Prupe.7G018400_v2.0.a1
MYB Family

Myb-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0009968
Physical Location & Seq
Reverse (-)
2713734 .. 2715596
1863 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G018400.1

Sequence Viewer

Length: 1089 bp
ATGCTCATAACACTATTTGAAATTAAGTGCGAGGTCATTTTGGATTGGAAGAGAAGGCAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACATGGGAAGGCCTCCTTGCTGTGAGAAGGTTGGCATCAAGAAGGGTCCATGGACCCCTGAGGAGGACATCATCCTTGTTTCTTACATCCAAGAACACGGTCCGGGCAATTGGAGATCAGTTCCCACAAACACTGGGTTGTTGAGGTGCAGCAAAAGTTGCAGGCTCAGATGGACTAACTACCTCAGACCTGGAATCAAGAGAGGGAACTTCACACCTCATGAAGAAGGGATGATCATTCATTTGCAAGCTTTACTGGGTAACAAATGGGCAGCCATAGCTTCCTACCTCCCACAGAGAACAGACAATGACATAAAGAACTACTGGAACACCCACTTGAAGAAGAAGCTGAAGAAATTTCAATCAGCTCTAGACCCTCACATGGCATCAGACTCAACCACAAGTACCAATCATCAGTTAAATATTGTATCAAGGAGGAGTTTGAGTGAAGGGAGCTTAGATAATATGGCAACTCATGCCTCCTCAGTTACTCTGAAGAACAACCAATCCTCCACATATGCCTCGAGCACCGCAAACATTTCGCGACTCCTCGAAGGTTGGATGAGATCCTCCCCAACCCCGAAGATGCTGTCTAACACTAACCACCTCAAACTCAATGCATCTCATGATCTTCAGGATCAAGAAACACCTGCTGGAAATCTACTATCTCGTCACGAAGAGTTGGAATCGATTTTGTCGTACGAGAACTTGAACAATGTTGCTTCATGGGACAGGTCCACTTGTGATTCTACTCAGTCTGATAATAAGTTGAACCCTCGATGTGGTAGGGTTGCAAATGATGACGAAATAATTCATGAAGATGATCTTGTGCCTGATCGTGATCAGAAGAACAAGCAAATTATTAGATGTGAGGGCAGTACAAGTGCTCCTCCATTATCATTTCTTGAGAAGTGGCTTTTGGATGAAAGTGCTGGACAAGTAGACGATGATCAGATGTTGGAATTGTCTCCGATGTCCTCGGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

363

Amino Acids

41.36

Weight (kDa)

6.84

Isoelectric Point (pI)

