Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0002823

Physical Location & Seq

Genomic Coordinates Reverse (-)

11011533 .. 11012734

Gene Structure 1202 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G072600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 993 bp

ATGGACCTCAAGCTCTCCACCCTTCTCTGCTTGACCCTACTCTTCTCCACCATCCTAAACCCAGCTCTCTCCGAGCTCTGCAACCCGAAAGACAAGAAAGTCCTCCTACAAATCAAGAAAGCCTTCAACAACCCCTACGTCTTGTCCTCATGGGACCCAGAGACAGACTGCTGTGACTGGTACTCTGTCACCTGTGACTCCACCACAAACCGCGTCAACTCCCTCACCCTCTTCTCCGGGGGACTCTCCGGTCAAATTCCGACCCAAGTCGGTGACTTGCCGTATCTTGAAACACTTGAGTTTCACAAGCAACCCAATCTTACCGGACCAATCCAACCCTCCATTGCCAAGCTTAAGCGCCTCAAGGAGCTGCGCCTCAGCTGGACCAACATCTCCGGCTCTGTCCCTGACTTCCTCAGCCAACTCAAAAACCTCACCTTTCTTGAACTCTCATTCAATAACCTCACAGGCTCCATCCCCAGCTCGCTTTCTCAGCTTCCAAACCTAGACGCTCTTCATCTAGACCGTAACAAGCTCACAGGTCATATTCCGAAGTCATTCGGAGAATTCCATGGCAGTGTTCCAGACCTCTATCTCTCCCACAACCAGCTCTCAGGCAACATACCAACCTCATTAGCCAAACTGGACTTCAACCGCATAGACTTCTCCCGGAACAAGCTCGAAGGCGATGCATCCATGATCTTTGGATTGAACAAGACAACCCAGATTGTGGATCTGTCTAGGAACTTGCTGGAATTTAATCTGTCAAAGGTGGAGTTTTCCAAGAGCTTGATATCGTTGGATCTTAACCATAACAAGATCACAGGCGGAATTCCGGTGGGGCTGACCCAAGTGGATTTGCAGTTCCTGAACGTGAGCTACAACAGGTTGTGTGGTCAGATTCCAGTGGGCGGGAAGTTACAGAGCTTCGACTCCTCAACTTATTTCCATAACCGCTGCTTGTGTGGTGCTCCACTCCCAAGCTGCAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0004857 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005911 GO:0008150 GO:0009505 GO:0009506 GO:0012505 GO:0016020 GO:0030054 GO:0030234 GO:0030312 GO:0043086 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044092 GO:0044424 GO:0044444 GO:0044464 GO:0050790 GO:0055044 GO:0065007 GO:0065009 GO:0071944 GO:0090353 GO:0098772

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8

Protein Analysis

331

Amino Acids

36.56

Weight (kDa)

8.03

Isoelectric Point (pI)

