Prupe.6G349300_v2.0.a1

Protein CHAPERONE-LIKE PROTEIN OF POR1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0012266
Physical Location & Seq
Forward (+)
29812819 .. 29816386
3568 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G349300.1

Sequence Viewer

Length: 849 bp
ATGGCTTTGGCAATTTCTCATGCTTTTCACTGCCCCAAATTGCAGTTTTCCCAGAGGAATTTCCGCCCTAAAGTCCCAGACTTAAGGTTCCAGCCTTCATTCTTCAGAACAATTCCACAGAATACAAGGATAATTTGTGCGGCTGCGTCTGCAGCTGGAAGTTCTAATCCAGACAGTGACTTAAACCCATATGAGGTTCTCGGTGTGAGCCCCATTGAGGGGTTTGACATGATCAAGGCAGCATATACAAAAAAACACAAGGAGGCTGTAAGGAGCGGTGATCAAGCAACTGCTGCCAGACTGGAGAAAGCATATGACAAAGTCATGATGGCACAGCTAAGTAATAGGAAGAAAGGGGTGACGTTTGGTTCCTTCAAGGTCTCAAAGGACATAAAATATGCTGATAAGCAACCAATTGTACCATGGGGGCCTAGGTTCACCAAGTCTACTGTACAAGATATGCGCATCAACCTGGCAATATCTGCTGTATTTATTGCTTGGCTTCTTATCAAGCGCAATGCTGAATATAAACCCCTGCAGTTTTTAACTTTTGCATTTGTTTATCGGATCTTTGAGAAGTTGAAATCCTTTGAACCACCTGTATCTCCAACATATACAGAAGATGGTGAGGAGGCAGGGAGAGGACTGCAAATGGGAAAACGGCTGCTTCGTTCTCTTGCCCTAGTGTTTGGCTGTATTGCTGTTGCTTCTCTGGGATACACCGGTCTTCTGAATTTGATTGAGTTTACGGGTAGCTTTATTCCTGCTGCTCTTTACAATAACCAGGAATTGATAATCACCACAGCAACTGCAGTCATGCTCTACATTCTGGCATCATATTATAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CPP1-like

Protein Analysis

283

Amino Acids

31.55

Weight (kDa)

9.68

Isoelectric Point (pI)

