Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0004591

Physical Location & Seq

Genomic Coordinates Forward (+)

4099321 .. 4104179

Gene Structure 4859 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G025400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1209 bp

ATGAGAGGTTCTGTGTTGCCTTCGGTCCAGATGAAAAAATCCTTTGCATGGCGGCCGCAATTGATGAAGGATATTATGATCATGTCTAAGTCAAGGCCTCGTCCACCATTGAAAAGACCAACATGGATTATTGCATTGGTTTCGTTCGTCTGTGTTTTTTTTACTGCAGCCTATTTCTACCCACCGAGAAGCTCTGCCACCTGCTATCTCTTTTCTTCTAGTGGTTGTACTGTGTTTGGAAAGGATCCACCTGGTCCTGCAAGGGAATTGACTGATGATGAGACTGCATCTGATGTTGTAGTTAAGGAAATTCTCAAGACACCTCCTCTTCAATCAAAGAACCCCAAAATTGCTTTCATGTTTTTAACTCCTGGTACATTACCTTTTGAGGAGTTGTGGGAAAATTTCTTTCAAGGCCATGAGGACAAATTCACTGTTTATGTACATGCTTCTAAGCAAAAACCAGTACATGTGAGCCGTTATTTTGTTGACAGAGACGTACATAGTGAGCAGGTCGTTTGGGGAAAATTTTCAATGGTTGAGGCAGAGAAGAGACTTTTGGCAAATGCACTTTTAGACCCTGACAACCAACATTTTGTCTTGCTGTCTGATAGTTGTATACCACTACATAACTTCGATTATGTATATAATTATCTCATGTACACAAACGTCAGCTTTATTGATTGTTTTGTTGATCCTGGTCCACATGGAACTGGCCGGTATTCAGAACATATGTTGCCTGAAGTTGAAAAGAAGGATTTTCGGAAGGGTTCACAGTGGTTCTCTATGAAGCGGCAACATGCAATTGTCATGATGGCAGATAGTCTTTACTATACAAAGTTCAAGCTGTACTGCAGGCCAAACATGGATGGGCGCAACTGCTATTCGGACGAGCATTACCTGCCAACTTTCTTTCAAATGAAAGATCCTAGTGGACTTGCGAATTGGTCAGTAACATATGTTGATTGGTCTGAAGGGAAGTGGCATCCAAGAGCATATAGAACTCAGGATGTTACTTATGACCTCCTTAGGAACATCACGTCCATCGCTGAGAGCACACATATTACAAGCGAAGACAAGAAGCAATTACTGACCACTCCTTGCTTGTGGAATGGGATGAAGAGACCCTGTTTTCTATTTGCCAGAAAGTTTTATCCTGAAACTTTGGGGAAACTGCTGCAGCTTTTCTCCAATTACACAAAAGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Branch

Protein Analysis

403

Amino Acids

46.78

Weight (kDa)

8.85

Isoelectric Point (pI)

