Prupe.6G350900_v2.0.a1

Required for peroxisome biogenesis and for PTS1- and PTS2-dependent protein import into peroxisomes

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0009326
Physical Location & Seq
Reverse (-)
29907301 .. 29911036
3736 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G350900.1

Sequence Viewer

Length: 1182 bp
ATGTTGTTTCAAGTGGGAGGCCAAGGGACTCGTCCCACCTTCTTCGAGATGGCGGCGGCTCAGCAGCTCCCTGCCAGTCTTCGCGCCGCTCTCACCTATTCCATCGGCGTATTAGCTTTACGAAGACCCTTCCTCCATAGGGTGTTAGACTATGAAGACGAATTCTTTTCGTTGCTCATGCTAGTTCTCGAAACTCATAGCTTGAGAACTACAGATGCTTCCTTCTCTGAGTCTCTATATGGATTAAGAAGGCGGGCTGTGAAGATAAAAGCCATGAAGGATGATCCTCGCCTGAACCCAGGTGATGGAATTCAGCATTCTGGGTTAGAAAAGCGCCAAAGAGTTCTGTCAGTTGTATTTTTGGTTGTATTGCCTTACTTTAAGTCGAAATTGCATTCAATCTATAATAAAGAAAGGGAAGCCAGACTTCAAGCAAGCTTATGGGGACACGTTGATGAAAGATTTGATGATGCTGATATATTTGATAGAGGGGAGGATTCTGTTATTCCAAGAGGAAATTTGGATATGGAATCATCAGTTAGAACGCGTTTGACTAGAAAGATCCAGAAATTTATAGGTGCTTGCTATCCTTTGCTACATGCTAGTACTGAAGGATTTTCATTTGCTTATCAGATGTTATACTTGTTGGATGCAACTGGATTTTATTCCTTAGGATTACATGCTCTTGGGATTCATGTCTGTCGAGCTACAGGGCAAGAGCTGATGGATACATCTTCTAGAATTTCAAAAACAAGAAGCCGTGAACGTGAGAGACTTCGTGGTCCTCCATGGTTGAAGGCATTACAAGGAGCATTGCTCAGTGGTACATACACAGTGCTCGATTATGCACAGACTGGGTTAATTGCAGCAGTATTCTTTTTTAAAATGATGGAATGGTGGTACCAATCTGCTGAAGAGAGAATGTCAGCTCCAACCATATACCCTCCACCTCCTCCACCTCCACCTCCCCAGGTTGCCAAAGAGGGGATTCCACTGCCACCCGATAGAACTCTTTGTCCTCTCTGTTCACAGAGGCGTGCGAATCCATCTGTAATTACAGTTTCTGGGTTTGTCTTTTGCTATGCCTGCATTTTCAAGTATGTTTCTCAGTATAAGCGATGTCCAATCACATTGATGCCAACCACCGTCGACCAGATAAGGAGGCTCTTTCACGATGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005778 GO:0005779 GO:0006082 GO:0006464 GO:0006513 GO:0006605 GO:0006625 GO:0006629 GO:0006631 GO:0006635 GO:0006807 GO:0006810 GO:0006886 GO:0006996 GO:0007031 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009062 GO:0009653 GO:0009790 GO:0009987 GO:0015031 GO:0015833 GO:0015919 GO:0016020 GO:0016021 GO:0016042 GO:0016043 GO:0016054 GO:0016558 GO:0016567 GO:0016740 GO:0017038 GO:0019395 GO:0019538 GO:0019752 GO:0019787 GO:0030258 GO:0031090 GO:0031224 GO:0031231 GO:0031300 GO:0031301 GO:0031903 GO:0032446 GO:0032501 GO:0032502 GO:0032787 GO:0032991 GO:0033036 GO:0033365 GO:0034440 GO:0034613 GO:0036211 GO:0042579 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0043574 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044425 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0044743 GO:0045184 GO:0046395 GO:0046907 GO:0048598 GO:0048856 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0055114 GO:0065002 GO:0070647 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0071806 GO:0071840 GO:0072329 GO:0072594 GO:0072662 GO:0072663 GO:0098588 GO:0098805 GO:0140096 GO:1901564 GO:1901575 GO:1990351 GO:1990415 GO:1990429
KEGG Pathways
Metabolic & Signaling
ko04146 map04146
Pfam Domains
Protein Families
Pex2_Pex12 zf-C3HC4_2

Protein Analysis

394

Amino Acids

44.67

Weight (kDa)

