Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0002823

Physical Location & Seq

Genomic Coordinates Reverse (-)

11031882 .. 11033142

Gene Structure 1261 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G072700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 993 bp

ATGGACCTCAAGCTCTCAACCCTCCTCTGCTTAACCCTACTCTTCTCCACCATCCTAAACCCAGCTCTCTCAGAGCTCTGCAACCCGAAAGACAAGAAAGTCCTCCTACAAATCAAGAAAGCCTTCAACAAGCCCTACATCTTGTCCTCGTGGAAACCAAAGAGAGACTGCTGTGACTGGTACTCTGTCACCTGTGACTCTACCACAAACCGCGTCAACTCCCTCACCCTCTTCTCCGGCGGACTCTCCGGTCAAATCCCGCCTCAAGTCGGAGACTTGCCATATCTTGAACTCCTTCAGTTCCACAAGCAACCCAATCTCACTGGCCCAATCCAACCCTCCATTGCAAAACTCAAGAGCCTCAAGTTACTGCGCCTCAGCTGGACCAACATCTCCGGCTCTGTCCCTGACTTCCTCAGCCAACTGAAGAACCTCACCTTTCTTGAACTCTCATTCAATAACCTCACAGGCTCCATCCCCAGCTCACTTTCTCAGCTTCCAAACCTAGAGGTTCTTCATCTAGACCGTAACAAGCTCACAGGTCCTATTCCAAAGTCATTCGGAGAATTCCAGGGCAGTTTTTCAGCTCTCTATCTCTCCCACAACCAGCTCTCAGGCAAGATACCAACCTCATTAGCGAAACTGGACGTCAGCACCATAGACTTCTCCCGGAACAAGCTCGAAGGTGATGCATCCATGCTCTTCGGATTGAACAAGACAACCCAGATTGTGGATCTGTCGAGGAACTTGCTGGAATTTGATCTGTCAAAGGTGAAGTTTTCGAAGAGCTTGACTTCCTTGGATCTCAACCATAACAAGATCGCAGGCAGTATTCCGGTGGGGCTGACCCAAGGGGATTTGCAGTACCTGAACGTGTGCTACAACAGGTTGTGTGGTCAGATTCCAGTGGGTGGGAAGTTGCAGAGCTTTGACTCCTCGACGTATTTCCATAACCGGTGCTTGTGCGGTGCTCCACTCCCAAGCTGCAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0004857 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005911 GO:0008150 GO:0009505 GO:0009506 GO:0012505 GO:0016020 GO:0030054 GO:0030234 GO:0030312 GO:0043086 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044092 GO:0044424 GO:0044444 GO:0044464 GO:0050790 GO:0055044 GO:0065007 GO:0065009 GO:0071944 GO:0090353 GO:0098772

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8

Protein Analysis

331

Amino Acids

36.43

Weight (kDa)

9.15

Isoelectric Point (pI)

