Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0006449

Physical Location & Seq

Genomic Coordinates Reverse (-)

8969523 .. 8970831

Gene Structure 1309 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G051700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1053 bp

ATGACTAAATCGAATTCGTCATCAGTTGGCAGATGCCTTTCTCTGATTTCTATAGTACTTCTACTTGGGCAGCTGGTGGTGGCTAGCTTGGCAACAAAACAACACACAGGTGCTCCAGTTGGTGTATGTAATGGAATGGTTGGCGATGACCTACCACCCCAAGCGGAAGTTGTTGCCCTCTACAAGACAAATAACATCCCAAGAATGCGACTTTATGATCCAAACCCAGCCGCTCTAGAAGCCCTTCGAGGCTCCAATATCAAGCTCTTGCTAGGCGTACCAAATGAAAACCTTCAATACATTGCCTTAAGCCAAGCCAACGCAAATGCATGGGTCCAAAACAATGTGAGAAACTATGCCAATGTGAAATTCAAGTACATTGCGGTAGGAAATGAAGTCAAGCCTTCAGACTCCTTTGCACAGTTTCTCGTCCCAGCCATGCGAAATATTCAAGAGGCAATTTCTCTTGCTGGTCTTGCAAAGAAAATTAAAGTTTCGACAGCCATCGACACCGGAGTACTTGGAGAGACCTTTCCTCCTTCGATAGGCTCATTCAAGTCTGAATATAACGCCCTTTTATATCCCATCATCCGCTTCCTAGTGAGCCACCAATCGCCATTGCTTGTTAACTTGTACCCTTATTTTGCTTACAGTGGCAACACTCAAGACATTCGTCTTGACTATGCTCTTTTCACAGCTCCATCAGTTGTGGTACAAGATGGGAACTTTGGTTACCGAAATCTTTTCGATGCCATGTTAGATGGTGTTTATGCTGCTCTTGAGAAGGCTGGTGGAGGGTCTTTGAAAGTTGTTATATCAGAGACTGGTTGGCCATCAGCTGCTGGAACAGCCACAACAATTGATAATGCAAGGACTTTTATATCAAATTTGATTCAACATGTGAAGGAAGGGACTCCAAGGAGGCCAGGAAGGCCCATAGAAACTTACATCTTTGCCATGTTTGATGAGAATAGAAAGACCCCCGAGCTTGAGAAACATTGGGGGCTCTTCTCCCCAACAAAACAGCCTAAATACCAAATCAGTTTCAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_17

Protein Analysis

351

Amino Acids

38.22

Weight (kDa)

9.12

Isoelectric Point (pI)

