Prupe.6G354200_v2.0.a1

Belongs to the 'GDSL' lipolytic enzyme family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
30120249 .. 30122218
1970 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G354200.1

Sequence Viewer

Length: 1218 bp
ATGCTCTATCAAACTTCCACATTACCAAGCTCATCAGCATCATTGTTCGATCATAGGCAAGATATAGTCTTTTTGTTCTGTTTTGCTATTTTAAAAACCAACGACTCCTCCATGGCATCGGCTAGCTATTTGGCTTTGGGTTCATTGGCCATCTTTGGTCTGGCCATGGCATTGGGAACTTTGAGCTCCCAAGCTGAGGGTCGGGCCTTTTTTGTGTTTGGAGACTCACTTGTTGACAATGGCAACAACAACTACTTAGCCACCACAGCTCGTGCTGACTCTCCTCCTTATGGCATTGACTATCCAACTGGTCGACCCACTGGCCGTTTCTCCAATGGCTTCAACATCCCTGATTTTATCAGCCAGCAACTTGGTGCAGAATCCACATTGCCATATTTGAGTCCAGAGCTCACTGGACAGAAGCTACTAGTTGGTGCCAACTTTGCCTCTGCTGGCATTGGCATCCTCAATGACACTGGAATTCAGTTTGTAAACATAATAAGAATGTCCAGGCAATTGGAATACTTTCAACAATACCAGCAAAGGGTGAGTGCCCTCATCGGAACTCAACGCACCAAGCAGCTTGTGAATCAAGCACTTGTCCTCCTCACCGTCGGAGGCAACGACTTTGTGAACAACTACTATCTGGTGCCCTTCTCTGCAAGATCACGCCAGTATGATCTCCCGGATTATGTCAAACTTCTCATTTCGGAGCTCAAAAAACTTCTCTTGAGAATGTATGACCTCGGAACACGAAGAGTTCTGGTGACAGGTACCGGGCCGCTAGGCTGCGTGCCGGCAGAATTGGCGCAGCGAAGCAGGAACGGCGAGTGTTCAGCTGAGCTGCAAAGAGCCGCGTCTTTGTACAACCCTCAACTCGTTCAGATGCTAAAATCACTCAACAGCCAACTTGGTTCTGATGTCTTCATTGCTGCCAACACACAGCAGACGCGCAACGATTTCATAAGCAACCCTCAAGCATTTGGGTTTTCTACATCAAAGATTGCATGCTGTGGACAGGGACCGTACAATGGGTTAGGATTGTGCACGGTGGCCTCGAACTTGTGCCCAAACAGAGGCCGATACGCTTTCTGGGATGCATTTCACCCATCAGAAAAGGCAAACAAACTGATCGTTCAGAACATTTTGACGGGGTCTACCAAGTACATGGACCCCATGAATCTCAGCACCATCTTAGCTTTGGATTCCAGGACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

406

Amino Acids

44.23

Weight (kDa)

8.75

Isoelectric Point (pI)

39.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 773
AccB1I GGYRCC 3 cut(s) 434, 649, 773
AccI GTMKAC 2 cut(s) 313, 1157
AccII CGCG 2 cut(s) 857, 952
AciI CCGC 2 cut(s) 782, 855
AcoI YGGCCR 3 cut(s) 147, 162, 322
AcsI RAATTY 1 cut(s) 480
AfaI GTAC 4 cut(s) 775, 866, 1028, 1166
AfiI CCNNNNNNNGG 5 cut(s) 196, 290, 544, 1031, 1076
AgsI TTSAA 2 cut(s) 343, 530
AhlI ACTAGT 1 cut(s) 427
AjnI CCWGG 2 cut(s) 509, 1208
Alw21I GWGCWC 4 cut(s) 188, 411, 717, 1049
Alw26I GTCTC 1 cut(s) 216
Alw44I GTGCAC 1 cut(s) 1045
