	1 cut(s)	789
HhaI	GCGC	1 cut(s)	1054
Hin1II	CATG	7 cut(s)	61, 148, 163, 421, 530, 853, 1003
Hin6I	GCGC	1 cut(s)	1052
HinP1I	GCGC	1 cut(s)	1052
HinfI	GANTC	2 cut(s)	733, 939
HpaII	CCGG	1 cut(s)	789
HphI	GGTGA	2 cut(s)	473, 796
Hpy166II	GTNNAC	2 cut(s)	317, 662
Hpy188III	TCNNGA	3 cut(s)	352, 509, 943
Hpy8I	GTNNAC	2 cut(s)	317, 662
HpyAV	CCTTC	2 cut(s)	214, 823
HpyCH4III	ACNGT	4 cut(s)	314, 687, 880, 965
HpyCH4IV	ACGT	2 cut(s)	105, 1048
HpyF10VI	GCNNNNNNNGC	3 cut(s)	254, 389, 398
HpyF3I	CTNAG	2 cut(s)	350, 901
HpySE526I	ACGT	2 cut(s)	105, 1048
Hsp92II	CATG	7 cut(s)	61, 148, 163, 421, 530, 853, 1003
HspAI	GCGC	1 cut(s)	1052
KflI	GGGWCCC	1 cut(s)	452
Kzo9I	GATC	4 cut(s)	60, 134, 162, 718
LguI	GCTCTTC	1 cut(s)	989
LmnI	GCTCC	1 cut(s)	594
Lsp1109I	GCAGC	6 cut(s)	64, 311, 392, 692, 937, 1066
LweI	GCATC	1 cut(s)	311
MaeI	CTAG	1 cut(s)	723
MaeII	ACGT	2 cut(s)	105, 1048
MaeIII	GTNAC	3 cut(s)	199, 784, 852
MalI	GATC	4 cut(s)	62, 136, 164, 720
MboI	GATC	4 cut(s)	60, 134, 162, 718
MboII	GAAGA	6 cut(s)	106, 379, 525, 528, 838, 1006
MfeI	CAATTG	1 cut(s)	762
MflI	RGATCY	2 cut(s)	134, 718
MhlI	GDGCHC	1 cut(s)	546
MluCI	AATT	3 cut(s)	30, 751, 762
MmeI	TCCRAC	1 cut(s)	572
MnlI	CCTC	6 cut(s)	162, 198, 494, 901, 1057, 1063
MseI	TTAA	4 cut(s)	309, 750, 863, 1102
MslI	CAYNNNNRTG	1 cut(s)	782
MspA1I	CMGCKG	2 cut(s)	383, 1057
MspI	CCGG	1 cut(s)	789
MspR9I	CCNGG	1 cut(s)	407
MunI	CAATTG	1 cut(s)	762
MvaI	CCWGG	1 cut(s)	407
MwoI	GCNNNNNNNGC	3 cut(s)	254, 389, 398
NdeI	CATATG	1 cut(s)	814
NdeII	GATC	4 cut(s)	60, 134, 162, 718
NlaIII	CATG	7 cut(s)	61, 148, 163, 421, 530, 853, 1003
NlaIV	GGNNCC	3 cut(s)	453, 454, 834
NmuCI	GTSAC	3 cut(s)	199, 784, 852
NsbI	TGCGCA	1 cut(s)	1053
PceI	AGGCCT	1 cut(s)	405
PciSI	GCTCTTC	1 cut(s)	989
PfeI	GAWTC	2 cut(s)	733, 939
PkrI	GCNGC	6 cut(s)	79, 301, 382, 682, 952, 1056
Ppu21I	YACGTR	1 cut(s)	106
PpuMI	RGGWCCY	1 cut(s)	452
PshBI	ATTAAT	1 cut(s)	750
Psp5II	RGGWCCY	1 cut(s)	452
Psp6I	CCWGG	1 cut(s)	405
PspEI	GGTNACC	1 cut(s)	784
PspFI	CCCAGC	1 cut(s)	383
PspGI	CCWGG	1 cut(s)	405
PspN4I	GGNNCC	3 cut(s)	453, 454, 834
PspPI	GGNCC	2 cut(s)	452, 833
PspPPI	RGGWCCY	1 cut(s)	452
PstNI	CAGNNNCTG	1 cut(s)	383
PsuI	RGATCY	2 cut(s)	134, 718
PvuII	CAGCTG	2 cut(s)	383, 1057
RsaI	GTAC	3 cut(s)	609, 635, 1012
RsaNI	GTAC	3 cut(s)	608, 634, 1011
RseI	CAYNNNNRTG	1 cut(s)	782
SapI	GCTCTTC	1 cut(s)	989
SaqAI	TTAA	4 cut(s)	309, 750, 863, 1102
SatI	GCNGC	6 cut(s)	78, 300, 381, 681, 951, 1055
Sau3AI	GATC	4 cut(s)	60, 134, 162, 718
Sau96I	GGNCC	2 cut(s)	452, 833
ScrFI	CCNGG	1 cut(s)	407
SduI	GDGCHC	1 cut(s)	546
SfaNI	GCATC	1 cut(s)	311
SfcI	CTRYAG	1 cut(s)	118
SinI	GGWCC	1 cut(s)	452
SmiMI	CAYNNNNRTG	1 cut(s)	782
Sse9I	AATT	3 cut(s)	30, 751, 762
SseBI	AGGCCT	1 cut(s)	405
SspMI	CTAG	1 cut(s)	723
StuI	AGGCCT	1 cut(s)	405
StyD4I	CCNGG	1 cut(s)	405
TaaI	ACNGT	4 cut(s)	314, 687, 880, 965
TaiI	ACGT	2 cut(s)	108, 1051
TasI	AATT	3 cut(s)	30, 751, 762
TatI	WGTACW	1 cut(s)	607
TfiI	GAWTC	2 cut(s)	733, 939
Tru1I	TTAA	4 cut(s)	309, 750, 863, 1102
Tru9I	TTAA	4 cut(s)	309, 750, 863, 1102
TscAI	CASTG	3 cut(s)	734, 970, 1087
TseFI	GTSAC	3 cut(s)	199, 784, 852
TseI	GCWGC	6 cut(s)	77, 299, 380, 680, 950, 1054
Tsp45I	GTSAC	3 cut(s)	199, 784, 852
TspDTI	ATGAA	4 cut(s)	25, 110, 133, 786
TspRI	CASTG	3 cut(s)	734, 970, 1087
VpaK11BI	GGWCC	1 cut(s)	452
VspI	ATTAAT	1 cut(s)	750
XmiI	GTMKAC	2 cut(s)	316, 661
XspI	CTAG	1 cut(s)	723

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.