Auxin-induced protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G64700 AT5G64700 |
| fragaria_vesca | FvH4_1g23640 FvH4_1g23640 |
| prunus_persica | Prupe.6G160300_v2.0.a1 Prupe.6G160300_v2.0.a1 Prupe.6G160300_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0119241 |
| rosa_laevigata | RLG00000018458 RLG00000034036 |
| rosa_multiflora | Rmu_sc0001140.1_g000010 Rmu_sc0004760.1_g000012 Rmu_sc0007618.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00039430 Rroxscaffold_2G00124410 |
| rosa_rugosa | Rorug02G0221200 Rorug05G0190500.1 |
| rosa_samantha | Rh2AG279200 Rh2BG290000 Rh2DG285100 Rh2DG304100 Rh5AG276500 Rh5BG281500 Rh5CG313500 Rh5DG289500 |
| rosa_wichuraiana | Rw2G022200 Rw5G026010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AbsI | CCTCGAGG | 1 cut(s) | 188 |
| Acc36I | ACCTGC | 1 cut(s) | 378 |
| AccB1I | GGYRCC | 2 cut(s) | 92, 760 |
| AccI | GTMKAC | 3 cut(s) | 366, 1023, 1424 |
| AclWI | GGATC | 3 cut(s) | 445, 1397, 1410 |
| AcoI | YGGCCR | 2 cut(s) | 469, 1017 |
| AcuI | CTGAAG | 1 cut(s) | 38 |
| AcvI | CACGTG | 1 cut(s) | 136 |
| AcyI | GRCGYC | 1 cut(s) | 761 |
| AfaI | GTAC | 2 cut(s) | 195, 618 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 121, 290, 1299 |
| AflII | CTTAAG | 1 cut(s) | 1585 |
| AflIII | ACRYGT | 1 cut(s) | 133 |
| AgsI | TTSAA | 7 cut(s) | 65, 158, 664, 946, 1042, 1212, 1251 |
| AjnI | CCWGG | 2 cut(s) | 1014, 1047 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 584, 616 |
| AleI | CACNNNNGTG | 1 cut(s) | 683 |
| AluBI | AGCT | 8 cut(s) | 557, 828, 949, 976, 1203, 1306, 1337, 1592 |
| AluI | AGCT | 8 cut(s) | 557, 828, 949, 976, 1203, 1306, 1337, 1592 |
| Alw26I | GTCTC | 2 cut(s) | 69, 474 |
| AlwI | GGATC | 3 cut(s) | 445, 1397, 1410 |
| Ama87I | CYCGRG | 2 cut(s) | 188, 229 |
| ApeKI | GCWGC | 4 cut(s) | 656, 707, 710, 878 |
| AspLEI | GCGC | 1 cut(s) | 763 |
| AspS9I | GGNCC | 3 cut(s) | 281, 359, 1031 |
| AsuC2I | CCSGG | 1 cut(s) | 16 |
| AsuHPI | GGTGA | 5 cut(s) | 215, 389, 538, 1021, 1064 |
| AvaI | CYCGRG | 2 cut(s) | 188, 229 |
| AxyI | CCTNAGG | 1 cut(s) | 961 |
| BamHI | GGATCC | 1 cut(s) | 1402 |
| BanI | GGYRCC | 2 cut(s) | 92, 760 |
| BanII | GRGCYC | 2 cut(s) | 297, 1512 |
| BauI | CACGAG | 1 cut(s) | 1139 |
| BbrPI | CACGTG | 1 cut(s) | 136 |
| BbvI | GCAGC | 4 cut(s) | 643, 694, 697, 890 |
| BccI | CCATC | 7 cut(s) | 176, 194, 461, 928, 1114, 1280, 1305 |
| BceAI | ACGGC | 5 cut(s) | 94, 456, 774, 1004, 1014 |
| BciT130I | CCWGG | 2 cut(s) | 1016, 1049 |
| BcnI | CCSGG | 1 cut(s) | 16 |