AoxI GGCC 7 cut(s) 147, 162, 204, 322, 779, 1053, 1078
ApaLI GTGCAC 1 cut(s) 1045
ApeKI GCWGC 5 cut(s) 580, 789, 811, 844, 932
ApoI RAATTY 1 cut(s) 480
Asp700I GAANNNNTTC 1 cut(s) 525
Asp718I GGTACC 1 cut(s) 773
AspLEI GCGC 2 cut(s) 811, 954
AspS9I GGNCC 5 cut(s) 204, 779, 1022, 1171, 1212
AsuC2I CCSGG 2 cut(s) 686, 778
AsuHPI GGTGA 4 cut(s) 559, 601, 778, 1097
AsuNHI GCTAGC 1 cut(s) 122
AvaII GGWCC 3 cut(s) 1022, 1171, 1212
BaeGI GKGCMC 4 cut(s) 556, 654, 1049, 1070
BalI TGGCCA 2 cut(s) 149, 164
BanI GGYRCC 3 cut(s) 434, 649, 773
BanII GRGCYC 3 cut(s) 188, 411, 717
BauI CACGAG 1 cut(s) 270
BbsI GAAGAC 1 cut(s) 916
Bbv12I GWGCWC 4 cut(s) 188, 411, 717, 1049
BbvCI CCTCAGC 1 cut(s) 195
BbvI GCAGC 5 cut(s) 592, 776, 823, 831, 919
BccI CCATC 3 cut(s) 158, 1117, 1199
BceAI ACGGC 2 cut(s) 309, 841
BciT130I CCWGG 2 cut(s) 511, 1210
BcnI CCSGG 2 cut(s) 686, 778
BcoDI GTCTC 1 cut(s) 216
BcuI ACTAGT 1 cut(s) 427
BfaI CTAG 3 cut(s) 123, 428, 785
BisI GCNGC 7 cut(s) 581, 782, 790, 812, 845, 855, 933
BlpI GCTNAGC 1 cut(s) 840
BlsI GCNGC 7 cut(s) 582, 783, 791, 813, 846, 856, 934
Bme1390I CCNGG 4 cut(s) 511, 686, 778, 1210
Bme18I GGWCC 3 cut(s) 1022, 1171, 1212
BmgT120I GGNCC 5 cut(s) 204, 779, 1022, 1171, 1212
BmiI GGNNCC 5 cut(s) 436, 651, 775, 1023, 1173
BmrFI CCNGG 4 cut(s) 511, 686, 778, 1210
BmsI GCATC 5 cut(s) 47, 125, 471, 876, 1087
BmtI GCTAGC 1 cut(s) 126
BpiI GAAGAC 1 cut(s) 916
Bpu10I CCTNAGC 1 cut(s) 195
Bpu1102I GCTNAGC 1 cut(s) 840
BpuEI CTTGAG 2 cut(s) 751, 960
BpuMI CCSGG 2 cut(s) 686, 778
BsaJI CCNNGG 3 cut(s) 111, 165, 745
BsaXI ACNNNNNCTCC 4 cut(s) 92, 122, 588, 618
Bsc4I CCNNNNNNNGG 5 cut(s) 196, 290, 544, 1031, 1076
Bse118I RCCGGY 1 cut(s) 796
Bse1I ACTGG 5 cut(s) 313, 325, 418, 481, 673
Bse3DI GCAATG 2 cut(s) 386, 927
BseBI CCWGG 2 cut(s) 511, 1210
BseDI CCNNGG 3 cut(s) 111, 165, 745
BseGI GGATG 3 cut(s) 345, 462, 1102
BseLI CCNNNNNNNGG 5 cut(s) 196, 290, 544, 1031, 1076
BseMI GCAATG 2 cut(s) 386, 927
BseMII CTCAG 3 cut(s) 186, 831, 1198
BseNI ACTGG 5 cut(s) 313, 325, 418, 481, 673
BseRI GAGGAG 3 cut(s) 97, 273, 596
BseSI GKGCMC 4 cut(s) 556, 654, 1049, 1070