39.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004591)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31350 AT4G31350 AT4G31350 AT4G31350
fragaria_vesca	FvH4_2g30700 FvH4_2g30700 FvH4_2g30700 FvH4_2g30700 FvH4_2g30700
malus_domestica	MD00G1173000.v1.1 MD08G1134100.v1.1 MD15G1109800.v1.1
prunus_persica	Prupe.7G025400_v2.0.a1
pyrus_communis	pycom08g11290 pycom15g09990
rosa_chinensis	RchiOBHm_Chr6g0312191
rosa_laevigata	RLG00000010344
rosa_multiflora	Rmu_co8277175.1_g000001 Rmu_sc0010924.1_g000007
rosa_roxburghii	Rroxscaffold_7G00156970
rosa_rugosa	Rorug06G0393700 Rorug06G0393800 Rorug06G0393800 Rorug06G0393900 Rorug06G0394000 Rorug06G0394000
rosa_samantha	Rh6AG510700 Rh6BG521800 Rh6CG527700 Rh6DG513100
rosa_wichuraiana	Rw6G044420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	209
Acc36I	ACCTGC	3 cut(s)	209, 502, 909
AccI	GTMKAC	1 cut(s)	619
AciI	CCGC	3 cut(s)	52, 56, 793
AclWI	GGATC	4 cut(s)	239, 252, 689, 920
AcoI	YGGCCR	2 cut(s)	53, 715
AcsI	RAATTY	4 cut(s)	309, 403, 428, 527
AcuI	CTGAAG	2 cut(s)	762, 993
AfaI	GTAC	7 cut(s)	229, 376, 444, 468, 501, 662, 851
AfiI	CCNNNNNNNGG	1 cut(s)	48
AflIII	ACRYGT	1 cut(s)	469
AgsI	TTSAA	7 cut(s)	112, 332, 413, 534, 749, 844, 917
AjiI	CACGTC	1 cut(s)	1041
AjnI	CCWGG	3 cut(s)	250, 370, 697
AjuI	GAANNNNNNNTTGG	4 cut(s)	338, 370, 542, 574
AloI	GAACNNNNNNTCC	2 cut(s)	1025, 1057
AluBI	AGCT	4 cut(s)	192, 675, 847, 1183
AluI	AGCT	4 cut(s)	192, 675, 847, 1183
Alw21I	GWGCWC	1 cut(s)	1058
Alw26I	GTCTC	4 cut(s)	275, 489, 547, 1117
AlwI	GGATC	4 cut(s)	239, 252, 689, 920
AoxI	GGCC	5 cut(s)	53, 95, 415, 715, 857
ApeKI	GCWGC	3 cut(s)	167, 1177, 1180
ApoI	RAATTY	4 cut(s)	309, 403, 428, 527
Asp700I	GAANNNNTTC	1 cut(s)	529
AspLEI	GCGC	1 cut(s)	876
AspS9I	GGNCC	3 cut(s)	25, 254, 701
AvaII	GGWCC	3 cut(s)	25, 254, 701
AxyI	CCTNAGG	1 cut(s)	1028
BamHI	GGATCC	1 cut(s)	244
BbsI	GAAGAC	1 cut(s)	1080
Bbv12I	GWGCWC	1 cut(s)	1058
BbvI	GCAGC	3 cut(s)	179, 1164, 1192
BccI	CCATC	3 cut(s)	808, 863, 1052
BceAI	ACGGC	1 cut(s)	462
BcgI	CGANNNNNNTGC	2 cut(s)	123, 157
BciT130I	CCWGG	3 cut(s)	252, 372, 699
BclI	TGATCA	1 cut(s)	78
BcoDI	GTCTC	4 cut(s)	275, 489, 547, 1117
BfaI	CTAG	2 cut(s)	219, 930
BfmI	CTRYAG	3 cut(s)	165, 853, 1178
BfuAI	ACCTGC	3 cut(s)	209, 502, 909
BisI	GCNGC	6 cut(s)	53, 56, 168, 794, 1178, 1181
BlsI	GCNGC	6 cut(s)	54, 57, 169, 795, 1179, 1182
Bme1390I	CCNGG	3 cut(s)	252, 372, 699