| BcoDI | GTCTC | 2 cut(s) | 69, 474 |
| BfaI | CTAG | 4 cut(s) | 32, 197, 434, 554 |
| BfmI | CTRYAG | 1 cut(s) | 876 |
| BfoI | RGCGCY | 1 cut(s) | 764 |
| BfrI | CTTAAG | 1 cut(s) | 1585 |
| BfuAI | ACCTGC | 1 cut(s) | 378 |
| BisI | GCNGC | 8 cut(s) | 91, 105, 166, 226, 657, 708, 711, 879 |
| BlpI | GCTNAGC | 1 cut(s) | 972 |
| BlsI | GCNGC | 8 cut(s) | 92, 106, 167, 227, 658, 709, 712, 880 |
| Bme1390I | CCNGG | 3 cut(s) | 16, 1016, 1049 |
| BmeT110I | CYCGRG | 2 cut(s) | 188, 229 |
| BmgT120I | GGNCC | 3 cut(s) | 281, 359, 1031 |
| BmiI | GGNNCC | 4 cut(s) | 94, 762, 1033, 1404 |
| BmrFI | CCNGG | 3 cut(s) | 16, 1016, 1049 |
| BmsI | GCATC | 3 cut(s) | 196, 552, 1063 |
| BoxI | GACNNNNGTC | 2 cut(s) | 32, 1262 |
| BpmI | CTGGAG | 1 cut(s) | 462 |
| Bpu10I | CCTNAGC | 1 cut(s) | 950 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 972 |
| BpuMI | CCSGG | 1 cut(s) | 16 |
| BsaAI | YACGTR | 1 cut(s) | 136 |
| BsaHI | GRCGYC | 1 cut(s) | 761 |
| BsaI | GGTCTC | 1 cut(s) | 474 |
| BsaJI | CCNNGG | 5 cut(s) | 15, 651, 861, 1014, 1048 |
| BsaWI | WCCGGW | 1 cut(s) | 374 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 388, 418 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 121, 290, 1299 |
| Bse118I | RCCGGY | 1 cut(s) | 1358 |
| Bse1I | ACTGG | 3 cut(s) | 362, 534, 1406 |
| Bse21I | CCTNAGG | 1 cut(s) | 961 |
| Bse3DI | GCAATG | 1 cut(s) | 1266 |
| BseBI | CCWGG | 2 cut(s) | 1016, 1049 |
| BseDI | CCNNGG | 5 cut(s) | 15, 651, 861, 1014, 1048 |
| BseGI | GGATG | 5 cut(s) | 130, 187, 939, 1080, 1316 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 121, 290, 1299 |
| BseMI | GCAATG | 1 cut(s) | 1266 |
| BseMII | CTCAG | 3 cut(s) | 499, 920, 975 |
| BseNI | ACTGG | 3 cut(s) | 362, 534, 1406 |
| BseRI | GAGGAG | 3 cut(s) | 104, 341, 344 |
| BseXI | GCAGC | 4 cut(s) | 643, 694, 697, 890 |
| BsgI | GTGCAG | 1 cut(s) | 165 |
| BshNI | GGYRCC | 2 cut(s) | 92, 760 |
| BsiHKCI | CYCGRG | 2 cut(s) | 188, 229 |
| BsiSI | CCGG | 3 cut(s) | 15, 375, 1359 |
| BslFI | GGGAC | 1 cut(s) | 276 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 121, 290, 1299 |
| BsmAI | GTCTC | 2 cut(s) | 69, 474 |
| BsmBI | CGTCTC | 1 cut(s) | 69 |
| BsmFI | GGGAC | 1 cut(s) | 276 |
| Bso31I | GGTCTC | 1 cut(s) | 474 |
| BsoBI | CYCGRG | 2 cut(s) | 188, 229 |
| Bsp1286I | GDGCHC | 2 cut(s) | 297, 1512 |
| Bsp143I | GATC | 5 cut(s) | 109, 415, 437, 502, 1402 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 972 |
| BspCNI | CTCAG | 3 cut(s) | 498, 921, 974 |
| BspHI | TCATGA | 1 cut(s) | 777 |