33.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002823)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06860 AT5G06870
fragaria_vesca	FvH4_6g22790
malus_domestica	MD14G1062500.v1.1 MD14G1062600.v1.1
prunus_persica	Prupe.7G072600_v2.0.a1 Prupe.7G072700_v2.0.a1 Prupe.7G072700_v2.0.a1
pyrus_communis	pycom14g05040
rosa_chinensis	RchiOBHm_Chr3g0480401 RchiOBHm_Chr3g0480411
rosa_laevigata	RLG00000023478 RLG00000023480 RLG00000023484 RLG00000023486
rosa_multiflora	Rmu_sc0002205.1_g000006 Rmu_sc0002205.1_g000018 Rmu_sc0002205.1_g000023 Rmu_sc0003742.1_g000007 Rmu_sc0006555.1_g000004 Rmu_sc0010988.1_g000004
rosa_roxburghii	Rroxscaffold_6G00401380 Rroxscaffold_6G00401390 Rroxscaffold_6G00401400
rosa_rugosa	Rorug03G0183600.1 Rorug03G0183700
rosa_samantha	Rh3AG235100 Rh3AG235200 Rh3BG267800 Rh3BG268000 Rh3BG268100 Rh3CG265000 Rh3CG265200 Rh3DG260900 Rh3DG261100 Rh5BG519600 Rh5CG543500
rosa_wichuraiana	Rw3G021110 Rw5G046270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	98, 249
AccB7I	CCANNNNNTGG	1 cut(s)	730
AccII	CGCG	1 cut(s)	213
AciI	CCGC	5 cut(s)	211, 655, 828, 912, 955
AclWI	GGATC	2 cut(s)	741, 810
AcsI	RAATTY	4 cut(s)	255, 566, 755, 831
AfaI	GTAC	1 cut(s)	182
AfiI	CCNNNNNNNGG	2 cut(s)	730, 911
AflII	CTTAAG	1 cut(s)	353
AgsI	TTSAA	6 cut(s)	127, 290, 446, 457, 652, 712
AjuI	GAANNNNNNNTTGG	2 cut(s)	632, 664
AloI	GAACNNNNNNTCC	2 cut(s)	848, 880
Alw21I	GWGCWC	2 cut(s)	78, 973
Alw26I	GTCTC	1 cut(s)	155
AlwI	GGATC	2 cut(s)	741, 810
AlwNI	CAGNNNCTG	1 cut(s)	868
ApeKI	GCWGC	3 cut(s)	370, 957, 984
ApoI	RAATTY	4 cut(s)	255, 566, 755, 831
Asp700I	GAANNNNTTC	2 cut(s)	122, 557
AspLEI	GCGC	2 cut(s)	360, 375
AspS9I	GGNCC	4 cut(s)	4, 154, 326, 384
AsuC2I	CCSGG	2 cut(s)	238, 670
AsuHPI	GGTGA	4 cut(s)	181, 217, 284, 427
AvaII	GGWCC	4 cut(s)	4, 154, 326, 384
BanII	GRGCYC	1 cut(s)	78
Bbv12I	GWGCWC	2 cut(s)	78, 973
BbvCI	CCTCAGC	2 cut(s)	377, 416
BbvI	GCAGC	3 cut(s)	357, 944, 971
BccI	CCATC	2 cut(s)	59, 482
BceAI	ACGGC	1 cut(s)	265
BcgI	CGANNNNNNTGC	2 cut(s)	671, 705
BcnI	CCSGG	2 cut(s)	238, 670
BcoDI	GTCTC	1 cut(s)	155
BfaI	CTAG	3 cut(s)	506, 521, 741
BfoI	RGCGCY	1 cut(s)	361
BfrI	CTTAAG	1 cut(s)	353
BisI	GCNGC	3 cut(s)	371, 958, 985
BlsI	GCNGC	3 cut(s)	372, 959, 986
Bme1390I	CCNGG	2 cut(s)	238, 670
Bme18I	GGWCC	4 cut(s)	4, 154, 326, 384
BmgT120I	GGNCC	4 cut(s)	4, 154, 326, 384
BmiI	GGNNCC	3 cut(s)	155, 156, 472
BmrFI	CCNGG	2 cut(s)	238, 670
BmsI	GCATC	2 cut(s)	679, 701
BoxI	GACNNNNGTC	1 cut(s)	266
Bpu10I	CCTNAGC	2 cut(s)	377, 416
BpuEI	CTTGAG	2 cut(s)	317, 347
