Prupe.7G001400_v2.0.a1
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0011692
Physical Location & Seq
Forward (+)
206425 .. 208570
2146 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G001400.1

Sequence Viewer

Length: 1380 bp
ATGGAACAAAACATGGTGGTGAACAGAGGAGCAGAAGATCAGCTCATCGAGTTGCCTCCTGGTTTTCGGTTTCATCCCACGGATGAGGAAATCATAACTAGCTATCTCACGGAGAAGGTCATCGACAGCAGCTTCGTGGCTATTGCAATCGGGGAAGCTGATTTGAACAAGTGTGAGCCATGGGATTTGCCAAAGAAAGCCAAGATGGGAGAGAAGGAGTGGTACTTCTTCTGCCAGAGAGACCGCAAGTATCCAACGGGGATGAGAACGAATCGGGCCACGGAATCTGGGTACTGGAAGGCCACAGGGAAAGATAAAGAGATCTTCAATAATAAAGGGAAAGCTGGTTGTCTTGTGGGGATGAAGAAGACTCTTGTGTTCTACAGAGGGAGAGCCCCAAAAGGAGAGAAGACCAACTGGGTCATGCATGAATACAGACTTGAAGGCAAAATCTCACAATACACCAATCTTTCAAAGGCTGCAAAGGATGAATGGGTTGTGTGCAGGGTTTTCCACAAGAACATGGGGCTTAAAAAGATCAATAATACACCAACCAGGATGAATTCTTTTGGGGATCATGATCTCTTGGATTATTCCTCCCTCCCACCTCTTATGGATCCTACTAGTTTCAATGACAACCTCATGAACAACAACGACAACAAGGCTTGTGGCTATGGAGATCATGACGTAAAGCCCGGCGCCAATCTGGCTAGTACTGCACCATCTCTATCATCAGCTAAAGCGTCATCATCAGATGATCATCATGCAATTAATAACAATAATTACCTCAGTTACTTTTCGATTGGCGGCTCTGGGGGTCAAGTCCAGAAGCCAAATTACAGCTTTCAGGTGCAGCCTACCAACAGTTATTACCAAGCTACTAGTCTCAGTAATAACCCCAATATGTTATACCCTCATCACCATCAGTTTCAAAATCCAAATCCAAATCCAAATCCTTCGAGTTTCTGGTTTCAGCCAAATCCCAATAATTCTGATTATTTTCAACAAGGCATGATCAGAGTTACTAATAATACTACTAGTGATCATGACGAAGATGATCAGGCCATGCTAAGAGCAATAGCTGCAGCCAACAACAGCAATATGAATAATGAAACATCTTCATCAGCTGCTGCAGGCTTTGGATCATCAGGTGGCTTAGCGAGGCAGTGCAAAGTGGAGCAGTTTTCATCAGCACCAGAGTCCATGTTTAGCCTTTCCCAAGACACCGGTGTCAGCACGGACATCAACACCACCGAGATATCGTCATCTCTTGTTTCATCAAAGCAAGAATTGGGAAGCGCCGCCGACAATTGTTCATCGTATGATCAACGTCCATCAGTCGTCCCCATTTCGGACATTGAAGGCTTGTGGGACTTCTGA

Protein Analysis

460

Amino Acids

51.03

Weight (kDa)

5.7

Isoelectric Point (pI)