| BspLI | GGNNCC | 4 cut(s) | 94, 762, 1033, 1404 |
| BspMAI | CTGCAG | 1 cut(s) | 880 |
| BspMI | ACCTGC | 1 cut(s) | 378 |
| BspPI | GGATC | 3 cut(s) | 445, 1397, 1410 |
| BspQI | GCTCTTC | 1 cut(s) | 1544 |
| BspT107I | GGYRCC | 2 cut(s) | 92, 760 |
| BspTI | CTTAAG | 1 cut(s) | 1585 |
| BspTNI | GGTCTC | 1 cut(s) | 474 |
| BsrDI | GCAATG | 1 cut(s) | 1266 |
| BsrFI | RCCGGY | 1 cut(s) | 1358 |
| BsrI | ACTGG | 3 cut(s) | 362, 534, 1406 |
| BssAI | RCCGGY | 1 cut(s) | 1358 |
| BssECI | CCNNGG | 5 cut(s) | 15, 651, 861, 1014, 1048 |
| BssMI | GATC | 5 cut(s) | 109, 415, 437, 502, 1402 |
| BssNAI | GTATAC | 2 cut(s) | 367, 1024 |
| BssNI | GRCGYC | 1 cut(s) | 761 |
| BssSI | CACGAG | 1 cut(s) | 1139 |
| BssT1I | CCWWGG | 1 cut(s) | 651 |
| Bst1107I | GTATAC | 2 cut(s) | 367, 1024 |
| Bst2BI | CACGAG | 1 cut(s) | 1139 |
| Bst2UI | CCWGG | 2 cut(s) | 1016, 1049 |
| Bst4CI | ACNGT | 3 cut(s) | 97, 143, 823 |
| Bst6I | CTCTTC | 3 cut(s) | 376, 1226, 1544 |
| BstACI | GRCGYC | 1 cut(s) | 761 |
| BstAFI | CTTAAG | 1 cut(s) | 1585 |
| BstBAI | YACGTR | 1 cut(s) | 136 |
| BstC8I | GCNNGC | 6 cut(s) | 22, 163, 634, 978, 982, 1185 |
| BstDEI | CTNAG | 7 cut(s) | 485, 929, 950, 961, 972, 1244, 1501 |
| BstEII | GGTNACC | 1 cut(s) | 1009 |
| BstF5I | GGATG | 5 cut(s) | 130, 187, 939, 1080, 1316 |
| BstH2I | RGCGCY | 1 cut(s) | 764 |
| BstHHI | GCGC | 1 cut(s) | 763 |
| BstKTI | GATC | 5 cut(s) | 112, 418, 440, 505, 1405 |
| BstMAI | GTCTC | 2 cut(s) | 69, 474 |
| BstMBI | GATC | 5 cut(s) | 109, 415, 437, 502, 1402 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 87, 231, 977, 1180 |
| BstNI | CCWGG | 2 cut(s) | 1016, 1049 |
| BstNSI | RCATGY | 1 cut(s) | 640 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 32, 1262 |
| BstPI | GGTNACC | 1 cut(s) | 1009 |
| BstSCI | CCNGG | 3 cut(s) | 14, 1014, 1047 |
| BstSFI | CTRYAG | 1 cut(s) | 876 |
| BstV1I | GCAGC | 4 cut(s) | 643, 694, 697, 890 |
| BstX2I | RGATCY | 2 cut(s) | 437, 1402 |
| BstYI | RGATCY | 2 cut(s) | 437, 1402 |
| BstZ17I | GTATAC | 2 cut(s) | 367, 1024 |
| Bsu36I | CCTNAGG | 1 cut(s) | 961 |
| BtgZI | GCGATG | 1 cut(s) | 1258 |
| BtsCI | GGATG | 5 cut(s) | 130, 187, 939, 1080, 1316 |
| BveI | ACCTGC | 1 cut(s) | 378 |
| Cac8I | GCNNGC | 6 cut(s) | 22, 163, 634, 978, 982, 1185 |
| CciI | TCATGA | 1 cut(s) | 777 |
| CfoI | GCGC | 1 cut(s) | 763 |
| Cfr10I | RCCGGY | 1 cut(s) | 1358 |
| Cfr13I | GGNCC | 3 cut(s) | 281, 359, 1031 |
| Csp6I | GTAC | 2 cut(s) | 194, 617 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1142, 1177 |
