UPF0481 protein At3g47200-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g11220 |
| prunus_persica | Prupe.6G273900_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr3g0462701 RchiOBHm_Chr3g0462721 |
| rosa_laevigata | RLG00000024837 |
| rosa_multiflora | Rmu_co8146084.1_g000001 Rmu_co8365749.1_g000001 Rmu_sc0000766.1_g000001 Rmu_sc0000766.1_g000002 Rmu_sc0004225.1_g000001 Rmu_sc0011057.1_g000006 |
| rosa_roxburghii | Rroxscaffold_6G00417250 |
| rosa_rugosa | Rorug03G0058800 |
| rosa_samantha | Rh3AG116700 Rh3AG116800 Rh3BG120300 Rh3BG120400 Rh3CG123400 Rh3CG123500 Rh3DG122200 Rh5DG446700 |
| rosa_wichuraiana | Rw3G009880 Rw3G009890 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 100 |
| AciI | CCGC | 1 cut(s) | 51 |
| AfaI | GTAC | 2 cut(s) | 22, 266 |
| AgsI | TTSAA | 2 cut(s) | 301, 344 |
| AluBI | AGCT | 4 cut(s) | 45, 58, 82, 221 |
| AluI | AGCT | 4 cut(s) | 45, 58, 82, 221 |
| AoxI | GGCC | 1 cut(s) | 202 |
| ApeKI | GCWGC | 1 cut(s) | 218 |
| AspS9I | GGNCC | 1 cut(s) | 188 |
| AsuHPI | GGTGA | 2 cut(s) | 103, 160 |
| AvaII | GGWCC | 1 cut(s) | 188 |
| BbsI | GAAGAC | 1 cut(s) | 74 |
| BbvI | GCAGC | 1 cut(s) | 230 |
| BfmI | CTRYAG | 2 cut(s) | 121, 260 |
| BisI | GCNGC | 1 cut(s) | 219 |
| BlpI | GCTNAGC | 1 cut(s) | 54 |
| BlsI | GCNGC | 1 cut(s) | 220 |
| Bme18I | GGWCC | 1 cut(s) | 188 |
| BmgT120I | GGNCC | 1 cut(s) | 188 |
| BmsI | GCATC | 2 cut(s) | 126, 148 |
| BpiI | GAAGAC | 1 cut(s) | 74 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 54 |
| BpuEI | CTTGAG | 2 cut(s) | 133, 264 |
| Bse1I | ACTGG | 1 cut(s) | 334 |
| BseMII | CTCAG | 2 cut(s) | 45, 279 |
| BseNI | ACTGG | 1 cut(s) | 334 |
| BseXI | GCAGC | 1 cut(s) | 230 |
| BsgI | GTGCAG | 1 cut(s) | 292 |
| BshFI | GGCC | 1 cut(s) | 204 |
| BsnI | GGCC | 1 cut(s) | 204 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 54 |
| BspACI | CCGC | 1 cut(s) | 51 |
| BspANI | GGCC | 1 cut(s) | 204 |
| BspCNI | CTCAG | 2 cut(s) | 46, 280 |
| BspMAI | CTGCAG | 1 cut(s) | 264 |
| BsrI | ACTGG | 1 cut(s) | 334 |
| BstC8I | GCNNGC | 2 cut(s) | 84, 351 |
| BstDEI | CTNAG | 2 cut(s) | 54, 288 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 238, 247, 284 |
| BstNSI | RCATGY | 2 cut(s) | 250, 353 |
| BstSFI | CTRYAG | 2 cut(s) | 121, 260 |
| BstV1I | GCAGC | 1 cut(s) | 230 |
| BstV2I | GAAGAC | 1 cut(s) | 74 |
| BsuRI | GGCC | 1 cut(s) | 204 |
| BtsIMutI | CAGTG | 1 cut(s) | 341 |
| Cac8I | GCNNGC | 2 cut(s) | 84, 351 |
| Cfr13I | GGNCC | 1 cut(s) | 188 |
| Csp6I | GTAC | 2 cut(s) | 21, 265 |
| CviAII | CATG | 3 cut(s) | 209, 247, 350 |
| CviJI | RGCY | 8 cut(s) | 45, 58, 82, 155, 204, 221, 241, 287 |
| CviKI_1 | RGCY | 8 cut(s) | 45, 58, 82, 155, 204, 221, 241, 287 |
| CviQI | GTAC | 2 cut(s) | 21, 265 |
| DdeI | CTNAG | 2 cut(s) | 54, 288 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 100 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 100 |