52.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 760
Acc36I ACCTGC 1 cut(s) 760
AccI GTMKAC 1 cut(s) 1044
AccII CGCG 1 cut(s) 646
AciI CCGC 1 cut(s) 633
AclWI GGATC 2 cut(s) 663, 747
AcsI RAATTY 1 cut(s) 458
AcuI CTGAAG 3 cut(s) 473, 617, 719
AfaI GTAC 3 cut(s) 508, 803, 982
AfiI CCNNNNNNNGG 3 cut(s) 166, 484, 884
AgsI TTSAA 5 cut(s) 20, 442, 464, 814, 874
AjnI CCWGG 1 cut(s) 292
AjuI GAANNNNNNNTTGG 2 cut(s) 1004, 1036
AloI GAACNNNNNNTCC 2 cut(s) 593, 625
AluBI AGCT 5 cut(s) 353, 383, 451, 470, 558
AluI AGCT 5 cut(s) 353, 383, 451, 470, 558
Alw21I GWGCWC 2 cut(s) 632, 991
Alw26I GTCTC 2 cut(s) 96, 1074
AlwI GGATC 2 cut(s) 663, 747
Ama87I CYCGRG 1 cut(s) 625
AoxI GGCC 1 cut(s) 113
ApeKI GCWGC 2 cut(s) 252, 374
ApoI RAATTY 1 cut(s) 458
ArsI GACNNNNNNTTYG 2 cut(s) 677, 709
Asp700I GAANNNNTTC 1 cut(s) 912
AspS9I GGNCC 4 cut(s) 149, 156, 203, 837
AsuC2I CCSGG 1 cut(s) 207
AvaI CYCGRG 1 cut(s) 625
AvaII GGWCC 4 cut(s) 149, 156, 203, 837
AxyI CCTNAGG 1 cut(s) 162
Bbv12I GWGCWC 2 cut(s) 632, 991
BbvI GCAGC 2 cut(s) 264, 386
BccI CCATC 1 cut(s) 267
BcgI CGANNNNNNTGC 2 cut(s) 624, 658
BciT130I CCWGG 1 cut(s) 294
BclI TGATCA 3 cut(s) 336, 943, 1051
BcnI CCSGG 1 cut(s) 207
BcoDI GTCTC 2 cut(s) 96, 1074
BfaI CTAG 1 cut(s) 473
BfuAI ACCTGC 1 cut(s) 760
BisI GCNGC 2 cut(s) 253, 375
BlsI GCNGC 2 cut(s) 254, 376
Bme1390I CCNGG 2 cut(s) 207, 294
Bme18I GGWCC 4 cut(s) 149, 156, 203, 837
BmeT110I CYCGRG 1 cut(s) 625
BmgT120I GGNCC 4 cut(s) 149, 156, 203, 837
BmiI GGNNCC 2 cut(s) 150, 158
BmrFI CCNGG 2 cut(s) 207, 294
BmrI ACTGGG 2 cut(s) 246, 368
BmsI GCATC 4 cut(s) 147, 497, 678, 731
BmuI ACTGGG 2 cut(s) 246, 368
BpuEI CTTGAG 1 cut(s) 1028
BpuMI CCSGG 1 cut(s) 207
Bsa29I ATCGAT 1 cut(s) 791
BsaBI GATNNNNATC 1 cut(s) 942
BsaJI CCNNGG 2 cut(s) 152, 1080
BsaXI ACNNNNNCTCC 6 cut(s) 532, 562, 596, 626, 973, 1003
Bsc4I CCNNNNNNNGG 3 cut(s) 166, 484, 884
Bse1I ACTGG 3 cut(s) 241, 363, 431
Bse21I CCTNAGG 1 cut(s) 162
Bse8I GATNNNNATC 1 cut(s) 942
BseBI CCWGG 1 cut(s) 294
BseCI ATCGAT 1 cut(s) 791
BseDI CCNNGG 2 cut(s) 152, 1080
BseGI GGATG 5 cut(s) 174, 189, 339, 669, 1030
BseJI GATNNNNATC 1 cut(s) 942
BseLI CCNNNNNNNGG 3 cut(s) 166, 484, 884
BseMII CTCAG 5 cut(s) 153, 283, 301, 600, 869
BseNI ACTGG 3 cut(s) 241, 363, 431
BseRI GAGGAG 5 cut(s) 179, 553, 574, 641, 981
BseXI GCAGC 2 cut(s) 264, 386
BsgI GTGCAG 1 cut(s) 271
Bsh1236I CGCG 1 cut(s) 646