| CviAII | CATG | 6 cut(s) | 637, 673, 778, 1091, 1100, 1119 |
| CviQI | GTAC | 2 cut(s) | 194, 617 |
| DdeI | CTNAG | 7 cut(s) | 485, 929, 950, 961, 972, 1244, 1501 |
| DinI | GGCGCC | 1 cut(s) | 762 |
| DpnI | GATC | 5 cut(s) | 111, 417, 439, 504, 1404 |
| DpnII | GATC | 5 cut(s) | 109, 415, 437, 502, 1402 |
| EaeI | YGGCCR | 2 cut(s) | 469, 1017 |
| Eam1104I | CTCTTC | 3 cut(s) | 376, 1226, 1544 |
| EarI | CTCTTC | 3 cut(s) | 376, 1226, 1544 |
| EciI | GGCGGA | 1 cut(s) | 22 |
| Eco130I | CCWWGG | 1 cut(s) | 651 |
| Eco24I | GRGCYC | 2 cut(s) | 297, 1512 |
| Eco31I | GGTCTC | 1 cut(s) | 474 |
| Eco57I | CTGAAG | 1 cut(s) | 38 |
| Eco72I | CACGTG | 1 cut(s) | 136 |
| Eco81I | CCTNAGG | 1 cut(s) | 961 |
| Eco88I | CYCGRG | 2 cut(s) | 188, 229 |
| Eco91I | GGTNACC | 1 cut(s) | 1009 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1031 |
| EcoO65I | GGTNACC | 1 cut(s) | 1009 |
| EcoRII | CCWGG | 2 cut(s) | 1014, 1047 |
| EcoT14I | CCWWGG | 1 cut(s) | 651 |
| EcoT38I | GRGCYC | 2 cut(s) | 297, 1512 |
| EgeI | GGCGCC | 1 cut(s) | 762 |
| EheI | GGCGCC | 1 cut(s) | 762 |
| ErhI | CCWWGG | 1 cut(s) | 651 |
| Esp3I | CGTCTC | 1 cut(s) | 69 |
| FaeI | CATG | 6 cut(s) | 640, 676, 781, 1094, 1103, 1122 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 584, 616, 1118, 1150, 1192, 1224 |
| FaqI | GGGAC | 1 cut(s) | 276 |
| FatI | CATG | 6 cut(s) | 636, 672, 777, 1090, 1099, 1118 |
| FauI | CCCGC | 1 cut(s) | 267 |
| FblI | GTMKAC | 3 cut(s) | 366, 1023, 1424 |
| Fnu4HI | GCNGC | 8 cut(s) | 91, 105, 166, 226, 657, 708, 711, 879 |
| FokI | GGATG | 5 cut(s) | 137, 194, 946, 1067, 1323 |
| FriOI | GRGCYC | 2 cut(s) | 297, 1512 |
| Fsp4HI | GCNGC | 8 cut(s) | 91, 105, 166, 226, 657, 708, 711, 879 |
| FspBI | CTAG | 4 cut(s) | 32, 197, 434, 554 |
| GlaI | GCGC | 1 cut(s) | 762 |
| GluI | GCNGC | 8 cut(s) | 91, 105, 166, 226, 657, 708, 711, 879 |
| GsuI | CTGGAG | 1 cut(s) | 462 |
| HaeII | RGCGCY | 1 cut(s) | 764 |
| HapII | CCGG | 3 cut(s) | 15, 375, 1359 |
| HhaI | GCGC | 1 cut(s) | 763 |
| Hin1I | GRCGYC | 1 cut(s) | 761 |
| Hin1II | CATG | 6 cut(s) | 640, 676, 781, 1094, 1103, 1122 |
| Hin6I | GCGC | 1 cut(s) | 761 |
| HinP1I | GCGC | 1 cut(s) | 761 |
| HincII | GTYRAC | 1 cut(s) | 1425 |
| HindII | GTYRAC | 1 cut(s) | 1425 |
| HindIII | AAGCTT | 1 cut(s) | 974 |
| HinfI | GANTC | 4 cut(s) | 380, 397, 1042, 1315 |
| HpaII | CCGG | 3 cut(s) | 15, 375, 1359 |
| HphI | GGTGA | 5 cut(s) | 215, 389, 538, 1021, 1064 |
| Hpy166II | GTNNAC | 4 cut(s) | 139, 367, 1024, 1425 |
