Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0004591

Physical Location & Seq

Genomic Coordinates Reverse (-)

53957834 .. 53963019

Gene Structure 5186 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0393900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2154 bp

ATGGGTGCTGCTTCTGCTGGGTACCCATTTGGAGTTACTTCTCATTGCTATGGAAAGATTGGGGCTTTTTCTCATAAAGTCCAGTTATTTGGAGCTAATTTTCCACCTCGTGTGGAATTTCCAAGAACCAACTTGTACCCAAGTTCTGCTTCCTCCATATCATCCAAGGAAATAGTCACTCAAATATGTTCTCTACCTGATAGTGGTGAATTCTTCCCAGAAGAAGTCTCGACACCCATTCTCGATTCAGTTGAAAATCCTATGCACCTGAAGAACTTGTCCCTTAAAGAACTGAAGCAATTATCTGATGAAATCCGTTTAGAGTTATCATCTATAATGCTGAAAACACGGAAGTCTTTTAAAGCCAGTTTGGCAGTAGCGGAGTTGACAATTGCAATACACCATGTTTTCCATGCACCAGTTGATAAGATACTATGGGATGCTGTAGAACAAACATATGCTCATAAAATTCTAACAGGACGGCGGGCCCTCATACATACTCTGCAAAGAAATGGTCTTTCTGGTTCTACATCACATCCTGAGAGTGAATATGATCCATTTGGGGCAGGGCATGGGTGCAACAGTGTTTCGGCTGGACTTGGGATGGCAATTGCACGGGATTTAAAAGGGAAACGAGAGCGTATTGTTACAGTCATCAGCAATGGTACAACTATGGCTGGTCAAGTCTATGAGGCGATGGGTAATGCAGGGTATTTTGACTCGAATATGGTAGTTATTTTAAATGACAGTAGGCATTCTTTACACCCAAAGATTGAAGAGGGCCCCAAGACGTCTATTAGTGCTCTATCCAGTACCCTAAGCAAGCTCCAGTCAAGTAAATCCTTTCGGAAATTTAGAGAAGTTGCTAAGGATGTTACTAAAAGAATTGGTATGCATGAATTGGCAGCTAAAGTTGATGAGTATGCACGTGGTATGGTGGGTCCACCAGGAGCAACTCTTTTTGAAGAGCTTGGATTGTATTACATTGGTCCTGTTGATGGACACAACATTGAAGACCTGATTTGTGTTCTACAACAAGTGGCATCTTTGAATTCAATGGGTCCTGTTTTGGTTCATGTTATAACAGAAGAAAATCGGGGAGTGGAAAACAACCCAAAGCTTGAGGGGGAATACAAGCAGCAGGAAGGTTTAAGTAGTTCTGATGATTTAGCGTCCAGAATGCACCGTAGAACTTATAGCGACTGCTTTGTGGAGGCTTTAGTTATGGAGGCAGAGCAGGACAAAGATATCGTGACTGTTCACGCTGGGATGCACATGGAAGCATCATTTGAACTATTCCGTGACCGATTTCCTGATAAGTTTTTCGATGTGGGAATGGCTGAGCAACATGCAGTTACTTTTTCTGCTGGTTTGTCACGTGGAGGGCTGAAGCCATTTTGCATAATCCCTTCTGCATTTCTACAAAGAGCTTATGATCAGGTAGTTCATGATGTAGATCGACAAAGAATTCCAGTGCGTTTTGCCATAACAAGTGCAGGCTTGGTAGGATCTGATGGTCCCATGCAGTGTGGGGCATTTGATATAACATTTATGTCATGCTTACCCAACATGATTGTCATGGCACCATCCAATGAGGATGAGCTTGCCAACATGGTGGCCACTGCAGCCCGCATTGATGATCGTCCAGTTTGCTTCCGATATCCCAGGGGTGCCATTGTTGGGATGGATCATTCAATTTGCAGTGGGATGCCCATCGAGATTGGAAAAGGGAAAGTTCTTGCAGAAGGTAAAGATGTGGCTTTGCTTGGATATGGATCAATGGTTCAGAACTGCCTTAAGGCTCGGTCTCTTCTTTCGAAGCTTGGCATTGAGGTAACCGTTGCTGATGCGAGGTTCTGCAAGCCATTAGATATTAAGCTTCTTAGGCAGCTTTGTGAAAACCATTCATTTCTGATCACGGTTGAGGAAGGGTCTATTGGAGGATTTGGATCCCATGTTGCACAGTTCTTTGCGCTCGATGGACAGCTTGATGGAAAAATTAAGTGGCGACCAATTGTTTTACCAGACAACTACATTGAGCATGCATCCCCAAGTGAACAACTAGCTATTGCTGGGCTGACTGGACACCACATAGCTGCAACAGCGTTAAGTCTGCTTGGCCGAAATCGTGAAGCCCTCCACTTAATGTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Branch

