Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0006449

Physical Location & Seq

Genomic Coordinates Reverse (-)

8972040 .. 8974301

Gene Structure 2262 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G051800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1032 bp

ATGGCTAAATCCAATTCGTCAGTCGGTAGAGGCCCTTCAATGATTTCGATAGTATTTCTACTTGGGCTGCTGATGGCTAGCTTTGAAACAACAGGAGCCCAGATTGGTGTATGTTATGGAATGCTTGGAGATCGTTTACCACCCCCATCAGAAGTTATTGCTCTGTATAAGCAAAATAACATCAGAAGGATGCGACTGTATGATCCAAACCAGGCTGCTCTAGCAGCCCTTAGAGGCTCTAATATTGAGCTCATGCTAGGCGTTCCAAATGACAACCTTCAAAGCCTAGCCTCAAGCCAGGCCAATGCAAATACTTGGGTCCAAAACAATGTGAGAAACTATGGCAATGTAAGATTCAAATACATTGCGGTAGGAAATGAAGTCAAGCCCTCAGACTCCTATGCACAATTTCTTGTCCCGGCCATGCAAAACATTCAGAACGCAATTTCTAGTGCTGGTTTGGGAATTAAAGTCTCCACTGCCGTAGACACTGGAGTGCTTGGAAATTCCTTTCCTCCATCGAAGGGAGAGTTCAAGTCCGAATATGGAGCACTTTTGAACCCCATCATCCGCTTCCTAGTGAACAACAGATCGCCGTTGCTGGTTAATTTGTACCCGTATTTCAGCTACAGCAGCAACACTCACGACATTCGTCTAGATTATGCTCTTTTCACAGCTCCATCAGTTGTGGTACAAGATGGCCAACGTGGCTATCGTAATCTTTTCGATGCCATTTTGGACGCTGTTTATGCCGCTCTTGAGAAGGCGGGCGGAGGGTCTTTGGAAATTGTCATATCCGAAAGTGGTTGGCCATCAGCTGGTGGAACGGCAACAACAATTGATAATGCAAGGACTTATAATGCAAATCTGATTCAACATGTGAAGGGAGGGACTCCAAGGAAGCCCGGAAGGGCCATAGAAACCTACATCTTTGCCATGTTTGATGAGAACAGAAAGAACCCAGAGTTGGAGAAACATTGGGGGCTGTTTTCACCAAGCAAACAGCCGAAATACCCAATCAATTTCAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_17

Protein Analysis

344

Amino Acids

37.41

Weight (kDa)

9.23

Isoelectric Point (pI)

