Rorug03G0275800
MYB Family

Myb-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0009968
Physical Location & Seq
Forward (+)
27290045 .. 27294768
4724 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0275800.1

Sequence Viewer

Length: 2394 bp
ATGTTCAAATCATGTTTGGTTGATTCGGCTTTTCTCCGAAACTGTGCGTTTTTTGTCAATAGGGTGAGTTTTAGAGTGTATTCTGCTGCTGCTTCTGCATTGTTACTGGAGGATCATGTGTTTGTGAAAGCTCCATTACCCTTTGAGGCCTTTGCAGTTCAGGAAATTAAAGCTCTGGGGAAAAGGTTTTGTACTCAGAGAAAGGAAAATTTGTATCCCTTTGTTGTCAGATTGTTTAAAACTTTGAATTGGGAGGTCGCATGGGATGCAAGGTTCTCTAAGTCTGTGAAAGAGCATGGCTTTTCTCATTCTTTAAATGCCTTTAGAATTATTGTTCATGAATTTGCATTGGTGGGAATGCAAATGGAAGTGCAAGCTTTGCTTAGAGATGTTGTATGCTATTATCAAGAAGCTAAGTATGATGCATTTGGGCTGTTCCCATATTTATTGGATTCACCTCACAGTGGGGTGAGATCGCTTGTTGTATTTGATGCACTAATAACGGCTTTTGCTGACAACTCGATGCCTGAGAATGCTGTGGATGTGTTTTTGAAGATTAAAAGAATGGGTCTTGAGCCACACATTTGGTCTTGTAATATCTTGCTCAAGTGTTTGGCAGAAGCAAACAAACTGGAATGTGTTAGAAGCTTATTCGAATGTTTGAAAAACTCTGGGCCATCTCCTAATGTTTACACTTACACAGTTATGGTGAGCTTTTTCTGTACAGGATATCCACTGCAGGATGTGGATATCAGTCAAGCCACTGACATTCTTCAAGAAATGGAGAAGAGTGGGAAACACCCAACTGCAGTGATATATGCTGAATATATTCATGGACTCTGTAAAGCTGGATATGTTGAGTTTGCTTTGGACTTCATCCGAAACATGCAACACAGAGACCAACCTCTCAATAGTTATTGTTATAATGCTATACTTCGTGGGTTTTGCCAAAAAGGCGAAACTTGTCAAGCTCTAAAATTGTTGGAGGAAATGAAGAGCTACGGGATGGTGCCAGATGTTTATTGCTACACCATATTGATAGATGGATTTTGCAAGGAAGGGGATATAGAGAAAGCTCTTGCTTTGTTTGAGGAAATGGAGCTTTGTAAAATAAAACCTTCTTTGGTTAGCTATAGCTCACTTATATATGGTCTTTGCAAACTTGGATTGATAGATCATATGTTAGATATATATCGTAATCTGGAGTCTGCCGGTGTGTGCCCTGATGCTATCACTTGCACTCTCATTGTTGATGGGTATTGCAGGGAAGGGCGCTTGGAGGAAGCCTTGAGATTTATTTACGAGATGTATCATCAAGGCATAAGCCCTAACTCGTATACTTATAATGCAGTCCTCAACAGTTTGTGCAAGCAAGGAAAGCCAGAAAAAGCATGGGAACTAATCCCTCAAATGCTTAAAAGGAATATACTCCCAGAAGTTGCAAATTATAATACTCTTATAAATGGCTTTGGAAAACAGTTGAATTCAAAGAAGGCCTGCATGGTGTATGGAGGAATGCTCAAAGCTGGTGTCATGCCCAATACAGTCACATATACAATCCTCATCAATATACTCTGCCATAGAGGCAAACTATATGAAGCTTGTAACATGTTCAAGGAAATGAGTGAAAGGGGTTTGGCTGCAGATGTGATTTCTTATACATCTCTAATTGCTGGGTTTTGTAGGATGGGAGACATGAAGAAGGCTTGGGTACTGTTCAAAGAAATGTTGAGCAAAAACCATTTGCCCAATGCTATCACGTATACGTGTTTAATAGATGGTTTTTGCAAGTCTTCTCGCATGGATTATGCCAGTTTCTTGTTTGAGGAAATGAAGAATAAAAATGTTACTCCTGATCTGGTGACTTACACTGTTCTCATCATTGGGTACTGTAGGCTCCGGAATATTGATAGAGCAATTCAGTTATTTGATGAAATGAAGCACAGTGGTATCTCAGGGGATGGTTTTGCCAATGAAGCTTTGGGGCTTTACACCAAAGACTGGTGTGTTTCCGAACACAGACTTCTTAAATCATCACTGAGACAAATCAAAGTGCTATTGCTGAGGCATGTGAATATTCGCTTACAGAGATCTATGGACTGGTGGAGGTACACATTGAATTTTGGAAGATGTGGAAGTTATTTCATGTTTTACTTGGTGCTGACCCCTGTAACTCCTAAAATACTAGCTTCATGTGCAGTTGCAGACTTGTGCAAGGGTTTAATTTTAAGAAACCAGTCGGAGAATGCTCAGTCATGCATAAGTAATCTTGTTAAGGCCAGGGTTCCAAAGATCAATCCTTGTAATCTCGAAGTCCCATTTCTTGCTTTATCAGGGCCAGCAATTGTTGTGCGTGAAGGTTGTTTCCGCTACCCATATGGATGCAGAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

797

Amino Acids

90.61

Weight (kDa)

8.43

Isoelectric Point (pI)

37.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 194 - 241 4e-08 PPR repeat family
PPR_2 PF13041 268 - 317 6.3e-09 PPR repeat family
PPR_long PF17177 286 - 409 2.9e-08 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 303 - 332 1.7e-06 PPR repeat
PPR_2 PF13041 304 - 352 7.3e-17 PPR repeat family
MRP-S27 PF10037 309 - 366 3.8e-06 Mitochondrial 28S ribosomal protein S27
PPR_3 PF13812 326 - 382 2.5e-10 Pentatricopeptide repeat domain
PPR_1 PF12854 335 - 367 3e-14 PPR repeat
PPR_2 PF13041 338 - 387 1.1e-16 PPR repeat family
PPR PF01535 342 - 369 1.3e-08 PPR repeat
PPR_2 PF13041 376 - 422 5.2e-08 PPR repeat family
TPR_24 PF23276 396 - 504 2.3e-08 Fungal tetratrico peptide repeats
PPR_3 PF13812 397 - 454 9.5e-08 Pentatricopeptide repeat domain
PPR_1 PF12854 405 - 436 6.5e-08 PPR repeat
PPR_2 PF13041 408 - 457 2.2e-15 PPR repeat family
PPR_long PF17177 426 - 529 7.1e-08 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 440 - 471 5.3e-08 PPR repeat
PPR PF01535 446 - 476 2e-06 PPR repeat
PPR_2 PF13041 447 - 478 2.7e-08 PPR repeat family
PPR_3 PF13812 470 - 525 1.3e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 478 - 527 1.6e-13 PPR repeat family
PPR_1 PF12854 510 - 542 4.4e-10 PPR repeat
PPR_2 PF13041 513 - 562 1.1e-15 PPR repeat family
PPR PF01535 516 - 546 1.8e-07 PPR repeat
TPR_24 PF23276 534 - 645 3.3e-07 Fungal tetratrico peptide repeats
PPR_3 PF13812 537 - 593 1.1e-07 Pentatricopeptide repeat domain
PPR_1 PF12854 544 - 576 2.2e-10 PPR repeat
PPR_2 PF13041 549 - 597 6e-19 PPR repeat family
