Prupe.7G022100_v2.0.a1

SNAP receptor activity

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
3411391 .. 3415005
3615 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G022100.5

Sequence Viewer

Length: 693 bp
ATGGCATCTCCTGACTCATGGATGCGAGAATTCAATGATGCTTCAAAGCTTGCTGATGAAATCAATGGTATGATTTCTGGAAGGAGTTCATTGCCACCCTCTGGACCCGAAACACAACGTCATATGTCTGCAACTCGAAGAAAGGTTACAATACTAAGGACAAAGCTTGAGACTTTGCAGTCACTCTTGTCTAAACTTCCTAACAAGCAGTCAATAACAGGGAAAGAAATAAATCGTCGTAAAGATATGCTCACAAATTTGAGTTCTAAAGCTGATCAAATGGCTATTGCTCTCAACATGTCTAGCCTTGCTAATAAACAGAACTTGCTTGGCCCTGATAAGAAGATGGATGATATAATGAGAAGAACGGAAGATTTAGACAACCATGGTCTTGTTAGCTTTCAACGGCAAATCATGAAGGAACAAGATGAAGGACTTGGAAAATTGGAGGAGACAGTTATTAGTACAAAACACATAGCGTTGGCAGTAAATGAAGAGCTTGATCTGCACACTATGCTTCTGGATAATCTGGACCAGCATGTGGACTCAACAAATTCCAACCTACAGCGGGTGCAAAAGAAATTTGCTGTGCTGAACAAACGCACCAAAGGCGGTTGTTCTTCTTTGATCCTACTGGTTCTTGCGGTTGTGATTTTAATAATTGTTACCTGGGCATTGATTAAGTACTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000138 GO:0000149 GO:0000322 GO:0000323 GO:0000324 GO:0000329 GO:0000407 GO:0001505 GO:0002376 GO:0003674 GO:0005484 GO:0005488 GO:0005515 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005765 GO:0005768 GO:0005769 GO:0005770 GO:0005773 GO:0005774 GO:0005783 GO:0005794 GO:0005795 GO:0005802 GO:0005886 GO:0005887 GO:0006810 GO:0006836 GO:0006886 GO:0006887 GO:0006892 GO:0006896 GO:0006904 GO:0006906 GO:0006914 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0007033 GO:0007034 GO:0007041 GO:0007154 GO:0007267 GO:0007268 GO:0007269 GO:0008104 GO:0008150 GO:0008152 GO:0008200 GO:0008289 GO:0008333 GO:0009056 GO:0009987 GO:0010008 GO:0010033 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016021 GO:0016043 GO:0016050 GO:0016079 GO:0016081 GO:0016192 GO:0016236 GO:0016237 GO:0016247 GO:0016248 GO:0016482 GO:0017081 GO:0017156 GO:0019869 GO:0019899 GO:0019905 GO:0022406 GO:0023052 GO:0023061 GO:0030139 GO:0031090 GO:0031201 GO:0031224 GO:0031226 GO:0031410 GO:0031625 GO:0031902 GO:0031982 GO:0031984 GO:0031985 GO:0032258 GO:0032266 GO:0032879 GO:0032880 GO:0032940 GO:0032991 GO:0033036 GO:0033365 GO:0034097 GO:0034341 GO:0034613 GO:0034727 GO:0035091 GO:0042144 GO:0042221 GO:0042886 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044389 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044433 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0044804 GO:0045022 GO:0045055 GO:0045087 GO:0045184 GO:0045335 GO:0046903 GO:0046907 GO:0048193 GO:0048278 GO:0048284 GO:0048471 GO:0048489 GO:0050789 GO:0050896 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0051716 GO:0055037 GO:0060341 GO:0061024 GO:0061025 GO:0061919 GO:0065007 GO:0065008 GO:0065009 GO:0070727 GO:0070887 GO:0071310 GO:0071345 GO:0071346 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:0072665 GO:0090174 GO:0097479 GO:0097480 GO:0097576 GO:0097708 GO:0098588 GO:0098772 GO:0098791 GO:0098796 GO:0098805 GO:0098852 GO:0098916 GO:0098927 GO:0099003 GO:0099106 GO:0099504 GO:0099536 GO:0099537 GO:0099643 GO:0140029 GO:0140056 GO:1901981 GO:1903076 GO:1903827 GO:1904375 GO:1905475
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