34.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006449)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G57240 AT3G57270
malus_domestica	MD14G1078700.v1.1 MD14G1079900.v1.1 MD14G1080000.v1.1 MD14G1080100.v1.1
prunus_persica	Prupe.7G051700_v2.0.a1 Prupe.7G051800_v2.0.a1 Prupe.7G051900_v2.0.a1 Prupe.7G052000_v2.0.a1
pyrus_communis	pycom12g07070 pycom14g06760 pycom14g06890 pycom14g06920 pycom14g06930 pycom14g06950
rosa_chinensis	RchiOBHm_Chr7g0178171
rosa_laevigata	RLG00000005465
rosa_multiflora	Rmu_sc0007855.1_g000007
rosa_roxburghii	Rroxscaffold_3G00275110
rosa_rugosa	Rorug06G0413800
rosa_samantha	Rh7AG013500 Rh7BG013400 Rh7CG013300 Rh7DG013600
rosa_wichuraiana	Rw7G001070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	233
AciI	CCGC	4 cut(s)	164, 231, 383, 592
AclWI	GGATC	1 cut(s)	212
AcoI	YGGCCR	1 cut(s)	830
AcsI	RAATTY	3 cut(s)	13, 368, 886
AcuI	CTGAAG	1 cut(s)	390
AfaI	GTAC	6 cut(s)	57, 279, 377, 519, 635, 714
AfiI	CCNNNNNNNGG	1 cut(s)	545
AflII	CTTAAG	1 cut(s)	307
AflIII	ACRYGT	1 cut(s)	898
AgsI	TTSAA	7 cut(s)	296, 373, 452, 556, 805, 896, 1048
AjnI	CCWGG	1 cut(s)	925
AjuI	GAANNNNNNNTTGG	2 cut(s)	353, 385
AleI	CACNNNNGTG	1 cut(s)	108
AluBI	AGCT	6 cut(s)	73, 87, 265, 698, 839, 988
AluI	AGCT	6 cut(s)	73, 87, 265, 698, 839, 988
Alw21I	GWGCWC	1 cut(s)	115
Alw26I	GTCTC	2 cut(s)	521, 815
AlwI	GGATC	1 cut(s)	212
AlwNI	CAGNNNCTG	2 cut(s)	824, 842
Ama87I	CYCGRG	1 cut(s)	983
AoxI	GGCC	3 cut(s)	830, 923, 932
ApeKI	GCWGC	3 cut(s)	70, 773, 839
ApoI	RAATTY	3 cut(s)	13, 368, 886
Asp700I	GAANNNNTTC	2 cut(s)	243, 291
AspS9I	GGNCC	2 cut(s)	334, 933
AsuNHI	GCTAGC	1 cut(s)	83
AvaI	CYCGRG	1 cut(s)	983
AvaII	GGWCC	1 cut(s)	334
BalI	TGGCCA	1 cut(s)	832
BanII	GRGCYC	1 cut(s)	1008
Bbv12I	GWGCWC	1 cut(s)	115
BbvI	GCAGC	3 cut(s)	82, 760, 826
BccI	CCATC	6 cut(s)	512, 593, 709, 713, 755, 841
BciT130I	CCWGG	1 cut(s)	927
BcoDI	GTCTC	2 cut(s)	521, 815
BfaI	CTAG	4 cut(s)	84, 236, 272, 599
BfmI	CTRYAG	1 cut(s)	51
BfrI	CTTAAG	1 cut(s)	307
BglI	GCCNNNNNGGC	1 cut(s)	931
BisI	GCNGC	4 cut(s)	71, 231, 774, 840
BlsI	GCNGC	4 cut(s)	72, 232, 775, 841
BmcAI	AGTACT	2 cut(s)	57, 519
Bme1390I	CCNGG	1 cut(s)	927
Bme18I	GGWCC	1 cut(s)	334
BmeT110I	CYCGRG	1 cut(s)	983
BmgT120I	GGNCC	2 cut(s)	334, 933
BmiI	GGNNCC	2 cut(s)	253, 335
BmrFI	CCNGG	1 cut(s)	927
BmsI	GCATC	2 cut(s)	23, 739
BmtI	GCTAGC	1 cut(s)	87
BoxI	GACNNNNGTC	1 cut(s)	672
BpmI	CTGGAG	1 cut(s)	99