BshFI GGCC 1 cut(s) 115
BshVI ATCGAT 1 cut(s) 791
BsiHKAI GWGCWC 2 cut(s) 632, 991
BsiHKCI CYCGRG 1 cut(s) 625
BsiSI CCGG 1 cut(s) 206
BsiWI CGTACG 1 cut(s) 801
BslFI GGGAC 1 cut(s) 845
BslI CCNNNNNNNGG 3 cut(s) 166, 484, 884
BsmAI GTCTC 2 cut(s) 96, 1074
BsmFI GGGAC 1 cut(s) 845
BsnI GGCC 1 cut(s) 115
BsoBI CYCGRG 1 cut(s) 625
Bsp1286I GDGCHC 2 cut(s) 632, 991
Bsp143I GATC 9 cut(s) 218, 336, 668, 730, 739, 925, 937, 943, 1051
Bsp19I CCATGG 1 cut(s) 152
Bsp68I TCGCGA 1 cut(s) 646
BspACI CCGC 1 cut(s) 633
BspANI GGCC 1 cut(s) 115
BspCNI CTCAG 5 cut(s) 154, 282, 300, 599, 868
BspDI ATCGAT 1 cut(s) 791
BspFNI CGCG 1 cut(s) 646
BspHI TCATGA 3 cut(s) 322, 727, 916
BspLI GGNNCC 2 cut(s) 150, 158
BspMI ACCTGC 1 cut(s) 760
BspPI GGATC 2 cut(s) 663, 747
BsrI ACTGG 3 cut(s) 241, 363, 431
BssECI CCNNGG 2 cut(s) 152, 1080
BssMI GATC 9 cut(s) 218, 336, 668, 730, 739, 925, 937, 943, 1051
BssT1I CCWWGG 1 cut(s) 152
Bst2UI CCWGG 1 cut(s) 294
Bst4CI ACNGT 1 cut(s) 203
Bst6I CTCTTC 3 cut(s) 44, 56, 774
BstAPI GCANNNNNTGC 2 cut(s) 261, 578
BstC8I GCNNGC 2 cut(s) 266, 351
BstDEI CTNAG 6 cut(s) 162, 269, 287, 559, 586, 855
BstDSI CCRYGG 1 cut(s) 152
BstF5I GGATG 5 cut(s) 174, 189, 339, 669, 1030
BstFNI CGCG 1 cut(s) 646
BstKTI GATC 9 cut(s) 221, 339, 671, 733, 742, 928, 940, 946, 1054
BstMAI GTCTC 2 cut(s) 96, 1074
BstMBI GATC 9 cut(s) 218, 336, 668, 730, 739, 925, 937, 943, 1051
BstMWI GCNNNNNNNGC 3 cut(s) 261, 380, 578
BstNI CCWGG 1 cut(s) 294
BstSCI CCNGG 2 cut(s) 205, 292
BstUI CGCG 1 cut(s) 646
BstV1I GCAGC 2 cut(s) 264, 386
BstX2I RGATCY 1 cut(s) 668
BstYI RGATCY 1 cut(s) 668
Bsu15I ATCGAT 1 cut(s) 791
Bsu36I CCTNAGG 1 cut(s) 162
BsuRI GGCC 1 cut(s) 115
BsuTUI ATCGAT 1 cut(s) 791
BtgI CCRYGG 1 cut(s) 152
BtsCI GGATG 5 cut(s) 174, 189, 339, 669, 1030
BtsIMutI CAGTG 1 cut(s) 234
BtuMI TCGCGA 1 cut(s) 646
BveI ACCTGC 1 cut(s) 760
Cac8I GCNNGC 2 cut(s) 266, 351
CciI TCATGA 3 cut(s) 322, 727, 916
Cfr13I GGNCC 4 cut(s) 149, 156, 203, 837
ClaI ATCGAT 1 cut(s) 791
CpoI CGGWCCG 1 cut(s) 203
Csp6I GTAC 3 cut(s) 507, 802, 981
CspI CGGWCCG 1 cut(s) 203
CviAII CATG 8 cut(s) 106, 153, 323, 484, 578, 728, 828, 917
CviJI RGCY 9 cut(s) 115, 268, 353, 377, 383, 451, 470, 558, 1018
CviKI_1 RGCY 9 cut(s) 115, 268, 353, 377, 383, 451, 470, 558, 1018
CviQI GTAC 3 cut(s) 507, 802, 981
DdeI CTNAG 6 cut(s) 162, 269, 287, 559, 586, 855
DpnI GATC 9 cut(s) 220, 338, 670, 732, 741, 927, 939, 945, 1053