9.31

Isoelectric Point (pI)

45.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 780
Acc65I GGTACC 1 cut(s) 900
AccB1I GGYRCC 1 cut(s) 900
AccB7I CCANNNNNTGG 1 cut(s) 305
AccBSI CCGCTC 1 cut(s) 89
AccI GTMKAC 1 cut(s) 1149
AccII CGCG 2 cut(s) 84, 547
AciI CCGC 4 cut(s) 53, 56, 87, 253
AclWI GGATC 2 cut(s) 278, 556
AcsI RAATTY 5 cut(s) 161, 309, 517, 569, 741
AcuI CTGAAG 2 cut(s) 630, 933
AdeI CACNNNGTG 1 cut(s) 1177
AfaI GTAC 3 cut(s) 607, 826, 902
AfiI CCNNNNNNNGG 3 cut(s) 139, 305, 984
AflIII ACRYGT 2 cut(s) 448, 545
AgsI TTSAA 6 cut(s) 11, 399, 431, 747, 796, 1096
AjnI CCWGG 2 cut(s) 298, 969
AloI GAACNNNNNNTCC 2 cut(s) 1000, 1032
AluBI AGCT 7 cut(s) 67, 116, 201, 438, 707, 721, 929
AluI AGCT 7 cut(s) 67, 116, 201, 438, 707, 721, 929
Alw21I GWGCWC 1 cut(s) 840
Alw26I GTCTC 2 cut(s) 237, 766
AlwI GGATC 2 cut(s) 278, 556
AlwNI CAGNNNCTG 1 cut(s) 1064
AoxI GGCC 1 cut(s) 19
ApeKI GCWGC 2 cut(s) 64, 866
ApoI RAATTY 5 cut(s) 161, 309, 517, 569, 741
Asp718I GGTACC 1 cut(s) 900
AspLEI GCGC 2 cut(s) 86, 336
AspS9I GGNCC 1 cut(s) 782
AsuHPI GGTGA 2 cut(s) 85, 314
AvaII GGWCC 1 cut(s) 782
AxyI CCTNAGG 1 cut(s) 670
BanI GGYRCC 1 cut(s) 900
BbsI GAAGAC 3 cut(s) 71, 130, 162
Bbv12I GWGCWC 1 cut(s) 840
BbvI GCAGC 2 cut(s) 76, 878
BccI CCATC 6 cut(s) 43, 110, 299, 718, 883, 1054
BceAI ACGGC 1 cut(s) 744
BciT130I CCWGG 2 cut(s) 300, 971
BciVI GTATCC 1 cut(s) 721
BcoDI GTCTC 2 cut(s) 237, 766
BfaI CTAG 4 cut(s) 182, 555, 603, 738
BfmI CTRYAG 2 cut(s) 210, 708
BfoI RGCGCY 1 cut(s) 337
BfuI GTATCC 1 cut(s) 721
BisI GCNGC 5 cut(s) 54, 57, 65, 87, 867
BlpI GCTNAGC 1 cut(s) 60
BlsI GCNGC 5 cut(s) 55, 58, 66, 88, 868
BmcAI AGTACT 1 cut(s) 607
Bme1390I CCNGG 2 cut(s) 300, 971
Bme18I GGWCC 1 cut(s) 782
BmgT120I GGNCC 1 cut(s) 782
BmiI GGNNCC 1 cut(s) 902
BmrFI CCNGG 2 cut(s) 300, 971
BmrI ACTGGG 1 cut(s) 864
BmsI GCATC 4 cut(s) 205, 460, 640, 1125
BmuI ACTGGG 1 cut(s) 864
BpiI GAAGAC 3 cut(s) 71, 130, 162
BplI GAGNNNNNCTC 2 cut(s) 801, 833
Bpu1102I GCTNAGC 1 cut(s) 60
BpuEI CTTGAG 1 cut(s) 223
BsaJI CCNNGG 4 cut(s) 22, 298, 788, 969
BsaXI ACNNNNNCTCC 2 cut(s) 117, 147
Bsc4I CCNNNNNNNGG 3 cut(s) 139, 305, 984
Bse1I ACTGG 3 cut(s) 75, 661, 859
Bse21I CCTNAGG 1 cut(s) 670
Bse3DI GCAATG 1 cut(s) 812
BseBI CCWGG 2 cut(s) 300, 971
BseDI CCNNGG 4 cut(s) 22, 298, 788, 969
BseGI GGATG 2 cut(s) 286, 655
