Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0007147

Physical Location & Seq

Genomic Coordinates Forward (+)

22915057 .. 22921693

Gene Structure 6637 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G224400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 942 bp

ATGCTCCGGGCAGATGTATATTGCTCTCCGCTTTACAGTCCTCCACAGGTCAAGTTAGTGAAGGTTGGTAGCAGCTCCAGCTCATGGCTGATCCAATACCGCAGTGCTCGAAGGCTACCCAAGGGGGTTTCTGTCAAAGCCTTGAAAGATGAGGCAGGCGGGGAAACAAGCGGTTTCCGTGGCCAGAGTTGGGATCCTGGGTCAGAAATCGAGGTTCCTTATGAACAAAGGCCGGTGAATGAGTACTCATCTCTGAAGGACGGAGTTTTATACTCGTGGGGTGAACTGGGACCTGGGCCTTTCCTCCTTCGTCTTGGAGGTTTGTGGTTGGTTACTTTCACAACTCTAGGAGTGCCTATTGCAGCTGCAAGCTTTAATCCATCAAGGGATCCTCTAAAATTTGCGCTAGCTGCTGGAACTGGAACTCTTTTTGTTGTATCGTTGATCGTCTTAAGAATTTATCTGGGATGGAGTTATGTTGGTGATCGACTACTATCAGCAGTCATACCTTACGAAGAGAGTGGCTGGTATGATGGACAAATGTGGGTAAAGCCACCTGAGGTCTTGGCTCGTGATAGACTATTGGGCTCTTACAAGGTTAAACCCGTCATCAAATTGCTGAAACAGACTCTAGTTGGAACAGGGGCATTACTTGTCACAGGAGCGTTGCTGTTTATCTTTGCTACACCGGTGGAGGATTTCATTCACACCACATTTGGCATAAAAGATAACTCATCAAATGTTTCCGCCTCAAAGATCAGCACAAAGTTCAGCATAAGAAAAGAGGAGTTGCTAAAATTGCCTACGGACGTGAGGTCTGATGATGATCTAGCAGCAGCCGCTGCTGAGGCTGCTGATGGAAGACCAGTCTACTGCAGAGATAGGTTTTATCGTGCATTAGCTGGTGGGCAGTACTGCAAATGGGAGGATCTACTTAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006950 GO:0008150 GO:0009605 GO:0009991 GO:0031667 GO:0042594 GO:0050896 GO:1990641

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1230

Protein Analysis

314

Amino Acids

34.38

Weight (kDa)

8.93

Isoelectric Point (pI)