Protein Analysis

717

Amino Acids

78.27

Weight (kDa)

6.2

Isoelectric Point (pI)

38.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DXP_synthase_N	PF13292	81 - 362	1.5e-76	1-deoxy-D-xylulose-5-phosphate synthase
Transket_pyr	PF02779	398 - 558	4e-33	Transketolase, pyrimidine binding domain
Transketolase_C	PF02780	575 - 698	6.1e-31	Transketolase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004591)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31350 AT4G31350 AT4G31350 AT4G31350
fragaria_vesca	FvH4_2g30700 FvH4_2g30700 FvH4_2g30700 FvH4_2g30700 FvH4_2g30700
malus_domestica	MD00G1173000.v1.1 MD08G1134100.v1.1 MD15G1109800.v1.1
prunus_persica	Prupe.7G025400_v2.0.a1
pyrus_communis	pycom08g11290 pycom15g09990
rosa_chinensis	RchiOBHm_Chr6g0312191
rosa_laevigata	RLG00000010344
rosa_multiflora	Rmu_co8277175.1_g000001 Rmu_sc0010924.1_g000007
rosa_roxburghii	Rroxscaffold_7G00156970
rosa_rugosa	Rorug06G0393700 Rorug06G0393800 Rorug06G0393800 Rorug06G0393900 Rorug06G0394000 Rorug06G0394000
rosa_samantha	Rh6AG510700 Rh6BG521800 Rh6CG527700 Rh6DG513100
rosa_wichuraiana	Rw6G044420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1082
AatII	GACGTC	1 cut(s)	794
Acc65I	GGTACC	1 cut(s)	21
AccB1I	GGYRCC	3 cut(s)	21, 1582, 1670
AciI	CCGC	3 cut(s)	380, 484, 1630
AclWI	GGATC	6 cut(s)	548, 1516, 1695, 1783, 1944, 1957
AcoI	YGGCCR	2 cut(s)	1617, 2119
AcsI	RAATTY	6 cut(s)	116, 209, 468, 851, 1051, 1467
AcuI	CTGAAG	3 cut(s)	290, 314, 1409
AcvI	CACGTG	2 cut(s)	929, 1379
AcyI	GRCGYC	1 cut(s)	791
AdeI	CACNNNGTG	1 cut(s)	110
AfaI	GTAC	4 cut(s)	23, 137, 667, 814
AfiI	CCNNNNNNNGG	3 cut(s)	203, 998, 1680
AflII	CTTAAG	1 cut(s)	1796
AgsI	TTSAA	8 cut(s)	254, 776, 965, 1013, 1051, 1056, 1292, 1695
AjnI	CCWGG	2 cut(s)	946, 1664
AjuI	GAANNNNNNNTTGG	4 cut(s)	133, 165, 1920, 1952
AloI	GAACNNNNNNTCC	2 cut(s)	1767, 1799
Alw21I	GWGCWC	1 cut(s)	805
Alw26I	GTCTC	2 cut(s)	232, 1812
AlwI	GGATC	6 cut(s)	548, 1516, 1695, 1783, 1944, 1957
AoxI	GGCC	4 cut(s)	486, 781, 1617, 2119
ApaI	GGGCCC	2 cut(s)	490, 785
ApeKI	GCWGC	6 cut(s)	8, 905, 1138, 1625, 1888, 2096
ApoI	RAATTY	6 cut(s)	116, 209, 468, 851, 1051, 1467
ArsI	GACNNNNNNTTYG	2 cut(s)	499, 531
Asp718I	GGTACC	1 cut(s)	21