DpnII GATC 9 cut(s) 218, 336, 668, 730, 739, 925, 937, 943, 1051
Eam1104I CTCTTC 3 cut(s) 44, 56, 774
EarI CTCTTC 3 cut(s) 44, 56, 774
Eco130I CCWWGG 1 cut(s) 152
Eco147I AGGCCT 1 cut(s) 115
Eco47I GGWCC 4 cut(s) 149, 156, 203, 837
Eco57I CTGAAG 3 cut(s) 473, 617, 719
Eco81I CCTNAGG 1 cut(s) 162
Eco88I CYCGRG 1 cut(s) 625
EcoRII CCWGG 1 cut(s) 292
EcoT14I CCWWGG 1 cut(s) 152
EcoT22I ATGCAT 1 cut(s) 724
ErhI CCWWGG 1 cut(s) 152
FaeI CATG 8 cut(s) 109, 156, 326, 487, 581, 731, 831, 920
FalI AAGNNNNNCTT 4 cut(s) 103, 135, 912, 944
FaqI GGGAC 1 cut(s) 845
FatI CATG 8 cut(s) 105, 152, 322, 483, 577, 727, 827, 916
FauNDI CATATG 1 cut(s) 619
FbaI TGATCA 3 cut(s) 336, 943, 1051
FblI GTMKAC 1 cut(s) 1044
Fnu4HI GCNGC 2 cut(s) 253, 375
FokI GGATG 5 cut(s) 161, 176, 346, 676, 1037
Fsp4HI GCNGC 2 cut(s) 253, 375
FspBI CTAG 1 cut(s) 473
GluI GCNGC 2 cut(s) 253, 375
HaeIII GGCC 1 cut(s) 115
HapII CCGG 1 cut(s) 206
Hin1II CATG 8 cut(s) 109, 156, 326, 487, 581, 731, 831, 920
HindIII AAGCTT 1 cut(s) 351
HinfI GANTC 5 cut(s) 297, 494, 648, 788, 848
HpaII CCGG 1 cut(s) 206
Hpy166II GTNNAC 2 cut(s) 840, 1045
Hpy188I TCNGA 8 cut(s) 272, 290, 493, 597, 862, 948, 1056, 1074
Hpy8I GTNNAC 2 cut(s) 840, 1045
HpyAV CCTTC 7 cut(s) 48, 105, 124, 139, 323, 545, 650
HpyCH4III ACNGT 1 cut(s) 203
HpyCH4V TGCA 5 cut(s) 252, 264, 349, 722, 896
HpyF10VI GCNNNNNNNGC 3 cut(s) 261, 380, 578
HpyF3I CTNAG 6 cut(s) 162, 269, 287, 559, 586, 855
Hsp92II CATG 8 cut(s) 109, 156, 326, 487, 581, 731, 831, 920
Ksp22I TGATCA 3 cut(s) 336, 943, 1051
Kzo9I GATC 9 cut(s) 218, 336, 668, 730, 739, 925, 937, 943, 1051
LmnI GCTCC 2 cut(s) 555, 994
Lsp1109I GCAGC 2 cut(s) 264, 386
LweI GCATC 4 cut(s) 147, 497, 678, 731
MaeI CTAG 1 cut(s) 473
MaeIII GTNAC 3 cut(s) 362, 589, 773
MalI GATC 9 cut(s) 220, 338, 670, 732, 741, 927, 939, 945, 1053
MboI GATC 9 cut(s) 218, 336, 668, 730, 739, 925, 937, 943, 1051
MfeI CAATTG 1 cut(s) 211
MflI RGATCY 1 cut(s) 668
MhlI GDGCHC 2 cut(s) 632, 991
MluCI AATT 6 cut(s) 21, 211, 458, 912, 960, 1064
MlyI GAGTC 2 cut(s) 488, 642
MmeI TCCRAC 3 cut(s) 641, 765, 1041
Mph1103I ATGCAT 1 cut(s) 724
MroXI GAANNNNTTC 1 cut(s) 912
MseI TTAA 2 cut(s) 24, 521
MslI CAYNNNNRTG 1 cut(s) 921
MspI CCGG 1 cut(s) 206
MspR9I CCNGG 2 cut(s) 207, 294
MunI CAATTG 1 cut(s) 211
MvaI CCWGG 1 cut(s) 294
MvnI CGCG 1 cut(s) 646
MwoI GCNNNNNNNGC 3 cut(s) 261, 380, 578
NciI CCSGG 1 cut(s) 207