BseLI CCNNNNNNNGG 3 cut(s) 139, 305, 984
BseMI GCAATG 1 cut(s) 812
BseMII CTCAG 4 cut(s) 74, 219, 832, 1121
BseNI ACTGG 3 cut(s) 75, 661, 859
BseRI GAGGAG 1 cut(s) 942
BseXI GCAGC 2 cut(s) 76, 878
Bsh1236I CGCG 2 cut(s) 84, 547
BshFI GGCC 1 cut(s) 21
BshNI GGYRCC 1 cut(s) 900
BsiHKAI GWGCWC 1 cut(s) 840
BslFI GGGAC 3 cut(s) 18, 40, 459
BslI CCNNNNNNNGG 3 cut(s) 139, 305, 984
BsmAI GTCTC 2 cut(s) 237, 766
BsmFI GGGAC 3 cut(s) 18, 40, 459
BsmI GAATGC 2 cut(s) 316, 394
BsnI GGCC 1 cut(s) 21
Bsp1286I GDGCHC 1 cut(s) 840
Bsp143I GATC 2 cut(s) 283, 561
Bsp1720I GCTNAGC 1 cut(s) 60
Bsp19I CCATGG 1 cut(s) 788
BspACI CCGC 4 cut(s) 53, 56, 87, 253
BspANI GGCC 1 cut(s) 21
BspCNI CTCAG 4 cut(s) 73, 220, 831, 1120
BspFNI CGCG 2 cut(s) 84, 547
BspLI GGNNCC 1 cut(s) 902
BspPI GGATC 2 cut(s) 278, 556
BspT107I GGYRCC 1 cut(s) 900
BsrBI CCGCTC 1 cut(s) 89
BsrDI GCAATG 1 cut(s) 812
BsrI ACTGG 3 cut(s) 75, 661, 859
BssECI CCNNGG 4 cut(s) 22, 298, 788, 969
BssMI GATC 2 cut(s) 283, 561
BssT1I CCWWGG 2 cut(s) 22, 788
Bst2UI CCWGG 2 cut(s) 300, 971
Bst4CI ACNGT 3 cut(s) 835, 1060, 1147
Bst6I CTCTTC 1 cut(s) 909
BstC8I GCNNGC 5 cut(s) 255, 436, 583, 1038, 1087
BstDEI CTNAG 5 cut(s) 60, 228, 670, 818, 1107
BstDSI CCRYGG 1 cut(s) 788
BstF5I GGATG 2 cut(s) 286, 655
BstFNI CGCG 2 cut(s) 84, 547
BstH2I RGCGCY 1 cut(s) 337
BstHHI GCGC 2 cut(s) 86, 336
BstKTI GATC 2 cut(s) 286, 564
BstMAI GTCTC 2 cut(s) 237, 766
BstMBI GATC 2 cut(s) 283, 561
BstMWI GCNNNNNNNGC 1 cut(s) 1086
BstNI CCWGG 2 cut(s) 300, 971
BstNSI RCATGY 2 cut(s) 602, 683
BstSCI CCNGG 2 cut(s) 298, 969
BstSFI CTRYAG 2 cut(s) 210, 708
BstUI CGCG 2 cut(s) 84, 547
BstV1I GCAGC 2 cut(s) 76, 878
BstV2I GAAGAC 3 cut(s) 71, 130, 162
BstX2I RGATCY 1 cut(s) 561
BstYI RGATCY 1 cut(s) 561
Bsu36I CCTNAGG 1 cut(s) 670
BsuI GTATCC 1 cut(s) 721
BsuRI GGCC 1 cut(s) 21
BtgI CCRYGG 1 cut(s) 788
BtgZI GCGATG 1 cut(s) 1132
BtsCI GGATG 2 cut(s) 286, 655
BtsI GCAGTG 1 cut(s) 992
BtsIMutI CAGTG 3 cut(s) 826, 840, 992
Cac8I GCNNGC 5 cut(s) 255, 436, 583, 1038, 1087
CaiI CAGNNNCTG 1 cut(s) 1064
CfoI GCGC 2 cut(s) 86, 336
Cfr13I GGNCC 1 cut(s) 782
Csp6I GTAC 3 cut(s) 606, 825, 901
CviAII CATG 6 cut(s) 178, 274, 599, 680, 695, 789
CviQI GTAC 3 cut(s) 606, 825, 901
DdeI CTNAG 5 cut(s) 60, 228, 670, 818, 1107
DpnI GATC 2 cut(s) 285, 563
DpnII GATC 2 cut(s) 283, 561