37.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006449)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G57240 AT3G57270
malus_domestica	MD14G1078700.v1.1 MD14G1079900.v1.1 MD14G1080000.v1.1 MD14G1080100.v1.1
prunus_persica	Prupe.7G051700_v2.0.a1 Prupe.7G051800_v2.0.a1 Prupe.7G051900_v2.0.a1 Prupe.7G052000_v2.0.a1
pyrus_communis	pycom12g07070 pycom14g06760 pycom14g06890 pycom14g06920 pycom14g06930 pycom14g06950
rosa_chinensis	RchiOBHm_Chr7g0178171
rosa_laevigata	RLG00000005465
rosa_multiflora	Rmu_sc0007855.1_g000007
rosa_roxburghii	Rroxscaffold_3G00275110
rosa_rugosa	Rorug06G0413800
rosa_samantha	Rh7AG013500 Rh7BG013400 Rh7CG013300 Rh7DG013600
rosa_wichuraiana	Rw7G001070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	858
AccB7I	CCANNNNNTGG	1 cut(s)	818
AccBSI	CCGCTC	1 cut(s)	755
AccI	GTMKAC	1 cut(s)	486
AciI	CCGC	5 cut(s)	368, 571, 753, 767, 771
AclWI	GGATC	1 cut(s)	197
AcoI	YGGCCR	3 cut(s)	420, 700, 809
AcsI	RAATTY	1 cut(s)	505
AfaI	GTAC	2 cut(s)	614, 693
AfiI	CCNNNNNNNGG	3 cut(s)	524, 818, 967
AflIII	ACRYGT	1 cut(s)	877
AgsI	TTSAA	8 cut(s)	39, 86, 281, 358, 535, 559, 875, 1027
AjnI	CCWGG	2 cut(s)	210, 297
AjuI	GAANNNNNNNTTGG	2 cut(s)	950, 982
AleI	CACNNNNGTG	1 cut(s)	494
AluBI	AGCT	5 cut(s)	81, 250, 627, 677, 818
AluI	AGCT	5 cut(s)	81, 250, 627, 677, 818
Alw21I	GWGCWC	2 cut(s)	252, 553
Alw26I	GTCTC	1 cut(s)	478
AlwI	GGATC	1 cut(s)	197
AoxI	GGCC	6 cut(s)	31, 300, 420, 700, 809, 912
ApeKI	GCWGC	4 cut(s)	67, 215, 224, 633
ApoI	RAATTY	1 cut(s)	505
AspS9I	GGNCC	3 cut(s)	32, 319, 912
AsuC2I	CCSGG	2 cut(s)	419, 906
AsuHPI	GGTGA	1 cut(s)	984
AsuNHI	GCTAGC	1 cut(s)	77
AvaII	GGWCC	1 cut(s)	319
BalI	TGGCCA	2 cut(s)	702, 811
BanII	GRGCYC	2 cut(s)	100, 252
BarI	GAAGNNNNNNTAC	2 cut(s)	19, 51
Bbv12I	GWGCWC	2 cut(s)	252, 553
BbvI	GCAGC	4 cut(s)	54, 202, 236, 645
BccI	CCATC	7 cut(s)	67, 154, 526, 572, 688, 692, 820
BceAI	ACGGC	3 cut(s)	467, 580, 843
BciT130I	CCWGG	2 cut(s)	212, 299
BcnI	CCSGG	2 cut(s)	419, 906
BcoDI	GTCTC	1 cut(s)	478
BfaI	CTAG	7 cut(s)	78, 221, 257, 287, 450, 578, 656
BfmI	CTRYAG	1 cut(s)	628
BglI	GCCNNNNNGGC	1 cut(s)	708
BisI	GCNGC	5 cut(s)	68, 216, 225, 634, 753
BlsI	GCNGC	5 cut(s)	69, 217, 226, 635, 754
Bme1390I	CCNGG	4 cut(s)	212, 299, 419, 906
Bme18I	GGWCC	1 cut(s)	319
BmgT120I	GGNCC	3 cut(s)	32, 319, 912
BmiI	GGNNCC	2 cut(s)	97, 320