35.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012266)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08640
fragaria_vesca FvH4_6g01960 FvH4_6g01960
malus_domestica MD09G1286500.v1.1 MD17G1278900.v1.1
prunus_persica Prupe.6G349300_v2.0.a1
pyrus_communis pycom09g19360 pycom17g27650
rosa_chinensis RchiOBHm_Chr3g0449811
rosa_laevigata RLG00000025796 RLG00000025798
rosa_multiflora Rmu_sc0013983.1_g000007
rosa_roxburghii Rroxscaffold_6G00427630
rosa_rugosa Rorug02G0623500
rosa_samantha Rh3AG021700 Rh3BG022400 Rh3CG021000 Rh3DG022100
rosa_wichuraiana Rw3G001780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 464
AccBSI CCGCTC 1 cut(s) 276
AccI GTMKAC 1 cut(s) 446
AciI CCGC 3 cut(s) 64, 140, 276
AclWI GGATC 1 cut(s) 575
AcsI RAATTY 2 cut(s) 58, 733
AcuI CTGAAG 1 cut(s) 88
AfaI GTAC 2 cut(s) 420, 453
AfiI CCNNNNNNNGG 4 cut(s) 193, 217, 218, 219
AflII CTTAAG 1 cut(s) 82
AgeI ACCGGT 1 cut(s) 722
AgsI TTSAA 3 cut(s) 376, 583, 593
AjnI CCWGG 2 cut(s) 471, 783
AluBI AGCT 3 cut(s) 155, 337, 756
AluI AGCT 3 cut(s) 155, 337, 756
Alw26I GTCTC 1 cut(s) 385
AlwI GGATC 1 cut(s) 575
AlwNI CAGNNNCTG 1 cut(s) 809
AoxI GGCC 1 cut(s) 428
ApeKI GCWGC 6 cut(s) 143, 152, 239, 293, 664, 767
ApoI RAATTY 2 cut(s) 58, 733
AsiGI ACCGGT 1 cut(s) 722
AspA2I CCTAGG 1 cut(s) 431
AspLEI GCGC 2 cut(s) 465, 516
AspS9I GGNCC 1 cut(s) 428
AsuHPI GGTGA 5 cut(s) 290, 370, 430, 638, 790
AvrII CCTAGG 1 cut(s) 431
BaeI ACNNNNGTAYC 2 cut(s) 709, 742
BanII GRGCYC 1 cut(s) 212
BbsI GAAGAC 1 cut(s) 719
BbvI GCAGC 6 cut(s) 130, 164, 251, 280, 651, 754
BccI CCATC 2 cut(s) 322, 617
BceAI ACGGC 1 cut(s) 677
BciT130I CCWGG 2 cut(s) 473, 785
BciVI GTATCC 1 cut(s) 710
BclI TGATCA 2 cut(s) 231, 280
BcoDI GTCTC 1 cut(s) 385
BfaI CTAG 2 cut(s) 432, 683
BfmI CTRYAG 3 cut(s) 150, 536, 810
BfrI CTTAAG 1 cut(s) 82
BfuI GTATCC 1 cut(s) 710
BisI GCNGC 7 cut(s) 141, 144, 153, 240, 294, 665, 768
BlnI CCTAGG 1 cut(s) 431
BlsI GCNGC 7 cut(s) 142, 145, 154, 241, 295, 666, 769
Bme1390I CCNGG 2 cut(s) 473, 785
BmgT120I GGNCC 1 cut(s) 428
BmiI GGNNCC 3 cut(s) 89, 370, 429
BmrFI CCNGG 2 cut(s) 473, 785
BmsI GCATC 2 cut(s) 474, 842
BpiI GAAGAC 1 cut(s) 719
BpmI CTGGAG 1 cut(s) 323
BsaI GGTCTC 1 cut(s) 385
BsaJI CCNNGG 2 cut(s) 422, 431
BsaWI WCCGGW 1 cut(s) 722
Bsc4I CCNNNNNNNGG 4 cut(s) 193, 217, 218, 219
Bse118I RCCGGY 1 cut(s) 722
Bse1I ACTGG 1 cut(s) 306
Bse3DI GCAATG 1 cut(s) 523
BseBI CCWGG 2 cut(s) 473, 785
BseDI CCNNGG 2 cut(s) 422, 431
BseLI CCNNNNNNNGG 4 cut(s) 193, 217, 218, 219
BseMI GCAATG 1 cut(s) 523
BseNI ACTGG 1 cut(s) 306
BseRI GAGGAG 1 cut(s) 644
BseXI GCAGC 6 cut(s) 130, 164, 251, 280, 651, 754
BshFI GGCC 1 cut(s) 430
BshTI ACCGGT 1 cut(s) 722
BsiSI CCGG 1 cut(s) 723
BslFI GGGAC 1 cut(s) 59
BslI CCNNNNNNNGG 4 cut(s) 193, 217, 218, 219
BsmAI GTCTC 1 cut(s) 385
BsmFI GGGAC 1 cut(s) 59
BsnI GGCC 1 cut(s) 430
Bso31I GGTCTC 1 cut(s) 385
Bsp1286I GDGCHC 1 cut(s) 212
Bsp1407I TGTACA 1 cut(s) 451
Bsp143I GATC 3 cut(s) 231, 280, 567