Bme18I	GGWCC	3 cut(s)	25, 254, 701
BmgBI	CACGTC	1 cut(s)	1041
BmgT120I	GGNCC	3 cut(s)	25, 254, 701
BmiI	GGNNCC	1 cut(s)	246
BmrFI	CCNGG	3 cut(s)	252, 372, 699
BmsI	GCATC	2 cut(s)	296, 994
BpiI	GAAGAC	1 cut(s)	1080
BpuEI	CTTGAG	1 cut(s)	299
BsaI	GGTCTC	1 cut(s)	1117
Bsc4I	CCNNNNNNNGG	1 cut(s)	48
Bse118I	RCCGGY	1 cut(s)	717
Bse1I	ACTGG	2 cut(s)	464, 718
Bse21I	CCTNAGG	1 cut(s)	1028
BseBI	CCWGG	3 cut(s)	252, 372, 699
BseGI	GGATG	4 cut(s)	874, 985, 1015, 1122
BseLI	CCNNNNNNNGG	1 cut(s)	48
BseMII	CTCAG	2 cut(s)	1019, 1041
BseNI	ACTGG	2 cut(s)	464, 718
BseRI	GAGGAG	2 cut(s)	315, 404
BseX3I	CGGCCG	1 cut(s)	53
BseXI	GCAGC	3 cut(s)	179, 1164, 1192
Bsh1285I	CGRYCG	1 cut(s)	56
BshFI	GGCC	5 cut(s)	55, 97, 417, 717, 859
BsiEI	CGRYCG	1 cut(s)	56
BsiHKAI	GWGCWC	1 cut(s)	1058
BsiSI	CCGG	1 cut(s)	718
BslI	CCNNNNNNNGG	1 cut(s)	48
BsmAI	GTCTC	4 cut(s)	275, 489, 547, 1117
BsmBI	CGTCTC	1 cut(s)	489
BsnI	GGCC	5 cut(s)	55, 97, 417, 717, 859
Bso31I	GGTCTC	1 cut(s)	1117
Bsp1286I	GDGCHC	1 cut(s)	1058
Bsp1407I	TGTACA	2 cut(s)	442, 660
Bsp143I	GATC	4 cut(s)	78, 244, 694, 925
BspACI	CCGC	3 cut(s)	52, 56, 793
BspANI	GGCC	5 cut(s)	55, 97, 417, 717, 859
BspCNI	CTCAG	2 cut(s)	1018, 1042
BspHI	TCATGA	1 cut(s)	810
BspLI	GGNNCC	1 cut(s)	246
BspMAI	CTGCAG	3 cut(s)	169, 857, 1182
BspMI	ACCTGC	3 cut(s)	209, 502, 909
BspPI	GGATC	4 cut(s)	239, 252, 689, 920
BspTNI	GGTCTC	1 cut(s)	1117
BsrFI	RCCGGY	1 cut(s)	717
BsrGI	TGTACA	2 cut(s)	442, 660
BsrI	ACTGG	2 cut(s)	464, 718
BssAI	RCCGGY	1 cut(s)	717
BssMI	GATC	4 cut(s)	78, 244, 694, 925
BssNAI	GTATAC	1 cut(s)	620
Bst1107I	GTATAC	1 cut(s)	620
Bst2UI	CCWGG	3 cut(s)	252, 372, 699
Bst4CI	ACNGT	3 cut(s)	232, 436, 777
Bst6I	CTCTTC	3 cut(s)	333, 545, 1115
BstAPI	GCANNNNNTGC	1 cut(s)	901
BstAUI	TGTACA	2 cut(s)	442, 660
BstC8I	GCNNGC	1 cut(s)	857
BstDEI	CTNAG	5 cut(s)	87, 453, 1005, 1028, 1050
BstF5I	GGATG	4 cut(s)	874, 985, 1015, 1122
BstHHI	GCGC	1 cut(s)	876
BstKTI	GATC	4 cut(s)	81, 247, 697, 928
BstMAI	GTCTC	4 cut(s)	275, 489, 547, 1117
BstMBI	GATC	4 cut(s)	78, 244, 694, 925
BstMCI	CGRYCG	1 cut(s)	56
BstMWI	GCNNNNNNNGC	1 cut(s)	901
BstNI	CCWGG	3 cut(s)	252, 372, 699
BstNSI	RCATGY	3 cut(s)	449, 473, 803
BstSCI	CCNGG	3 cut(s)	250, 370, 697
BstSFI	CTRYAG	3 cut(s)	165, 853, 1178
BstV1I	GCAGC	3 cut(s)	179, 1164, 1192
BstV2I	GAAGAC	1 cut(s)	1080
BstX2I	RGATCY	2 cut(s)	244, 925
BstYI	RGATCY	2 cut(s)	244, 925
BstZ17I	GTATAC	1 cut(s)	620