AspLEI	GCGC	1 cut(s)	1975
AspS9I	GGNCC	8 cut(s)	486, 487, 781, 782, 941, 989, 1061, 1517
AsuHPI	GGTGA	1 cut(s)	218
AsuII	TTCGAA	1 cut(s)	1817
AvaII	GGWCC	4 cut(s)	941, 989, 1061, 1517
BaeGI	GKGCMC	2 cut(s)	490, 785
BalI	TGGCCA	1 cut(s)	1619
BamHI	GGATCC	1 cut(s)	1949
BanI	GGYRCC	3 cut(s)	21, 1582, 1670
BanII	GRGCYC	2 cut(s)	490, 785
BauI	CACGAG	1 cut(s)	108
BbrPI	CACGTG	2 cut(s)	929, 1379
BbsI	GAAGAC	1 cut(s)	1020
Bbv12I	GWGCWC	1 cut(s)	805
BbvI	GCAGC	5 cut(s)	917, 1150, 1637, 1900, 2083
BccI	CCATC	9 cut(s)	598, 691, 992, 1508, 1594, 1678, 1721, 1973, 1985
BceAI	ACGGC	1 cut(s)	497
BciT130I	CCWGG	2 cut(s)	948, 1666
BclI	TGATCA	2 cut(s)	1435, 1914
BcoDI	GTCTC	2 cut(s)	232, 1812
BfaI	CTAG	1 cut(s)	2063
BfmI	CTRYAG	2 cut(s)	444, 1623
BfrI	CTTAAG	1 cut(s)	1796
BglI	GCCNNNNNGGC	1 cut(s)	371
BisI	GCNGC	6 cut(s)	9, 906, 1139, 1626, 1889, 2097
BlpI	GCTNAGC	1 cut(s)	1341
BlsI	GCNGC	6 cut(s)	10, 907, 1140, 1627, 1890, 2098
Bme1390I	CCNGG	2 cut(s)	948, 1666
Bme18I	GGWCC	4 cut(s)	941, 989, 1061, 1517
BmgT120I	GGNCC	8 cut(s)	486, 487, 781, 782, 941, 989, 1061, 1517
BmrFI	CCNGG	2 cut(s)	948, 1666
BmsI	GCATC	7 cut(s)	430, 1052, 1260, 1292, 1698, 1837, 2054
BpiI	GAAGAC	1 cut(s)	1020
BpmI	CTGGAG	1 cut(s)	812
Bpu10I	CCTNAGC	2 cut(s)	818, 867
Bpu1102I	GCTNAGC	1 cut(s)	1341
Bpu14I	TTCGAA	1 cut(s)	1817
BpuEI	CTTGAG	1 cut(s)	1142
BsaAI	YACGTR	2 cut(s)	929, 1379
BsaBI	GATNNNNATC	4 cut(s)	1455, 1712, 1774, 1948
BsaHI	GRCGYC	1 cut(s)	791
BsaI	GGTCTC	1 cut(s)	1812
BsaJI	CCNNGG	3 cut(s)	165, 1664, 1665
Bsc4I	CCNNNNNNNGG	3 cut(s)	203, 998, 1680
Bse1I	ACTGG	8 cut(s)	82, 366, 419, 810, 829, 1472, 1646, 2086
Bse3DI	GCAATG	2 cut(s)	43, 667
Bse8I	GATNNNNATC	4 cut(s)	1455, 1712, 1774, 1948
BseBI	CCWGG	2 cut(s)	948, 1666
BseDI	CCNNGG	3 cut(s)	165, 1664, 1665
BseJI	GATNNNNATC	4 cut(s)	1455, 1712, 1774, 1948
BseLI	CCNNNNNNNGG	3 cut(s)	203, 998, 1680
BseMI	GCAATG	2 cut(s)	43, 667
BseMII	CTCAG	2 cut(s)	531, 1332
BseNI	ACTGG	8 cut(s)	82, 366, 419, 810, 829, 1472, 1646, 2086
BseSI	GKGCMC	2 cut(s)	490, 785
BseXI	GCAGC	5 cut(s)	917, 1150, 1637, 1900, 2083
BseYI	CCCAGC	3 cut(s)	17, 1265, 2072
BsgI	GTGCAG	1 cut(s)	1515
BshFI	GGCC	4 cut(s)	488, 783, 1619, 2121
BshNI	GGYRCC	3 cut(s)	21, 1582, 1670
