Prupe.7G051900_v2.0.a1

Glucan endo-1,3-beta-glucosidase, basic

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
8977050 .. 8977837
788 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G051900.1

Sequence Viewer

Length: 753 bp
ATGGTTGGCGATGACCTACCACCCCAAGCAGAGGTTGTTTCTCTCTACAAGACAAATAACATCCCAAGAATGCGACTTTATGATCCAAACCCAGCCGCTCTAGAAGCCCTTCGAGGCTCCAATATCAAGCTCTTGCTAGGCCCAAGCCATCGCAAATGCATGGTTCCAAAAAATGTGAGAAACTATGCCAATGTGAAATTCAAGTACATTGCCGTAGGAAATGAAGTCAAGCCTTCAGACTCCTTTGCACAGTTTCTCGTCCCAGCCATGCAAAAACTTCAAAAGGCAATTTCTCTTGCTGGTCTTGCAAATAAAATTAAAGTTTTGACAGCCATCGACACCGGAGTCCTTGGAGGGACCTTTCCTCCTTCGATAGGCTCTTTCAAGTCTGAATATAACGCACTTTTACATCCCATCATCCGTTTCCTAGTGAACCACCAATCGCCATTGCTTGTTAACTTGTACCCTTATTTTGCTTACTGTGGCAACACTCAAGACATTCGTCTTGATTATGCTCTTTTCACAGCTCCATCAGTTGTGGTACAAGATGGGAACTTTGGTTATCGTAATCTTTTCGATGCCATGTTGGATGGTGTTTATGCTGCTCTTGAGAAGGCTGGTGGAGGGTCTTTGAAAGTTGTTATATCAGAGACTGGTTGGCCATCAGCTGCTGGAACAGCCACAACAATTGATAATGCAAGGACTTATCGGAGAAATAGGAAGAGGGGGCTGGTGTATTTATCGGAGAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

251

Amino Acids

27.43

Weight (kDa)

9.61

Isoelectric Point (pI)