231

Amino Acids

25.82

Weight (kDa)

9.3

Isoelectric Point (pI)

54.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 178
AccB7I CCANNNNNTGG 2 cut(s) 101, 541
AciI CCGC 3 cut(s) 568, 612, 644
AclWI GGATC 1 cut(s) 622
AcsI RAATTY 4 cut(s) 29, 256, 553, 581
AfaI GTAC 2 cut(s) 466, 686
AfiI CCNNNNNNNGG 3 cut(s) 101, 541, 568
AflIII ACRYGT 1 cut(s) 297
AgsI TTSAA 3 cut(s) 34, 45, 404
AjnI CCWGG 1 cut(s) 668
AluBI AGCT 5 cut(s) 49, 166, 272, 399, 499
AluI AGCT 5 cut(s) 49, 166, 272, 399, 499
Alw26I GTCTC 2 cut(s) 164, 446
AlwI GGATC 1 cut(s) 622
AoxI GGCC 1 cut(s) 331
ApoI RAATTY 4 cut(s) 29, 256, 553, 581
Asp700I GAANNNNTTC 1 cut(s) 85
AspS9I GGNCC 3 cut(s) 104, 332, 532
AvaII GGWCC 2 cut(s) 104, 532
BarI GAAGNNNNNNTAC 2 cut(s) 130, 162
BccI CCATC 1 cut(s) 340
BceAI ACGGC 1 cut(s) 422
BciT130I CCWGG 1 cut(s) 670
BclI TGATCA 1 cut(s) 274
BcoDI GTCTC 2 cut(s) 164, 446
BfaI CTAG 1 cut(s) 303
BfmI CTRYAG 1 cut(s) 563
BmcAI AGTACT 1 cut(s) 686
Bme1390I CCNGG 1 cut(s) 670
Bme18I GGWCC 2 cut(s) 104, 532
BmgT120I GGNCC 3 cut(s) 104, 332, 532
BmiI GGNNCC 1 cut(s) 106
BmrFI CCNGG 1 cut(s) 670
BmsI GCATC 3 cut(s) 12, 14, 28
BpuEI CTTGAG 1 cut(s) 188
BsaJI CCNNGG 2 cut(s) 385, 669
Bsc4I CCNNNNNNNGG 3 cut(s) 101, 541, 568
Bse1I ACTGG 1 cut(s) 639
Bse3DI GCAATG 1 cut(s) 89
BseBI CCWGG 1 cut(s) 670
BseDI CCNNGG 2 cut(s) 385, 669
BseGI GGATG 2 cut(s) 27, 355
BseLI CCNNNNNNNGG 3 cut(s) 101, 541, 568
BseMI GCAATG 1 cut(s) 89
BseNI ACTGG 1 cut(s) 639
BseRI GAGGAG 1 cut(s) 464
BsgI GTGCAG 1 cut(s) 491
BshFI GGCC 1 cut(s) 333
BslI CCNNNNNNNGG 3 cut(s) 101, 541, 568
BsmAI GTCTC 2 cut(s) 164, 446
BsnI GGCC 1 cut(s) 333
Bsp143I GATC 3 cut(s) 274, 502, 627
Bsp19I CCATGG 1 cut(s) 385
BspACI CCGC 3 cut(s) 568, 612, 644
BspANI GGCC 1 cut(s) 333
BspHI TCATGA 1 cut(s) 414
BspLI GGNNCC 1 cut(s) 106
BspPI GGATC 1 cut(s) 622
BspQI GCTCTTC 1 cut(s) 489
BsrDI GCAATG 1 cut(s) 89
BsrI ACTGG 1 cut(s) 639
BssECI CCNNGG 2 cut(s) 385, 669
BssMI GATC 3 cut(s) 274, 502, 627
BssT1I CCWWGG 1 cut(s) 385
Bst2UI CCWGG 1 cut(s) 670
Bst4CI ACNGT 1 cut(s) 457
Bst6I CTCTTC 1 cut(s) 489
BstAPI GCANNNNNTGC 1 cut(s) 514