BsiHKAI	GWGCWC	1 cut(s)	805
BslFI	GGGAC	2 cut(s)	265, 1503
BslI	CCNNNNNNNGG	3 cut(s)	203, 998, 1680
BsmAI	GTCTC	2 cut(s)	232, 1812
BsmFI	GGGAC	2 cut(s)	265, 1503
BsmI	GAATGC	2 cut(s)	754, 1185
BsnI	GGCC	4 cut(s)	488, 783, 1619, 2121
Bso31I	GGTCTC	1 cut(s)	1812
Bsp119I	TTCGAA	1 cut(s)	1817
Bsp120I	GGGCCC	2 cut(s)	486, 781
Bsp1286I	GDGCHC	3 cut(s)	490, 785, 805
Bsp143I	GATC	9 cut(s)	553, 1435, 1456, 1508, 1639, 1687, 1775, 1914, 1949
Bsp1720I	GCTNAGC	1 cut(s)	1341
BspACI	CCGC	3 cut(s)	380, 484, 1630
BspANI	GGCC	4 cut(s)	488, 783, 1619, 2121
BspCNI	CTCAG	2 cut(s)	532, 1333
BspHI	TCATGA	1 cut(s)	1447
BspMAI	CTGCAG	1 cut(s)	1627
BspPI	GGATC	6 cut(s)	548, 1516, 1695, 1783, 1944, 1957
BspQI	GCTCTTC	1 cut(s)	960
BspT104I	TTCGAA	1 cut(s)	1817
BspT107I	GGYRCC	3 cut(s)	21, 1582, 1670
BspTI	CTTAAG	1 cut(s)	1796
BspTNI	GGTCTC	1 cut(s)	1812
BsrDI	GCAATG	2 cut(s)	43, 667
BsrI	ACTGG	8 cut(s)	82, 366, 419, 810, 829, 1472, 1646, 2086
BssECI	CCNNGG	3 cut(s)	165, 1664, 1665
BssMI	GATC	9 cut(s)	553, 1435, 1456, 1508, 1639, 1687, 1775, 1914, 1949
BssNI	GRCGYC	1 cut(s)	791
BssSI	CACGAG	1 cut(s)	108
BssT1I	CCWWGG	1 cut(s)	165
Bst2BI	CACGAG	1 cut(s)	108
Bst2UI	CCWGG	2 cut(s)	948, 1666
Bst4CI	ACNGT	8 cut(s)	584, 652, 749, 1187, 1258, 1840, 1921, 1965
Bst6I	CTCTTC	3 cut(s)	771, 960, 1815
BstACI	GRCGYC	1 cut(s)	791
BstAFI	CTTAAG	1 cut(s)	1796
BstBAI	YACGTR	2 cut(s)	929, 1379
BstBI	TTCGAA	1 cut(s)	1817
BstC8I	GCNNGC	7 cut(s)	486, 824, 1498, 1605, 1630, 1862, 2043
BstDEI	CTNAG	5 cut(s)	540, 818, 867, 1341, 1883
BstEII	GGTNACC	1 cut(s)	1834
BstHHI	GCGC	1 cut(s)	1975
BstKTI	GATC	9 cut(s)	556, 1438, 1459, 1511, 1642, 1690, 1778, 1917, 1952
BstMAI	GTCTC	2 cut(s)	232, 1812
BstMBI	GATC	9 cut(s)	553, 1435, 1456, 1508, 1639, 1687, 1775, 1914, 1949
BstMWI	GCNNNNNNNGC	5 cut(s)	14, 371, 1625, 1885, 2102
BstNI	CCWGG	2 cut(s)	948, 1666
BstNSI	RCATGY	2 cut(s)	1352, 2045
BstPI	GGTNACC	1 cut(s)	1834
BstSCI	CCNGG	2 cut(s)	946, 1664
BstSFI	CTRYAG	2 cut(s)	444, 1623
BstSLI	GKGCMC	2 cut(s)	490, 785
BstV1I	GCAGC	5 cut(s)	917, 1150, 1637, 1900, 2083
BstV2I	GAAGAC	1 cut(s)	1020
BstX2I	RGATCY	2 cut(s)	1508, 1949
BstXI	CCANNNNNNTGG	2 cut(s)	89, 1615
BstYI	RGATCY	2 cut(s)	1508, 1949
