Prupe.6G329200_v2.0.a1

UDP-N-acetylglucosamine transferase subunit ALG13 homolog

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
28793080 .. 28794978
1899 bp
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UTR
Exon/CDS
Intron
Prupe.6G329200.1

Sequence Viewer

Length: 537 bp
ATGGGAGATACTGAGGCTACCGTGAAGTCGAAGAAGACAGTTTTTGTGACTGTTGGAACTACTTCTTTTGATGCTCTTATTAGAGCAGTGGATACTCAGGAGGTTAAAGCAGAGTTGTTAAGGAGAGGGTATACCCAGCTTCTCGTTCAAATGGGCCGTGGATCTTATATCCCCACCAAGTCTGAAGGAGGAGATGAGACCCTTGCTGTAGACTACTTCACTTTTTCATCAAGCATTGCAGACCATCTGAGGGCAGCATCTCTTGTGATTAGTCATGCAGGGTCAGGGAGCATATTTGAGACATTGCGGCATGGTAAGCCATTAATTGTGGTGGTGAATGAAGATTTGATGGACAACCATCAAAGTGAGTTGGCAGAGGAACTAGCAGACAGGAAGCATTTGTACTATGCTCGTACGCGGACACTTCATCGTGTTATAGCAGACATGAATTTGGATTCCCTCATTCCATACCACCCAGGTGATGCCACACCTGTCGCCAAGCTTATCAATCAGTTTCTTGGTTTTGCAGACGACTGA

Protein Analysis

179

Amino Acids

19.61

Weight (kDa)

5.6

Isoelectric Point (pI)