30.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011692)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04060 AT5G18270 AT5G18270
fragaria_vesca FvH4_1g27900
malus_domestica MD12G1001200.v1.1 MD14G1001200.v1.1
prunus_persica Prupe.7G001400_v2.0.a1
pyrus_communis pycom12g00110 pycom49g00070
rosa_chinensis RchiOBHm_Chr3g0497471
rosa_laevigata RLG00000022457
rosa_multiflora Rmu_sc0008086.1_g000018
rosa_roxburghii Rroxscaffold_6G00387990
rosa_rugosa Rorug03G0293100
rosa_samantha Rh3AG336800 Rh3BG375100 Rh3CG371100 Rh3DG371800
rosa_wichuraiana Rw3G029600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1229
AccB1I GGYRCC 1 cut(s) 698
AciI CCGC 3 cut(s) 244, 807, 1302
AclWI GGATC 4 cut(s) 582, 611, 624, 1150
AcsI RAATTY 1 cut(s) 562
AcyI GRCGYC 1 cut(s) 699
AfaI GTAC 3 cut(s) 224, 293, 715
AfiI CCNNNNNNNGG 1 cut(s) 1351
AgeI ACCGGT 1 cut(s) 1226
AgsI TTSAA 8 cut(s) 166, 328, 443, 474, 631, 932, 1004, 1361
AhlI ACTAGT 3 cut(s) 623, 881, 1037
AjnI CCWGG 2 cut(s) 58, 554
Alw26I GTCTC 2 cut(s) 234, 890
AlwI GGATC 4 cut(s) 582, 611, 624, 1150
AlwNI CAGNNNCTG 1 cut(s) 1130
AoxI GGCC 3 cut(s) 276, 300, 1062
ApeKI GCWGC 7 cut(s) 129, 479, 853, 1082, 1085, 1127, 1130
ApoI RAATTY 1 cut(s) 562
ArsI GACNNNNNNTTYG 2 cut(s) 116, 148
AseI ATTAAT 1 cut(s) 771
AsiGI ACCGGT 1 cut(s) 1226
AspLEI GCGC 2 cut(s) 701, 1301
AspS9I GGNCC 1 cut(s) 276
AsuC2I CCSGG 1 cut(s) 696
AsuHPI GGTGA 2 cut(s) 31, 911
BamHI GGATCC 1 cut(s) 616
BanI GGYRCC 1 cut(s) 698
BanII GRGCYC 1 cut(s) 397
BarI GAAGNNNNNNTAC 4 cut(s) 206, 238, 821, 853
BbsI GAAGAC 2 cut(s) 374, 416
BbvI GCAGC 7 cut(s) 141, 466, 865, 1069, 1097, 1114, 1117
BccI CCATC 4 cut(s) 199, 730, 930, 1342
BciT130I CCWGG 2 cut(s) 60, 556
BciVI GTATCC 1 cut(s) 261
BclI TGATCA 5 cut(s) 757, 1014, 1042, 1057, 1324
BcnI CCSGG 1 cut(s) 696
BcoDI GTCTC 2 cut(s) 234, 890
BcuI ACTAGT 3 cut(s) 623, 881, 1037
BfaI CTAG 5 cut(s) 99, 624, 711, 882, 1038
BfmI CTRYAG 3 cut(s) 382, 1083, 1131
BfoI RGCGCY 2 cut(s) 702, 1302
BfuI GTATCC 1 cut(s) 261
BglI GCCNNNNNGGC 1 cut(s) 707
BglII AGATCT 1 cut(s) 321
BisI GCNGC 9 cut(s) 130, 480, 808, 854, 1083, 1086, 1128, 1131, 1302
BlpI GCTNAGC 1 cut(s) 1156
BlsI GCNGC 9 cut(s) 131, 481, 809, 855, 1084, 1087, 1129, 1132, 1303
BmcAI AGTACT 1 cut(s) 715
Bme1390I CCNGG 3 cut(s) 60, 556, 696
BmgT120I GGNCC 1 cut(s) 276
BmiI GGNNCC 2 cut(s) 618, 700
BmrFI CCNGG 3 cut(s) 60, 556, 696
BmrI ACTGGG 1 cut(s) 427
BmuI ACTGGG 1 cut(s) 427