DraI TTTAAA 1 cut(s) 883
DraIII CACNNNGTG 1 cut(s) 1177
DrdI GACNNNNNNGTC 1 cut(s) 780
DseDI GACNNNNNNGTC 1 cut(s) 780
Eam1104I CTCTTC 1 cut(s) 909
EarI CTCTTC 1 cut(s) 909
Eco130I CCWWGG 2 cut(s) 22, 788
Eco47I GGWCC 1 cut(s) 782
Eco57I CTGAAG 2 cut(s) 630, 933
Eco81I CCTNAGG 1 cut(s) 670
EcoRI GAATTC 2 cut(s) 161, 309
EcoRII CCWGG 2 cut(s) 298, 969
EcoT14I CCWWGG 2 cut(s) 22, 788
ErhI CCWWGG 2 cut(s) 22, 788
FaeI CATG 6 cut(s) 181, 277, 602, 683, 698, 792
FalI AAGNNNNNCTT 2 cut(s) 411, 443
FaqI GGGAC 3 cut(s) 18, 40, 459
FatI CATG 6 cut(s) 177, 273, 598, 679, 694, 788
FauI CCCGC 1 cut(s) 246
FblI GTMKAC 1 cut(s) 1149
Fnu4HI GCNGC 5 cut(s) 54, 57, 65, 87, 867
FokI GGATG 2 cut(s) 293, 662
Fsp4HI GCNGC 5 cut(s) 54, 57, 65, 87, 867
FspBI CTAG 4 cut(s) 182, 555, 603, 738
GlaI GCGC 2 cut(s) 85, 335
GluI GCNGC 5 cut(s) 54, 57, 65, 87, 867
HaeII RGCGCY 1 cut(s) 337
HaeIII GGCC 1 cut(s) 21
HhaI GCGC 2 cut(s) 86, 336
Hin1II CATG 6 cut(s) 181, 277, 602, 683, 698, 792
Hin6I GCGC 2 cut(s) 84, 334
HinP1I GCGC 2 cut(s) 84, 334
HincII GTYRAC 1 cut(s) 1150
HindII GTYRAC 1 cut(s) 1150
HindIII AAGCTT 1 cut(s) 436
HinfI GANTC 7 cut(s) 28, 230, 497, 530, 691, 988, 1042
HphI GGTGA 2 cut(s) 85, 314
Hpy166II GTNNAC 3 cut(s) 764, 1028, 1150
Hpy188I TCNGA 2 cut(s) 229, 633
Hpy188III TCNNGA 5 cut(s) 46, 188, 565, 738, 1172
Hpy8I GTNNAC 3 cut(s) 764, 1028, 1150
Hpy99I CGWCG 1 cut(s) 1151
HpyAV CCTTC 7 cut(s) 49, 139, 232, 243, 271, 605, 790
HpyCH4III ACNGT 3 cut(s) 835, 1060, 1147
HpyCH4IV ACGT 2 cut(s) 450, 766
HpyCH4V TGCA 5 cut(s) 394, 653, 848, 866, 1089
HpyF10VI GCNNNNNNNGC 1 cut(s) 1086
HpyF3I CTNAG 5 cut(s) 60, 228, 670, 818, 1107
HpySE526I ACGT 2 cut(s) 450, 766
Hsp92II CATG 6 cut(s) 181, 277, 602, 683, 698, 792
HspAI GCGC 2 cut(s) 84, 334
KpnI GGTACC 1 cut(s) 904
Kzo9I GATC 2 cut(s) 283, 561
LmnI GCTCC 3 cut(s) 72, 809, 934
Lsp1109I GCAGC 2 cut(s) 76, 878
LweI GCATC 4 cut(s) 205, 460, 640, 1125
MaeI CTAG 4 cut(s) 182, 555, 603, 738
MaeII ACGT 2 cut(s) 450, 766
MalI GATC 2 cut(s) 285, 563
MbiI CCGCTC 1 cut(s) 89
MboI GATC 2 cut(s) 283, 561
MboII GAAGA 7 cut(s) 34, 71, 135, 167, 274, 726, 926
MflI RGATCY 1 cut(s) 561
MhlI GDGCHC 1 cut(s) 840
MluCI AATT 8 cut(s) 161, 309, 389, 517, 569, 741, 861, 1053
MluI ACGCGT 1 cut(s) 545
MlyI GAGTC 2 cut(s) 22, 239
MmeI TCCRAC 2 cut(s) 627, 956