BstC8I GCNNGC 1 cut(s) 51
BstDEI CTNAG 1 cut(s) 155
BstDSI CCRYGG 1 cut(s) 385
BstF5I GGATG 2 cut(s) 27, 355
BstKTI GATC 3 cut(s) 277, 505, 630
BstMAI GTCTC 2 cut(s) 164, 446
BstMBI GATC 3 cut(s) 274, 502, 627
BstMWI GCNNNNNNNGC 3 cut(s) 505, 514, 609
BstNI CCWGG 1 cut(s) 670
BstNSI RCATGY 2 cut(s) 301, 542
BstSCI CCNGG 1 cut(s) 668
BstSFI CTRYAG 1 cut(s) 563
BsuRI GGCC 1 cut(s) 333
BtgI CCRYGG 1 cut(s) 385
BtsCI GGATG 2 cut(s) 27, 355
Cac8I GCNNGC 1 cut(s) 51
CciI TCATGA 1 cut(s) 414
Cfr13I GGNCC 3 cut(s) 104, 332, 532
Csp6I GTAC 2 cut(s) 465, 685
CviAII CATG 5 cut(s) 18, 298, 386, 415, 539
CviJI RGCY 8 cut(s) 49, 166, 272, 284, 306, 333, 399, 499
CviKI_1 RGCY 8 cut(s) 49, 166, 272, 284, 306, 333, 399, 499
CviQI GTAC 2 cut(s) 465, 685
DdeI CTNAG 1 cut(s) 155
DpnI GATC 3 cut(s) 276, 504, 629
DpnII GATC 3 cut(s) 274, 502, 627
DrdI GACNNNNNNGTC 1 cut(s) 178
DseDI GACNNNNNNGTC 1 cut(s) 178
Eam1104I CTCTTC 1 cut(s) 489
EarI CTCTTC 1 cut(s) 489
Eco130I CCWWGG 1 cut(s) 385
Eco47I GGWCC 2 cut(s) 104, 532
EcoRI GAATTC 1 cut(s) 29
EcoRII CCWGG 1 cut(s) 668
EcoT14I CCWWGG 1 cut(s) 385
ErhI CCWWGG 1 cut(s) 385
FaeI CATG 5 cut(s) 21, 301, 389, 418, 542
FatI CATG 5 cut(s) 17, 297, 385, 414, 538
FauI CCCGC 1 cut(s) 561
FauNDI CATATG 1 cut(s) 123
FbaI TGATCA 1 cut(s) 274
FokI GGATG 2 cut(s) 34, 362
FspBI CTAG 1 cut(s) 303
HaeIII GGCC 1 cut(s) 333
Hin1II CATG 5 cut(s) 21, 301, 389, 418, 542
HindIII AAGCTT 2 cut(s) 47, 164
HinfI GANTC 2 cut(s) 14, 545
Hpy166II GTNNAC 1 cut(s) 544
Hpy188III TCNNGA 6 cut(s) 11, 78, 102, 415, 521, 530
Hpy8I GTNNAC 1 cut(s) 544
Hpy99I CGWCG 1 cut(s) 240
HpyAV CCTTC 3 cut(s) 75, 412, 425
HpyCH4III ACNGT 1 cut(s) 457
HpyCH4IV ACGT 1 cut(s) 118
HpyCH4V TGCA 4 cut(s) 131, 178, 508, 574
HpyF10VI GCNNNNNNNGC 3 cut(s) 505, 514, 609
HpyF3I CTNAG 1 cut(s) 155
HpySE526I ACGT 1 cut(s) 118
Hsp92II CATG 5 cut(s) 21, 301, 389, 418, 542
Ksp22I TGATCA 1 cut(s) 274
Kzo9I GATC 3 cut(s) 274, 502, 627
LguI GCTCTTC 1 cut(s) 489
LweI GCATC 3 cut(s) 12, 14, 28
MaeI CTAG 1 cut(s) 303
MaeII ACGT 1 cut(s) 118
MaeIII GTNAC 3 cut(s) 145, 180, 664
MalI GATC 3 cut(s) 276, 504, 629
MboI GATC 3 cut(s) 274, 502, 627
