One of the components of the core complex of photosystem II (PSII), required for its stability and or assembly. PSII is a light-driven water plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | ATCG00710 |
| malus_domestica | MD04G1032200.v1.1 |
| prunus_persica | Prupe.7G021700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0125331 RchiOBHm_Chr2g0140191 RchiOBHm_Chr4g0390611 RchiOBHm_Chr6g0260481 RchiOBHm_CPg0501961 |
| rosa_multiflora | Rmu_sc0002631.1_g000006 |
| rosa_roxburghii | Rroxscaffold_2G00107500 Rroxscaffold_2G00151780 Rroxscaffold_5G00336580 |
| rosa_samantha | Rh2CG305100 Rh2DG341400 Rh6CG170200 |
| rosa_wichuraiana | Rw1G022260 Rw7G013580 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 186 |
| AciI | CCGC | 1 cut(s) | 40 |
| AclI | AACGTT | 1 cut(s) | 15 |
| AcoI | YGGCCR | 1 cut(s) | 37 |
| AcsI | RAATTY | 2 cut(s) | 82, 210 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 113, 131 |
| AgsI | TTSAA | 3 cut(s) | 73, 82, 216 |
| AjnI | CCWGG | 1 cut(s) | 106 |
| Alw26I | GTCTC | 1 cut(s) | 140 |
| AoxI | GGCC | 1 cut(s) | 37 |
| ApoI | RAATTY | 2 cut(s) | 82, 210 |
| BccI | CCATC | 1 cut(s) | 124 |
| BciT130I | CCWGG | 1 cut(s) | 108 |
| BcoDI | GTCTC | 1 cut(s) | 140 |
| BfaI | CTAG | 2 cut(s) | 30, 203 |
| BglII | AGATCT | 1 cut(s) | 32 |
| BisI | GCNGC | 1 cut(s) | 40 |
| BlsI | GCNGC | 1 cut(s) | 41 |
| Bme1390I | CCNGG | 1 cut(s) | 108 |
| BmrFI | CCNGG | 1 cut(s) | 108 |
| Bsa29I | ATCGAT | 1 cut(s) | 167 |
| BsaI | GGTCTC | 1 cut(s) | 140 |
| BsaJI | CCNNGG | 1 cut(s) | 107 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 113, 131 |
| Bse3DI | GCAATG | 1 cut(s) | 147 |
| BseBI | CCWGG | 1 cut(s) | 108 |
| BseCI | ATCGAT | 1 cut(s) | 167 |
| BseDI | CCNNGG | 1 cut(s) | 107 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 113, 131 |
| BseMI | GCAATG | 1 cut(s) | 147 |
| BshFI | GGCC | 1 cut(s) | 39 |
| BshVI | ATCGAT | 1 cut(s) | 167 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 113, 131 |
| BsmAI | GTCTC | 1 cut(s) | 140 |
| BsnI | GGCC | 1 cut(s) | 39 |
| Bso31I | GGTCTC | 1 cut(s) | 140 |
| Bsp143I | GATC | 1 cut(s) | 32 |
| BspACI | CCGC | 1 cut(s) | 40 |
| BspANI | GGCC | 1 cut(s) | 39 |
| BspDI | ATCGAT | 1 cut(s) | 167 |
| BspTNI | GGTCTC | 1 cut(s) | 140 |
| BsrDI | GCAATG | 1 cut(s) | 147 |
| BssECI | CCNNGG | 1 cut(s) | 107 |
| BssMI | GATC | 1 cut(s) | 32 |
| Bst2UI | CCWGG | 1 cut(s) | 108 |
| BstKTI | GATC | 1 cut(s) | 35 |
| BstMAI | GTCTC | 1 cut(s) | 140 |