PPR PF01535 551 - 580 3.9e-08 PPR repeat
PPR_long PF17177 568 - 652 7e-09 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 579 - 612 2.5e-10 PPR repeat
PPR PF01535 586 - 616 6.8e-07 PPR repeat
PPR_2 PF13041 586 - 632 2.7e-15 PPR repeat family
PPR_3 PF13812 607 - 652 2.2e-08 Pentatricopeptide repeat domain
PPR_1 PF12854 614 - 647 5.2e-11 PPR repeat
PPR_2 PF13041 621 - 654 7.9e-08 PPR repeat family
PPR PF01535 621 - 651 1.2e-08 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 924, 1344, 1449, 1460
AccB1I GGYRCC 1 cut(s) 1009
AccB7I CCANNNNNTGG 1 cut(s) 2001
AccI GTMKAC 2 cut(s) 1337, 1763
AccIII TCCGGA 1 cut(s) 1899
AciI CCGC 1 cut(s) 2368
AclWI GGATC 1 cut(s) 120
AcsI RAATTY 4 cut(s) 208, 341, 1483, 2119
AfaI GTAC 5 cut(s) 193, 724, 1713, 1889, 2111
AfiI CCNNNNNNNGG 2 cut(s) 464, 2001
AflIII ACRYGT 2 cut(s) 1608, 1766
AjnI CCWGG 1 cut(s) 2279
AloI GAACNNNNNNTCC 2 cut(s) 257, 289
Alw26I GTCTC 3 cut(s) 891, 1686, 2035
AlwI GGATC 1 cut(s) 120
Aor13HI TCCGGA 1 cut(s) 1899
AoxI GGCC 5 cut(s) 147, 674, 1494, 2277, 2336
ApeKI GCWGC 3 cut(s) 86, 89, 1640
ApoI RAATTY 4 cut(s) 208, 341, 1483, 2119
ArsI GACNNNNNNTTYG 2 cut(s) 1515, 1547
Asp700I GAANNNNTTC 1 cut(s) 828
AspLEI GCGC 1 cut(s) 1275
AspS9I GGNCC 2 cut(s) 674, 2336
AsuHPI GGTGA 5 cut(s) 76, 447, 481, 721, 1873
AsuII TTCGAA 1 cut(s) 654
BaeGI GKGCMC 1 cut(s) 1223
BaeI ACNNNNGTAYC 2 cut(s) 1933, 1966
BanI GGYRCC 1 cut(s) 1009
BbsI GAAGAC 1 cut(s) 1785
BbvCI CCTCAGC 1 cut(s) 2063
BbvI GCAGC 3 cut(s) 73, 76, 1627
BccI CCATC 7 cut(s) 685, 1000, 1037, 1247, 1681, 1772, 1955
BceAI ACGGC 1 cut(s) 519
BciT130I CCWGG 1 cut(s) 2281
BciVI GTATCC 1 cut(s) 225
BcoDI GTCTC 3 cut(s) 891, 1686, 2035
BfaI CTAG 1 cut(s) 2186
BfmI CTRYAG 5 cut(s) 737, 807, 1132, 1641, 1891
BfoI RGCGCY 1 cut(s) 1276
BfuI GTATCC 1 cut(s) 225
BglI GCCNNNNNGGC 2 cut(s) 954, 1584
BglII AGATCT 1 cut(s) 2090
BisI GCNGC 3 cut(s) 87, 90, 1641
BlsI GCNGC 3 cut(s) 88, 91, 1642
Bme1390I CCNGG 1 cut(s) 2281
BmgT120I GGNCC 2 cut(s) 674, 2336
BmiI GGNNCC 3 cut(s) 1011, 1898, 2286
BmrFI CCNGG 1 cut(s) 2281
BmsI GCATC 6 cut(s) 256, 412, 481, 513, 1216, 2372
BpiI GAAGAC 1 cut(s) 1785