34.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007147)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67370
fragaria_vesca	FvH4_1g17200 FvH4_1g17200 FvH4_1g17200 FvH4_1g17200 FvH4_1g17200
malus_domestica	MD02G1181900.v1.1 MD15G1293200.v1.1
prunus_persica	Prupe.6G224400_v2.0.a1 Prupe.6G224400_v2.0.a1
pyrus_communis	pycom02g14750 pycom15g25620
rosa_chinensis	RchiOBHm_Chr2g0107351
rosa_laevigata	RLG00000017572
rosa_multiflora	Rmu_co8510805.1_g000001 Rmu_sc0010952.1_g000013
rosa_roxburghii	Rroxscaffold_2G00136410
rosa_rugosa	Rorug02G0142300 Rorug02G0142400 Rorug02G0142500
rosa_samantha	Rh2AG193000 Rh2BG205200 Rh2CG198300 Rh2DG200300
rosa_wichuraiana	Rw2G015290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	84
AccI	GTMKAC	1 cut(s)	870
AciI	CCGC	6 cut(s)	29, 100, 159, 171, 747, 840
AclWI	GGATC	6 cut(s)	85, 188, 201, 383, 396, 936
AcoI	YGGCCR	1 cut(s)	181
AcsI	RAATTY	2 cut(s)	398, 456
AcuI	CTGAAG	1 cut(s)	275
AfaI	GTAC	2 cut(s)	245, 914
AfiI	CCNNNNNNNGG	2 cut(s)	84, 190
AflII	CTTAAG	2 cut(s)	451, 935
AgeI	ACCGGT	1 cut(s)	688
AgsI	TTSAA	1 cut(s)	145
AhdI	GACNNNNNGTC	1 cut(s)	814
AjiI	CACGTC	1 cut(s)	811
AjnI	CCWGG	2 cut(s)	196, 292
AluBI	AGCT	6 cut(s)	75, 81, 365, 372, 410, 902
AluI	AGCT	6 cut(s)	75, 81, 365, 372, 410, 902
Alw21I	GWGCWC	1 cut(s)	109
AlwI	GGATC	6 cut(s)	85, 188, 201, 383, 396, 936
AlwNI	CAGNNNCTG	1 cut(s)	842
AoxI	GGCC	3 cut(s)	181, 230, 296
ApeKI	GCWGC	8 cut(s)	72, 362, 365, 410, 833, 836, 842, 851
ApoI	RAATTY	2 cut(s)	398, 456
AsiGI	ACCGGT	1 cut(s)	688
AspLEI	GCGC	1 cut(s)	406
AspS9I	GGNCC	2 cut(s)	290, 296
AsuC2I	CCSGG	1 cut(s)	8
AsuHPI	GGTGA	3 cut(s)	247, 293, 494
AsuNHI	GCTAGC	1 cut(s)	406
AvaII	GGWCC	1 cut(s)	290
AxyI	CCTNAGG	1 cut(s)	558
BalI	TGGCCA	1 cut(s)	183
BamHI	GGATCC	2 cut(s)	193, 388
BanII	GRGCYC	1 cut(s)	590
BauI	CACGAG	2 cut(s)	274, 570
BbsI	GAAGAC	1 cut(s)	868
Bbv12I	GWGCWC	1 cut(s)	109
BbvCI	CCTCAGC	1 cut(s)	846
BbvI	GCAGC	8 cut(s)	84, 352, 374, 397, 829, 838, 845, 848
BccI	CCATC	4 cut(s)	388, 462, 527, 851
BciT130I	CCWGG	2 cut(s)	198, 294
BcnI	CCSGG	1 cut(s)	8
BfaI	CTAG	4 cut(s)	347, 407, 632, 830
BfmI	CTRYAG	1 cut(s)	874
BfrI	CTTAAG	2 cut(s)	451, 935
BisI	GCNGC	9 cut(s)	73, 363, 366, 411, 834, 837, 840, 843, 852
BlsI	GCNGC	9 cut(s)	74, 364, 367, 412, 835, 838, 841, 844, 853
BmcAI	AGTACT	2 cut(s)	245, 914
Bme1390I	CCNGG	3 cut(s)	8, 198, 294
Bme18I	GGWCC	1 cut(s)	290
BmeRI	GACNNNNNGTC	1 cut(s)	814
BmgBI	CACGTC	1 cut(s)	811
BmgT120I	GGNCC	2 cut(s)	290, 296
BmiI	GGNNCC	4 cut(s)	195, 216, 291, 390
BmrFI	CCNGG	3 cut(s)	8, 198, 294
BmrI	ACTGGG	1 cut(s)	296