BpiI GAAGAC 2 cut(s) 374, 416
Bpu1102I GCTNAGC 1 cut(s) 1156
BpuMI CCSGG 1 cut(s) 696
BsaBI GATNNNNATC 2 cut(s) 579, 759
BsaHI GRCGYC 1 cut(s) 699
BsaI GGTCTC 1 cut(s) 234
BsaJI CCNNGG 3 cut(s) 78, 179, 279
BsaWI WCCGGW 1 cut(s) 1226
Bsc4I CCNNNNNNNGG 1 cut(s) 1351
Bse118I RCCGGY 1 cut(s) 1226
Bse1I ACTGG 2 cut(s) 299, 422
Bse8I GATNNNNATC 2 cut(s) 579, 759
BseBI CCWGG 2 cut(s) 60, 556
BseDI CCNNGG 3 cut(s) 78, 179, 279
BseGI GGATG 6 cut(s) 73, 88, 267, 366, 493, 564
BseJI GATNNNNATC 2 cut(s) 579, 759
BseLI CCNNNNNNNGG 1 cut(s) 1351
BseMII CTCAG 2 cut(s) 802, 901
BseNI ACTGG 2 cut(s) 299, 422
BseRI GAGGAG 1 cut(s) 42
BseXI GCAGC 7 cut(s) 141, 466, 865, 1069, 1097, 1114, 1117
BsgI GTGCAG 3 cut(s) 523, 702, 872
BshFI GGCC 3 cut(s) 278, 302, 1064
BshNI GGYRCC 1 cut(s) 698
BshTI ACCGGT 1 cut(s) 1226
BsiSI CCGG 2 cut(s) 696, 1227
BslFI GGGAC 1 cut(s) 1328
BslI CCNNNNNNNGG 1 cut(s) 1351
BsmAI GTCTC 2 cut(s) 234, 890
BsmFI GGGAC 1 cut(s) 1328
BsnI GGCC 3 cut(s) 278, 302, 1064
Bso31I GGTCTC 1 cut(s) 234
Bsp1286I GDGCHC 1 cut(s) 397
Bsp1720I GCTNAGC 1 cut(s) 1156
Bsp19I CCATGG 1 cut(s) 179
BspACI CCGC 3 cut(s) 244, 807, 1302
BspANI GGCC 3 cut(s) 278, 302, 1064
BspCNI CTCAG 2 cut(s) 801, 900
BspHI TCATGA 4 cut(s) 577, 642, 682, 1045
BspLI GGNNCC 2 cut(s) 618, 700
BspMAI CTGCAG 2 cut(s) 1087, 1135
BspPI GGATC 4 cut(s) 582, 611, 624, 1150
BspT107I GGYRCC 1 cut(s) 698
BspTNI GGTCTC 1 cut(s) 234
BsrFI RCCGGY 1 cut(s) 1226
BsrI ACTGG 2 cut(s) 299, 422
BssAI RCCGGY 1 cut(s) 1226
BssECI CCNNGG 3 cut(s) 78, 179, 279
BssNI GRCGYC 1 cut(s) 699
BssT1I CCWWGG 1 cut(s) 179
Bst2UI CCWGG 2 cut(s) 60, 556
Bst4CI ACNGT 1 cut(s) 866
BstACI GRCGYC 1 cut(s) 699
BstAPI GCANNNNNTGC 1 cut(s) 1082
BstC8I GCNNGC 1 cut(s) 1135
BstDEI CTNAG 4 cut(s) 788, 887, 1070, 1156
BstDSI CCRYGG 3 cut(s) 78, 179, 279
BstF5I GGATG 6 cut(s) 73, 88, 267, 366, 493, 564
BstH2I RGCGCY 2 cut(s) 702, 1302
BstHHI GCGC 2 cut(s) 701, 1301
BstMAI GTCTC 2 cut(s) 234, 890
BstMWI GCNNNNNNNGC 3 cut(s) 707, 716, 1082
BstNI CCWGG 2 cut(s) 60, 556
BstSCI CCNGG 3 cut(s) 58, 554, 694
BstSFI CTRYAG 3 cut(s) 382, 1083, 1131
BstV1I GCAGC 7 cut(s) 141, 466, 865, 1069, 1097, 1114, 1117
BstV2I GAAGAC 2 cut(s) 374, 416
BstX2I RGATCY 2 cut(s) 321, 616
BstYI RGATCY 2 cut(s) 321, 616
BsuI GTATCC 1 cut(s) 261
BsuRI GGCC 3 cut(s) 278, 302, 1064
BtgI CCRYGG 3 cut(s) 78, 179, 279
BtsCI GGATG 6 cut(s) 73, 88, 267, 366, 493, 564
BtsI GCAGTG 1 cut(s) 1172
BtsIMutI CAGTG 1 cut(s) 1172