BplI GAGNNNNNCTC 2 cut(s) 1503, 1535
BpmI CTGGAG 2 cut(s) 128, 1223
Bpu10I CCTNAGC 1 cut(s) 2063
Bpu14I TTCGAA 1 cut(s) 654
BpuEI CTTGAG 3 cut(s) 590, 593, 1309
BsaAI YACGTR 2 cut(s) 1761, 1767
BsaBI GATNNNNATC 1 cut(s) 1191
BsaI GGTCTC 1 cut(s) 891
BsaJI CCNNGG 1 cut(s) 2280
BsaWI WCCGGW 1 cut(s) 1899
Bsc4I CCNNNNNNNGG 2 cut(s) 464, 2001
Bse118I RCCGGY 1 cut(s) 1211
Bse1I ACTGG 6 cut(s) 111, 636, 1812, 2006, 2105, 2236
Bse8I GATNNNNATC 1 cut(s) 1191
BseAI TCCGGA 1 cut(s) 1899
BseBI CCWGG 1 cut(s) 2281
BseDI CCNNGG 1 cut(s) 2280
BseGI GGATG 8 cut(s) 271, 547, 748, 876, 1011, 1692, 1966, 2387
BseJI GATNNNNATC 1 cut(s) 1191
BseLI CCNNNNNNNGG 2 cut(s) 464, 2001
BseMII CTCAG 6 cut(s) 209, 519, 1968, 2030, 2054, 2264
BseNI ACTGG 6 cut(s) 111, 636, 1812, 2006, 2105, 2236
BseSI GKGCMC 1 cut(s) 1223
BseXI GCAGC 3 cut(s) 73, 76, 1627
BseYI CCCAGC 1 cut(s) 1673
BsgI GTGCAG 1 cut(s) 2217
BshFI GGCC 5 cut(s) 149, 676, 1496, 2279, 2338
BshNI GGYRCC 1 cut(s) 1009
BsiSI CCGG 2 cut(s) 1212, 1900
BslFI GGGAC 1 cut(s) 2300
BslI CCNNNNNNNGG 2 cut(s) 464, 2001
BsmAI GTCTC 3 cut(s) 891, 1686, 2035
BsmFI GGGAC 1 cut(s) 2300
BsmI GAATGC 4 cut(s) 363, 538, 1521, 2251
BsnI GGCC 5 cut(s) 149, 676, 1496, 2279, 2338
Bso31I GGTCTC 1 cut(s) 891
Bsp119I TTCGAA 1 cut(s) 654
Bsp1286I GDGCHC 1 cut(s) 1223
Bsp13I TCCGGA 1 cut(s) 1899
Bsp1407I TGTACA 1 cut(s) 722
Bsp143I GATC 6 cut(s) 112, 473, 1174, 1855, 2090, 2292
BspACI CCGC 1 cut(s) 2368
BspANI GGCC 5 cut(s) 149, 676, 1496, 2279, 2338
BspCNI CTCAG 6 cut(s) 208, 520, 1967, 2031, 2055, 2263
BspEI TCCGGA 1 cut(s) 1899
BspHI TCATGA 1 cut(s) 337
BspLI GGNNCC 3 cut(s) 1011, 1898, 2286
BspMAI CTGCAG 3 cut(s) 741, 811, 1645
BspPI GGATC 1 cut(s) 120
BspQI GCTCTTC 1 cut(s) 989
BspT104I TTCGAA 1 cut(s) 654
BspT107I GGYRCC 1 cut(s) 1009
BspTNI GGTCTC 1 cut(s) 891
BsrFI RCCGGY 1 cut(s) 1211
BsrGI TGTACA 1 cut(s) 722
BsrI ACTGG 6 cut(s) 111, 636, 1812, 2006, 2105, 2236
BssAI RCCGGY 1 cut(s) 1211
BssECI CCNNGG 1 cut(s) 2280
BssMI GATC 6 cut(s) 112, 473, 1174, 1855, 2090, 2292
BssNAI GTATAC 2 cut(s) 1338, 1764
Bst1107I GTATAC 2 cut(s) 1338, 1764
Bst2UI CCWGG 1 cut(s) 2281
Bst6I CTCTTC 2 cut(s) 782, 989
