Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0007160

Physical Location & Seq

Genomic Coordinates Reverse (-)

10745779 .. 10748984

Gene Structure 3206 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G069400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 804 bp

ATGAGATACAATACGAATTCGATCGCTCTCCTCCTAATCAGAGACACCTTGGTCAGACTCCCGAAACGCTTCAAACCCACGATATTACAACCAAGGAGACCATTTTGCTCCAAGGCTCCAAATACGAACACCAACACAAACTACAACCAGAGCAGTGGCAATGCTGAGGAGACAAGTCTGAGTAGATACCAGGACTCGCTTAAGCAACTGGACAAGCTCGACTTCATGAAAGCTGCAAAAATCCTCTTCACTGGTCCACCTTCCAAAAAAAAGTTTGGGCTCGATTTCCATTTGGTACAACTGTTCTTTGTTTGCATGCCTTCCTTGGCTGTGTATCTGGTGGCTCAATATGCTCGCTATGAAATTAGAAGAATGGAAGCGGAACTGGAGCAGAAAAAGAAGAAAGAAGAAGAAGCGAAAGCAAAAGAAAAAGAAATAGAACTAAAGGCTGCTGAAGAAAAAGAAGCCTCTAATCCAGAACTTTTGGAGGTAAGAGTGAGACTAGATAAACTTGAAGAAACTCTGAAGGAATTTGTGGTTGAATCAAAGAAGCAAATGAATAGTGGCCAAACAAAAGAGCATGAAGGAGGAAATGAGAAGAAAGATATTGTAACAGAAGCAAGTAGCCGTAGTAGTTCAGAATCTAGCAAGCCGGTTGAGAAAGATCCCCCCAGTAAACAGGATTCTGTAGAACCAGGACCAGCCCTCAGCAAAGAGTGGGTAGTAGGTCAGCATCCGGTTCCTAATGCTCACTTGCAGGATCAGGAGGGCAAGACCCCAGCTTCTGAAGATGCTAAAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Musclin

Protein Analysis

268

Amino Acids

30.35

Weight (kDa)

8.8

Isoelectric Point (pI)