NcoI CCATGG 1 cut(s) 152
NdeI CATATG 1 cut(s) 619
NdeII GATC 9 cut(s) 218, 336, 668, 730, 739, 925, 937, 943, 1051
NlaIII CATG 8 cut(s) 109, 156, 326, 487, 581, 731, 831, 920
NlaIV GGNNCC 2 cut(s) 150, 158
NmuCI GTSAC 1 cut(s) 773
NruI TCGCGA 1 cut(s) 646
NsiI ATGCAT 1 cut(s) 724
PaeR7I CTCGAG 1 cut(s) 625
PagI TCATGA 3 cut(s) 322, 727, 916
PaqCI CACCTGC 1 cut(s) 760
PceI AGGCCT 1 cut(s) 115
PcsI WCGNNNNNNNCGW 1 cut(s) 797
PdmI GAANNNNTTC 1 cut(s) 912
PfeI GAWTC 3 cut(s) 297, 788, 848
Pfl23II CGTACG 1 cut(s) 801
PkrI GCNGC 2 cut(s) 254, 376
PleI GAGTC 2 cut(s) 488, 642
PpsI GAGTC 2 cut(s) 488, 642
Psp6I CCWGG 1 cut(s) 292
PspGI CCWGG 1 cut(s) 292
PspLI CGTACG 1 cut(s) 801
PspN4I GGNNCC 2 cut(s) 150, 158
PspPI GGNCC 4 cut(s) 149, 156, 203, 837
PspXI VCTCGAGB 1 cut(s) 625
PsuI RGATCY 1 cut(s) 668
RruI TCGCGA 1 cut(s) 646
RsaI GTAC 3 cut(s) 508, 803, 982
RsaNI GTAC 3 cut(s) 507, 802, 981
RseI CAYNNNNRTG 1 cut(s) 921
Rsr2I CGGWCCG 1 cut(s) 203
RsrII CGGWCCG 1 cut(s) 203
SaqAI TTAA 2 cut(s) 24, 521
SatI GCNGC 2 cut(s) 253, 375
Sau3AI GATC 9 cut(s) 218, 336, 668, 730, 739, 925, 937, 943, 1051
Sau96I GGNCC 4 cut(s) 149, 156, 203, 837
SchI GAGTC 2 cut(s) 488, 642
ScrFI CCNGG 2 cut(s) 207, 294
SduI GDGCHC 2 cut(s) 632, 991
SfaNI GCATC 4 cut(s) 147, 497, 678, 731
Sfr274I CTCGAG 1 cut(s) 625
SinI GGWCC 4 cut(s) 149, 156, 203, 837
SlaI CTCGAG 1 cut(s) 625
SmiMI CAYNNNNRTG 1 cut(s) 921
SmlI CTYRAG 2 cut(s) 625, 1007
SmoI CTYRAG 2 cut(s) 625, 1007
Sse9I AATT 6 cut(s) 21, 211, 458, 912, 960, 1064
SseBI AGGCCT 1 cut(s) 115
SsiI CCGC 1 cut(s) 633
SspI AATATT 1 cut(s) 526
SspMI CTAG 1 cut(s) 473
StuI AGGCCT 1 cut(s) 115
StyD4I CCNGG 2 cut(s) 205, 292
StyI CCWWGG 1 cut(s) 152
TaaI ACNGT 1 cut(s) 203
TaqI TCGA 4 cut(s) 626, 654, 791, 880
TasI AATT 6 cut(s) 21, 211, 458, 912, 960, 1064
TatI WGTACW 1 cut(s) 980
TfiI GAWTC 3 cut(s) 297, 788, 848
Tru1I TTAA 2 cut(s) 24, 521
Tru9I TTAA 2 cut(s) 24, 521
TscAI CASTG 1 cut(s) 241
TseFI GTSAC 1 cut(s) 773
TseI GCWGC 2 cut(s) 252, 374
Tsp45I GTSAC 1 cut(s) 773
TspDTI ATGAA 6 cut(s) 332, 339, 816, 905, 933, 1041
TspRI CASTG 1 cut(s) 241
VpaK11BI GGWCC 4 cut(s) 149, 156, 203, 837
XapI RAATTY 1 cut(s) 458
XbaI TCTAGA 1 cut(s) 472
XhoI CTCGAG 1 cut(s) 625
XmiI GTMKAC 1 cut(s) 1044
XmnI GAANNNNTTC 1 cut(s) 912
XspI CTAG 1 cut(s) 473
Zsp2I ATGCAT 1 cut(s) 724
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.