BmtI	GCTAGC	1 cut(s)	410
BmuI	ACTGGG	1 cut(s)	296
BpiI	GAAGAC	1 cut(s)	868
BpmI	CTGGAG	1 cut(s)	61
Bpu10I	CCTNAGC	1 cut(s)	846
BpuMI	CCSGG	1 cut(s)	8
BsaBI	GATNNNNATC	1 cut(s)	825
BsaJI	CCNNGG	4 cut(s)	120, 178, 197, 293
BsaWI	WCCGGW	1 cut(s)	688
Bsc4I	CCNNNNNNNGG	2 cut(s)	84, 190
Bse118I	RCCGGY	2 cut(s)	232, 688
Bse1I	ACTGG	3 cut(s)	291, 424, 866
Bse21I	CCTNAGG	1 cut(s)	558
Bse8I	GATNNNNATC	1 cut(s)	825
BseBI	CCWGG	2 cut(s)	198, 294
BseDI	CCNNGG	4 cut(s)	120, 178, 197, 293
BseGI	GGATG	1 cut(s)	473
BseJI	GATNNNNATC	1 cut(s)	825
BseLI	CCNNNNNNNGG	2 cut(s)	84, 190
BseMII	CTCAG	2 cut(s)	549, 837
BseNI	ACTGG	3 cut(s)	291, 424, 866
BseRI	GAGGAG	1 cut(s)	800
BseXI	GCAGC	8 cut(s)	84, 352, 374, 397, 829, 838, 845, 848
BshFI	GGCC	3 cut(s)	183, 232, 298
BshTI	ACCGGT	1 cut(s)	688
BsiHKAI	GWGCWC	1 cut(s)	109
BsiSI	CCGG	3 cut(s)	7, 233, 689
BslFI	GGGAC	1 cut(s)	303
BslI	CCNNNNNNNGG	2 cut(s)	84, 190
BsmFI	GGGAC	1 cut(s)	303
BsnI	GGCC	3 cut(s)	183, 232, 298
Bsp1286I	GDGCHC	2 cut(s)	109, 590
Bsp143I	GATC	8 cut(s)	90, 193, 388, 444, 484, 756, 826, 928
BspACI	CCGC	6 cut(s)	29, 100, 159, 171, 747, 840
BspANI	GGCC	3 cut(s)	183, 232, 298
BspCNI	CTCAG	2 cut(s)	550, 838
BspLI	GGNNCC	4 cut(s)	195, 216, 291, 390
BspMAI	CTGCAG	1 cut(s)	878
BspOI	GCTAGC	1 cut(s)	410
BspPI	GGATC	6 cut(s)	85, 188, 201, 383, 396, 936
BspTI	CTTAAG	2 cut(s)	451, 935
BsrFI	RCCGGY	2 cut(s)	232, 688
BsrI	ACTGG	3 cut(s)	291, 424, 866
BssAI	RCCGGY	2 cut(s)	232, 688
BssECI	CCNNGG	4 cut(s)	120, 178, 197, 293
BssMI	GATC	8 cut(s)	90, 193, 388, 444, 484, 756, 826, 928
BssSI	CACGAG	2 cut(s)	274, 570
BssT1I	CCWWGG	1 cut(s)	120
Bst2BI	CACGAG	2 cut(s)	274, 570
Bst2UI	CCWGG	2 cut(s)	198, 294
Bst4CI	ACNGT	1 cut(s)	38
Bst6I	CTCTTC	1 cut(s)	510
BstAFI	CTTAAG	2 cut(s)	451, 935
BstAPI	GCANNNNNTGC	1 cut(s)	842
BstC8I	GCNNGC	3 cut(s)	157, 370, 408
BstDEI	CTNAG	2 cut(s)	558, 846
BstDSI	CCRYGG	1 cut(s)	178
BstF5I	GGATG	1 cut(s)	473
BstHHI	GCGC	1 cut(s)	406
BstKTI	GATC	8 cut(s)	93, 196, 391, 447, 487, 759, 829, 931
BstMBI	GATC	8 cut(s)	90, 193, 388, 444, 484, 756, 826, 928
BstMWI	GCNNNNNNNGC	7 cut(s)	78, 410, 799, 839, 842, 848, 851
BstNI	CCWGG	2 cut(s)	198, 294
BstSCI	CCNGG	3 cut(s)	6, 196, 292
BstSFI	CTRYAG	1 cut(s)	874
BstV1I	GCAGC	8 cut(s)	84, 352, 374, 397, 829, 838, 845, 848
BstV2I	GAAGAC	1 cut(s)	868
BstX2I	RGATCY	3 cut(s)	193, 388, 928
BstYI	RGATCY	3 cut(s)	193, 388, 928
Bsu36I	CCTNAGG	1 cut(s)	558
BsuRI	GGCC	3 cut(s)	183, 232, 298
BtgI	CCRYGG	1 cut(s)	178
BtrI	CACGTC	1 cut(s)	811
BtsCI	GGATG	1 cut(s)	473
BtsI	GCAGTG	1 cut(s)	109
BtsIMutI	CAGTG	1 cut(s)	109
Cac8I	GCNNGC	3 cut(s)	157, 370, 408