| Hpy188I | TCNGA | 6 cut(s) | 74, 353, 402, 466, 887, 1310 |
| Hpy188III | TCNNGA | 7 cut(s) | 441, 746, 778, 814, 1110, 1255, 1393 |
| Hpy8I | GTNNAC | 4 cut(s) | 139, 367, 1024, 1425 |
| Hpy99I | CGWCG | 2 cut(s) | 101, 122 |
| HpyCH4III | ACNGT | 3 cut(s) | 97, 143, 823 |
| HpyCH4IV | ACGT | 2 cut(s) | 135, 1259 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 87, 231, 977, 1180 |
| HpyF3I | CTNAG | 7 cut(s) | 485, 929, 950, 961, 972, 1244, 1501 |
| HpySE526I | ACGT | 2 cut(s) | 135, 1259 |
| Hsp92I | GRCGYC | 1 cut(s) | 761 |
| Hsp92II | CATG | 6 cut(s) | 640, 676, 781, 1094, 1103, 1122 |
| HspAI | GCGC | 1 cut(s) | 761 |
| KasI | GGCGCC | 1 cut(s) | 760 |
| Kzo9I | GATC | 5 cut(s) | 109, 415, 437, 502, 1402 |
| LguI | GCTCTTC | 1 cut(s) | 1544 |
| LmnI | GCTCC | 1 cut(s) | 353 |
| Lsp1109I | GCAGC | 4 cut(s) | 643, 694, 697, 890 |
| LweI | GCATC | 3 cut(s) | 196, 552, 1063 |
| MaeI | CTAG | 4 cut(s) | 32, 197, 434, 554 |
| MaeII | ACGT | 2 cut(s) | 135, 1259 |
| MaeIII | GTNAC | 3 cut(s) | 377, 1009, 1354 |
| MalI | GATC | 5 cut(s) | 111, 417, 439, 504, 1404 |
| MboI | GATC | 5 cut(s) | 109, 415, 437, 502, 1402 |
| MboII | GAAGA | 7 cut(s) | 248, 363, 512, 588, 1213, 1408, 1561 |
| MflI | RGATCY | 2 cut(s) | 437, 1402 |
| MhlI | GDGCHC | 2 cut(s) | 297, 1512 |
| MluCI | AATT | 2 cut(s) | 1347, 1464 |
| Mly113I | GGCGCC | 1 cut(s) | 761 |
| MlyI | GAGTC | 2 cut(s) | 374, 406 |
| MmeI | TCCRAC | 5 cut(s) | 331, 380, 435, 457, 1501 |
| MseI | TTAA | 1 cut(s) | 1586 |
| MslI | CAYNNNNRTG | 1 cut(s) | 683 |
| MspA1I | CMGCKG | 2 cut(s) | 769, 1344 |
| MspCI | CTTAAG | 1 cut(s) | 1585 |
| MspI | CCGG | 3 cut(s) | 15, 375, 1359 |
| MspR9I | CCNGG | 3 cut(s) | 16, 1016, 1049 |
| MvaI | CCWGG | 2 cut(s) | 1016, 1049 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 87, 231, 977, 1180 |
| NarI | GGCGCC | 1 cut(s) | 761 |
| NciI | CCSGG | 1 cut(s) | 16 |
| NdeII | GATC | 5 cut(s) | 109, 415, 437, 502, 1402 |
| NlaIII | CATG | 6 cut(s) | 640, 676, 781, 1094, 1103, 1122 |
| NlaIV | GGNNCC | 4 cut(s) | 94, 762, 1033, 1404 |
| NmeAIII | GCCGAG | 2 cut(s) | 276, 842 |
| NmuCI | GTSAC | 2 cut(s) | 377, 1009 |
| NspI | RCATGY | 1 cut(s) | 640 |
| OliI | CACNNNNGTG | 1 cut(s) | 683 |
| PaeR7I | CTCGAG | 1 cut(s) | 188 |
| PagI | TCATGA | 1 cut(s) | 777 |
| PciSI | GCTCTTC | 1 cut(s) | 1544 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 105, 303 |
| PfeI | GAWTC | 2 cut(s) | 1042, 1315 |
| PflFI | GACNNNGTC | 1 cut(s) | 308 |
| PkrI | GCNGC | 8 cut(s) | 92, 106, 167, 227, 658, 709, 712, 880 |