22.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 131, 210
AccII CGCG 1 cut(s) 418
AciI CCGC 2 cut(s) 307, 418
AclWI GGATC 1 cut(s) 169
AcsI RAATTY 1 cut(s) 448
AcuI CTGAAG 1 cut(s) 204
AfaI GTAC 2 cut(s) 404, 415
AfiI CCNNNNNNNGG 1 cut(s) 250
AgsI TTSAA 1 cut(s) 149
AjnI CCWGG 1 cut(s) 475
AleI CACNNNNGTG 1 cut(s) 477
AluBI AGCT 2 cut(s) 139, 502
AluI AGCT 2 cut(s) 139, 502
Alw26I GTCTC 2 cut(s) 191, 293
AlwI GGATC 1 cut(s) 169
AoxI GGCC 1 cut(s) 154
ApeKI GCWGC 1 cut(s) 254
ApoI RAATTY 1 cut(s) 448
AseI ATTAAT 1 cut(s) 323
Asp700I GAANNNNTTC 1 cut(s) 61
AspS9I GGNCC 1 cut(s) 154
AsuHPI GGTGA 2 cut(s) 346, 491
BarI GAAGNNNNNNTAC 2 cut(s) 386, 418
BbsI GAAGAC 1 cut(s) 41
BbvI GCAGC 1 cut(s) 266
BccI CCATC 3 cut(s) 252, 343, 366
BceAI ACGGC 1 cut(s) 141
BciT130I CCWGG 1 cut(s) 477
BciVI GTATCC 1 cut(s) 85
BcoDI GTCTC 2 cut(s) 191, 293
BfaI CTAG 1 cut(s) 383
BfmI CTRYAG 1 cut(s) 207
BfuI GTATCC 1 cut(s) 85
BisI GCNGC 2 cut(s) 255, 308
BlsI GCNGC 2 cut(s) 256, 309
Bme1390I CCNGG 1 cut(s) 477
BmgT120I GGNCC 1 cut(s) 154
BmrFI CCNGG 1 cut(s) 477
BmsI GCATC 3 cut(s) 61, 266, 472
BpiI GAAGAC 1 cut(s) 41
BsaI GGTCTC 1 cut(s) 191
BsaJI CCNNGG 2 cut(s) 157, 475
Bsc4I CCNNNNNNNGG 1 cut(s) 250
Bse3DI GCAATG 2 cut(s) 234, 302
BseBI CCWGG 1 cut(s) 477
BseDI CCNNGG 2 cut(s) 157, 475
BseLI CCNNNNNNNGG 1 cut(s) 250
BseMI GCAATG 2 cut(s) 234, 302
BseMII CTCAG 2 cut(s) 110, 239
BseRI GAGGAG 1 cut(s) 204
BseXI GCAGC 1 cut(s) 266
BseYI CCCAGC 1 cut(s) 135
Bsh1236I CGCG 1 cut(s) 418
BshFI GGCC 1 cut(s) 156
BsiWI CGTACG 1 cut(s) 413
BslI CCNNNNNNNGG 1 cut(s) 250
BsmAI GTCTC 2 cut(s) 191, 293
BsnI GGCC 1 cut(s) 156
Bso31I GGTCTC 1 cut(s) 191
Bsp143I GATC 1 cut(s) 161
BspACI CCGC 2 cut(s) 307, 418
BspANI GGCC 1 cut(s) 156
BspCNI CTCAG 3 cut(s) 4, 109, 240
BspFNI CGCG 1 cut(s) 418
BspPI GGATC 1 cut(s) 169
BspTNI GGTCTC 1 cut(s) 191
BsrDI GCAATG 2 cut(s) 234, 302
BssECI CCNNGG 2 cut(s) 157, 475
BssMI GATC 1 cut(s) 161
BssNAI GTATAC 1 cut(s) 132
Bst1107I GTATAC 1 cut(s) 132
Bst2UI CCWGG 1 cut(s) 477
Bst4CI ACNGT 3 cut(s) 22, 40, 52
BstDEI CTNAG 3 cut(s) 12, 96, 248
BstDSI CCRYGG 1 cut(s) 157
BstFNI CGCG 1 cut(s) 418
BstKTI GATC 1 cut(s) 164
BstMAI GTCTC 2 cut(s) 191, 293
BstMBI GATC 1 cut(s) 161
BstMWI GCNNNNNNNGC 1 cut(s) 316
BstNI CCWGG 1 cut(s) 477
BstSCI CCNGG 1 cut(s) 475
BstSFI CTRYAG 1 cut(s) 207
BstUI CGCG 1 cut(s) 418
BstV1I GCAGC 1 cut(s) 266
BstV2I GAAGAC 1 cut(s) 41
BstX2I RGATCY 1 cut(s) 161
BstYI RGATCY 1 cut(s) 161
BstZ17I GTATAC 1 cut(s) 132
BsuI GTATCC 1 cut(s) 85
BsuRI GGCC 1 cut(s) 156
BtgI CCRYGG 1 cut(s) 157
BtsI GCAGTG 1 cut(s) 93
BtsIMutI CAGTG 1 cut(s) 93
Cfr13I GGNCC 1 cut(s) 154
Csp6I GTAC 2 cut(s) 403, 414
CviAII CATG 3 cut(s) 275, 311, 445
CviJI RGCY 5 cut(s) 17, 139, 156, 319, 502
CviKI_1 RGCY 5 cut(s) 17, 139, 156, 319, 502
CviQI GTAC 2 cut(s) 403, 414
DdeI CTNAG 3 cut(s) 12, 96, 248
DpnI GATC 1 cut(s) 163
DpnII GATC 1 cut(s) 161