51.77

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007160)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80700 AT1G80980 AT1G80980
fragaria_vesca	FvH4_5g29190 FvH4_5g29190 FvH4_5g29190 FvH4_5g29190
malus_domestica	MD03G1160000.v1.1 MD17G1221100.v1.1
prunus_persica	Prupe.1G199000_v2.0.a1 Prupe.7G069400_v2.0.a1
pyrus_communis	pycom17g22550
rosa_chinensis	RchiOBHm_Chr7g0221831
rosa_laevigata	RLG00000002111
rosa_multiflora	Rmu_sc0005834.1_g000012 Rmu_sc0034732.1_g000001
rosa_roxburghii	Rroxscaffold_3G00237590 Rroxscaffold_3G00237660
rosa_rugosa	Rorug07G0204100 Rorug07G0204100
rosa_samantha	Rh7AG344900 Rh7BG335400 Rh7CG362300 Rh7DG342500
rosa_wichuraiana	Rw7G029230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	50
AciI	CCGC	1 cut(s)	380
AclWI	GGATC	2 cut(s)	659, 768
AcoI	YGGCCR	1 cut(s)	565
AcsI	RAATTY	2 cut(s)	16, 530
AcuI	CTGAAG	2 cut(s)	474, 545
AfaI	GTAC	1 cut(s)	297
AflII	CTTAAG	1 cut(s)	200
AgsI	TTSAA	3 cut(s)	73, 515, 542
AjnI	CCWGG	2 cut(s)	189, 694
AluBI	AGCT	3 cut(s)	217, 233, 782
AluI	AGCT	3 cut(s)	217, 233, 782
Alw26I	GTCTC	4 cut(s)	36, 91, 164, 493
AlwI	GGATC	2 cut(s)	659, 768
AlwNI	CAGNNNCTG	1 cut(s)	785
AoxI	GGCC	1 cut(s)	565
ApeKI	GCWGC	2 cut(s)	233, 449
ApoI	RAATTY	2 cut(s)	16, 530
Asp700I	GAANNNNTTC	1 cut(s)	68
AspS9I	GGNCC	2 cut(s)	254, 698
AvaII	GGWCC	2 cut(s)	254, 698
BaeI	ACNNNNGTAYC	2 cut(s)	287, 320
BalI	TGGCCA	1 cut(s)	567
BanII	GRGCYC	1 cut(s)	282
BbvCI	CCTCAGC	2 cut(s)	165, 707
BbvI	GCAGC	2 cut(s)	220, 436
BceAI	ACGGC	1 cut(s)	612
BciT130I	CCWGG	2 cut(s)	191, 696
BcoDI	GTCTC	4 cut(s)	36, 91, 164, 493
BfaI	CTAG	2 cut(s)	503, 645
BfmI	CTRYAG	1 cut(s)	687
BfrI	CTTAAG	1 cut(s)	200
BisI	GCNGC	2 cut(s)	234, 450
BlsI	GCNGC	2 cut(s)	235, 451
Bme1390I	CCNGG	2 cut(s)	191, 696
Bme18I	GGWCC	2 cut(s)	254, 698
BmgT120I	GGNCC	2 cut(s)	254, 698
BmiI	GGNNCC	2 cut(s)	117, 741
BmrFI	CCNGG	2 cut(s)	191, 696
BmrI	ACTGGG	1 cut(s)	666
BmsI	GCATC	2 cut(s)	742, 781
BmuI	ACTGGG	1 cut(s)	666
BpmI	CTGGAG	1 cut(s)	407
Bpu10I	CCTNAGC	2 cut(s)	165, 707
BsaI	GGTCTC	1 cut(s)	91
BsaJI	CCNNGG	4 cut(s)	48, 92, 111, 324
BsaWI	WCCGGW	1 cut(s)	736
Bse118I	RCCGGY	1 cut(s)	652
Bse1I	ACTGG	4 cut(s)	213, 256, 390, 672
Bse3DI	GCAATG	1 cut(s)	166
BseBI	CCWGG	2 cut(s)	191, 696
BseDI	CCNNGG	4 cut(s)	48, 92, 111, 324
BseGI	GGATG	1 cut(s)	733
BseMI	GCAATG	1 cut(s)	166
BseMII	CTCAG	3 cut(s)	156, 170, 721
BseNI	ACTGG	4 cut(s)	213, 256, 390, 672
BseRI	GAGGAG	2 cut(s)	20, 182
BseXI	GCAGC	2 cut(s)	220, 436
BseYI	CCCAGC	1 cut(s)	778
Bsh1285I	CGRYCG	1 cut(s)	24
BshFI	GGCC	1 cut(s)	567
BsiEI	CGRYCG	1 cut(s)	24
BsiSI	CCGG	2 cut(s)	653, 737
BsmAI	GTCTC	4 cut(s)	36, 91, 164, 493
BsnI	GGCC	1 cut(s)	567
Bso31I	GGTCTC	1 cut(s)	91
Bsp1286I	GDGCHC	1 cut(s)	282