MseI TTAA 4 cut(s) 245, 381, 860, 882
MslI CAYNNNNRTG 2 cut(s) 453, 1133
MspR9I CCNGG 2 cut(s) 300, 971
Mva1269I GAATGC 2 cut(s) 316, 394
MvaI CCWGG 2 cut(s) 300, 971
MvnI CGCG 2 cut(s) 84, 547
MwoI GCNNNNNNNGC 1 cut(s) 1086
NcoI CCATGG 1 cut(s) 788
NdeII GATC 2 cut(s) 283, 561
NlaIII CATG 6 cut(s) 181, 277, 602, 683, 698, 792
NlaIV GGNNCC 1 cut(s) 902
NspI RCATGY 2 cut(s) 602, 683
PctI GAATGC 2 cut(s) 316, 394
PfeI GAWTC 5 cut(s) 497, 530, 691, 988, 1042
PflMI CCANNNNNTGG 1 cut(s) 305
PkrI GCNGC 5 cut(s) 55, 58, 66, 88, 868
PleI GAGTC 2 cut(s) 22, 238
PpsI GAGTC 2 cut(s) 22, 238
Psp6I CCWGG 2 cut(s) 298, 969
PspGI CCWGG 2 cut(s) 298, 969
PspN4I GGNNCC 1 cut(s) 902
PspPI GGNCC 1 cut(s) 782
PstNI CAGNNNCTG 1 cut(s) 1064
PsuI RGATCY 1 cut(s) 561
RsaI GTAC 3 cut(s) 607, 826, 902
RsaNI GTAC 3 cut(s) 606, 825, 901
RseI CAYNNNNRTG 2 cut(s) 453, 1133
SalI GTCGAC 1 cut(s) 1148
SaqAI TTAA 4 cut(s) 245, 381, 860, 882
SatI GCNGC 5 cut(s) 54, 57, 65, 87, 867
Sau3AI GATC 2 cut(s) 283, 561
Sau96I GGNCC 1 cut(s) 782
ScaI AGTACT 1 cut(s) 607
SchI GAGTC 2 cut(s) 22, 239
ScrFI CCNGG 2 cut(s) 300, 971
SduI GDGCHC 1 cut(s) 840
SfaNI GCATC 4 cut(s) 205, 460, 640, 1125
SfcI CTRYAG 2 cut(s) 210, 708
SinI GGWCC 1 cut(s) 782
SmiMI CAYNNNNRTG 2 cut(s) 453, 1133
SmlI CTYRAG 1 cut(s) 202
SmoI CTYRAG 1 cut(s) 202
Sse9I AATT 8 cut(s) 161, 309, 389, 517, 569, 741, 861, 1053
SsiI CCGC 4 cut(s) 53, 56, 87, 253
SspMI CTAG 4 cut(s) 182, 555, 603, 738
StyD4I CCNGG 2 cut(s) 298, 969
StyI CCWWGG 2 cut(s) 22, 788
TaaI ACNGT 3 cut(s) 835, 1060, 1147
TaiI ACGT 2 cut(s) 453, 769
TaqI TCGA 6 cut(s) 45, 189, 386, 703, 840, 1149
TasI AATT 8 cut(s) 161, 309, 389, 517, 569, 741, 861, 1053
TatI WGTACW 1 cut(s) 605
TauI GCSGC 3 cut(s) 56, 59, 89
TfiI GAWTC 5 cut(s) 497, 530, 691, 988, 1042
Tru1I TTAA 4 cut(s) 245, 381, 860, 882
Tru9I TTAA 4 cut(s) 245, 381, 860, 882
TscAI CASTG 3 cut(s) 826, 840, 999
TseI GCWGC 2 cut(s) 64, 866
TspDTI ATGAA 5 cut(s) 168, 290, 471, 609, 683
TspRI CASTG 3 cut(s) 826, 840, 999
Van91I CCANNNNNTGG 1 cut(s) 305
VpaK11BI GGWCC 1 cut(s) 782
XapI RAATTY 5 cut(s) 161, 309, 517, 569, 741
XbaI TCTAGA 1 cut(s) 737
XceI RCATGY 2 cut(s) 602, 683
XmiI GTMKAC 1 cut(s) 1149
XspI CTAG 4 cut(s) 182, 555, 603, 738
ZrmI AGTACT 1 cut(s) 607
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.