Eco31I GGTCTC 1 cut(s) 191
Eco57I CTGAAG 1 cut(s) 204
EcoRII CCWGG 1 cut(s) 475
FaeI CATG 3 cut(s) 278, 314, 448
FaiI YATR 9 cut(s) 132, 168, 276, 293, 312, 408, 437, 446, 469
FatI CATG 3 cut(s) 274, 310, 444
FblI GTMKAC 2 cut(s) 131, 210
Fnu4HI GCNGC 2 cut(s) 255, 308
Fsp4HI GCNGC 2 cut(s) 255, 308
FspBI CTAG 1 cut(s) 383
GluI GCNGC 2 cut(s) 255, 308
GsaI CCCAGC 1 cut(s) 139
HaeIII GGCC 1 cut(s) 156
Hin1II CATG 3 cut(s) 278, 314, 448
HindIII AAGCTT 1 cut(s) 500
HinfI GANTC 1 cut(s) 455
HphI GGTGA 2 cut(s) 346, 491
Hpy166II GTNNAC 2 cut(s) 132, 211
Hpy188I TCNGA 2 cut(s) 184, 249
Hpy188III TCNNGA 1 cut(s) 98
Hpy8I GTNNAC 2 cut(s) 132, 211
HpyAV CCTTC 1 cut(s) 179
HpyCH4III ACNGT 3 cut(s) 22, 40, 52
HpyCH4V TGCA 3 cut(s) 239, 278, 527
HpyF10VI GCNNNNNNNGC 1 cut(s) 316
HpyF3I CTNAG 3 cut(s) 12, 96, 248
Hsp92II CATG 3 cut(s) 278, 314, 448
Kzo9I GATC 1 cut(s) 161
LmnI GCTCC 1 cut(s) 288
LpnPI CCDG 8 cut(s) 83, 149, 264, 270, 376, 462, 489, 504
Lsp1109I GCAGC 1 cut(s) 266
LweI GCATC 3 cut(s) 61, 266, 472
MaeI CTAG 1 cut(s) 383
MaeIII GTNAC 1 cut(s) 46
MalI GATC 1 cut(s) 163
MboI GATC 1 cut(s) 161
MboII GAAGA 3 cut(s) 43, 46, 353
MflI RGATCY 1 cut(s) 161
MluCI AATT 2 cut(s) 324, 448
MmeI TCCRAC 1 cut(s) 34
MnlI CCTC 7 cut(s) 7, 94, 119, 182, 243, 370, 470
MroXI GAANNNNTTC 1 cut(s) 61
MseI TTAA 3 cut(s) 105, 119, 323
MslI CAYNNNNRTG 2 cut(s) 363, 477
MspR9I CCNGG 1 cut(s) 477
MvaI CCWGG 1 cut(s) 477
MvnI CGCG 1 cut(s) 418
MwoI GCNNNNNNNGC 1 cut(s) 316
NdeII GATC 1 cut(s) 161
NlaIII CATG 3 cut(s) 278, 314, 448
NmuCI GTSAC 1 cut(s) 46
OliI CACNNNNGTG 1 cut(s) 477
PdmI GAANNNNTTC 1 cut(s) 61
PfeI GAWTC 1 cut(s) 455
Pfl23II CGTACG 1 cut(s) 413
PkrI GCNGC 2 cut(s) 256, 309
PshBI ATTAAT 1 cut(s) 323
Psp6I CCWGG 1 cut(s) 475
PspFI CCCAGC 1 cut(s) 135
PspGI CCWGG 1 cut(s) 475
PspLI CGTACG 1 cut(s) 413
PspPI GGNCC 1 cut(s) 154
PsuI RGATCY 1 cut(s) 161
RsaI GTAC 2 cut(s) 404, 415
RsaNI GTAC 2 cut(s) 403, 414
RseI CAYNNNNRTG 2 cut(s) 363, 477
SaqAI TTAA 3 cut(s) 105, 119, 323
SatI GCNGC 2 cut(s) 255, 308
Sau3AI GATC 1 cut(s) 161
Sau96I GGNCC 1 cut(s) 154
ScrFI CCNGG 1 cut(s) 477
SetI ASST 5 cut(s) 105, 141, 481, 493, 504
SfaNI GCATC 3 cut(s) 61, 266, 472
SfcI CTRYAG 1 cut(s) 207
SmiMI CAYNNNNRTG 2 cut(s) 363, 477
Sse9I AATT 2 cut(s) 324, 448
SsiI CCGC 2 cut(s) 307, 418
SspMI CTAG 1 cut(s) 383
StyD4I CCNGG 1 cut(s) 475
TaaI ACNGT 3 cut(s) 22, 40, 52
TaqI TCGA 1 cut(s) 29
TasI AATT 2 cut(s) 324, 448
TatI WGTACW 1 cut(s) 402
TauI GCSGC 1 cut(s) 310
TfiI GAWTC 1 cut(s) 455
Tru1I TTAA 3 cut(s) 105, 119, 323
Tru9I TTAA 3 cut(s) 105, 119, 323
TscAI CASTG 1 cut(s) 93
TseFI GTSAC 1 cut(s) 46
TseI GCWGC 1 cut(s) 254
Tsp45I GTSAC 1 cut(s) 46
TspDTI ATGAA 4 cut(s) 216, 354, 416, 461
TspRI CASTG 1 cut(s) 93
VspI ATTAAT 1 cut(s) 323
XapI RAATTY 1 cut(s) 448
XmiI GTMKAC 2 cut(s) 131, 210
XmnI GAANNNNTTC 1 cut(s) 61
XspI CTAG 1 cut(s) 383
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.