BstAPI GCANNNNNTGC 2 cut(s) 266, 379
BstAUI TGTACA 1 cut(s) 722
BstBAI YACGTR 2 cut(s) 1761, 1767
BstBI TTCGAA 1 cut(s) 654
BstC8I GCNNGC 4 cut(s) 375, 1370, 1498, 2340
BstDEI CTNAG 9 cut(s) 195, 279, 383, 414, 528, 1954, 2039, 2063, 2250
BstF5I GGATG 8 cut(s) 271, 547, 748, 876, 1011, 1692, 1966, 2387
BstH2I RGCGCY 1 cut(s) 1276
BstHHI GCGC 1 cut(s) 1275
BstKTI GATC 6 cut(s) 115, 476, 1177, 1858, 2093, 2295
BstMAI GTCTC 3 cut(s) 891, 1686, 2035
BstMBI GATC 6 cut(s) 112, 473, 1174, 1855, 2090, 2292
BstMWI GCNNNNNNNGC 8 cut(s) 95, 266, 379, 954, 1378, 1584, 1976, 2195
BstNI CCWGG 1 cut(s) 2281
BstNSI RCATGY 3 cut(s) 889, 1612, 2072
BstSCI CCNGG 1 cut(s) 2279
BstSFI CTRYAG 5 cut(s) 737, 807, 1132, 1641, 1891
BstSLI GKGCMC 1 cut(s) 1223
BstV1I GCAGC 3 cut(s) 73, 76, 1627
BstV2I GAAGAC 1 cut(s) 1785
BstX2I RGATCY 1 cut(s) 2090
BstXI CCANNNNNNTGG 1 cut(s) 585
BstYI RGATCY 1 cut(s) 2090
BstZ17I GTATAC 2 cut(s) 1338, 1764
BsuI GTATCC 1 cut(s) 225
BsuRI GGCC 5 cut(s) 149, 676, 1496, 2279, 2338
BtsCI GGATG 8 cut(s) 271, 547, 748, 876, 1011, 1692, 1966, 2387
BtsI GCAGTG 2 cut(s) 734, 816
BtsIMutI CAGTG 7 cut(s) 469, 734, 762, 816, 1869, 1951, 2036
Cac8I GCNNGC 4 cut(s) 375, 1370, 1498, 2340
CciI TCATGA 1 cut(s) 337
CfoI GCGC 1 cut(s) 1275
Cfr10I RCCGGY 1 cut(s) 1211
Cfr13I GGNCC 2 cut(s) 674, 2336
Csp6I GTAC 5 cut(s) 192, 723, 1712, 1888, 2110
CviQI GTAC 5 cut(s) 192, 723, 1712, 1888, 2110
DdeI CTNAG 9 cut(s) 195, 279, 383, 414, 528, 1954, 2039, 2063, 2250
DpnI GATC 6 cut(s) 114, 475, 1176, 1857, 2092, 2294
DpnII GATC 6 cut(s) 112, 473, 1174, 1855, 2090, 2292
DraI TTTAAA 2 cut(s) 238, 315
Eam1104I CTCTTC 2 cut(s) 782, 989
EarI CTCTTC 2 cut(s) 782, 989
Eco147I AGGCCT 2 cut(s) 149, 1496
Eco31I GGTCTC 1 cut(s) 891
Eco32I GATATC 2 cut(s) 731, 751
EcoRI GAATTC 1 cut(s) 1483
EcoRII CCWGG 1 cut(s) 2279
EcoRV GATATC 2 cut(s) 731, 751
EcoT22I ATGCAT 2 cut(s) 427, 2261
FalI AAGNNNNNCTT 2 cut(s) 366, 398
FaqI GGGAC 1 cut(s) 2300
FauNDI CATATG 2 cut(s) 1179, 2377
FblI GTMKAC 2 cut(s) 1337, 1763
Fnu4HI GCNGC 3 cut(s) 87, 90, 1641
FokI GGATG 7 cut(s) 278, 554, 755, 863, 1018, 1699, 1973
Fsp4HI GCNGC 3 cut(s) 87, 90, 1641
FspBI CTAG 1 cut(s) 2186