BmrFI	CCNGG	4 cut(s)	212, 299, 419, 906
BmsI	GCATC	2 cut(s)	180, 718
BmtI	GCTAGC	1 cut(s)	81
BoxI	GACNNNNGTC	1 cut(s)	651
BpmI	CTGGAG	1 cut(s)	513
BpuEI	CTTGAG	2 cut(s)	277, 779
BpuMI	CCSGG	2 cut(s)	419, 906
BsaJI	CCNNGG	1 cut(s)	896
Bsc4I	CCNNNNNNNGG	3 cut(s)	524, 818, 967
Bse1I	ACTGG	1 cut(s)	496
Bse3DI	GCAATG	2 cut(s)	352, 363
BseBI	CCWGG	2 cut(s)	212, 299
BseDI	CCNNGG	1 cut(s)	896
BseGI	GGATG	2 cut(s)	195, 567
BseLI	CCNNNNNNNGG	3 cut(s)	524, 818, 967
BseMI	GCAATG	2 cut(s)	352, 363
BseMII	CTCAG	1 cut(s)	405
BseNI	ACTGG	1 cut(s)	496
BseXI	GCAGC	4 cut(s)	54, 202, 236, 645
BshFI	GGCC	6 cut(s)	33, 302, 422, 702, 811, 914
BsiHKAI	GWGCWC	2 cut(s)	252, 553
BsiSI	CCGG	2 cut(s)	419, 906
BslFI	GGGAC	2 cut(s)	401, 904
BslI	CCNNNNNNNGG	3 cut(s)	524, 818, 967
BsmAI	GTCTC	1 cut(s)	478
BsmFI	GGGAC	2 cut(s)	401, 904
BsmI	GAATGC	1 cut(s)	126
BsnI	GGCC	6 cut(s)	33, 302, 422, 702, 811, 914
Bsp1286I	GDGCHC	3 cut(s)	100, 252, 553
Bsp143I	GATC	3 cut(s)	130, 202, 590
BspACI	CCGC	5 cut(s)	368, 571, 753, 767, 771
BspANI	GGCC	6 cut(s)	33, 302, 422, 702, 811, 914
BspCNI	CTCAG	1 cut(s)	404
BspLI	GGNNCC	2 cut(s)	97, 320
BspOI	GCTAGC	1 cut(s)	81
BspPI	GGATC	1 cut(s)	197
BsrBI	CCGCTC	1 cut(s)	755
BsrDI	GCAATG	2 cut(s)	352, 363
BsrI	ACTGG	1 cut(s)	496
BssECI	CCNNGG	1 cut(s)	896
BssMI	GATC	3 cut(s)	130, 202, 590
BssT1I	CCWWGG	1 cut(s)	896
Bst2UI	CCWGG	2 cut(s)	212, 299
Bst4CI	ACNGT	1 cut(s)	198
BstC8I	GCNNGC	2 cut(s)	79, 769
BstDEI	CTNAG	2 cut(s)	230, 391
BstF5I	GGATG	2 cut(s)	195, 567
BstKTI	GATC	3 cut(s)	133, 205, 593
BstMAI	GTCTC	1 cut(s)	478
BstMBI	GATC	3 cut(s)	130, 202, 590
BstMWI	GCNNNNNNNGC	5 cut(s)	221, 224, 633, 708, 749
BstNI	CCWGG	2 cut(s)	212, 299
BstNSI	RCATGY	1 cut(s)	881
BstPAI	GACNNNNGTC	1 cut(s)	651
BstSCI	CCNGG	4 cut(s)	210, 297, 417, 904
BstSFI	CTRYAG	1 cut(s)	628
BstV1I	GCAGC	4 cut(s)	54, 202, 236, 645
BsuRI	GGCC	6 cut(s)	33, 302, 422, 702, 811, 914
BtsCI	GGATG	2 cut(s)	195, 567
BtsI	GCAGTG	1 cut(s)	477
BtsIMutI	CAGTG	2 cut(s)	477, 489
Cac8I	GCNNGC	2 cut(s)	79, 769
Cfr13I	GGNCC	3 cut(s)	32, 319, 912
CseI	GACGC	1 cut(s)	749
Csp6I	GTAC	2 cut(s)	613, 692
CviAII	CATG	4 cut(s)	253, 424, 878, 937
CviQI	GTAC	2 cut(s)	613, 692
DdeI	CTNAG	2 cut(s)	230, 391
DpnI	GATC	3 cut(s)	132, 204, 592
DpnII	GATC	3 cut(s)	130, 202, 590
EaeI	YGGCCR	3 cut(s)	420, 700, 809
EciI	GGCGGA	1 cut(s)	786
Ecl136II	GAGCTC	1 cut(s)	250