Cac8I GCNNGC 1 cut(s) 1135
CaiI CAGNNNCTG 1 cut(s) 1130
CciI TCATGA 4 cut(s) 577, 642, 682, 1045
CfoI GCGC 2 cut(s) 701, 1301
Cfr10I RCCGGY 1 cut(s) 1226
Cfr13I GGNCC 1 cut(s) 276
CseI GACGC 1 cut(s) 732
Csp6I GTAC 3 cut(s) 223, 292, 714
CspAI ACCGGT 1 cut(s) 1226
CspCI CAANNNNNGTGG 2 cut(s) 649, 684
CviQI GTAC 3 cut(s) 223, 292, 714
DdeI CTNAG 4 cut(s) 788, 887, 1070, 1156
DinI GGCGCC 1 cut(s) 700
DrdI GACNNNNNNGTC 1 cut(s) 1229
DseDI GACNNNNNNGTC 1 cut(s) 1229
Eco130I CCWWGG 1 cut(s) 179
Eco24I GRGCYC 1 cut(s) 397
Eco31I GGTCTC 1 cut(s) 234
Eco32I GATATC 1 cut(s) 1260
EcoRI GAATTC 1 cut(s) 562
EcoRII CCWGG 2 cut(s) 58, 554
EcoRV GATATC 1 cut(s) 1260
EcoT14I CCWWGG 1 cut(s) 179
EcoT22I ATGCAT 1 cut(s) 429
EcoT38I GRGCYC 1 cut(s) 397
EgeI GGCGCC 1 cut(s) 700
EheI GGCGCC 1 cut(s) 700
ErhI CCWWGG 1 cut(s) 179
FaqI GGGAC 1 cut(s) 1328
FbaI TGATCA 5 cut(s) 757, 1014, 1042, 1057, 1324
Fnu4HI GCNGC 9 cut(s) 130, 480, 808, 854, 1083, 1086, 1128, 1131, 1302
FokI GGATG 6 cut(s) 60, 95, 274, 373, 500, 571
FriOI GRGCYC 1 cut(s) 397
Fsp4HI GCNGC 9 cut(s) 130, 480, 808, 854, 1083, 1086, 1128, 1131, 1302
FspBI CTAG 5 cut(s) 99, 624, 711, 882, 1038
GlaI GCGC 2 cut(s) 700, 1300
GluI GCNGC 9 cut(s) 130, 480, 808, 854, 1083, 1086, 1128, 1131, 1302
HaeII RGCGCY 2 cut(s) 702, 1302
HaeIII GGCC 3 cut(s) 278, 302, 1064
HapII CCGG 2 cut(s) 696, 1227
HgaI GACGC 1 cut(s) 732
HhaI GCGC 2 cut(s) 701, 1301
Hin1I GRCGYC 1 cut(s) 699
Hin6I GCGC 2 cut(s) 699, 1299
HinP1I GCGC 2 cut(s) 699, 1299
HinfI GANTC 4 cut(s) 271, 284, 370, 1199
HpaII CCGG 2 cut(s) 696, 1227
HphI GGTGA 2 cut(s) 31, 911
Hpy166II GTNNAC 1 cut(s) 22
Hpy188I TCNGA 5 cut(s) 754, 994, 1019, 1354, 1379
Hpy188III TCNNGA 5 cut(s) 578, 643, 683, 826, 1046
Hpy8I GTNNAC 1 cut(s) 22
HpyAV CCTTC 6 cut(s) 109, 208, 292, 437, 966, 1355
HpyCH4III ACNGT 1 cut(s) 866
HpyCH4IV ACGT 2 cut(s) 687, 1330
HpyF10VI GCNNNNNNNGC 3 cut(s) 707, 716, 1082
HpyF3I CTNAG 4 cut(s) 788, 887, 1070, 1156
HpySE526I ACGT 2 cut(s) 687, 1330
Hsp92I GRCGYC 1 cut(s) 699
HspAI GCGC 2 cut(s) 699, 1299
KasI GGCGCC 1 cut(s) 698
Ksp22I TGATCA 5 cut(s) 757, 1014, 1042, 1057, 1324
LmnI GCTCC 2 cut(s) 29, 1177
Lsp1109I GCAGC 7 cut(s) 141, 466, 865, 1069, 1097, 1114, 1117
MaeI CTAG 5 cut(s) 99, 624, 711, 882, 1038
MaeII ACGT 2 cut(s) 687, 1330
MaeIII GTNAC 2 cut(s) 791, 1021
MboII GAAGA 8 cut(s) 47, 220, 316, 376, 379, 421, 1064, 1110
MfeI CAATTG 1 cut(s) 1309
MflI RGATCY 2 cut(s) 321, 616