| Eco47I | GGWCC | 1 cut(s) | 188 |
| FaeI | CATG | 3 cut(s) | 212, 250, 353 |
| FaiI | YATR | 9 cut(s) | 36, 38, 74, 123, 210, 234, 248, 324, 351 |
| FatI | CATG | 3 cut(s) | 208, 246, 349 |
| Fnu4HI | GCNGC | 1 cut(s) | 219 |
| Fsp4HI | GCNGC | 1 cut(s) | 219 |
| GluI | GCNGC | 1 cut(s) | 219 |
| HaeIII | GGCC | 1 cut(s) | 204 |
| Hin1II | CATG | 3 cut(s) | 212, 250, 353 |
| HindIII | AAGCTT | 2 cut(s) | 43, 80 |
| HinfI | GANTC | 1 cut(s) | 101 |
| HphI | GGTGA | 2 cut(s) | 103, 160 |
| Hpy166II | GTNNAC | 1 cut(s) | 267 |
| Hpy188I | TCNGA | 2 cut(s) | 100, 106 |
| Hpy188III | TCNNGA | 2 cut(s) | 143, 281 |
| Hpy8I | GTNNAC | 1 cut(s) | 267 |
| HpyAV | CCTTC | 1 cut(s) | 145 |
| HpyCH4IV | ACGT | 1 cut(s) | 19 |
| HpyCH4V | TGCA | 3 cut(s) | 218, 262, 309 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 238, 247, 284 |
| HpyF3I | CTNAG | 2 cut(s) | 54, 288 |
| HpySE526I | ACGT | 1 cut(s) | 19 |
| Hsp92II | CATG | 3 cut(s) | 212, 250, 353 |
| LpnPI | CCDG | 2 cut(s) | 184, 347 |
| Lsp1109I | GCAGC | 1 cut(s) | 230 |
| LweI | GCATC | 2 cut(s) | 126, 148 |
| MaeII | ACGT | 1 cut(s) | 19 |
| MaeIII | GTNAC | 1 cut(s) | 91 |
| MboII | GAAGA | 1 cut(s) | 79 |
| MfeI | CAATTG | 1 cut(s) | 183 |
| MluCI | AATT | 1 cut(s) | 183 |
| MlyI | GAGTC | 1 cut(s) | 110 |
| MnlI | CCTC | 3 cut(s) | 100, 139, 277 |
| MseI | TTAA | 1 cut(s) | 6 |
| MspA1I | CMGCKG | 1 cut(s) | 53 |
| MunI | CAATTG | 1 cut(s) | 183 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 238, 247, 284 |
| NlaIII | CATG | 3 cut(s) | 212, 250, 353 |
| NmuCI | GTSAC | 1 cut(s) | 91 |
| NspI | RCATGY | 2 cut(s) | 250, 353 |
| PaeI | GCATGC | 1 cut(s) | 353 |
| PkrI | GCNGC | 1 cut(s) | 220 |
| PleI | GAGTC | 1 cut(s) | 109 |
| PpsI | GAGTC | 1 cut(s) | 109 |
| PspPI | GGNCC | 1 cut(s) | 188 |
| PstI | CTGCAG | 1 cut(s) | 264 |
| RsaI | GTAC | 2 cut(s) | 22, 266 |
| RsaNI | GTAC | 2 cut(s) | 21, 265 |
| SaqAI | TTAA | 1 cut(s) | 6 |
| SatI | GCNGC | 1 cut(s) | 219 |
| Sau96I | GGNCC | 1 cut(s) | 188 |
| SchI | GAGTC | 1 cut(s) | 110 |
| SetI | ASST | 8 cut(s) | 22, 47, 60, 84, 150, 193, 216, 223 |
| SfaNI | GCATC | 2 cut(s) | 126, 148 |
| SfcI | CTRYAG | 2 cut(s) | 121, 260 |
| SinI | GGWCC | 1 cut(s) | 188 |
| SmlI | CTYRAG | 2 cut(s) | 112, 279 |
| SmoI | CTYRAG | 2 cut(s) | 112, 279 |
| SphI | GCATGC | 1 cut(s) | 353 |
| Sse9I | AATT | 1 cut(s) | 183 |
| SsiI | CCGC | 1 cut(s) | 51 |
| TaiI | ACGT | 1 cut(s) | 22 |
| TaqI | TCGA | 1 cut(s) | 142 |
| TasI | AATT | 1 cut(s) | 183 |
| TatI | WGTACW | 1 cut(s) | 264 |
| Tru1I | TTAA | 1 cut(s) | 6 |
| Tru9I | TTAA | 1 cut(s) | 6 |
| TscAI | CASTG | 1 cut(s) | 341 |
| TseFI | GTSAC | 1 cut(s) | 91 |
| TseI | GCWGC | 1 cut(s) | 218 |
| Tsp45I | GTSAC | 1 cut(s) | 91 |
| TspDTI | ATGAA | 1 cut(s) | 185 |
| TspGWI | ACGGA | 2 cut(s) | 44, 239 |
| TspRI | CASTG | 1 cut(s) | 341 |
| VpaK11BI | GGWCC | 1 cut(s) | 188 |
| XceI | RCATGY | 2 cut(s) | 250, 353 |