Eco130I	CCWWGG	1 cut(s)	896
Eco24I	GRGCYC	2 cut(s)	100, 252
Eco47I	GGWCC	1 cut(s)	319
Eco53kI	GAGCTC	1 cut(s)	250
EcoICRI	GAGCTC	1 cut(s)	250
EcoO109I	RGGNCCY	1 cut(s)	32
EcoRII	CCWGG	2 cut(s)	210, 297
EcoT14I	CCWWGG	1 cut(s)	896
EcoT38I	GRGCYC	2 cut(s)	100, 252
ErhI	CCWWGG	1 cut(s)	896
FaeI	CATG	4 cut(s)	256, 427, 881, 940
FaqI	GGGAC	2 cut(s)	401, 904
FatI	CATG	4 cut(s)	252, 423, 877, 936
FauI	CCCGC	1 cut(s)	760
FblI	GTMKAC	1 cut(s)	486
Fnu4HI	GCNGC	5 cut(s)	68, 216, 225, 634, 753
FokI	GGATG	2 cut(s)	202, 554
FriOI	GRGCYC	2 cut(s)	100, 252
Fsp4HI	GCNGC	5 cut(s)	68, 216, 225, 634, 753
FspBI	CTAG	7 cut(s)	78, 221, 257, 287, 450, 578, 656
GluI	GCNGC	5 cut(s)	68, 216, 225, 634, 753
GsuI	CTGGAG	1 cut(s)	513
HaeIII	GGCC	6 cut(s)	33, 302, 422, 702, 811, 914
HapII	CCGG	2 cut(s)	419, 906
HgaI	GACGC	1 cut(s)	749
Hin1II	CATG	4 cut(s)	256, 427, 881, 940
HinfI	GANTC	4 cut(s)	354, 395, 871, 892
HpaII	CCGG	2 cut(s)	419, 906
HphI	GGTGA	1 cut(s)	984
Hpy166II	GTNNAC	3 cut(s)	137, 487, 583
Hpy188I	TCNGA	7 cut(s)	151, 185, 394, 438, 541, 799, 870
Hpy188III	TCNNGA	3 cut(s)	644, 656, 758
Hpy8I	GTNNAC	3 cut(s)	137, 487, 583
HpyAV	CCTTC	7 cut(s)	45, 180, 287, 517, 757, 877, 903
HpyCH4III	ACNGT	1 cut(s)	198
HpyCH4IV	ACGT	1 cut(s)	706
HpyCH4V	TGCA	5 cut(s)	308, 404, 427, 848, 863
HpyF10VI	GCNNNNNNNGC	5 cut(s)	221, 224, 633, 708, 749
HpyF3I	CTNAG	2 cut(s)	230, 391
HpySE526I	ACGT	1 cut(s)	706
Hsp92II	CATG	4 cut(s)	256, 427, 881, 940
Kzo9I	GATC	3 cut(s)	130, 202, 590
LmnI	GCTCC	3 cut(s)	95, 548, 682
Lsp1109I	GCAGC	4 cut(s)	54, 202, 236, 645
LweI	GCATC	2 cut(s)	180, 718
MaeI	CTAG	7 cut(s)	78, 221, 257, 287, 450, 578, 656
MaeII	ACGT	1 cut(s)	706
MalI	GATC	3 cut(s)	132, 204, 592
MbiI	CCGCTC	1 cut(s)	755
MboI	GATC	3 cut(s)	130, 202, 590
MfeI	CAATTG	1 cut(s)	837
MhlI	GDGCHC	3 cut(s)	100, 252, 553
MlsI	TGGCCA	2 cut(s)	702, 811
MluCI	AATT	9 cut(s)	13, 407, 444, 465, 505, 607, 786, 837, 1021
MluNI	TGGCCA	2 cut(s)	702, 811
MlyI	GAGTC	2 cut(s)	389, 886
MmeI	TCCRAC	1 cut(s)	948
MnlI	CCTC	7 cut(s)	23, 227, 301, 400, 525, 767, 881
Mox20I	TGGCCA	2 cut(s)	702, 811
MscI	TGGCCA	2 cut(s)	702, 811
MseI	TTAA	2 cut(s)	468, 606
MslI	CAYNNNNRTG	1 cut(s)	494
Msp20I	TGGCCA	2 cut(s)	702, 811
MspA1I	CMGCKG	1 cut(s)	818
MspI	CCGG	2 cut(s)	419, 906
MspR9I	CCNGG	4 cut(s)	212, 299, 419, 906
MunI	CAATTG	1 cut(s)	837