BpuMI	CCSGG	2 cut(s)	238, 670
BsaJI	CCNNGG	2 cut(s)	237, 571
BsaWI	WCCGGW	3 cut(s)	248, 323, 835
Bsc4I	CCNNNNNNNGG	2 cut(s)	730, 911
Bse1I	ACTGG	3 cut(s)	182, 648, 905
Bse3DI	GCAATG	1 cut(s)	342
BseDI	CCNNGG	2 cut(s)	237, 571
BseGI	GGATG	3 cut(s)	51, 474, 692
BseLI	CCNNNNNNNGG	2 cut(s)	730, 911
BseMI	GCAATG	1 cut(s)	342
BseMII	CTCAG	4 cut(s)	391, 430, 506, 627
BseNI	ACTGG	3 cut(s)	182, 648, 905
BseRI	GAGGAG	1 cut(s)	925
BseXI	GCAGC	3 cut(s)	357, 944, 971
BseYI	CCCAGC	2 cut(s)	61, 479
Bsh1236I	CGCG	1 cut(s)	213
BsiHKAI	GWGCWC	2 cut(s)	78, 973
BsiSI	CCGG	6 cut(s)	237, 249, 324, 396, 670, 836
BslFI	GGGAC	3 cut(s)	167, 255, 389
BslI	CCNNNNNNNGG	2 cut(s)	730, 911
BsmAI	GTCTC	1 cut(s)	155
BsmFI	GGGAC	3 cut(s)	167, 255, 389
Bsp1286I	GDGCHC	2 cut(s)	78, 973
Bsp143I	GATC	4 cut(s)	699, 733, 802, 819
Bsp19I	CCATGG	1 cut(s)	571
BspACI	CCGC	5 cut(s)	211, 655, 828, 912, 955
BspCNI	CTCAG	4 cut(s)	390, 429, 505, 626
BspFNI	CGCG	1 cut(s)	213
BspLI	GGNNCC	3 cut(s)	155, 156, 472
BspPI	GGATC	2 cut(s)	741, 810
BspQI	GCTCTTC	1 cut(s)	519
BspTI	CTTAAG	1 cut(s)	353
BsrDI	GCAATG	1 cut(s)	342
BsrI	ACTGG	3 cut(s)	182, 648, 905
BssECI	CCNNGG	2 cut(s)	237, 571
BssMI	GATC	4 cut(s)	699, 733, 802, 819
BssT1I	CCWWGG	1 cut(s)	571
Bst4CI	ACNGT	1 cut(s)	527
Bst6I	CTCTTC	3 cut(s)	47, 236, 519
BstAFI	CTTAAG	1 cut(s)	353
BstC8I	GCNNGC	1 cut(s)	485
BstDEI	CTNAG	4 cut(s)	377, 416, 492, 613
BstDSI	CCRYGG	1 cut(s)	571
BstF5I	GGATG	3 cut(s)	51, 474, 692
BstFNI	CGCG	1 cut(s)	213
BstH2I	RGCGCY	1 cut(s)	361
BstHHI	GCGC	2 cut(s)	360, 375
BstKTI	GATC	4 cut(s)	702, 736, 805, 822
BstMAI	GTCTC	1 cut(s)	155
BstMBI	GATC	4 cut(s)	699, 733, 802, 819
BstMWI	GCNNNNNNNGC	1 cut(s)	493
BstPAI	GACNNNNGTC	1 cut(s)	266
BstSCI	CCNGG	2 cut(s)	236, 668
BstUI	CGCG	1 cut(s)	213
BstV1I	GCAGC	3 cut(s)	357, 944, 971
BstX2I	RGATCY	2 cut(s)	733, 802
BstYI	RGATCY	2 cut(s)	733, 802
BtgI	CCRYGG	1 cut(s)	571
BtgZI	GCGATG	1 cut(s)	702
BtsCI	GGATG	3 cut(s)	51, 474, 692
BtsI	GCAGTG	1 cut(s)	583
BtsIMutI	CAGTG	2 cut(s)	583, 912
Cac8I	GCNNGC	1 cut(s)	485
CaiI	CAGNNNCTG	1 cut(s)	868
CfoI	GCGC	2 cut(s)	360, 375
Cfr13I	GGNCC	4 cut(s)	4, 154, 326, 384
CseI	GACGC	2 cut(s)	202, 518
Csp6I	GTAC	1 cut(s)	181
CviAII	CATG	3 cut(s)	150, 572, 697
CviQI	GTAC	1 cut(s)	181
DdeI	CTNAG	4 cut(s)	377, 416, 492, 613
DpnI	GATC	4 cut(s)	701, 735, 804, 821
DpnII	GATC	4 cut(s)	699, 733, 802, 819
DrdI	GACNNNNNNGTC	2 cut(s)	98, 249
DseDI	GACNNNNNNGTC	2 cut(s)	98, 249
Eam1104I	CTCTTC	3 cut(s)	47, 236, 519
EarI	CTCTTC	3 cut(s)	47, 236, 519