Bsp19I CCATGG 1 cut(s) 422
BspACI CCGC 3 cut(s) 64, 140, 276
BspANI GGCC 1 cut(s) 430
BspHI TCATGA 1 cut(s) 324
BspLI GGNNCC 3 cut(s) 89, 370, 429
BspMAI CTGCAG 3 cut(s) 154, 540, 814
BspPI GGATC 1 cut(s) 575
BspTI CTTAAG 1 cut(s) 82
BspTNI GGTCTC 1 cut(s) 385
BsrBI CCGCTC 1 cut(s) 276
BsrDI GCAATG 1 cut(s) 523
BsrFI RCCGGY 1 cut(s) 722
BsrGI TGTACA 1 cut(s) 451
BsrI ACTGG 1 cut(s) 306
BssAI RCCGGY 1 cut(s) 722
BssECI CCNNGG 2 cut(s) 422, 431
BssMI GATC 3 cut(s) 231, 280, 567
BssT1I CCWWGG 2 cut(s) 422, 431
Bst2UI CCWGG 2 cut(s) 473, 785
Bst4CI ACNGT 2 cut(s) 176, 451
BstAFI CTTAAG 1 cut(s) 82
BstAPI GCANNNNNTGC 2 cut(s) 293, 482
BstAUI TGTACA 1 cut(s) 451
BstDEI CTNAG 1 cut(s) 338
BstDSI CCRYGG 1 cut(s) 422
BstHHI GCGC 2 cut(s) 465, 516
BstKTI GATC 3 cut(s) 234, 283, 570
BstMAI GTCTC 1 cut(s) 385
BstMBI GATC 3 cut(s) 231, 280, 567
BstMWI GCNNNNNNNGC 4 cut(s) 149, 152, 293, 482
BstNI CCWGG 2 cut(s) 473, 785
BstSCI CCNGG 2 cut(s) 471, 783
BstSFI CTRYAG 3 cut(s) 150, 536, 810
BstV1I GCAGC 6 cut(s) 130, 164, 251, 280, 651, 754
BstV2I GAAGAC 1 cut(s) 719
BstX2I RGATCY 1 cut(s) 567
BstYI RGATCY 1 cut(s) 567
BsuI GTATCC 1 cut(s) 710
BsuRI GGCC 1 cut(s) 430
BtgI CCRYGG 1 cut(s) 422
BtsI GCAGTG 1 cut(s) 28
BtsIMutI CAGTG 2 cut(s) 28, 181
CaiI CAGNNNCTG 1 cut(s) 809
CciI TCATGA 1 cut(s) 324
CfoI GCGC 2 cut(s) 465, 516
Cfr10I RCCGGY 1 cut(s) 722
Cfr13I GGNCC 1 cut(s) 428
CseI GACGC 1 cut(s) 135
Csp6I GTAC 2 cut(s) 419, 452
CspAI ACCGGT 1 cut(s) 722
CviAII CATG 5 cut(s) 20, 229, 325, 423, 817
CviQI GTAC 2 cut(s) 419, 452
DdeI CTNAG 1 cut(s) 338
DpnI GATC 3 cut(s) 233, 282, 569
DpnII GATC 3 cut(s) 231, 280, 567
EciI GGCGGA 1 cut(s) 53
Eco130I CCWWGG 2 cut(s) 422, 431
Eco24I GRGCYC 1 cut(s) 212
Eco31I GGTCTC 1 cut(s) 385
Eco57I CTGAAG 1 cut(s) 88
EcoO109I RGGNCCY 1 cut(s) 428
EcoRII CCWGG 2 cut(s) 471, 783
EcoT14I CCWWGG 2 cut(s) 422, 431
EcoT38I GRGCYC 1 cut(s) 212
ErhI CCWWGG 2 cut(s) 422, 431
FaeI CATG 5 cut(s) 23, 232, 328, 426, 820
FaqI GGGAC 1 cut(s) 59
FatI CATG 5 cut(s) 19, 228, 324, 422, 816
FauNDI CATATG 2 cut(s) 190, 313
FbaI TGATCA 2 cut(s) 231, 280
FblI GTMKAC 1 cut(s) 446
Fnu4HI GCNGC 7 cut(s) 141, 144, 153, 240, 294, 665, 768
FriOI GRGCYC 1 cut(s) 212
Fsp4HI GCNGC 7 cut(s) 141, 144, 153, 240, 294, 665, 768
FspAI RTGCGCAY 1 cut(s) 464
FspBI CTAG 2 cut(s) 432, 683
FspI TGCGCA 1 cut(s) 464
GlaI GCGC 2 cut(s) 464, 515
GluI GCNGC 7 cut(s) 141, 144, 153, 240, 294, 665, 768
GsuI CTGGAG 1 cut(s) 323
HaeIII GGCC 1 cut(s) 430
HapII CCGG 1 cut(s) 723
HgaI GACGC 1 cut(s) 135
HhaI GCGC 2 cut(s) 465, 516
Hin1II CATG 5 cut(s) 23, 232, 328, 426, 820
Hin6I GCGC 2 cut(s) 463, 514
HinP1I GCGC 2 cut(s) 463, 514
HpaII CCGG 1 cut(s) 723
HphI GGTGA 5 cut(s) 290, 370, 430, 638, 790
Hpy166II GTNNAC 3 cut(s) 438, 447, 747
Hpy188I TCNGA 3 cut(s) 107, 567, 732
Hpy188III TCNNGA 2 cut(s) 170, 325
Hpy8I GTNNAC 3 cut(s) 438, 447, 747
HpyAV CCTTC 2 cut(s) 105, 382
HpyCH4III ACNGT 2 cut(s) 176, 451
HpyCH4IV ACGT 1 cut(s) 362