BsuRI	GGCC	4 cut(s)	488, 783, 1619, 2121
BtgZI	GCGATG	1 cut(s)	710
BtsI	GCAGTG	3 cut(s)	1532, 1620, 1708
BtsIMutI	CAGTG	5 cut(s)	589, 1479, 1532, 1620, 1708
Cac8I	GCNNGC	7 cut(s)	486, 824, 1498, 1605, 1630, 1862, 2043
CciI	TCATGA	1 cut(s)	1447
CfoI	GCGC	1 cut(s)	1975
Cfr13I	GGNCC	8 cut(s)	486, 487, 781, 782, 941, 989, 1061, 1517
CseI	GACGC	1 cut(s)	1161
Csp6I	GTAC	4 cut(s)	22, 136, 666, 813
CviQI	GTAC	4 cut(s)	22, 136, 666, 813
DdeI	CTNAG	5 cut(s)	540, 818, 867, 1341, 1883
DpnI	GATC	9 cut(s)	555, 1437, 1458, 1510, 1641, 1689, 1777, 1916, 1951
DpnII	GATC	9 cut(s)	553, 1435, 1456, 1508, 1639, 1687, 1775, 1914, 1949
DraI	TTTAAA	3 cut(s)	361, 624, 741
DraIII	CACNNNGTG	1 cut(s)	110
EaeI	YGGCCR	2 cut(s)	1617, 2119
Eam1104I	CTCTTC	3 cut(s)	771, 960, 1815
EarI	CTCTTC	3 cut(s)	771, 960, 1815
Eco130I	CCWWGG	1 cut(s)	165
Eco24I	GRGCYC	2 cut(s)	490, 785
Eco31I	GGTCTC	1 cut(s)	1812
Eco32I	GATATC	2 cut(s)	1249, 1661
Eco47I	GGWCC	4 cut(s)	941, 989, 1061, 1517
Eco57I	CTGAAG	3 cut(s)	290, 314, 1409
Eco72I	CACGTG	2 cut(s)	929, 1379
Eco91I	GGTNACC	1 cut(s)	1834
EcoO109I	RGGNCCY	4 cut(s)	487, 781, 782, 1061
EcoO65I	GGTNACC	1 cut(s)	1834
EcoRI	GAATTC	3 cut(s)	209, 1051, 1467
EcoRII	CCWGG	2 cut(s)	946, 1664
EcoRV	GATATC	2 cut(s)	1249, 1661
EcoT14I	CCWWGG	1 cut(s)	165
EcoT22I	ATGCAT	2 cut(s)	897, 2047
EcoT38I	GRGCYC	2 cut(s)	490, 785
ErhI	CCWWGG	1 cut(s)	165
FalI	AAGNNNNNCTT	2 cut(s)	133, 165
FaqI	GGGAC	2 cut(s)	265, 1503
FauI	CCCGC	2 cut(s)	477, 1637
FauNDI	CATATG	1 cut(s)	457
FbaI	TGATCA	2 cut(s)	1435, 1914
Fnu4HI	GCNGC	6 cut(s)	9, 906, 1139, 1626, 1889, 2097
FriOI	GRGCYC	2 cut(s)	490, 785
Fsp4HI	GCNGC	6 cut(s)	9, 906, 1139, 1626, 1889, 2097
FspBI	CTAG	1 cut(s)	2063
GlaI	GCGC	1 cut(s)	1974
GluI	GCNGC	6 cut(s)	9, 906, 1139, 1626, 1889, 2097
GsaI	CCCAGC	3 cut(s)	21, 1269, 2076
GsuI	CTGGAG	1 cut(s)	812
HaeIII	GGCC	4 cut(s)	488, 783, 1619, 2121
HgaI	GACGC	1 cut(s)	1161
HhaI	GCGC	1 cut(s)	1975
Hin1I	GRCGYC	1 cut(s)	791
Hin6I	GCGC	1 cut(s)	1973
HinP1I	GCGC	1 cut(s)	1973
HincII	GTYRAC	1 cut(s)	387
HindII	GTYRAC	1 cut(s)	387
HindIII	AAGCTT	3 cut(s)	1118, 1820, 1877
HinfI	GANTC	2 cut(s)	245, 719
HphI	GGTGA	1 cut(s)	218
Hpy166II	GTNNAC	4 cut(s)	387, 944, 1261, 2057