BstZI	CGGCCG	1 cut(s)	53
Bsu36I	CCTNAGG	1 cut(s)	1028
BsuRI	GGCC	5 cut(s)	55, 97, 417, 717, 859
BtgZI	GCGATG	1 cut(s)	1030
BtrI	CACGTC	1 cut(s)	1041
BtsCI	GGATG	4 cut(s)	874, 985, 1015, 1122
BtsIMutI	CAGTG	2 cut(s)	432, 782
BveI	ACCTGC	3 cut(s)	209, 502, 909
Cac8I	GCNNGC	1 cut(s)	857
CciI	TCATGA	1 cut(s)	810
CciNI	GCGGCCGC	1 cut(s)	53
CfoI	GCGC	1 cut(s)	876
Cfr10I	RCCGGY	1 cut(s)	717
Cfr13I	GGNCC	3 cut(s)	25, 254, 701
CsiI	ACCWGGT	1 cut(s)	250
Csp6I	GTAC	7 cut(s)	228, 375, 443, 467, 500, 661, 850
CviQI	GTAC	7 cut(s)	228, 375, 443, 467, 500, 661, 850
DdeI	CTNAG	5 cut(s)	87, 453, 1005, 1028, 1050
DpnI	GATC	4 cut(s)	80, 246, 696, 927
DpnII	GATC	4 cut(s)	78, 244, 694, 925
EaeI	YGGCCR	2 cut(s)	53, 715
EagI	CGGCCG	1 cut(s)	53
Eam1104I	CTCTTC	3 cut(s)	333, 545, 1115
EarI	CTCTTC	3 cut(s)	333, 545, 1115
EclXI	CGGCCG	1 cut(s)	53
Eco147I	AGGCCT	1 cut(s)	97
Eco31I	GGTCTC	1 cut(s)	1117
Eco47I	GGWCC	3 cut(s)	25, 254, 701
Eco52I	CGGCCG	1 cut(s)	53
Eco57I	CTGAAG	2 cut(s)	762, 993
Eco81I	CCTNAGG	1 cut(s)	1028
EcoRII	CCWGG	3 cut(s)	250, 370, 697
Esp3I	CGTCTC	1 cut(s)	489
FauNDI	CATATG	2 cut(s)	732, 958
FbaI	TGATCA	1 cut(s)	78
FblI	GTMKAC	1 cut(s)	619
Fnu4HI	GCNGC	6 cut(s)	53, 56, 168, 794, 1178, 1181
FokI	GGATG	4 cut(s)	881, 972, 1022, 1129
Fsp4HI	GCNGC	6 cut(s)	53, 56, 168, 794, 1178, 1181
FspBI	CTAG	2 cut(s)	219, 930
GlaI	GCGC	1 cut(s)	875
GluI	GCNGC	6 cut(s)	53, 56, 168, 794, 1178, 1181
HaeIII	GGCC	5 cut(s)	55, 97, 417, 717, 859
HapII	CCGG	1 cut(s)	718
HhaI	GCGC	1 cut(s)	876
Hin6I	GCGC	1 cut(s)	874
HinP1I	GCGC	1 cut(s)	874
HincII	GTYRAC	1 cut(s)	490
HindII	GTYRAC	1 cut(s)	490
HpaII	CCGG	1 cut(s)	718
Hpy166II	GTNNAC	7 cut(s)	104, 490, 620, 663, 704, 773, 935
Hpy188I	TCNGA	6 cut(s)	292, 610, 727, 765, 889, 973
Hpy188III	TCNNGA	5 cut(s)	28, 316, 811, 1007, 1157
Hpy8I	GTNNAC	7 cut(s)	104, 490, 620, 663, 704, 773, 935
HpyAV	CCTTC	5 cut(s)	30, 61, 748, 760, 968
HpyCH4III	ACNGT	3 cut(s)	232, 436, 777
HpyCH4IV	ACGT	3 cut(s)	498, 669, 1040
HpyCH4V	TGCA	9 cut(s)	47, 134, 167, 260, 287, 569, 803, 855, 1180
HpyF10VI	GCNNNNNNNGC	1 cut(s)	901
HpyF3I	CTNAG	5 cut(s)	87, 453, 1005, 1028, 1050
HpySE526I	ACGT	3 cut(s)	498, 669, 1040
HspAI	GCGC	1 cut(s)	874
Ksp22I	TGATCA	1 cut(s)	78
Kzo9I	GATC	4 cut(s)	78, 244, 694, 925
Lsp1109I	GCAGC	3 cut(s)	179, 1164, 1192
LweI	GCATC	2 cut(s)	296, 994
MabI	ACCWGGT	1 cut(s)	250
MaeI	CTAG	2 cut(s)	219, 930