Mva1269I	GAATGC	1 cut(s)	126
MvaI	CCWGG	2 cut(s)	212, 299
MwoI	GCNNNNNNNGC	5 cut(s)	221, 224, 633, 708, 749
NciI	CCSGG	2 cut(s)	419, 906
NdeII	GATC	3 cut(s)	130, 202, 590
NheI	GCTAGC	1 cut(s)	77
NlaIII	CATG	4 cut(s)	256, 427, 881, 940
NlaIV	GGNNCC	2 cut(s)	97, 320
NspI	RCATGY	1 cut(s)	881
OliI	CACNNNNGTG	1 cut(s)	494
PciI	ACATGT	1 cut(s)	877
PcsI	WCGNNNNNNNCGW	1 cut(s)	712
PctI	GAATGC	1 cut(s)	126
PfeI	GAWTC	2 cut(s)	354, 871
PflMI	CCANNNNNTGG	1 cut(s)	818
PkrI	GCNGC	5 cut(s)	69, 217, 226, 635, 754
PleI	GAGTC	2 cut(s)	389, 886
PpsI	GAGTC	2 cut(s)	389, 886
PscI	ACATGT	1 cut(s)	877
PshAI	GACNNNNGTC	1 cut(s)	651
PsiI	TTATAA	1 cut(s)	858
Psp124BI	GAGCTC	1 cut(s)	252
Psp6I	CCWGG	2 cut(s)	210, 297
PspGI	CCWGG	2 cut(s)	210, 297
PspN4I	GGNNCC	2 cut(s)	97, 320
PspPI	GGNCC	3 cut(s)	32, 319, 912
PvuII	CAGCTG	1 cut(s)	818
RsaI	GTAC	2 cut(s)	614, 693
RsaNI	GTAC	2 cut(s)	613, 692
RseI	CAYNNNNRTG	1 cut(s)	494
SacI	GAGCTC	1 cut(s)	252
SaqAI	TTAA	2 cut(s)	468, 606
SatI	GCNGC	5 cut(s)	68, 216, 225, 634, 753
Sau3AI	GATC	3 cut(s)	130, 202, 590
Sau96I	GGNCC	3 cut(s)	32, 319, 912
SchI	GAGTC	2 cut(s)	389, 886
ScrFI	CCNGG	4 cut(s)	212, 299, 419, 906
SduI	GDGCHC	3 cut(s)	100, 252, 553
SetI	ASST	8 cut(s)	83, 252, 279, 629, 679, 709, 820, 926
SfaNI	GCATC	2 cut(s)	180, 718
SfcI	CTRYAG	1 cut(s)	628
SinI	GGWCC	1 cut(s)	319
SmiMI	CAYNNNNRTG	1 cut(s)	494
SmlI	CTYRAG	2 cut(s)	292, 758
SmoI	CTYRAG	2 cut(s)	292, 758
Sse9I	AATT	9 cut(s)	13, 407, 444, 465, 505, 607, 786, 837, 1021
SsiI	CCGC	5 cut(s)	368, 571, 753, 767, 771
SspI	AATATT	1 cut(s)	244
SspMI	CTAG	7 cut(s)	78, 221, 257, 287, 450, 578, 656
SstI	GAGCTC	1 cut(s)	252
StyD4I	CCNGG	4 cut(s)	210, 297, 417, 904
StyI	CCWWGG	1 cut(s)	896
TaaI	ACNGT	1 cut(s)	198
TaiI	ACGT	1 cut(s)	709
TaqI	TCGA	3 cut(s)	47, 521, 726
TasI	AATT	9 cut(s)	13, 407, 444, 465, 505, 607, 786, 837, 1021
TauI	GCSGC	1 cut(s)	755
TfiI	GAWTC	2 cut(s)	354, 871
Tru1I	TTAA	2 cut(s)	468, 606
Tru9I	TTAA	2 cut(s)	468, 606
TscAI	CASTG	2 cut(s)	484, 496
TseI	GCWGC	4 cut(s)	67, 215, 224, 633
TspDTI	ATGAA	1 cut(s)	393
TspRI	CASTG	2 cut(s)	484, 496
Van91I	CCANNNNNTGG	1 cut(s)	818
VpaK11BI	GGWCC	1 cut(s)	319
XapI	RAATTY	1 cut(s)	505
XbaI	TCTAGA	1 cut(s)	655
XceI	RCATGY	1 cut(s)	881
XmiI	GTMKAC	1 cut(s)	486
XspI	CTAG	7 cut(s)	78, 221, 257, 287, 450, 578, 656

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.