Hpy188I	TCNGA	7 cut(s)	307, 849, 1162, 1513, 1658, 1788, 1914
Hpy188III	TCNNGA	9 cut(s)	229, 242, 539, 1176, 1252, 1313, 1448, 1717, 2129
Hpy8I	GTNNAC	4 cut(s)	387, 944, 1261, 2057
HpyAV	CCTTC	4 cut(s)	1139, 1419, 1739, 1922
HpyCH4III	ACNGT	8 cut(s)	584, 652, 749, 1187, 1258, 1840, 1921, 1965
HpyCH4IV	ACGT	3 cut(s)	791, 928, 1378
HpyF10VI	GCNNNNNNNGC	5 cut(s)	14, 371, 1625, 1885, 2102
HpyF3I	CTNAG	5 cut(s)	540, 818, 867, 1341, 1883
HpySE526I	ACGT	3 cut(s)	791, 928, 1378
Hsp92I	GRCGYC	1 cut(s)	791
HspAI	GCGC	1 cut(s)	1973
KpnI	GGTACC	1 cut(s)	25
Ksp22I	TGATCA	2 cut(s)	1435, 1914
Kzo9I	GATC	9 cut(s)	553, 1435, 1456, 1508, 1639, 1687, 1775, 1914, 1949
LguI	GCTCTTC	1 cut(s)	960
LmnI	GCTCC	3 cut(s)	92, 831, 950
Lsp1109I	GCAGC	5 cut(s)	917, 1150, 1637, 1900, 2083
LweI	GCATC	7 cut(s)	430, 1052, 1260, 1292, 1698, 1837, 2054
MaeI	CTAG	1 cut(s)	2063
MaeII	ACGT	3 cut(s)	791, 928, 1378
MaeIII	GTNAC	9 cut(s)	34, 175, 646, 874, 1252, 1301, 1354, 1374, 1834
MalI	GATC	9 cut(s)	555, 1437, 1458, 1510, 1641, 1689, 1777, 1916, 1951
MboI	GATC	9 cut(s)	553, 1435, 1456, 1508, 1639, 1687, 1775, 1914, 1949
MboII	GAAGA	8 cut(s)	205, 233, 283, 788, 977, 1025, 1100, 1802
MfeI	CAATTG	3 cut(s)	390, 609, 2013
MflI	RGATCY	2 cut(s)	1508, 1949
MhlI	GDGCHC	3 cut(s)	490, 785, 805
MlsI	TGGCCA	1 cut(s)	1619
MluNI	TGGCCA	1 cut(s)	1619
MlyI	GAGTC	1 cut(s)	713
Mox20I	TGGCCA	1 cut(s)	1619
Mph1103I	ATGCAT	2 cut(s)	897, 2047
MscI	TGGCCA	1 cut(s)	1619
MslI	CAYNNNNRTG	1 cut(s)	48
Msp20I	TGGCCA	1 cut(s)	1619
MspCI	CTTAAG	1 cut(s)	1796
MspR9I	CCNGG	2 cut(s)	948, 1666
MunI	CAATTG	3 cut(s)	390, 609, 2013
Mva1269I	GAATGC	2 cut(s)	754, 1185
MvaI	CCWGG	2 cut(s)	948, 1666
MwoI	GCNNNNNNNGC	5 cut(s)	14, 371, 1625, 1885, 2102
NdeI	CATATG	1 cut(s)	457
NdeII	GATC	9 cut(s)	553, 1435, 1456, 1508, 1639, 1687, 1775, 1914, 1949
NmuCI	GTSAC	4 cut(s)	175, 1252, 1301, 1374
NsiI	ATGCAT	2 cut(s)	897, 2047
NspI	RCATGY	2 cut(s)	1352, 2045
NspV	TTCGAA	1 cut(s)	1817
PaeI	GCATGC	1 cut(s)	2045
PagI	TCATGA	1 cut(s)	1447
PasI	CCCWGGG	1 cut(s)	1665
PciSI	GCTCTTC	1 cut(s)	960
PctI	GAATGC	2 cut(s)	754, 1185
PfeI	GAWTC	1 cut(s)	245
PkrI	GCNGC	6 cut(s)	10, 907, 1140, 1627, 1890, 2098
PleI	GAGTC	1 cut(s)	713
PmaCI	CACGTG	2 cut(s)	929, 1379
PmlI	CACGTG	2 cut(s)	929, 1379