| PleI | GAGTC | 2 cut(s) | 374, 405 |
| PluTI | GGCGCC | 1 cut(s) | 764 |
| PmaCI | CACGTG | 1 cut(s) | 136 |
| PmlI | CACGTG | 1 cut(s) | 136 |
| PpsI | GAGTC | 2 cut(s) | 374, 405 |
| Ppu21I | YACGTR | 1 cut(s) | 136 |
| PshAI | GACNNNNGTC | 2 cut(s) | 32, 1262 |
| Psp6I | CCWGG | 2 cut(s) | 1014, 1047 |
| PspCI | CACGTG | 1 cut(s) | 136 |
| PspEI | GGTNACC | 1 cut(s) | 1009 |
| PspGI | CCWGG | 2 cut(s) | 1014, 1047 |
| PspN4I | GGNNCC | 4 cut(s) | 94, 762, 1033, 1404 |
| PspPI | GGNCC | 3 cut(s) | 281, 359, 1031 |
| PspXI | VCTCGAGB | 1 cut(s) | 188 |
| PstI | CTGCAG | 1 cut(s) | 880 |
| PsuI | RGATCY | 2 cut(s) | 437, 1402 |
| PsyI | GACNNNGTC | 1 cut(s) | 308 |
| RsaI | GTAC | 2 cut(s) | 195, 618 |
| RsaNI | GTAC | 2 cut(s) | 194, 617 |
| RseI | CAYNNNNRTG | 1 cut(s) | 683 |
| SalI | GTCGAC | 1 cut(s) | 1423 |
| SapI | GCTCTTC | 1 cut(s) | 1544 |
| SaqAI | TTAA | 1 cut(s) | 1586 |
| SatI | GCNGC | 8 cut(s) | 91, 105, 166, 226, 657, 708, 711, 879 |
| Sau3AI | GATC | 5 cut(s) | 109, 415, 437, 502, 1402 |
| Sau96I | GGNCC | 3 cut(s) | 281, 359, 1031 |
| SchI | GAGTC | 2 cut(s) | 374, 406 |
| ScrFI | CCNGG | 3 cut(s) | 16, 1016, 1049 |
| SduI | GDGCHC | 2 cut(s) | 297, 1512 |
| SfaNI | GCATC | 3 cut(s) | 196, 552, 1063 |
| SfcI | CTRYAG | 1 cut(s) | 876 |
| SfoI | GGCGCC | 1 cut(s) | 762 |
| Sfr274I | CTCGAG | 1 cut(s) | 188 |
| SlaI | CTCGAG | 1 cut(s) | 188 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 683 |
| SmlI | CTYRAG | 2 cut(s) | 188, 1585 |
| SmoI | CTYRAG | 2 cut(s) | 188, 1585 |
| Sse9I | AATT | 2 cut(s) | 1347, 1464 |
| SspDI | GGCGCC | 1 cut(s) | 760 |
| SspMI | CTAG | 4 cut(s) | 32, 197, 434, 554 |
| StyD4I | CCNGG | 3 cut(s) | 14, 1014, 1047 |
| StyI | CCWWGG | 1 cut(s) | 651 |
| TaaI | ACNGT | 3 cut(s) | 97, 143, 823 |
| TaiI | ACGT | 2 cut(s) | 138, 1262 |
| TaqI | TCGA | 5 cut(s) | 99, 189, 747, 1392, 1424 |
| TasI | AATT | 2 cut(s) | 1347, 1464 |
| TauI | GCSGC | 4 cut(s) | 93, 107, 168, 228 |
| TfiI | GAWTC | 2 cut(s) | 1042, 1315 |
| Tru1I | TTAA | 1 cut(s) | 1586 |
| Tru9I | TTAA | 1 cut(s) | 1586 |
| TseFI | GTSAC | 2 cut(s) | 377, 1009 |
| TseI | GCWGC | 4 cut(s) | 656, 707, 710, 878 |
| Tsp45I | GTSAC | 2 cut(s) | 377, 1009 |
| TspDTI | ATGAA | 6 cut(s) | 689, 766, 795, 1058, 1107, 1211 |
| Tth111I | GACNNNGTC | 1 cut(s) | 308 |
| Vha464I | CTTAAG | 1 cut(s) | 1585 |
| XceI | RCATGY | 1 cut(s) | 640 |
| XhoI | CTCGAG | 1 cut(s) | 188 |
| XmiI | GTMKAC | 3 cut(s) | 366, 1023, 1424 |
| XspI | CTAG | 4 cut(s) | 32, 197, 434, 554 |