BseXI GCAGC 5 cut(s) 592, 776, 823, 831, 919
BsgI GTGCAG 1 cut(s) 396
Bsh1236I CGCG 2 cut(s) 857, 952
BshFI GGCC 7 cut(s) 149, 164, 206, 324, 781, 1055, 1080
BshNI GGYRCC 3 cut(s) 434, 649, 773
BsiHKAI GWGCWC 4 cut(s) 188, 411, 717, 1049
BsiSI CCGG 3 cut(s) 686, 777, 797
BslFI GGGAC 1 cut(s) 1035
BslI CCNNNNNNNGG 5 cut(s) 196, 290, 544, 1031, 1076
BsmAI GTCTC 1 cut(s) 216
BsmFI GGGAC 1 cut(s) 1035
BsnI GGCC 7 cut(s) 149, 164, 206, 324, 781, 1055, 1080
Bsp1286I GDGCHC 7 cut(s) 188, 411, 556, 654, 717, 1049, 1070
Bsp1407I TGTACA 1 cut(s) 864
Bsp143I GATC 4 cut(s) 49, 665, 679, 1131
Bsp1720I GCTNAGC 1 cut(s) 840
Bsp19I CCATGG 2 cut(s) 111, 165
BspACI CCGC 2 cut(s) 782, 855
BspANI GGCC 7 cut(s) 149, 164, 206, 324, 781, 1055, 1080
BspCNI CTCAG 3 cut(s) 187, 832, 1197
BspFNI CGCG 2 cut(s) 857, 952
BspLI GGNNCC 5 cut(s) 436, 651, 775, 1023, 1173
BspOI GCTAGC 1 cut(s) 126
BspT107I GGYRCC 3 cut(s) 434, 649, 773
BsrDI GCAATG 2 cut(s) 386, 927
BsrFI RCCGGY 1 cut(s) 796
BsrGI TGTACA 1 cut(s) 864
BsrI ACTGG 5 cut(s) 313, 325, 418, 481, 673
BssAI RCCGGY 1 cut(s) 796
BssECI CCNNGG 3 cut(s) 111, 165, 745
BssMI GATC 4 cut(s) 49, 665, 679, 1131
BssSI CACGAG 1 cut(s) 270
BssT1I CCWWGG 2 cut(s) 111, 165
Bst2BI CACGAG 1 cut(s) 270
Bst2UI CCWGG 2 cut(s) 511, 1210
Bst4CI ACNGT 3 cut(s) 613, 1026, 1051
Bst6I CTCTTC 1 cut(s) 751
BstAUI TGTACA 1 cut(s) 864
BstC8I GCNNGC 6 cut(s) 124, 365, 454, 794, 798, 1009
BstDEI CTNAG 5 cut(s) 195, 256, 840, 1184, 1195
BstDSI CCRYGG 2 cut(s) 111, 165
BstF5I GGATG 3 cut(s) 345, 462, 1102
BstFNI CGCG 2 cut(s) 857, 952
BstHHI GCGC 2 cut(s) 811, 954
BstKTI GATC 4 cut(s) 52, 668, 682, 1134
BstMAI GTCTC 1 cut(s) 216
BstMBI GATC 4 cut(s) 49, 665, 679, 1131
BstMWI GCNNNNNNNGC 4 cut(s) 266, 443, 806, 825
BstNI CCWGG 2 cut(s) 511, 1210
BstNSI RCATGY 1 cut(s) 1011
BstSCI CCNGG 4 cut(s) 509, 684, 776, 1208
BstSLI GKGCMC 4 cut(s) 556, 654, 1049, 1070
BstUI CGCG 2 cut(s) 857, 952
BstV1I GCAGC 5 cut(s) 592, 776, 823, 831, 919
BstV2I GAAGAC 1 cut(s) 916
BstXI CCANNNNNNTGG 4 cut(s) 172, 371, 517, 1168
BsuRI GGCC 7 cut(s) 149, 164, 206, 324, 781, 1055, 1080