EciI	GGCGGA	1 cut(s)	843
Ecl136II	GAGCTC	1 cut(s)	76
Eco130I	CCWWGG	1 cut(s)	571
Eco24I	GRGCYC	1 cut(s)	78
Eco32I	GATATC	1 cut(s)	795
Eco47I	GGWCC	4 cut(s)	4, 154, 326, 384
Eco53kI	GAGCTC	1 cut(s)	76
EcoICRI	GAGCTC	1 cut(s)	76
EcoO109I	RGGNCCY	1 cut(s)	154
EcoRI	GAATTC	2 cut(s)	566, 831
EcoRV	GATATC	1 cut(s)	795
EcoT14I	CCWWGG	1 cut(s)	571
EcoT22I	ATGCAT	1 cut(s)	694
EcoT38I	GRGCYC	1 cut(s)	78
ErhI	CCWWGG	1 cut(s)	571
FaeI	CATG	3 cut(s)	153, 575, 700
FaiI	YATR	8 cut(s)	151, 546, 573, 623, 659, 698, 813, 951
FalI	AAGNNNNNCTT	2 cut(s)	107, 139
FaqI	GGGAC	3 cut(s)	167, 255, 389
FatI	CATG	3 cut(s)	149, 571, 696
FauI	CCCGC	1 cut(s)	905
Fnu4HI	GCNGC	3 cut(s)	371, 958, 985
FokI	GGATG	3 cut(s)	38, 461, 679
FriOI	GRGCYC	1 cut(s)	78
Fsp4HI	GCNGC	3 cut(s)	371, 958, 985
FspBI	CTAG	3 cut(s)	506, 521, 741
GlaI	GCGC	2 cut(s)	359, 374
GluI	GCNGC	3 cut(s)	371, 958, 985
GsaI	CCCAGC	2 cut(s)	65, 483
HaeII	RGCGCY	1 cut(s)	361
HapII	CCGG	6 cut(s)	237, 249, 324, 396, 670, 836
HgaI	GACGC	2 cut(s)	202, 518
HhaI	GCGC	2 cut(s)	360, 375
Hin1II	CATG	3 cut(s)	153, 575, 700
Hin6I	GCGC	2 cut(s)	358, 373
HinP1I	GCGC	2 cut(s)	358, 373
HincII	GTYRAC	1 cut(s)	217
HindII	GTYRAC	1 cut(s)	217
HindIII	AAGCTT	1 cut(s)	350
HinfI	GANTC	4 cut(s)	197, 243, 901, 932
HpaII	CCGG	6 cut(s)	237, 249, 324, 396, 670, 836
HphI	GGTGA	4 cut(s)	181, 217, 284, 427
Hpy166II	GTNNAC	1 cut(s)	217
Hpy188I	TCNGA	5 cut(s)	73, 261, 552, 563, 900
Hpy188III	TCNNGA	6 cut(s)	115, 287, 443, 521, 584, 868
Hpy8I	GTNNAC	1 cut(s)	217
HpyAV	CCTTC	3 cut(s)	32, 133, 677
HpyCH4III	ACNGT	1 cut(s)	527
HpyCH4IV	ACGT	2 cut(s)	138, 873
HpyCH4V	TGCA	4 cut(s)	81, 692, 862, 987
HpyF10VI	GCNNNNNNNGC	1 cut(s)	493
HpyF3I	CTNAG	4 cut(s)	377, 416, 492, 613
HpySE526I	ACGT	2 cut(s)	138, 873
Hsp92II	CATG	3 cut(s)	153, 575, 700
HspAI	GCGC	2 cut(s)	358, 373
KflI	GGGWCCC	1 cut(s)	154
Kzo9I	GATC	4 cut(s)	699, 733, 802, 819
LguI	GCTCTTC	1 cut(s)	519
LmnI	GCTCC	3 cut(s)	367, 476, 976
Lsp1109I	GCAGC	3 cut(s)	357, 944, 971
LweI	GCATC	2 cut(s)	679, 701
MaeI	CTAG	3 cut(s)	506, 521, 741
MaeII	ACGT	2 cut(s)	138, 873
MaeIII	GTNAC	6 cut(s)	173, 187, 194, 272, 527, 918
MalI	GATC	4 cut(s)	701, 735, 804, 821
MboI	GATC	4 cut(s)	699, 733, 802, 819
MboII	GAAGA	3 cut(s)	34, 223, 506
MflI	RGATCY	2 cut(s)	733, 802
MhlI	GDGCHC	2 cut(s)	78, 973
MluCI	AATT	4 cut(s)	255, 566, 755, 831
MlyI	GAGTC	3 cut(s)	191, 237, 926
MmeI	TCCRAC	3 cut(s)	284, 358, 780
Mph1103I	ATGCAT	1 cut(s)	694
MroXI	GAANNNNTTC	2 cut(s)	122, 557
MseI	TTAA	3 cut(s)	354, 759, 807
MslI	CAYNNNNRTG	1 cut(s)	576