MhlI GDGCHC 1 cut(s) 397
MluCI AATT 7 cut(s) 562, 768, 781, 835, 988, 1289, 1309
Mly113I GGCGCC 1 cut(s) 699
MlyI GAGTC 2 cut(s) 364, 1208
MmeI TCCRAC 1 cut(s) 278
Mph1103I ATGCAT 1 cut(s) 429
MseI TTAA 2 cut(s) 531, 771
MslI CAYNNNNRTG 1 cut(s) 17
MspA1I CMGCKG 1 cut(s) 1127
MspI CCGG 2 cut(s) 696, 1227
MspR9I CCNGG 3 cut(s) 60, 556, 696
MunI CAATTG 1 cut(s) 1309
MvaI CCWGG 2 cut(s) 60, 556
MwoI GCNNNNNNNGC 3 cut(s) 707, 716, 1082
NarI GGCGCC 1 cut(s) 699
NciI CCSGG 1 cut(s) 696
NcoI CCATGG 1 cut(s) 179
NlaIV GGNNCC 2 cut(s) 618, 700
NsiI ATGCAT 1 cut(s) 429
PagI TCATGA 4 cut(s) 577, 642, 682, 1045
PfeI GAWTC 2 cut(s) 271, 284
PinAI ACCGGT 1 cut(s) 1226
PkrI GCNGC 9 cut(s) 131, 481, 809, 855, 1084, 1087, 1129, 1132, 1303
PleI GAGTC 2 cut(s) 364, 1207
PluTI GGCGCC 1 cut(s) 702
PpsI GAGTC 2 cut(s) 364, 1207
PshBI ATTAAT 1 cut(s) 771
Psp6I CCWGG 2 cut(s) 58, 554
PspGI CCWGG 2 cut(s) 58, 554
PspN4I GGNNCC 2 cut(s) 618, 700
PspPI GGNCC 1 cut(s) 276
PstI CTGCAG 2 cut(s) 1087, 1135
PstNI CAGNNNCTG 1 cut(s) 1130
PsuI RGATCY 2 cut(s) 321, 616
PvuII CAGCTG 1 cut(s) 1127
RsaI GTAC 3 cut(s) 224, 293, 715
RsaNI GTAC 3 cut(s) 223, 292, 714
RseI CAYNNNNRTG 1 cut(s) 17
SaqAI TTAA 2 cut(s) 531, 771
SatI GCNGC 9 cut(s) 130, 480, 808, 854, 1083, 1086, 1128, 1131, 1302
Sau96I GGNCC 1 cut(s) 276
ScaI AGTACT 1 cut(s) 715
SchI GAGTC 2 cut(s) 364, 1208
ScrFI CCNGG 3 cut(s) 60, 556, 696
SduI GDGCHC 1 cut(s) 397
SfcI CTRYAG 3 cut(s) 382, 1083, 1131
SfoI GGCGCC 1 cut(s) 700
SgrAI CRCCGGYG 1 cut(s) 1226
SmiMI CAYNNNNRTG 1 cut(s) 17
SpeI ACTAGT 3 cut(s) 623, 881, 1037
Sse9I AATT 7 cut(s) 562, 768, 781, 835, 988, 1289, 1309
SsiI CCGC 3 cut(s) 244, 807, 1302
SspDI GGCGCC 1 cut(s) 698
SspMI CTAG 5 cut(s) 99, 624, 711, 882, 1038
StyD4I CCNGG 3 cut(s) 58, 554, 694
StyI CCWWGG 1 cut(s) 179
TaaI ACNGT 1 cut(s) 866
TaiI ACGT 2 cut(s) 690, 1333
TaqI TCGA 4 cut(s) 48, 123, 800, 959
TasI AATT 7 cut(s) 562, 768, 781, 835, 988, 1289, 1309
TatI WGTACW 1 cut(s) 713
TauI GCSGC 2 cut(s) 810, 1304
TfiI GAWTC 2 cut(s) 271, 284
Tru1I TTAA 2 cut(s) 531, 771
Tru9I TTAA 2 cut(s) 531, 771
TscAI CASTG 1 cut(s) 1172
TseI GCWGC 7 cut(s) 129, 479, 853, 1082, 1085, 1127, 1130
TspGWI ACGGA 4 cut(s) 95, 125, 296, 1253
TspRI CASTG 1 cut(s) 1172
VspI ATTAAT 1 cut(s) 771
XapI RAATTY 1 cut(s) 562
XspI CTAG 5 cut(s) 99, 624, 711, 882, 1038
ZrmI AGTACT 1 cut(s) 715
Zsp2I ATGCAT 1 cut(s) 429
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.