BtgI CCRYGG 2 cut(s) 111, 165
BtsCI GGATG 3 cut(s) 345, 462, 1102
BtsIMutI CAGTG 3 cut(s) 318, 411, 474
Cac8I GCNNGC 6 cut(s) 124, 365, 454, 794, 798, 1009
CfoI GCGC 2 cut(s) 811, 954
Cfr10I RCCGGY 1 cut(s) 796
Cfr13I GGNCC 5 cut(s) 204, 779, 1022, 1171, 1212
CseI GACGC 2 cut(s) 846, 958
Csp6I GTAC 4 cut(s) 774, 865, 1027, 1165
CviAII CATG 5 cut(s) 112, 166, 1008, 1168, 1177
CviQI GTAC 4 cut(s) 774, 865, 1027, 1165
DdeI CTNAG 5 cut(s) 195, 256, 840, 1184, 1195
DpnI GATC 4 cut(s) 51, 667, 681, 1133
DpnII GATC 4 cut(s) 49, 665, 679, 1131
DraI TTTAAA 1 cut(s) 93
EaeI YGGCCR 3 cut(s) 147, 162, 322
Eam1104I CTCTTC 1 cut(s) 751
EarI CTCTTC 1 cut(s) 751
Ecl136II GAGCTC 3 cut(s) 186, 409, 715
Eco130I CCWWGG 2 cut(s) 111, 165
Eco24I GRGCYC 3 cut(s) 188, 411, 717
Eco47I GGWCC 3 cut(s) 1022, 1171, 1212
Eco53kI GAGCTC 3 cut(s) 186, 409, 715
EcoICRI GAGCTC 3 cut(s) 186, 409, 715
EcoO109I RGGNCCY 1 cut(s) 1212
EcoRI GAATTC 1 cut(s) 480
EcoRII CCWGG 2 cut(s) 509, 1208
EcoT14I CCWWGG 2 cut(s) 111, 165
EcoT22I ATGCAT 1 cut(s) 1102
EcoT38I GRGCYC 3 cut(s) 188, 411, 717
ErhI CCWWGG 2 cut(s) 111, 165
FaeI CATG 5 cut(s) 115, 169, 1011, 1171, 1180
FaqI GGGAC 1 cut(s) 1035
FatI CATG 5 cut(s) 111, 165, 1007, 1167, 1176
FblI GTMKAC 2 cut(s) 313, 1157
Fnu4HI GCNGC 7 cut(s) 581, 782, 790, 812, 845, 855, 933
FokI GGATG 3 cut(s) 332, 449, 1109
FriOI GRGCYC 3 cut(s) 188, 411, 717
Fsp4HI GCNGC 7 cut(s) 581, 782, 790, 812, 845, 855, 933
FspBI CTAG 3 cut(s) 123, 428, 785
GlaI GCGC 2 cut(s) 810, 953
GluI GCNGC 7 cut(s) 581, 782, 790, 812, 845, 855, 933
HaeIII GGCC 7 cut(s) 149, 164, 206, 324, 781, 1055, 1080
HapII CCGG 3 cut(s) 686, 777, 797
HgaI GACGC 2 cut(s) 846, 958
HhaI GCGC 2 cut(s) 811, 954
Hin1II CATG 5 cut(s) 115, 169, 1011, 1171, 1180
Hin6I GCGC 2 cut(s) 809, 952
HinP1I GCGC 2 cut(s) 809, 952
HincII GTYRAC 2 cut(s) 235, 314
HindII GTYRAC 2 cut(s) 235, 314
HinfI GANTC 8 cut(s) 104, 224, 278, 380, 400, 589, 1180, 1205
HpaII CCGG 3 cut(s) 686, 777, 797
HphI GGTGA 4 cut(s) 559, 601, 778, 1097
Hpy166II GTNNAC 7 cut(s) 235, 314, 493, 634, 1016, 1047, 1158
Hpy188I TCNGA 8 cut(s) 563, 617, 712, 749, 885, 919, 1114, 1140