MspA1I	CMGCKG	2 cut(s)	381, 957
MspCI	CTTAAG	1 cut(s)	353
MspI	CCGG	6 cut(s)	237, 249, 324, 396, 670, 836
MspR9I	CCNGG	2 cut(s)	238, 670
MvnI	CGCG	1 cut(s)	213
MwoI	GCNNNNNNNGC	1 cut(s)	493
NciI	CCSGG	2 cut(s)	238, 670
NcoI	CCATGG	1 cut(s)	571
NdeII	GATC	4 cut(s)	699, 733, 802, 819
NlaIII	CATG	3 cut(s)	153, 575, 700
NlaIV	GGNNCC	3 cut(s)	155, 156, 472
NmuCI	GTSAC	4 cut(s)	173, 187, 194, 272
NsiI	ATGCAT	1 cut(s)	694
PciSI	GCTCTTC	1 cut(s)	519
PdmI	GAANNNNTTC	2 cut(s)	122, 557
PfeI	GAWTC	1 cut(s)	901
PflMI	CCANNNNNTGG	1 cut(s)	730
PfoI	TCCNGGA	1 cut(s)	668
PkrI	GCNGC	3 cut(s)	372, 959, 986
PleI	GAGTC	3 cut(s)	191, 237, 926
PpsI	GAGTC	3 cut(s)	191, 237, 926
PpuMI	RGGWCCY	1 cut(s)	154
PshAI	GACNNNNGTC	1 cut(s)	266
Psp124BI	GAGCTC	1 cut(s)	78
Psp5II	RGGWCCY	1 cut(s)	154
PspFI	CCCAGC	2 cut(s)	61, 479
PspN4I	GGNNCC	3 cut(s)	155, 156, 472
PspPI	GGNCC	4 cut(s)	4, 154, 326, 384
PspPPI	RGGWCCY	1 cut(s)	154
PsrI	GAACNNNNNNTAC	2 cut(s)	863, 895
PstNI	CAGNNNCTG	1 cut(s)	868
PsuI	RGATCY	2 cut(s)	733, 802
PvuII	CAGCTG	1 cut(s)	381
RsaI	GTAC	1 cut(s)	182
RsaNI	GTAC	1 cut(s)	181
RseI	CAYNNNNRTG	1 cut(s)	576
SacI	GAGCTC	1 cut(s)	78
SapI	GCTCTTC	1 cut(s)	519
SaqAI	TTAA	3 cut(s)	354, 759, 807
SatI	GCNGC	3 cut(s)	371, 958, 985
Sau3AI	GATC	4 cut(s)	699, 733, 802, 819
Sau96I	GGNCC	4 cut(s)	4, 154, 326, 384
SchI	GAGTC	3 cut(s)	191, 237, 926
ScrFI	CCNGG	2 cut(s)	238, 670
SduI	GDGCHC	2 cut(s)	78, 973
SfaNI	GCATC	2 cut(s)	679, 701
SinI	GGWCC	4 cut(s)	4, 154, 326, 384
SmiMI	CAYNNNNRTG	1 cut(s)	576
SmlI	CTYRAG	4 cut(s)	8, 296, 353, 362
SmoI	CTYRAG	4 cut(s)	8, 296, 353, 362
Sse9I	AATT	4 cut(s)	255, 566, 755, 831
SsiI	CCGC	5 cut(s)	211, 655, 828, 912, 955
SspMI	CTAG	3 cut(s)	506, 521, 741
SstI	GAGCTC	1 cut(s)	78
StyD4I	CCNGG	2 cut(s)	236, 668
StyI	CCWWGG	1 cut(s)	571
TaaI	ACNGT	1 cut(s)	527
TaiI	ACGT	2 cut(s)	141, 876
TaqI	TCGA	2 cut(s)	681, 930
TasI	AATT	4 cut(s)	255, 566, 755, 831
TfiI	GAWTC	1 cut(s)	901
Tru1I	TTAA	3 cut(s)	354, 759, 807
Tru9I	TTAA	3 cut(s)	354, 759, 807
TscAI	CASTG	2 cut(s)	583, 912
TseFI	GTSAC	4 cut(s)	173, 187, 194, 272
TseI	GCWGC	3 cut(s)	370, 957, 984
Tsp45I	GTSAC	4 cut(s)	173, 187, 194, 272
TspDTI	ATGAA	1 cut(s)	506
TspRI	CASTG	2 cut(s)	583, 912
Van91I	CCANNNNNTGG	1 cut(s)	730
Vha464I	CTTAAG	1 cut(s)	353
VpaK11BI	GGWCC	4 cut(s)	4, 154, 326, 384
XapI	RAATTY	4 cut(s)	255, 566, 755, 831
XbaI	TCTAGA	1 cut(s)	520
XmnI	GAANNNNTTC	2 cut(s)	122, 557
XspI	CTAG	3 cut(s)	506, 521, 741
Zsp2I	ATGCAT	1 cut(s)	694

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.