GlaI GCGC 1 cut(s) 1274
GluI GCNGC 3 cut(s) 87, 90, 1641
GsaI CCCAGC 1 cut(s) 1677
GsuI CTGGAG 2 cut(s) 128, 1223
HaeII RGCGCY 1 cut(s) 1276
HaeIII GGCC 5 cut(s) 149, 676, 1496, 2279, 2338
HapII CCGG 2 cut(s) 1212, 1900
HhaI GCGC 1 cut(s) 1275
Hin6I GCGC 1 cut(s) 1273
HinP1I GCGC 1 cut(s) 1273
HindIII AAGCTT 4 cut(s) 375, 646, 1599, 1977
HinfI GANTC 4 cut(s) 23, 452, 837, 1205
HpaII CCGG 2 cut(s) 1212, 1900
HphI GGTGA 5 cut(s) 76, 447, 481, 721, 1873
Hpy166II GTNNAC 4 cut(s) 691, 1338, 1764, 2112
Hpy188I TCNGA 6 cut(s) 38, 198, 230, 881, 2014, 2242
Hpy188III TCNNGA 9 cut(s) 161, 338, 407, 572, 776, 1202, 1853, 1900, 2309
Hpy8I GTNNAC 4 cut(s) 691, 1338, 1764, 2112
HpyAV CCTTC 6 cut(s) 1052, 1128, 1262, 1486, 1696, 2351
HpyCH4IV ACGT 2 cut(s) 1760, 1766
HpyF10VI GCNNNNNNNGC 8 cut(s) 95, 266, 379, 954, 1378, 1584, 1976, 2195
HpyF3I CTNAG 9 cut(s) 195, 279, 383, 414, 528, 1954, 2039, 2063, 2250
HpySE526I ACGT 2 cut(s) 1760, 1766
HspAI GCGC 1 cut(s) 1273
Kpn2I TCCGGA 1 cut(s) 1899
Kzo9I GATC 6 cut(s) 112, 473, 1174, 1855, 2090, 2292
LguI GCTCTTC 1 cut(s) 989
LmnI GCTCC 3 cut(s) 136, 1099, 1902
Lsp1109I GCAGC 3 cut(s) 73, 76, 1627
LweI GCATC 6 cut(s) 256, 412, 481, 513, 1216, 2372
MaeI CTAG 1 cut(s) 2186
MaeII ACGT 2 cut(s) 1760, 1766
MaeIII GTNAC 6 cut(s) 102, 1546, 1604, 1846, 1861, 2170
MalI GATC 6 cut(s) 114, 475, 1176, 1857, 2092, 2294
MboI GATC 6 cut(s) 112, 473, 1174, 1855, 2090, 2292
MboII GAAGA 8 cut(s) 565, 764, 799, 1006, 1711, 1785, 1846, 2139
MfeI CAATTG 1 cut(s) 2343
MflI RGATCY 1 cut(s) 2090
MhlI GDGCHC 1 cut(s) 1223
MlyI GAGTC 2 cut(s) 831, 1214
MmeI TCCRAC 2 cut(s) 963, 2220
Mph1103I ATGCAT 2 cut(s) 427, 2261
MroI TCCGGA 1 cut(s) 1899
MroXI GAANNNNTTC 1 cut(s) 828
MslI CAYNNNNRTG 2 cut(s) 704, 2380
MspI CCGG 2 cut(s) 1212, 1900
MspR9I CCNGG 1 cut(s) 2281
MunI CAATTG 1 cut(s) 2343
Mva1269I GAATGC 4 cut(s) 363, 538, 1521, 2251
MvaI CCWGG 1 cut(s) 2281
MwoI GCNNNNNNNGC 8 cut(s) 95, 266, 379, 954, 1378, 1584, 1976, 2195
NdeI CATATG 2 cut(s) 1179, 2377
NdeII GATC 6 cut(s) 112, 473, 1174, 1855, 2090, 2292
NlaIV GGNNCC 3 cut(s) 1011, 1898, 2286
NmuCI GTSAC 2 cut(s) 1546, 1861
NsiI ATGCAT 2 cut(s) 427, 2261