MaeII	ACGT	3 cut(s)	498, 669, 1040
MaeIII	GTNAC	2 cut(s)	952, 1012
MalI	GATC	4 cut(s)	80, 246, 696, 927
MboI	GATC	4 cut(s)	78, 244, 694, 925
MboII	GAAGA	5 cut(s)	207, 320, 562, 1085, 1132
MfeI	CAATTG	2 cut(s)	59, 804
MflI	RGATCY	2 cut(s)	244, 925
MhlI	GDGCHC	1 cut(s)	1058
MnlI	CCTC	7 cut(s)	108, 333, 336, 382, 415, 535, 1034
MroXI	GAANNNNTTC	1 cut(s)	529
MseI	TTAA	2 cut(s)	303, 365
MspI	CCGG	1 cut(s)	718
MspR9I	CCNGG	3 cut(s)	252, 372, 699
MunI	CAATTG	2 cut(s)	59, 804
MvaI	CCWGG	3 cut(s)	252, 372, 699
MwoI	GCNNNNNNNGC	1 cut(s)	901
NdeI	CATATG	2 cut(s)	732, 958
NdeII	GATC	4 cut(s)	78, 244, 694, 925
NlaIV	GGNNCC	1 cut(s)	246
NotI	GCGGCCGC	1 cut(s)	53
NspI	RCATGY	3 cut(s)	449, 473, 803
PagI	TCATGA	1 cut(s)	810
PaqCI	CACCTGC	1 cut(s)	209
PceI	AGGCCT	1 cut(s)	97
PciI	ACATGT	1 cut(s)	469
PdmI	GAANNNNTTC	1 cut(s)	529
PkrI	GCNGC	6 cut(s)	54, 57, 169, 795, 1179, 1182
PscI	ACATGT	1 cut(s)	469
Psp6I	CCWGG	3 cut(s)	250, 370, 697
PspGI	CCWGG	3 cut(s)	250, 370, 697
PspN4I	GGNNCC	1 cut(s)	246
PspPI	GGNCC	3 cut(s)	25, 254, 701
PstI	CTGCAG	3 cut(s)	169, 857, 1182
PsuI	RGATCY	2 cut(s)	244, 925
RsaI	GTAC	7 cut(s)	229, 376, 444, 468, 501, 662, 851
RsaNI	GTAC	7 cut(s)	228, 375, 443, 467, 500, 661, 850
SaqAI	TTAA	2 cut(s)	303, 365
SatI	GCNGC	6 cut(s)	53, 56, 168, 794, 1178, 1181
Sau3AI	GATC	4 cut(s)	78, 244, 694, 925
Sau96I	GGNCC	3 cut(s)	25, 254, 701
ScrFI	CCNGG	3 cut(s)	252, 372, 699
SduI	GDGCHC	1 cut(s)	1058
SexAI	ACCWGGT	1 cut(s)	250
SfaNI	GCATC	2 cut(s)	296, 994
SfcI	CTRYAG	3 cut(s)	165, 853, 1178
SinI	GGWCC	3 cut(s)	25, 254, 701
SmlI	CTYRAG	1 cut(s)	314
SmoI	CTYRAG	1 cut(s)	314
SseBI	AGGCCT	1 cut(s)	97
SsiI	CCGC	3 cut(s)	52, 56, 793
SspMI	CTAG	2 cut(s)	219, 930
StuI	AGGCCT	1 cut(s)	97
StyD4I	CCNGG	3 cut(s)	250, 370, 697
TaaI	ACNGT	3 cut(s)	232, 436, 777
TaiI	ACGT	3 cut(s)	501, 672, 1043
TaqI	TCGA	1 cut(s)	636
TaqII	GACCGA	1 cut(s)	13
TatI	WGTACW	5 cut(s)	227, 442, 466, 660, 849
TauI	GCSGC	3 cut(s)	55, 58, 796
Tru1I	TTAA	2 cut(s)	303, 365
Tru9I	TTAA	2 cut(s)	303, 365
TscAI	CASTG	2 cut(s)	439, 782
TseI	GCWGC	3 cut(s)	167, 1177, 1180
TspDTI	ATGAA	6 cut(s)	47, 80, 346, 803, 935, 1133
TspRI	CASTG	2 cut(s)	439, 782
VpaK11BI	GGWCC	3 cut(s)	25, 254, 701
XapI	RAATTY	4 cut(s)	309, 403, 428, 527
XceI	RCATGY	3 cut(s)	449, 473, 803
XmiI	GTMKAC	1 cut(s)	619
XmnI	GAANNNNTTC	1 cut(s)	529
XspI	CTAG	2 cut(s)	219, 930

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.