PpsI	GAGTC	1 cut(s)	713
Ppu21I	YACGTR	2 cut(s)	929, 1379
PpuMI	RGGWCCY	1 cut(s)	1061
PsiI	TTATAA	1 cut(s)	1082
Psp5II	RGGWCCY	1 cut(s)	1061
Psp6I	CCWGG	2 cut(s)	946, 1664
PspCI	CACGTG	2 cut(s)	929, 1379
PspEI	GGTNACC	1 cut(s)	1834
PspFI	CCCAGC	3 cut(s)	17, 1265, 2072
PspGI	CCWGG	2 cut(s)	946, 1664
PspOMI	GGGCCC	2 cut(s)	486, 781
PspPI	GGNCC	8 cut(s)	486, 487, 781, 782, 941, 989, 1061, 1517
PspPPI	RGGWCCY	1 cut(s)	1061
PstI	CTGCAG	1 cut(s)	1627
PsuI	RGATCY	2 cut(s)	1508, 1949
RsaI	GTAC	4 cut(s)	23, 137, 667, 814
RsaNI	GTAC	4 cut(s)	22, 136, 666, 813
RseI	CAYNNNNRTG	1 cut(s)	48
SapI	GCTCTTC	1 cut(s)	960
SatI	GCNGC	6 cut(s)	9, 906, 1139, 1626, 1889, 2097
Sau3AI	GATC	9 cut(s)	553, 1435, 1456, 1508, 1639, 1687, 1775, 1914, 1949
Sau96I	GGNCC	8 cut(s)	486, 487, 781, 782, 941, 989, 1061, 1517
SchI	GAGTC	1 cut(s)	713
ScrFI	CCNGG	2 cut(s)	948, 1666
SduI	GDGCHC	3 cut(s)	490, 785, 805
SfaNI	GCATC	7 cut(s)	430, 1052, 1260, 1292, 1698, 1837, 2054
SfcI	CTRYAG	2 cut(s)	444, 1623
SfuI	TTCGAA	1 cut(s)	1817
SinI	GGWCC	4 cut(s)	941, 989, 1061, 1517
SmiMI	CAYNNNNRTG	1 cut(s)	48
SmlI	CTYRAG	2 cut(s)	1121, 1796
SmoI	CTYRAG	2 cut(s)	1121, 1796
SphI	GCATGC	1 cut(s)	2045
SsiI	CCGC	3 cut(s)	380, 484, 1630
SspMI	CTAG	1 cut(s)	2063
StyD4I	CCNGG	2 cut(s)	946, 1664
StyI	CCWWGG	1 cut(s)	165
TaaI	ACNGT	8 cut(s)	584, 652, 749, 1187, 1258, 1840, 1921, 1965
TaiI	ACGT	3 cut(s)	794, 931, 1381
TaqI	TCGA	8 cut(s)	230, 243, 722, 1326, 1459, 1716, 1817, 1977
TaqII	GACCGA	2 cut(s)	1320, 1794
TfiI	GAWTC	1 cut(s)	245
TscAI	CASTG	5 cut(s)	589, 1479, 1532, 1627, 1708
TseFI	GTSAC	4 cut(s)	175, 1252, 1301, 1374
TseI	GCWGC	6 cut(s)	8, 905, 1138, 1625, 1888, 2096
Tsp45I	GTSAC	4 cut(s)	175, 1252, 1301, 1374
TspDTI	ATGAA	5 cut(s)	324, 912, 1064, 1436, 1896
TspGWI	ACGGA	3 cut(s)	305, 364, 1289
TspRI	CASTG	5 cut(s)	589, 1479, 1532, 1627, 1708
Vha464I	CTTAAG	1 cut(s)	1796
VpaK11BI	GGWCC	4 cut(s)	941, 989, 1061, 1517
XapI	RAATTY	6 cut(s)	116, 209, 468, 851, 1051, 1467
XceI	RCATGY	2 cut(s)	1352, 2045
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1681
XspI	CTAG	1 cut(s)	2063
ZraI	GACGTC	1 cut(s)	792
Zsp2I	ATGCAT	2 cut(s)	897, 2047

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.