Bsp143I	GATC	3 cut(s)	21, 664, 760
BspACI	CCGC	1 cut(s)	380
BspANI	GGCC	1 cut(s)	567
BspCNI	CTCAG	3 cut(s)	157, 171, 720
BspHI	TCATGA	1 cut(s)	225
BspLI	GGNNCC	2 cut(s)	117, 741
BspPI	GGATC	2 cut(s)	659, 768
BspTI	CTTAAG	1 cut(s)	200
BspTNI	GGTCTC	1 cut(s)	91
BsrDI	GCAATG	1 cut(s)	166
BsrFI	RCCGGY	1 cut(s)	652
BsrI	ACTGG	4 cut(s)	213, 256, 390, 672
BssAI	RCCGGY	1 cut(s)	652
BssECI	CCNNGG	4 cut(s)	48, 92, 111, 324
BssMI	GATC	3 cut(s)	21, 664, 760
BssT1I	CCWWGG	4 cut(s)	48, 92, 111, 324
Bst2UI	CCWGG	2 cut(s)	191, 696
Bst4CI	ACNGT	1 cut(s)	303
Bst6I	CTCTTC	1 cut(s)	251
BstAFI	CTTAAG	1 cut(s)	200
BstC8I	GCNNGC	3 cut(s)	317, 355, 650
BstDEI	CTNAG	3 cut(s)	165, 179, 707
BstF5I	GGATG	1 cut(s)	733
BstKTI	GATC	3 cut(s)	24, 667, 763
BstMAI	GTCTC	4 cut(s)	36, 91, 164, 493
BstMBI	GATC	3 cut(s)	21, 664, 760
BstMCI	CGRYCG	1 cut(s)	24
BstMWI	GCNNNNNNNGC	1 cut(s)	350
BstNI	CCWGG	2 cut(s)	191, 696
BstNSI	RCATGY	1 cut(s)	319
BstSCI	CCNGG	2 cut(s)	189, 694
BstSFI	CTRYAG	1 cut(s)	687
BstV1I	GCAGC	2 cut(s)	220, 436
BstX2I	RGATCY	1 cut(s)	664
BstXI	CCANNNNNNTGG	1 cut(s)	155
BstYI	RGATCY	1 cut(s)	664
BsuRI	GGCC	1 cut(s)	567
BtsCI	GGATG	1 cut(s)	733
BtsI	GCAGTG	1 cut(s)	160
BtsIMutI	CAGTG	2 cut(s)	160, 249
Cac8I	GCNNGC	3 cut(s)	317, 355, 650
CaiI	CAGNNNCTG	1 cut(s)	785
CciI	TCATGA	1 cut(s)	225
Cfr10I	RCCGGY	1 cut(s)	652
Cfr13I	GGNCC	2 cut(s)	254, 698
Csp6I	GTAC	1 cut(s)	296
CviAII	CATG	3 cut(s)	226, 316, 581
CviQI	GTAC	1 cut(s)	296
DdeI	CTNAG	3 cut(s)	165, 179, 707
DpnI	GATC	3 cut(s)	23, 666, 762
DpnII	GATC	3 cut(s)	21, 664, 760
DrdI	GACNNNNNNGTC	1 cut(s)	50
DseDI	GACNNNNNNGTC	1 cut(s)	50
EaeI	YGGCCR	1 cut(s)	565
Eam1104I	CTCTTC	1 cut(s)	251
EarI	CTCTTC	1 cut(s)	251
Eco130I	CCWWGG	4 cut(s)	48, 92, 111, 324
Eco24I	GRGCYC	1 cut(s)	282
Eco31I	GGTCTC	1 cut(s)	91
Eco47I	GGWCC	2 cut(s)	254, 698
Eco57I	CTGAAG	2 cut(s)	474, 545
EcoRI	GAATTC	1 cut(s)	16
EcoRII	CCWGG	2 cut(s)	189, 694
EcoT14I	CCWWGG	4 cut(s)	48, 92, 111, 324
EcoT38I	GRGCYC	1 cut(s)	282
ErhI	CCWWGG	4 cut(s)	48, 92, 111, 324
FaeI	CATG	3 cut(s)	229, 319, 584
FaiI	YATR	5 cut(s)	227, 317, 351, 360, 582
FalI	AAGNNNNNCTT	2 cut(s)	206, 238
FatI	CATG	3 cut(s)	225, 315, 580
Fnu4HI	GCNGC	2 cut(s)	234, 450
FokI	GGATG	1 cut(s)	720
FriOI	GRGCYC	1 cut(s)	282
Fsp4HI	GCNGC	2 cut(s)	234, 450
FspBI	CTAG	2 cut(s)	503, 645
GluI	GCNGC	2 cut(s)	234, 450
GsaI	CCCAGC	1 cut(s)	782
GsuI	CTGGAG	1 cut(s)	407
HaeIII	GGCC	1 cut(s)	567
HapII	CCGG	2 cut(s)	653, 737
Hin1II	CATG	3 cut(s)	229, 319, 584
HinfI	GANTC	5 cut(s)	57, 194, 542, 641, 683
HpaII	CCGG	2 cut(s)	653, 737
Hpy166II	GTNNAC	2 cut(s)	257, 677
Hpy188I	TCNGA	6 cut(s)	41, 56, 180, 525, 640, 787
Hpy188III	TCNNGA	4 cut(s)	61, 226, 476, 764
Hpy8I	GTNNAC	2 cut(s)	257, 677
HpyAV	CCTTC	4 cut(s)	270, 330, 520, 578