CaiI	CAGNNNCTG	1 cut(s)	842
CfoI	GCGC	1 cut(s)	406
Cfr10I	RCCGGY	2 cut(s)	232, 688
Cfr13I	GGNCC	2 cut(s)	290, 296
Csp6I	GTAC	2 cut(s)	244, 913
CspAI	ACCGGT	1 cut(s)	688
CviAII	CATG	1 cut(s)	84
CviQI	GTAC	2 cut(s)	244, 913
DdeI	CTNAG	2 cut(s)	558, 846
DpnI	GATC	8 cut(s)	92, 195, 390, 446, 486, 758, 828, 930
DpnII	GATC	8 cut(s)	90, 193, 388, 444, 484, 756, 826, 928
DriI	GACNNNNNGTC	1 cut(s)	814
EaeI	YGGCCR	1 cut(s)	181
Eam1104I	CTCTTC	1 cut(s)	510
Eam1105I	GACNNNNNGTC	1 cut(s)	814
EarI	CTCTTC	1 cut(s)	510
EciI	GGCGGA	1 cut(s)	736
Eco130I	CCWWGG	1 cut(s)	120
Eco24I	GRGCYC	1 cut(s)	590
Eco47I	GGWCC	1 cut(s)	290
Eco57I	CTGAAG	1 cut(s)	275
Eco81I	CCTNAGG	1 cut(s)	558
EcoO109I	RGGNCCY	1 cut(s)	290
EcoRII	CCWGG	2 cut(s)	196, 292
EcoT14I	CCWWGG	1 cut(s)	120
EcoT38I	GRGCYC	1 cut(s)	590
ErhI	CCWWGG	1 cut(s)	120
FaeI	CATG	1 cut(s)	87
FaiI	YATR	9 cut(s)	19, 85, 222, 271, 477, 506, 531, 722, 776
FaqI	GGGAC	1 cut(s)	303
FatI	CATG	1 cut(s)	83
FauI	CCCGC	1 cut(s)	152
FblI	GTMKAC	1 cut(s)	870
Fnu4HI	GCNGC	9 cut(s)	73, 363, 366, 411, 834, 837, 840, 843, 852
FokI	GGATG	1 cut(s)	480
FriOI	GRGCYC	1 cut(s)	590
Fsp4HI	GCNGC	9 cut(s)	73, 363, 366, 411, 834, 837, 840, 843, 852
FspBI	CTAG	4 cut(s)	347, 407, 632, 830
GlaI	GCGC	1 cut(s)	405
GluI	GCNGC	9 cut(s)	73, 363, 366, 411, 834, 837, 840, 843, 852
GsuI	CTGGAG	1 cut(s)	61
HaeIII	GGCC	3 cut(s)	183, 232, 298
HapII	CCGG	3 cut(s)	7, 233, 689
HhaI	GCGC	1 cut(s)	406
Hin1II	CATG	1 cut(s)	87
Hin6I	GCGC	1 cut(s)	404
HinP1I	GCGC	1 cut(s)	404
HindIII	AAGCTT	1 cut(s)	370
HinfI	GANTC	1 cut(s)	628
HpaII	CCGG	3 cut(s)	7, 233, 689
HphI	GGTGA	3 cut(s)	247, 293, 494
Hpy166II	GTNNAC	2 cut(s)	284, 871
Hpy188I	TCNGA	3 cut(s)	205, 255, 820
Hpy188III	TCNNGA	1 cut(s)	572
Hpy8I	GTNNAC	2 cut(s)	284, 871
HpyAV	CCTTC	4 cut(s)	55, 105, 250, 317
HpyCH4III	ACNGT	1 cut(s)	38
HpyCH4IV	ACGT	1 cut(s)	810
HpyCH4V	TGCA	5 cut(s)	362, 368, 876, 896, 918
HpyF10VI	GCNNNNNNNGC	7 cut(s)	78, 410, 799, 839, 842, 848, 851
HpyF3I	CTNAG	2 cut(s)	558, 846
HpySE526I	ACGT	1 cut(s)	810
Hsp92II	CATG	1 cut(s)	87
HspAI	GCGC	1 cut(s)	404
Kzo9I	GATC	8 cut(s)	90, 193, 388, 444, 484, 756, 826, 928
LmnI	GCTCC	3 cut(s)	9, 80, 662
Lsp1109I	GCAGC	8 cut(s)	84, 352, 374, 397, 829, 838, 845, 848
MaeI	CTAG	4 cut(s)	347, 407, 632, 830
MaeII	ACGT	1 cut(s)	810
MaeIII	GTNAC	2 cut(s)	331, 655
MalI	GATC	8 cut(s)	92, 195, 390, 446, 486, 758, 828, 930
MboI	GATC	8 cut(s)	90, 193, 388, 444, 484, 756, 826, 928
MboII	GAAGA	2 cut(s)	527, 873
MflI	RGATCY	3 cut(s)	193, 388, 928
MhlI	GDGCHC	2 cut(s)	109, 590
MlsI	TGGCCA	1 cut(s)	183