BpuEI	CTTGAG	3 cut(s)	648, 800, 1010
BsaI	GGTCTC	1 cut(s)	521
BsaJI	CCNNGG	1 cut(s)	917
BsaWI	WCCGGW	1 cut(s)	512
BsaXI	ACNNNNNCTCC	4 cut(s)	97, 127, 520, 550
Bsc4I	CCNNNNNNNGG	1 cut(s)	545
Bse1I	ACTGG	2 cut(s)	116, 829
Bse3DI	GCAATG	3 cut(s)	300, 378, 617
BseBI	CCWGG	1 cut(s)	927
BseDI	CCNNGG	1 cut(s)	917
BseGI	GGATG	2 cut(s)	195, 588
BseLI	CCNNNNNNNGG	1 cut(s)	545
BseMI	GCAATG	3 cut(s)	300, 378, 617
BseNI	ACTGG	2 cut(s)	116, 829
BseXI	GCAGC	3 cut(s)	82, 760, 826
BseYI	CCCAGC	2 cut(s)	226, 433
BshFI	GGCC	3 cut(s)	832, 925, 934
BsiHKAI	GWGCWC	1 cut(s)	115
BsiHKCI	CYCGRG	1 cut(s)	983
BsiSI	CCGG	1 cut(s)	513
BslFI	GGGAC	2 cut(s)	416, 925
BslI	CCNNNNNNNGG	1 cut(s)	545
BsmAI	GTCTC	2 cut(s)	521, 815
BsmFI	GGGAC	2 cut(s)	416, 925
BsmI	GAATGC	1 cut(s)	210
BsnI	GGCC	3 cut(s)	832, 925, 934
Bso31I	GGTCTC	1 cut(s)	521
BsoBI	CYCGRG	1 cut(s)	983
Bsp1286I	GDGCHC	2 cut(s)	115, 1008
Bsp143I	GATC	1 cut(s)	217
BspACI	CCGC	4 cut(s)	164, 231, 383, 592
BspANI	GGCC	3 cut(s)	832, 925, 934
BspLI	GGNNCC	2 cut(s)	253, 335
BspOI	GCTAGC	1 cut(s)	87
BspPI	GGATC	1 cut(s)	212
BspQI	GCTCTTC	1 cut(s)	1013
BspTI	CTTAAG	1 cut(s)	307
BspTNI	GGTCTC	1 cut(s)	521
BsrBI	CCGCTC	1 cut(s)	233
BsrDI	GCAATG	3 cut(s)	300, 378, 617
BsrI	ACTGG	2 cut(s)	116, 829
BssECI	CCNNGG	1 cut(s)	917
BssMI	GATC	1 cut(s)	217
BssT1I	CCWWGG	1 cut(s)	917
Bst2UI	CCWGG	1 cut(s)	927
Bst4CI	ACNGT	2 cut(s)	423, 653
Bst6I	CTCTTC	1 cut(s)	1013
BstAFI	CTTAAG	1 cut(s)	307
BstC8I	GCNNGC	1 cut(s)	85
BstEII	GGTNACC	1 cut(s)	731
BstENI	CCTNNNNNAGG	1 cut(s)	543
BstF5I	GGATG	2 cut(s)	195, 588
BstKTI	GATC	1 cut(s)	220
BstMAI	GTCTC	2 cut(s)	521, 815
BstMBI	GATC	1 cut(s)	217
BstMWI	GCNNNNNNNGC	5 cut(s)	89, 239, 476, 848, 931
BstNI	CCWGG	1 cut(s)	927
BstNSI	RCATGY	1 cut(s)	902
BstPAI	GACNNNNGTC	1 cut(s)	672
BstPI	GGTNACC	1 cut(s)	731
BstSCI	CCNGG	1 cut(s)	925
BstSFI	CTRYAG	1 cut(s)	51
BstV1I	GCAGC	3 cut(s)	82, 760, 826
BsuRI	GGCC	3 cut(s)	832, 925, 934
BtgZI	GCGATG	1 cut(s)	159
BtsCI	GGATG	2 cut(s)	195, 588
BtsIMutI	CAGTG	1 cut(s)	658
Cac8I	GCNNGC	1 cut(s)	85
CaiI	CAGNNNCTG	2 cut(s)	824, 842
Cfr13I	GGNCC	2 cut(s)	334, 933
Csp6I	GTAC	6 cut(s)	56, 278, 376, 518, 634, 713
CspCI	CAANNNNNGTGG	2 cut(s)	841, 876
CviAII	CATG	5 cut(s)	330, 439, 754, 899, 958
CviQI	GTAC	6 cut(s)	56, 278, 376, 518, 634, 713
DpnI	GATC	1 cut(s)	219
DpnII	GATC	1 cut(s)	217
EaeI	YGGCCR	1 cut(s)	830
Eam1104I	CTCTTC	1 cut(s)	1013
EarI	CTCTTC	1 cut(s)	1013