HpyCH4III	ACNGT	1 cut(s)	303
HpyCH4V	TGCA	3 cut(s)	236, 315, 757
HpyF10VI	GCNNNNNNNGC	1 cut(s)	350
HpyF3I	CTNAG	3 cut(s)	165, 179, 707
Hsp92II	CATG	3 cut(s)	229, 319, 584
Kzo9I	GATC	3 cut(s)	21, 664, 760
LmnI	GCTCC	3 cut(s)	113, 121, 388
Lsp1109I	GCAGC	2 cut(s)	220, 436
LweI	GCATC	2 cut(s)	742, 781
MaeI	CTAG	2 cut(s)	503, 645
MaeIII	GTNAC	1 cut(s)	610
MalI	GATC	3 cut(s)	23, 666, 762
MboI	GATC	3 cut(s)	21, 664, 760
MboII	GAAGA	9 cut(s)	238, 381, 412, 419, 422, 467, 527, 610, 800
MflI	RGATCY	1 cut(s)	664
MhlI	GDGCHC	1 cut(s)	282
MlsI	TGGCCA	1 cut(s)	567
MluCI	AATT	3 cut(s)	16, 363, 530
MluNI	TGGCCA	1 cut(s)	567
MlyI	GAGTC	2 cut(s)	51, 188
MnlI	CCTC	8 cut(s)	41, 160, 254, 478, 481, 581, 716, 760
Mox20I	TGGCCA	1 cut(s)	567
MroXI	GAANNNNTTC	1 cut(s)	68
MscI	TGGCCA	1 cut(s)	567
MseI	TTAA	1 cut(s)	201
Msp20I	TGGCCA	1 cut(s)	567
MspCI	CTTAAG	1 cut(s)	200
MspI	CCGG	2 cut(s)	653, 737
MspR9I	CCNGG	2 cut(s)	191, 696
MvaI	CCWGG	2 cut(s)	191, 696
MwoI	GCNNNNNNNGC	1 cut(s)	350
NdeII	GATC	3 cut(s)	21, 664, 760
NlaIII	CATG	3 cut(s)	229, 319, 584
NlaIV	GGNNCC	2 cut(s)	117, 741
NspI	RCATGY	1 cut(s)	319
PaeI	GCATGC	1 cut(s)	319
PagI	TCATGA	1 cut(s)	225
PdmI	GAANNNNTTC	1 cut(s)	68
PfeI	GAWTC	3 cut(s)	542, 641, 683
PkrI	GCNGC	2 cut(s)	235, 451
Ple19I	CGATCG	1 cut(s)	24
PleI	GAGTC	2 cut(s)	51, 188
PpsI	GAGTC	2 cut(s)	51, 188
Psp6I	CCWGG	2 cut(s)	189, 694
PspFI	CCCAGC	1 cut(s)	778
PspGI	CCWGG	2 cut(s)	189, 694
PspN4I	GGNNCC	2 cut(s)	117, 741
PspPI	GGNCC	2 cut(s)	254, 698
PstNI	CAGNNNCTG	1 cut(s)	785
PsuI	RGATCY	1 cut(s)	664
PvuI	CGATCG	1 cut(s)	24
RsaI	GTAC	1 cut(s)	297
RsaNI	GTAC	1 cut(s)	296
SaqAI	TTAA	1 cut(s)	201
SatI	GCNGC	2 cut(s)	234, 450
Sau3AI	GATC	3 cut(s)	21, 664, 760
Sau96I	GGNCC	2 cut(s)	254, 698
SchI	GAGTC	2 cut(s)	51, 188
ScrFI	CCNGG	2 cut(s)	191, 696
SduI	GDGCHC	1 cut(s)	282
SetI	ASST	7 cut(s)	50, 219, 235, 262, 492, 730, 784
SfaNI	GCATC	2 cut(s)	742, 781
SfcI	CTRYAG	1 cut(s)	687
SinI	GGWCC	2 cut(s)	254, 698
SmlI	CTYRAG	1 cut(s)	200
SmoI	CTYRAG	1 cut(s)	200
SphI	GCATGC	1 cut(s)	319
Sse9I	AATT	3 cut(s)	16, 363, 530
SsiI	CCGC	1 cut(s)	380
SspMI	CTAG	2 cut(s)	503, 645
StyD4I	CCNGG	2 cut(s)	189, 694
StyI	CCWWGG	4 cut(s)	48, 92, 111, 324
TaaI	ACNGT	1 cut(s)	303
TaqI	TCGA	3 cut(s)	20, 219, 282
TasI	AATT	3 cut(s)	16, 363, 530
TfiI	GAWTC	3 cut(s)	542, 641, 683
Tru1I	TTAA	1 cut(s)	201
Tru9I	TTAA	1 cut(s)	201
TscAI	CASTG	2 cut(s)	160, 256
TseI	GCWGC	2 cut(s)	233, 449
TspDTI	ATGAA	5 cut(s)	214, 242, 375, 572, 597
TspRI	CASTG	2 cut(s)	160, 256
Vha464I	CTTAAG	1 cut(s)	200
VpaK11BI	GGWCC	2 cut(s)	254, 698
XapI	RAATTY	2 cut(s)	16, 530
XceI	RCATGY	1 cut(s)	319
XmnI	GAANNNNTTC	1 cut(s)	68
XspI	CTAG	2 cut(s)	503, 645

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.