NspI RCATGY 3 cut(s) 889, 1612, 2072
NspV TTCGAA 1 cut(s) 654
PagI TCATGA 1 cut(s) 337
PceI AGGCCT 2 cut(s) 149, 1496
PciI ACATGT 1 cut(s) 1608
PciSI GCTCTTC 1 cut(s) 989
PctI GAATGC 4 cut(s) 363, 538, 1521, 2251
PdmI GAANNNNTTC 1 cut(s) 828
PfeI GAWTC 2 cut(s) 23, 452
PflMI CCANNNNNTGG 1 cut(s) 2001
PkrI GCNGC 3 cut(s) 88, 91, 1642
PleI GAGTC 2 cut(s) 831, 1213
PpsI GAGTC 2 cut(s) 831, 1213
Ppu21I YACGTR 2 cut(s) 1761, 1767
PscI ACATGT 1 cut(s) 1608
PsiI TTATAA 4 cut(s) 924, 1344, 1449, 1460
Psp6I CCWGG 1 cut(s) 2279
PspFI CCCAGC 1 cut(s) 1673
PspGI CCWGG 1 cut(s) 2279
PspN4I GGNNCC 3 cut(s) 1011, 1898, 2286
PspPI GGNCC 2 cut(s) 674, 2336
PstI CTGCAG 3 cut(s) 741, 811, 1645
PsuI RGATCY 1 cut(s) 2090
RsaI GTAC 5 cut(s) 193, 724, 1713, 1889, 2111
RsaNI GTAC 5 cut(s) 192, 723, 1712, 1888, 2110
RseI CAYNNNNRTG 2 cut(s) 704, 2380
SapI GCTCTTC 1 cut(s) 989
SatI GCNGC 3 cut(s) 87, 90, 1641
Sau3AI GATC 6 cut(s) 112, 473, 1174, 1855, 2090, 2292
Sau96I GGNCC 2 cut(s) 674, 2336
SchI GAGTC 2 cut(s) 831, 1214
ScrFI CCNGG 1 cut(s) 2281
SduI GDGCHC 1 cut(s) 1223
SfaNI GCATC 6 cut(s) 256, 412, 481, 513, 1216, 2372
SfcI CTRYAG 5 cut(s) 737, 807, 1132, 1641, 1891
SfuI TTCGAA 1 cut(s) 654
SmiMI CAYNNNNRTG 2 cut(s) 704, 2380
SmlI CTYRAG 3 cut(s) 572, 605, 1288
SmoI CTYRAG 3 cut(s) 572, 605, 1288
SseBI AGGCCT 2 cut(s) 149, 1496
SsiI CCGC 1 cut(s) 2368
SspI AATATT 2 cut(s) 1906, 2077
SspMI CTAG 1 cut(s) 2186
StuI AGGCCT 2 cut(s) 149, 1496
StyD4I CCNGG 1 cut(s) 2279
TaiI ACGT 2 cut(s) 1763, 1769
TaqI TCGA 3 cut(s) 521, 654, 2310
TatI WGTACW 2 cut(s) 191, 722
TfiI GAWTC 2 cut(s) 23, 452
TscAI CASTG 7 cut(s) 469, 741, 769, 816, 1876, 1951, 2043
TseFI GTSAC 2 cut(s) 1546, 1861
TseI GCWGC 3 cut(s) 86, 89, 1640
Tsp45I GTSAC 2 cut(s) 1546, 1861
TspRI CASTG 7 cut(s) 469, 741, 769, 816, 1876, 1951, 2043
Van91I CCANNNNNTGG 1 cut(s) 2001
XapI RAATTY 4 cut(s) 208, 341, 1483, 2119
XceI RCATGY 3 cut(s) 889, 1612, 2072
XcmI CCANNNNNNNNNTGG 2 cut(s) 1389, 1978
XmiI GTMKAC 2 cut(s) 1337, 1763
XmnI GAANNNNTTC 1 cut(s) 828
XspI CTAG 1 cut(s) 2186
Zsp2I ATGCAT 2 cut(s) 427, 2261
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.