Eco130I	CCWWGG	1 cut(s)	917
Eco24I	GRGCYC	1 cut(s)	1008
Eco31I	GGTCTC	1 cut(s)	521
Eco47I	GGWCC	1 cut(s)	334
Eco57I	CTGAAG	1 cut(s)	390
Eco88I	CYCGRG	1 cut(s)	983
Eco91I	GGTNACC	1 cut(s)	731
EcoNI	CCTNNNNNAGG	1 cut(s)	543
EcoO65I	GGTNACC	1 cut(s)	731
EcoRI	GAATTC	1 cut(s)	13
EcoRII	CCWGG	1 cut(s)	925
EcoT14I	CCWWGG	1 cut(s)	917
EcoT22I	ATGCAT	1 cut(s)	331
EcoT38I	GRGCYC	1 cut(s)	1008
ErhI	CCWWGG	1 cut(s)	917
FaeI	CATG	5 cut(s)	333, 442, 757, 902, 961
FaqI	GGGAC	2 cut(s)	416, 925
FatI	CATG	5 cut(s)	329, 438, 753, 898, 957
Fnu4HI	GCNGC	4 cut(s)	71, 231, 774, 840
FokI	GGATG	2 cut(s)	182, 575
FriOI	GRGCYC	1 cut(s)	1008
Fsp4HI	GCNGC	4 cut(s)	71, 231, 774, 840
FspBI	CTAG	4 cut(s)	84, 236, 272, 599
GluI	GCNGC	4 cut(s)	71, 231, 774, 840
GsaI	CCCAGC	2 cut(s)	230, 437
GsuI	CTGGAG	1 cut(s)	99
HaeIII	GGCC	3 cut(s)	832, 925, 934
HapII	CCGG	1 cut(s)	513
Hin1II	CATG	5 cut(s)	333, 442, 757, 902, 961
HincII	GTYRAC	1 cut(s)	628
HindII	GTYRAC	1 cut(s)	628
HinfI	GANTC	3 cut(s)	410, 892, 913
HpaI	GTTAAC	1 cut(s)	628
HpaII	CCGG	1 cut(s)	513
Hpy166II	GTNNAC	1 cut(s)	628
Hpy188I	TCNGA	4 cut(s)	45, 409, 562, 820
Hpy188III	TCNNGA	5 cut(s)	236, 452, 665, 677, 779
Hpy8I	GTNNAC	1 cut(s)	628
HpyAV	CCTTC	8 cut(s)	254, 302, 414, 549, 778, 898, 902, 924
HpyCH4III	ACNGT	2 cut(s)	423, 653
HpyCH4V	TGCA	4 cut(s)	329, 419, 479, 869
HpyF10VI	GCNNNNNNNGC	5 cut(s)	89, 239, 476, 848, 931
Hsp92II	CATG	5 cut(s)	333, 442, 757, 902, 961
KspAI	GTTAAC	1 cut(s)	628
Kzo9I	GATC	1 cut(s)	217
LguI	GCTCTTC	1 cut(s)	1013
LmnI	GCTCC	3 cut(s)	118, 257, 703
Lsp1109I	GCAGC	3 cut(s)	82, 760, 826
LweI	GCATC	2 cut(s)	23, 739
MaeI	CTAG	4 cut(s)	84, 236, 272, 599
MaeIII	GTNAC	1 cut(s)	731
MalI	GATC	1 cut(s)	219
MbiI	CCGCTC	1 cut(s)	233
MboI	GATC	1 cut(s)	217
MboII	GAAGA	1 cut(s)	1000
MfeI	CAATTG	2 cut(s)	858, 1048
MhlI	GDGCHC	2 cut(s)	115, 1008
MlsI	TGGCCA	1 cut(s)	832
MluCI	AATT	7 cut(s)	13, 368, 459, 486, 858, 886, 1048
MluNI	TGGCCA	1 cut(s)	832
MlyI	GAGTC	2 cut(s)	404, 907
MnlI	CCTC	6 cut(s)	188, 242, 448, 546, 788, 915
Mox20I	TGGCCA	1 cut(s)	832
Mph1103I	ATGCAT	1 cut(s)	331
MroXI	GAANNNNTTC	2 cut(s)	243, 291
MscI	TGGCCA	1 cut(s)	832
MseI	TTAA	3 cut(s)	308, 489, 627
MslI	CAYNNNNRTG	1 cut(s)	108
Msp20I	TGGCCA	1 cut(s)	832
MspA1I	CMGCKG	2 cut(s)	73, 839
MspCI	CTTAAG	1 cut(s)	307
MspI	CCGG	1 cut(s)	513
MspR9I	CCNGG	1 cut(s)	927
MunI	CAATTG	2 cut(s)	858, 1048
Mva1269I	GAATGC	1 cut(s)	210
MvaI	CCWGG	1 cut(s)	927