35.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 344
AccBSI CCGCTC 1 cut(s) 98
AciI CCGC 1 cut(s) 96
AclWI GGATC 1 cut(s) 77
AcoI YGGCCR 1 cut(s) 659
AcsI RAATTY 1 cut(s) 197
AcuI CTGAAG 1 cut(s) 219
AfaI GTAC 3 cut(s) 206, 464, 543
AfiI CCNNNNNNNGG 2 cut(s) 31, 374
AgsI TTSAA 4 cut(s) 202, 281, 385, 634
AjuI GAANNNNNNNTTGG 2 cut(s) 182, 214
AluBI AGCT 3 cut(s) 130, 527, 668
AluI AGCT 3 cut(s) 130, 527, 668
Alw26I GTCTC 1 cut(s) 644
AlwI GGATC 1 cut(s) 77
AlwNI CAGNNNCTG 2 cut(s) 653, 671
AoxI GGCC 2 cut(s) 139, 659
ApeKI GCWGC 2 cut(s) 602, 668
ApoI RAATTY 1 cut(s) 197
Asp700I GAANNNNTTC 1 cut(s) 108
AspS9I GGNCC 2 cut(s) 140, 357
AvaII GGWCC 1 cut(s) 357
BalI TGGCCA 1 cut(s) 661
BbvI GCAGC 2 cut(s) 589, 655
BccI CCATC 7 cut(s) 156, 341, 422, 538, 542, 584, 670
BceAI ACGGC 1 cut(s) 197
BcoDI GTCTC 1 cut(s) 644
BfaI CTAG 3 cut(s) 101, 137, 428
BisI GCNGC 3 cut(s) 96, 603, 669
BlsI GCNGC 3 cut(s) 97, 604, 670
Bme18I GGWCC 1 cut(s) 357
BmgT120I GGNCC 2 cut(s) 140, 357
BmiI GGNNCC 3 cut(s) 118, 165, 358
BmsI GCATC 1 cut(s) 568
BoxI GACNNNNGTC 1 cut(s) 501
BpuEI CTTGAG 2 cut(s) 477, 629
BsaJI CCNNGG 1 cut(s) 349
BsaWI WCCGGW 1 cut(s) 341
BsaXI ACNNNNNCTCC 2 cut(s) 349, 379
Bsc4I CCNNNNNNNGG 2 cut(s) 31, 374
Bse1I ACTGG 1 cut(s) 658
Bse3DI GCAATG 2 cut(s) 207, 446
BseDI CCNNGG 1 cut(s) 349
BseGI GGATG 4 cut(s) 60, 409, 417, 595
BseLI CCNNNNNNNGG 2 cut(s) 31, 374
BseMI GCAATG 2 cut(s) 207, 446
BseNI ACTGG 1 cut(s) 658
BseXI GCAGC 2 cut(s) 589, 655
BseYI CCCAGC 2 cut(s) 91, 262
BshFI GGCC 2 cut(s) 141, 661
BsiSI CCGG 1 cut(s) 342
BslFI GGGAC 2 cut(s) 245, 370
BslI CCNNNNNNNGG 2 cut(s) 31, 374
BsmAI GTCTC 1 cut(s) 644
BsmFI GGGAC 2 cut(s) 245, 370
BsmI GAATGC 1 cut(s) 75
BsnI GGCC 2 cut(s) 141, 661
Bsp143I GATC 1 cut(s) 82
BspACI CCGC 1 cut(s) 96
BspANI GGCC 2 cut(s) 141, 661
BspLI GGNNCC 3 cut(s) 118, 165, 358
BspPI GGATC 1 cut(s) 77
BsrBI CCGCTC 1 cut(s) 98
BsrDI GCAATG 2 cut(s) 207, 446
BsrI ACTGG 1 cut(s) 658
BssECI CCNNGG 1 cut(s) 349
BssMI GATC 1 cut(s) 82
BssT1I CCWWGG 1 cut(s) 349
Bst4CI ACNGT 2 cut(s) 252, 482
Bst6I CTCTTC 1 cut(s) 716
BstENI CCTNNNNNAGG 1 cut(s) 372
BstF5I GGATG 4 cut(s) 60, 409, 417, 595
BstKTI GATC 1 cut(s) 85
BstMAI GTCTC 1 cut(s) 644
BstMBI GATC 1 cut(s) 82
BstMWI GCNNNNNNNGC 3 cut(s) 104, 305, 677
BstPAI GACNNNNGTC 1 cut(s) 501
BstV1I GCAGC 2 cut(s) 589, 655
BsuRI GGCC 2 cut(s) 141, 661
BtgZI GCGATG 2 cut(s) 24, 134
BtsCI GGATG 4 cut(s) 60, 409, 417, 595
CaiI CAGNNNCTG 2 cut(s) 653, 671
Cfr13I GGNCC 2 cut(s) 140, 357
Csp6I GTAC 3 cut(s) 205, 463, 542
CspCI CAANNNNNGTGG 2 cut(s) 670, 705
CviAII CATG 3 cut(s) 160, 268, 583
CviQI GTAC 3 cut(s) 205, 463, 542
DpnI GATC 1 cut(s) 84
DpnII GATC 1 cut(s) 82
DrdI GACNNNNNNGTC 1 cut(s) 344
DseDI GACNNNNNNGTC 1 cut(s) 344
EaeI YGGCCR 1 cut(s) 659
Eam1104I CTCTTC 1 cut(s) 716
EarI CTCTTC 1 cut(s) 716
Eco130I CCWWGG 1 cut(s) 349
Eco47I GGWCC 1 cut(s) 357
Eco57I CTGAAG 1 cut(s) 219
EcoNI CCTNNNNNAGG 1 cut(s) 372
EcoO109I RGGNCCY 1 cut(s) 357
EcoT14I CCWWGG 1 cut(s) 349
EcoT22I ATGCAT 1 cut(s) 161
ErhI CCWWGG 1 cut(s) 349
FaeI CATG 3 cut(s) 163, 271, 586
FaiI YATR 9 cut(s) 81, 161, 186, 269, 396, 513, 584, 600, 644
FaqI GGGAC 2 cut(s) 245, 370
FatI CATG 3 cut(s) 159, 267, 582