HpyCH4V TGCA 6 cut(s) 43, 152, 538, 554, 649, 812
HpyF10VI GCNNNNNNNGC 4 cut(s) 149, 152, 293, 482
HpyF3I CTNAG 1 cut(s) 338
HpySE526I ACGT 1 cut(s) 362
Hsp92II CATG 5 cut(s) 23, 232, 328, 426, 820
HspAI GCGC 2 cut(s) 463, 514
Ksp22I TGATCA 2 cut(s) 231, 280
Kzo9I GATC 3 cut(s) 231, 280, 567
LmnI GCTCC 1 cut(s) 273
Lsp1109I GCAGC 6 cut(s) 130, 164, 251, 280, 651, 754
LweI GCATC 2 cut(s) 474, 842
MaeI CTAG 2 cut(s) 432, 683
MaeII ACGT 1 cut(s) 362
MaeIII GTNAC 2 cut(s) 176, 358
MalI GATC 3 cut(s) 233, 282, 569
MbiI CCGCTC 1 cut(s) 276
MboI GATC 3 cut(s) 231, 280, 567
MboII GAAGA 4 cut(s) 94, 361, 632, 719
MfeI CAATTG 1 cut(s) 414
MflI RGATCY 1 cut(s) 567
MhlI GDGCHC 1 cut(s) 212
MluCI AATT 8 cut(s) 12, 38, 58, 111, 132, 414, 733, 788
MmeI TCCRAC 1 cut(s) 632
MnlI CCTC 7 cut(s) 48, 187, 211, 256, 622, 625, 635
MseI TTAA 3 cut(s) 83, 182, 545
MspA1I CMGCKG 1 cut(s) 155
MspCI CTTAAG 1 cut(s) 82
MspI CCGG 1 cut(s) 723
MspR9I CCNGG 2 cut(s) 473, 785
MunI CAATTG 1 cut(s) 414
MvaI CCWGG 2 cut(s) 473, 785
MwoI GCNNNNNNNGC 4 cut(s) 149, 152, 293, 482
NcoI CCATGG 1 cut(s) 422
NdeI CATATG 2 cut(s) 190, 313
NdeII GATC 3 cut(s) 231, 280, 567
NlaIII CATG 5 cut(s) 23, 232, 328, 426, 820
NlaIV GGNNCC 3 cut(s) 89, 370, 429
NmuCI GTSAC 2 cut(s) 176, 358
NsbI TGCGCA 1 cut(s) 464
PagI TCATGA 1 cut(s) 324
PcsI WCGNNNNNNNCGW 1 cut(s) 667
PflFI GACNNNGTC 1 cut(s) 320
PinAI ACCGGT 1 cut(s) 722
PkrI GCNGC 7 cut(s) 142, 145, 154, 241, 295, 666, 769
Psp6I CCWGG 2 cut(s) 471, 783
PspGI CCWGG 2 cut(s) 471, 783
PspN4I GGNNCC 3 cut(s) 89, 370, 429
PspPI GGNCC 1 cut(s) 428
PstI CTGCAG 3 cut(s) 154, 540, 814
PstNI CAGNNNCTG 1 cut(s) 809
PsuI RGATCY 1 cut(s) 567
PsyI GACNNNGTC 1 cut(s) 320
PvuII CAGCTG 1 cut(s) 155
RsaI GTAC 2 cut(s) 420, 453
RsaNI GTAC 2 cut(s) 419, 452
SaqAI TTAA 3 cut(s) 83, 182, 545
SatI GCNGC 7 cut(s) 141, 144, 153, 240, 294, 665, 768
Sau3AI GATC 3 cut(s) 231, 280, 567
Sau96I GGNCC 1 cut(s) 428
ScrFI CCNGG 2 cut(s) 473, 785
SduI GDGCHC 1 cut(s) 212
SfaNI GCATC 2 cut(s) 474, 842
SfcI CTRYAG 3 cut(s) 150, 536, 810
SmlI CTYRAG 1 cut(s) 82
SmoI CTYRAG 1 cut(s) 82
Sse9I AATT 8 cut(s) 12, 38, 58, 111, 132, 414, 733, 788
SsiI CCGC 3 cut(s) 64, 140, 276
SspMI CTAG 2 cut(s) 432, 683
StyD4I CCNGG 2 cut(s) 471, 783
StyI CCWWGG 2 cut(s) 422, 431
TaaI ACNGT 2 cut(s) 176, 451
TaiI ACGT 1 cut(s) 365
TasI AATT 8 cut(s) 12, 38, 58, 111, 132, 414, 733, 788
TatI WGTACW 1 cut(s) 451
TauI GCSGC 1 cut(s) 143
Tru1I TTAA 3 cut(s) 83, 182, 545
Tru9I TTAA 3 cut(s) 83, 182, 545
TscAI CASTG 2 cut(s) 35, 181
TseFI GTSAC 2 cut(s) 176, 358
TseI GCWGC 6 cut(s) 143, 152, 239, 293, 664, 767
Tsp45I GTSAC 2 cut(s) 176, 358
TspDTI ATGAA 1 cut(s) 87
TspRI CASTG 2 cut(s) 35, 181
Tth111I GACNNNGTC 1 cut(s) 320
Vha464I CTTAAG 1 cut(s) 82
XapI RAATTY 2 cut(s) 58, 733
XcmI CCANNNNNNNNNTGG 1 cut(s) 420
XmaJI CCTAGG 1 cut(s) 431
XmiI GTMKAC 1 cut(s) 446
XspI CTAG 2 cut(s) 432, 683
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.