MwoI	GCNNNNNNNGC	5 cut(s)	89, 239, 476, 848, 931
NdeII	GATC	1 cut(s)	217
NheI	GCTAGC	1 cut(s)	83
NlaIII	CATG	5 cut(s)	333, 442, 757, 902, 961
NlaIV	GGNNCC	2 cut(s)	253, 335
NsiI	ATGCAT	1 cut(s)	331
NspI	RCATGY	1 cut(s)	902
OliI	CACNNNNGTG	1 cut(s)	108
PciI	ACATGT	1 cut(s)	898
PciSI	GCTCTTC	1 cut(s)	1013
PctI	GAATGC	1 cut(s)	210
PdmI	GAANNNNTTC	2 cut(s)	243, 291
PfeI	GAWTC	1 cut(s)	892
PkrI	GCNGC	4 cut(s)	72, 232, 775, 841
PleI	GAGTC	2 cut(s)	404, 907
PpsI	GAGTC	2 cut(s)	404, 907
PscI	ACATGT	1 cut(s)	898
PshAI	GACNNNNGTC	1 cut(s)	672
Psp6I	CCWGG	1 cut(s)	925
PspEI	GGTNACC	1 cut(s)	731
PspFI	CCCAGC	2 cut(s)	226, 433
PspGI	CCWGG	1 cut(s)	925
PspN4I	GGNNCC	2 cut(s)	253, 335
PspPI	GGNCC	2 cut(s)	334, 933
PsrI	GAACNNNNNNTAC	2 cut(s)	716, 748
PstNI	CAGNNNCTG	2 cut(s)	824, 842
PvuII	CAGCTG	2 cut(s)	73, 839
RsaI	GTAC	6 cut(s)	57, 279, 377, 519, 635, 714
RsaNI	GTAC	6 cut(s)	56, 278, 376, 518, 634, 713
RseI	CAYNNNNRTG	1 cut(s)	108
SapI	GCTCTTC	1 cut(s)	1013
SaqAI	TTAA	3 cut(s)	308, 489, 627
SatI	GCNGC	4 cut(s)	71, 231, 774, 840
Sau3AI	GATC	1 cut(s)	217
Sau96I	GGNCC	2 cut(s)	334, 933
ScaI	AGTACT	2 cut(s)	57, 519
SchI	GAGTC	2 cut(s)	404, 907
ScrFI	CCNGG	1 cut(s)	927
SduI	GDGCHC	2 cut(s)	115, 1008
SfaNI	GCATC	2 cut(s)	23, 739
SfcI	CTRYAG	1 cut(s)	51
SfiI	GGCCNNNNNGGCC	1 cut(s)	931
SinI	GGWCC	1 cut(s)	334
SmiMI	CAYNNNNRTG	1 cut(s)	108
SmlI	CTYRAG	4 cut(s)	307, 663, 779, 989
SmoI	CTYRAG	4 cut(s)	307, 663, 779, 989
Sse9I	AATT	7 cut(s)	13, 368, 459, 486, 858, 886, 1048
SsiI	CCGC	4 cut(s)	164, 231, 383, 592
SspI	AATATT	1 cut(s)	448
SspMI	CTAG	4 cut(s)	84, 236, 272, 599
StyD4I	CCNGG	1 cut(s)	925
StyI	CCWWGG	1 cut(s)	917
TaaI	ACNGT	2 cut(s)	423, 653
TaqI	TCGA	6 cut(s)	11, 247, 497, 507, 542, 747
TasI	AATT	7 cut(s)	13, 368, 459, 486, 858, 886, 1048
TatI	WGTACW	3 cut(s)	55, 375, 517
TauI	GCSGC	1 cut(s)	233
TfiI	GAWTC	1 cut(s)	892
Tru1I	TTAA	3 cut(s)	308, 489, 627
Tru9I	TTAA	3 cut(s)	308, 489, 627
TscAI	CASTG	1 cut(s)	658
TseI	GCWGC	3 cut(s)	70, 773, 839
TspDTI	ATGAA	2 cut(s)	300, 408
TspRI	CASTG	1 cut(s)	658
Vha464I	CTTAAG	1 cut(s)	307
VpaK11BI	GGWCC	1 cut(s)	334
XagI	CCTNNNNNAGG	1 cut(s)	543
XapI	RAATTY	3 cut(s)	13, 368, 886
XbaI	TCTAGA	1 cut(s)	235
XceI	RCATGY	1 cut(s)	902
XmnI	GAANNNNTTC	2 cut(s)	243, 291
XspI	CTAG	4 cut(s)	84, 236, 272, 599
ZrmI	AGTACT	2 cut(s)	57, 519
Zsp2I	ATGCAT	1 cut(s)	331

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.