MluCI	AATT	4 cut(s)	398, 456, 614, 797
MluNI	TGGCCA	1 cut(s)	183
MlyI	GAGTC	1 cut(s)	622
MmeI	TCCRAC	1 cut(s)	616
Mox20I	TGGCCA	1 cut(s)	183
MscI	TGGCCA	1 cut(s)	183
MseI	TTAA	4 cut(s)	375, 452, 600, 936
Msp20I	TGGCCA	1 cut(s)	183
MspA1I	CMGCKG	2 cut(s)	365, 842
MspCI	CTTAAG	2 cut(s)	451, 935
MspI	CCGG	3 cut(s)	7, 233, 689
MspR9I	CCNGG	3 cut(s)	8, 198, 294
MvaI	CCWGG	2 cut(s)	198, 294
MwoI	GCNNNNNNNGC	7 cut(s)	78, 410, 799, 839, 842, 848, 851
NciI	CCSGG	1 cut(s)	8
NdeII	GATC	8 cut(s)	90, 193, 388, 444, 484, 756, 826, 928
NheI	GCTAGC	1 cut(s)	406
NlaIII	CATG	1 cut(s)	87
NlaIV	GGNNCC	4 cut(s)	195, 216, 291, 390
NmuCI	GTSAC	1 cut(s)	655
PflMI	CCANNNNNTGG	1 cut(s)	84
PinAI	ACCGGT	1 cut(s)	688
PkrI	GCNGC	9 cut(s)	74, 364, 367, 412, 835, 838, 841, 844, 853
PleI	GAGTC	1 cut(s)	622
PpsI	GAGTC	1 cut(s)	622
PpuMI	RGGWCCY	1 cut(s)	290
Psp5II	RGGWCCY	1 cut(s)	290
Psp6I	CCWGG	2 cut(s)	196, 292
PspGI	CCWGG	2 cut(s)	196, 292
PspN4I	GGNNCC	4 cut(s)	195, 216, 291, 390
PspPI	GGNCC	2 cut(s)	290, 296
PspPPI	RGGWCCY	1 cut(s)	290
PstI	CTGCAG	1 cut(s)	878
PstNI	CAGNNNCTG	1 cut(s)	842
PsuI	RGATCY	3 cut(s)	193, 388, 928
PvuII	CAGCTG	1 cut(s)	365
RsaI	GTAC	2 cut(s)	245, 914
RsaNI	GTAC	2 cut(s)	244, 913
SaqAI	TTAA	4 cut(s)	375, 452, 600, 936
SatI	GCNGC	9 cut(s)	73, 363, 366, 411, 834, 837, 840, 843, 852
Sau3AI	GATC	8 cut(s)	90, 193, 388, 444, 484, 756, 826, 928
Sau96I	GGNCC	2 cut(s)	290, 296
ScaI	AGTACT	2 cut(s)	245, 914
SchI	GAGTC	1 cut(s)	622
ScrFI	CCNGG	3 cut(s)	8, 198, 294
SduI	GDGCHC	2 cut(s)	109, 590
SfcI	CTRYAG	1 cut(s)	874
SgrAI	CRCCGGYG	1 cut(s)	688
SinI	GGWCC	1 cut(s)	290
SmlI	CTYRAG	2 cut(s)	451, 935
SmoI	CTYRAG	2 cut(s)	451, 935
Sse9I	AATT	4 cut(s)	398, 456, 614, 797
SsiI	CCGC	6 cut(s)	29, 100, 159, 171, 747, 840
SspMI	CTAG	4 cut(s)	347, 407, 632, 830
StyD4I	CCNGG	3 cut(s)	6, 196, 292
StyI	CCWWGG	1 cut(s)	120
TaaI	ACNGT	1 cut(s)	38
TaiI	ACGT	1 cut(s)	813
TaqI	TCGA	3 cut(s)	109, 210, 487
TasI	AATT	4 cut(s)	398, 456, 614, 797
TatI	WGTACW	2 cut(s)	243, 912
TauI	GCSGC	1 cut(s)	842
Tru1I	TTAA	4 cut(s)	375, 452, 600, 936
Tru9I	TTAA	4 cut(s)	375, 452, 600, 936
TscAI	CASTG	1 cut(s)	109
TseFI	GTSAC	1 cut(s)	655
TseI	GCWGC	8 cut(s)	72, 362, 365, 410, 833, 836, 842, 851
Tsp45I	GTSAC	1 cut(s)	655
TspDTI	ATGAA	2 cut(s)	237, 691
TspGWI	ACGGA	3 cut(s)	167, 276, 821
TspRI	CASTG	1 cut(s)	109
Van91I	CCANNNNNTGG	1 cut(s)	84
Vha464I	CTTAAG	2 cut(s)	451, 935
VpaK11BI	GGWCC	1 cut(s)	290
XapI	RAATTY	2 cut(s)	398, 456
XmiI	GTMKAC	1 cut(s)	870
XspI	CTAG	4 cut(s)	347, 407, 632, 830
ZrmI	AGTACT	2 cut(s)	245, 914

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.