MboII GAAGA 6 cut(s) 150, 355, 375, 383, 506, 612
MluCI AATT 6 cut(s) 29, 256, 443, 553, 581, 660
MlyI GAGTC 2 cut(s) 8, 539
MmeI TCCRAC 1 cut(s) 582
MnlI CCTC 2 cut(s) 109, 442
MroXI GAANNNNTTC 1 cut(s) 85
MseI TTAA 2 cut(s) 656, 681
MspA1I CMGCKG 1 cut(s) 568
MspR9I CCNGG 1 cut(s) 670
MvaI CCWGG 1 cut(s) 670
MwoI GCNNNNNNNGC 3 cut(s) 505, 514, 609
NcoI CCATGG 1 cut(s) 385
NdeI CATATG 1 cut(s) 123
NdeII GATC 3 cut(s) 274, 502, 627
NlaIII CATG 5 cut(s) 21, 301, 389, 418, 542
NlaIV GGNNCC 1 cut(s) 106
NmuCI GTSAC 1 cut(s) 180
NspI RCATGY 2 cut(s) 301, 542
PagI TCATGA 1 cut(s) 414
PciI ACATGT 1 cut(s) 297
PciSI GCTCTTC 1 cut(s) 489
PdmI GAANNNNTTC 1 cut(s) 85
PflMI CCANNNNNTGG 2 cut(s) 101, 541
PleI GAGTC 2 cut(s) 8, 539
PpsI GAGTC 2 cut(s) 8, 539
PscI ACATGT 1 cut(s) 297
Psp6I CCWGG 1 cut(s) 668
PspGI CCWGG 1 cut(s) 668
PspN4I GGNNCC 1 cut(s) 106
PspPI GGNCC 3 cut(s) 104, 332, 532
RsaI GTAC 2 cut(s) 466, 686
RsaNI GTAC 2 cut(s) 465, 685
SapI GCTCTTC 1 cut(s) 489
SaqAI TTAA 2 cut(s) 656, 681
Sau3AI GATC 3 cut(s) 274, 502, 627
Sau96I GGNCC 3 cut(s) 104, 332, 532
ScaI AGTACT 1 cut(s) 686
SchI GAGTC 2 cut(s) 8, 539
ScrFI CCNGG 1 cut(s) 670
SetI ASST 9 cut(s) 51, 121, 147, 168, 274, 401, 501, 564, 671
SfaNI GCATC 3 cut(s) 12, 14, 28
SfcI CTRYAG 1 cut(s) 563
SinI GGWCC 2 cut(s) 104, 532
SmlI CTYRAG 1 cut(s) 167
SmoI CTYRAG 1 cut(s) 167
Sse9I AATT 6 cut(s) 29, 256, 443, 553, 581, 660
SsiI CCGC 3 cut(s) 568, 612, 644
SspMI CTAG 1 cut(s) 303
StyD4I CCNGG 1 cut(s) 668
StyI CCWWGG 1 cut(s) 385
TaaI ACNGT 1 cut(s) 457
TaiI ACGT 1 cut(s) 121
TaqI TCGA 1 cut(s) 136
TasI AATT 6 cut(s) 29, 256, 443, 553, 581, 660
TatI WGTACW 2 cut(s) 464, 684
Tru1I TTAA 2 cut(s) 656, 681
Tru9I TTAA 2 cut(s) 656, 681
TseFI GTSAC 1 cut(s) 180
Tsp45I GTSAC 1 cut(s) 180
TspDTI ATGAA 5 cut(s) 72, 78, 431, 444, 507
TspGWI ACGGA 1 cut(s) 383
Van91I CCANNNNNTGG 2 cut(s) 101, 541
VpaK11BI GGWCC 2 cut(s) 104, 532
XapI RAATTY 4 cut(s) 29, 256, 553, 581
XceI RCATGY 2 cut(s) 301, 542
XmnI GAANNNNTTC 1 cut(s) 85
XspI CTAG 1 cut(s) 303
ZrmI AGTACT 1 cut(s) 686
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.