Hpy188III TCNNGA 2 cut(s) 404, 730
Hpy8I GTNNAC 7 cut(s) 235, 314, 493, 634, 1016, 1047, 1158
Hpy99I CGWCG 1 cut(s) 617
HpyAV CCTTC 1 cut(s) 664
HpyCH4III ACNGT 3 cut(s) 613, 1026, 1051
HpyCH4V TGCA 6 cut(s) 377, 662, 847, 1007, 1047, 1100
HpyF10VI GCNNNNNNNGC 4 cut(s) 266, 443, 806, 825
HpyF3I CTNAG 5 cut(s) 195, 256, 840, 1184, 1195
Hsp92II CATG 5 cut(s) 115, 169, 1011, 1171, 1180
HspAI GCGC 2 cut(s) 809, 952
KpnI GGTACC 1 cut(s) 777
KroI GCCGGC 1 cut(s) 796
KroNI GCCGGC 1 cut(s) 798
Kzo9I GATC 4 cut(s) 49, 665, 679, 1131
LmnI GCTCC 2 cut(s) 191, 712
Lsp1109I GCAGC 5 cut(s) 592, 776, 823, 831, 919
LweI GCATC 5 cut(s) 47, 125, 471, 876, 1087
MaeI CTAG 3 cut(s) 123, 428, 785
MaeIII GTNAC 1 cut(s) 766
MalI GATC 4 cut(s) 51, 667, 681, 1133
MboI GATC 4 cut(s) 49, 665, 679, 1131
MboII GAAGA 2 cut(s) 768, 916
MfeI CAATTG 1 cut(s) 515
MhlI GDGCHC 7 cut(s) 188, 411, 556, 654, 717, 1049, 1070
MlsI TGGCCA 2 cut(s) 149, 164
MluCI AATT 3 cut(s) 480, 515, 803
MluNI TGGCCA 2 cut(s) 149, 164
MlyI GAGTC 4 cut(s) 98, 218, 272, 409
MmeI TCCRAC 2 cut(s) 329, 595
Mox20I TGGCCA 2 cut(s) 149, 164
Mph1103I ATGCAT 1 cut(s) 1102
MroNI GCCGGC 1 cut(s) 796
MroXI GAANNNNTTC 1 cut(s) 525
MscI TGGCCA 2 cut(s) 149, 164
MseI TTAA 1 cut(s) 92
Msp20I TGGCCA 2 cut(s) 149, 164
MspA1I CMGCKG 1 cut(s) 839
MspI CCGG 3 cut(s) 686, 777, 797
MspR9I CCNGG 4 cut(s) 511, 686, 778, 1210
MunI CAATTG 1 cut(s) 515
MvaI CCWGG 2 cut(s) 511, 1210
MvnI CGCG 2 cut(s) 857, 952
MwoI GCNNNNNNNGC 4 cut(s) 266, 443, 806, 825
NaeI GCCGGC 1 cut(s) 798
NciI CCSGG 2 cut(s) 686, 778
NcoI CCATGG 2 cut(s) 111, 165
NdeII GATC 4 cut(s) 49, 665, 679, 1131
NgoMIV GCCGGC 1 cut(s) 796
NheI GCTAGC 1 cut(s) 122
NlaIII CATG 5 cut(s) 115, 169, 1011, 1171, 1180
NlaIV GGNNCC 5 cut(s) 436, 651, 775, 1023, 1173
NmuCI GTSAC 1 cut(s) 766
NsiI ATGCAT 1 cut(s) 1102
NspI RCATGY 1 cut(s) 1011
PaeI GCATGC 1 cut(s) 1011
PcsI WCGNNNNNNNCGW 2 cut(s) 621, 1055
PdiI GCCGGC 1 cut(s) 798
PdmI GAANNNNTTC 1 cut(s) 525
PfeI GAWTC 4 cut(s) 380, 589, 1180, 1205
PflFI GACNNNGTC 1 cut(s) 1153
PfoI TCCNGGA 2 cut(s) 684, 1208