| BstMBI | GATC | 1 cut(s) | 32 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 152 |
| BstNI | CCWGG | 1 cut(s) | 108 |
| BstSCI | CCNGG | 1 cut(s) | 106 |
| BstX2I | RGATCY | 1 cut(s) | 32 |
| BstYI | RGATCY | 1 cut(s) | 32 |
| Bsu15I | ATCGAT | 1 cut(s) | 167 |
| BsuRI | GGCC | 1 cut(s) | 39 |
| BsuTUI | ATCGAT | 1 cut(s) | 167 |
| ClaI | ATCGAT | 1 cut(s) | 167 |
| CviJI | RGCY | 3 cut(s) | 5, 39, 146 |
| CviKI_1 | RGCY | 3 cut(s) | 5, 39, 146 |
| DpnI | GATC | 1 cut(s) | 34 |
| DpnII | GATC | 1 cut(s) | 32 |
| EaeI | YGGCCR | 1 cut(s) | 37 |
| Eco31I | GGTCTC | 1 cut(s) | 140 |
| EcoRI | GAATTC | 1 cut(s) | 82 |
| EcoRII | CCWGG | 1 cut(s) | 106 |
| FaiI | YATR | 2 cut(s) | 93, 186 |
| Fnu4HI | GCNGC | 1 cut(s) | 40 |
| Fsp4HI | GCNGC | 1 cut(s) | 40 |
| FspBI | CTAG | 2 cut(s) | 30, 203 |
| GluI | GCNGC | 1 cut(s) | 40 |
| HaeIII | GGCC | 1 cut(s) | 39 |
| Hpy188I | TCNGA | 1 cut(s) | 88 |
| Hpy188III | TCNNGA | 1 cut(s) | 30 |
| HpyCH4IV | ACGT | 1 cut(s) | 15 |
| HpyCH4V | TGCA | 1 cut(s) | 155 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 152 |
| HpySE526I | ACGT | 1 cut(s) | 15 |
| Kzo9I | GATC | 1 cut(s) | 32 |
| LpnPI | CCDG | 3 cut(s) | 21, 93, 120 |
| MaeI | CTAG | 2 cut(s) | 30, 203 |
| MaeII | ACGT | 1 cut(s) | 15 |
| MaeIII | GTNAC | 1 cut(s) | 100 |
| MalI | GATC | 1 cut(s) | 34 |
| MboI | GATC | 1 cut(s) | 32 |
| MboII | GAAGA | 1 cut(s) | 183 |
| MflI | RGATCY | 1 cut(s) | 32 |
| MluCI | AATT | 4 cut(s) | 82, 187, 210, 220 |
| MnlI | CCTC | 1 cut(s) | 13 |
| MspR9I | CCNGG | 1 cut(s) | 108 |
| MvaI | CCWGG | 1 cut(s) | 108 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 152 |
| NdeII | GATC | 1 cut(s) | 32 |
| PkrI | GCNGC | 1 cut(s) | 41 |
| PsiI | TTATAA | 1 cut(s) | 186 |
| Psp1406I | AACGTT | 1 cut(s) | 15 |
| Psp6I | CCWGG | 1 cut(s) | 106 |
| PspGI | CCWGG | 1 cut(s) | 106 |
| PsuI | RGATCY | 1 cut(s) | 32 |
| SatI | GCNGC | 1 cut(s) | 40 |
| Sau3AI | GATC | 1 cut(s) | 32 |
| ScrFI | CCNGG | 1 cut(s) | 108 |
| SetI | ASST | 1 cut(s) | 18 |
| SgeI | CNNG | 6 cut(s) | 42, 48, 119, 120, 149, 215 |
| Sse9I | AATT | 4 cut(s) | 82, 187, 210, 220 |
| SsiI | CCGC | 1 cut(s) | 40 |
| SspI | AATATT | 1 cut(s) | 159 |
| SspMI | CTAG | 2 cut(s) | 30, 203 |
| StyD4I | CCNGG | 1 cut(s) | 106 |
| TaiI | ACGT | 1 cut(s) | 18 |
| TaqI | TCGA | 1 cut(s) | 167 |
| TasI | AATT | 4 cut(s) | 82, 187, 210, 220 |
| TauI | GCSGC | 1 cut(s) | 42 |
| TspDTI | ATGAA | 1 cut(s) | 222 |
| XapI | RAATTY | 2 cut(s) | 82, 210 |
| XbaI | TCTAGA | 1 cut(s) | 29 |
| XspI | CTAG | 2 cut(s) | 30, 203 |