Fnu4HI GCNGC 3 cut(s) 96, 603, 669
FokI GGATG 4 cut(s) 47, 396, 404, 602
Fsp4HI GCNGC 3 cut(s) 96, 603, 669
FspBI CTAG 3 cut(s) 101, 137, 428
GluI GCNGC 3 cut(s) 96, 603, 669
GsaI CCCAGC 2 cut(s) 95, 266
HaeIII GGCC 2 cut(s) 141, 661
HapII CCGG 1 cut(s) 342
Hin1II CATG 3 cut(s) 163, 271, 586
HincII GTYRAC 1 cut(s) 457
HindII GTYRAC 1 cut(s) 457
HinfI GANTC 2 cut(s) 239, 345
HpaI GTTAAC 1 cut(s) 457
HpaII CCGG 1 cut(s) 342
Hpy166II GTNNAC 2 cut(s) 433, 457
Hpy188I TCNGA 5 cut(s) 238, 391, 649, 711, 745
Hpy188III TCNNGA 4 cut(s) 101, 494, 506, 608
Hpy8I GTNNAC 2 cut(s) 433, 457
HpyAV CCTTC 4 cut(s) 119, 243, 378, 607
HpyCH4III ACNGT 2 cut(s) 252, 482
HpyCH4V TGCA 5 cut(s) 159, 248, 271, 308, 698
HpyF10VI GCNNNNNNNGC 3 cut(s) 104, 305, 677
Hsp92II CATG 3 cut(s) 163, 271, 586
KspAI GTTAAC 1 cut(s) 457
Kzo9I GATC 1 cut(s) 82
LmnI GCTCC 2 cut(s) 122, 532
LpnPI CCDG 8 cut(s) 105, 276, 285, 355, 603, 639, 657, 716
Lsp1109I GCAGC 2 cut(s) 589, 655
LweI GCATC 1 cut(s) 568
MaeI CTAG 3 cut(s) 101, 137, 428
MalI GATC 1 cut(s) 84
MbiI CCGCTC 1 cut(s) 98
MboI GATC 1 cut(s) 82
MboII GAAGA 1 cut(s) 733
MfeI CAATTG 1 cut(s) 687
MlsI TGGCCA 1 cut(s) 661
MluCI AATT 4 cut(s) 197, 288, 315, 687
MluNI TGGCCA 1 cut(s) 661
MlyI GAGTC 2 cut(s) 233, 354
MmeI TCCRAC 1 cut(s) 567
MnlI CCTC 6 cut(s) 25, 107, 347, 375, 617, 717
Mox20I TGGCCA 1 cut(s) 661
Mph1103I ATGCAT 1 cut(s) 161
MroXI GAANNNNTTC 1 cut(s) 108
MscI TGGCCA 1 cut(s) 661
MseI TTAA 2 cut(s) 318, 456
Msp20I TGGCCA 1 cut(s) 661
MspA1I CMGCKG 1 cut(s) 668
MspI CCGG 1 cut(s) 342
MunI CAATTG 1 cut(s) 687
Mva1269I GAATGC 1 cut(s) 75
MwoI GCNNNNNNNGC 3 cut(s) 104, 305, 677
NdeII GATC 1 cut(s) 82
NlaIII CATG 3 cut(s) 163, 271, 586
NlaIV GGNNCC 3 cut(s) 118, 165, 358
NsiI ATGCAT 1 cut(s) 161
PctI GAATGC 1 cut(s) 75
PdmI GAANNNNTTC 1 cut(s) 108
PkrI GCNGC 3 cut(s) 97, 604, 670
PleI GAGTC 2 cut(s) 233, 353
PpsI GAGTC 2 cut(s) 233, 353
PpuMI RGGWCCY 1 cut(s) 357
PshAI GACNNNNGTC 1 cut(s) 501
Psp5II RGGWCCY 1 cut(s) 357
PspFI CCCAGC 2 cut(s) 91, 262
PspN4I GGNNCC 3 cut(s) 118, 165, 358
PspPI GGNCC 2 cut(s) 140, 357
PspPPI RGGWCCY 1 cut(s) 357
PstNI CAGNNNCTG 2 cut(s) 653, 671
PvuII CAGCTG 1 cut(s) 668
RsaI GTAC 3 cut(s) 206, 464, 543
RsaNI GTAC 3 cut(s) 205, 463, 542
SaqAI TTAA 2 cut(s) 318, 456
SatI GCNGC 3 cut(s) 96, 603, 669
Sau3AI GATC 1 cut(s) 82
Sau96I GGNCC 2 cut(s) 140, 357
SchI GAGTC 2 cut(s) 233, 354
SetI ASST 6 cut(s) 18, 36, 132, 362, 529, 670
SfaNI GCATC 1 cut(s) 568
SinI GGWCC 1 cut(s) 357
SmlI CTYRAG 2 cut(s) 492, 608
SmoI CTYRAG 2 cut(s) 492, 608
Sse9I AATT 4 cut(s) 197, 288, 315, 687
SsiI CCGC 1 cut(s) 96
SspMI CTAG 3 cut(s) 101, 137, 428
StyI CCWWGG 1 cut(s) 349
TaaI ACNGT 2 cut(s) 252, 482
TaqI TCGA 4 cut(s) 112, 336, 371, 576
TasI AATT 4 cut(s) 197, 288, 315, 687
TatI WGTACW 1 cut(s) 204
TauI GCSGC 1 cut(s) 98
Tru1I TTAA 2 cut(s) 318, 456
Tru9I TTAA 2 cut(s) 318, 456
TseI GCWGC 2 cut(s) 602, 668
TspDTI ATGAA 1 cut(s) 237
TspGWI ACGGA 1 cut(s) 410
VpaK11BI GGWCC 1 cut(s) 357
XagI CCTNNNNNAGG 1 cut(s) 372
XapI RAATTY 1 cut(s) 197
XbaI TCTAGA 1 cut(s) 100
XmnI GAANNNNTTC 1 cut(s) 108
XspI CTAG 3 cut(s) 101, 137, 428
Zsp2I ATGCAT 1 cut(s) 161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.