PkrI GCNGC 7 cut(s) 582, 783, 791, 813, 846, 856, 934
PleI GAGTC 4 cut(s) 98, 218, 272, 408
PpsI GAGTC 4 cut(s) 98, 218, 272, 408
PpuMI RGGWCCY 1 cut(s) 1212
Psp124BI GAGCTC 3 cut(s) 188, 411, 717
Psp5II RGGWCCY 1 cut(s) 1212
Psp6I CCWGG 2 cut(s) 509, 1208
PspGI CCWGG 2 cut(s) 509, 1208
PspN4I GGNNCC 5 cut(s) 436, 651, 775, 1023, 1173
PspPI GGNCC 5 cut(s) 204, 779, 1022, 1171, 1212
PspPPI RGGWCCY 1 cut(s) 1212
PsyI GACNNNGTC 1 cut(s) 1153
PvuII CAGCTG 1 cut(s) 839
RsaI GTAC 4 cut(s) 775, 866, 1028, 1166
RsaNI GTAC 4 cut(s) 774, 865, 1027, 1165
SacI GAGCTC 3 cut(s) 188, 411, 717
SalI GTCGAC 1 cut(s) 312
SaqAI TTAA 1 cut(s) 92
SatI GCNGC 7 cut(s) 581, 782, 790, 812, 845, 855, 933
Sau3AI GATC 4 cut(s) 49, 665, 679, 1131
Sau96I GGNCC 5 cut(s) 204, 779, 1022, 1171, 1212
SchI GAGTC 4 cut(s) 98, 218, 272, 409
ScrFI CCNGG 4 cut(s) 511, 686, 778, 1210
SduI GDGCHC 7 cut(s) 188, 411, 556, 654, 717, 1049, 1070
SfaNI GCATC 5 cut(s) 47, 125, 471, 876, 1087
SinI GGWCC 3 cut(s) 1022, 1171, 1212
SmlI CTYRAG 2 cut(s) 730, 975
SmoI CTYRAG 2 cut(s) 730, 975
SpeI ACTAGT 1 cut(s) 427
SphI GCATGC 1 cut(s) 1011
Sse9I AATT 3 cut(s) 480, 515, 803
SsiI CCGC 2 cut(s) 782, 855
SspMI CTAG 3 cut(s) 123, 428, 785
SstI GAGCTC 3 cut(s) 188, 411, 717
StyD4I CCNGG 4 cut(s) 509, 684, 776, 1208
StyI CCWWGG 2 cut(s) 111, 165
TaaI ACNGT 3 cut(s) 613, 1026, 1051
TaqI TCGA 3 cut(s) 48, 313, 1058
TasI AATT 3 cut(s) 480, 515, 803
TatI WGTACW 2 cut(s) 864, 1164
TauI GCSGC 2 cut(s) 784, 857
TfiI GAWTC 4 cut(s) 380, 589, 1180, 1205
Tru1I TTAA 1 cut(s) 92
Tru9I TTAA 1 cut(s) 92
TscAI CASTG 3 cut(s) 325, 418, 481
TseFI GTSAC 1 cut(s) 766
TseI GCWGC 5 cut(s) 580, 789, 811, 844, 932
Tsp45I GTSAC 1 cut(s) 766
TspDTI ATGAA 4 cut(s) 132, 916, 952, 1193
TspRI CASTG 3 cut(s) 325, 418, 481
Tth111I GACNNNGTC 1 cut(s) 1153
VneI GTGCAC 1 cut(s) 1045
VpaK11BI GGWCC 3 cut(s) 1022, 1171, 1212
XapI RAATTY 1 cut(s) 480
XceI RCATGY 1 cut(s) 1011
XcmI CCANNNNNNNNNTGG 2 cut(s) 157, 1198
XmiI GTMKAC 2 cut(s) 313, 1157
XmnI GAANNNNTTC 1 cut(s) 525
XspI CTAG 3 cut(s) 123, 428, 785
Zsp2I ATGCAT 1 cut(s) 1102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.