34.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002823)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06860 AT5G06870
fragaria_vesca	FvH4_6g22790
malus_domestica	MD14G1062500.v1.1 MD14G1062600.v1.1
prunus_persica	Prupe.7G072600_v2.0.a1 Prupe.7G072700_v2.0.a1 Prupe.7G072700_v2.0.a1
pyrus_communis	pycom14g05040
rosa_chinensis	RchiOBHm_Chr3g0480401 RchiOBHm_Chr3g0480411
rosa_laevigata	RLG00000023478 RLG00000023480 RLG00000023484 RLG00000023486
rosa_multiflora	Rmu_sc0002205.1_g000006 Rmu_sc0002205.1_g000018 Rmu_sc0002205.1_g000023 Rmu_sc0003742.1_g000007 Rmu_sc0006555.1_g000004 Rmu_sc0010988.1_g000004
rosa_roxburghii	Rroxscaffold_6G00401380 Rroxscaffold_6G00401390 Rroxscaffold_6G00401400
rosa_rugosa	Rorug03G0183600.1 Rorug03G0183700
rosa_samantha	Rh3AG235100 Rh3AG235200 Rh3BG267800 Rh3BG268000 Rh3BG268100 Rh3CG265000 Rh3CG265200 Rh3DG260900 Rh3DG261100 Rh5BG519600 Rh5CG543500
rosa_wichuraiana	Rw3G021110 Rw5G046270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	98, 249
AatII	GACGTC	1 cut(s)	651
AccB7I	CCANNNNNTGG	2 cut(s)	730, 911
AccII	CGCG	1 cut(s)	213
AciI	CCGC	4 cut(s)	211, 240, 260, 966
AclWI	GGATC	2 cut(s)	741, 810
AcsI	RAATTY	2 cut(s)	566, 755
AcuI	CTGAAG	2 cut(s)	281, 446
AcyI	GRCGYC	1 cut(s)	648
AfaI	GTAC	2 cut(s)	182, 866
AfiI	CCNNNNNNNGG	3 cut(s)	269, 730, 911
AflIII	ACRYGT	1 cut(s)	873
AgeI	ACCGGT	1 cut(s)	954
AgsI	TTSAA	5 cut(s)	127, 290, 446, 457, 712
AjnI	CCWGG	1 cut(s)	570
Alw21I	GWGCWC	2 cut(s)	78, 973
Alw26I	GTCTC	2 cut(s)	159, 267
AlwI	GGATC	2 cut(s)	741, 810
AlwNI	CAGNNNCTG	1 cut(s)	868
AoxI	GGCC	1 cut(s)	325
ApeKI	GCWGC	1 cut(s)	984
ApoI	RAATTY	2 cut(s)	566, 755
AsiGI	ACCGGT	1 cut(s)	954
Asp700I	GAANNNNTTC	2 cut(s)	122, 294
AspLEI	GCGC	1 cut(s)	375
AspS9I	GGNCC	4 cut(s)	4, 326, 384, 542
AsuC2I	CCSGG	1 cut(s)	670
AsuHPI	GGTGA	5 cut(s)	181, 217, 427, 698, 784
AsuII	TTCGAA	1 cut(s)	782
AvaII	GGWCC	3 cut(s)	4, 384, 542
BanII	GRGCYC	1 cut(s)	78
BauI	CACGAG	1 cut(s)	148
Bbv12I	GWGCWC	2 cut(s)	78, 973
BbvCI	CCTCAGC	2 cut(s)	377, 416
BbvI	GCAGC	1 cut(s)	971
BccI	CCATC	2 cut(s)	59, 482
BcgI	CGANNNNNNTGC	4 cut(s)	671, 705, 730, 764
BciT130I	CCWGG	1 cut(s)	572
BcnI	CCSGG	1 cut(s)	670
BcoDI	GTCTC	2 cut(s)	159, 267
BfaI	CTAG	2 cut(s)	506, 521
BisI	GCNGC	1 cut(s)	985
BlsI	GCNGC	1 cut(s)	986
Bme1390I	CCNGG	2 cut(s)	572, 670
Bme18I	GGWCC	3 cut(s)	4, 384, 542
BmgT120I	GGNCC	4 cut(s)	4, 326, 384, 542
BmiI	GGNNCC	1 cut(s)	472
BmrFI	CCNGG	2 cut(s)	572, 670
BmsI	GCATC	2 cut(s)	679, 701
Bpu10I	CCTNAGC	2 cut(s)	377, 416
Bpu14I	TTCGAA	1 cut(s)	782
BpuEI	CTTGAG	3 cut(s)	249, 338, 347
BpuMI	CCSGG	1 cut(s)	670
BsaHI	GRCGYC	1 cut(s)	648
BsaJI	CCNNGG	3 cut(s)	571, 798, 850
BsaWI	WCCGGW	3 cut(s)	248, 835, 954
Bsc4I	CCNNNNNNNGG	3 cut(s)	269, 730, 911
Bse118I	RCCGGY	1 cut(s)	954
Bse1I	ACTGG	4 cut(s)	182, 328, 648, 905
Bse3DI	GCAATG	1 cut(s)	342
BseBI	CCWGG	1 cut(s)	572
BseDI	CCNNGG	3 cut(s)	571, 798, 850
BseGI	GGATG	3 cut(s)	51, 474, 692
BseLI	CCNNNNNNNGG	3 cut(s)	269, 730, 911
BseMI	GCAATG	1 cut(s)	342
BseMII	CTCAG	5 cut(s)	84, 391, 430, 506, 627
BseNI	ACTGG	4 cut(s)	182, 328, 648, 905
BseRI	GAGGAG	2 cut(s)	14, 925
BseXI	GCAGC	1 cut(s)	971
BseYI	CCCAGC	2 cut(s)	61, 479
Bsh1236I	CGCG	1 cut(s)	213
BshFI	GGCC	1 cut(s)	327
BshTI	ACCGGT	1 cut(s)	954
BsiHKAI	GWGCWC	2 cut(s)	78, 973
BsiSI	CCGG	6 cut(s)	237, 249, 396, 670, 836, 955
BslFI	GGGAC	1 cut(s)	389
BslI	CCNNNNNNNGG	3 cut(s)	269, 730, 911
BsmAI	GTCTC	2 cut(s)	159, 267
BsmFI	GGGAC	1 cut(s)	389
BsnI	GGCC	1 cut(s)	327
Bsp119I	TTCGAA	1 cut(s)	782
Bsp1286I	GDGCHC	2 cut(s)	78, 973
Bsp143I	GATC	4 cut(s)	733, 760, 802, 819
BspACI	CCGC	4 cut(s)	211, 240, 260, 966
BspANI	GGCC	1 cut(s)	327
BspCNI	CTCAG	5 cut(s)	83, 390, 429, 505, 626
BspFNI	CGCG	1 cut(s)	213
BspLI	GGNNCC	1 cut(s)	472
BspPI	GGATC	2 cut(s)	741, 810
BspQI	GCTCTTC	2 cut(s)	707, 779
BspT104I	TTCGAA	1 cut(s)	782
BsrDI	GCAATG	1 cut(s)	342
BsrFI	RCCGGY	1 cut(s)	954
BsrI	ACTGG	4 cut(s)	182, 328, 648, 905
BssAI	RCCGGY	1 cut(s)	954
BssECI	CCNNGG	3 cut(s)	571, 798, 850
BssMI	GATC	4 cut(s)	733, 760, 802, 819
BssNI	GRCGYC	1 cut(s)	648
BssSI	CACGAG	1 cut(s)	148
BssT1I	CCWWGG	2 cut(s)	798, 850
Bst2BI	CACGAG	1 cut(s)	148
Bst2UI	CCWGG	1 cut(s)	572
Bst4CI	ACNGT	1 cut(s)	527
Bst6I	CTCTTC	4 cut(s)	47, 236, 707, 779
BstACI	GRCGYC	1 cut(s)	648
BstBI	TTCGAA	1 cut(s)	782
BstC8I	GCNNGC	1 cut(s)	826
BstDEI	CTNAG	5 cut(s)	70, 377, 416, 492, 613
BstF5I	GGATG	3 cut(s)	51, 474, 692
BstFNI	CGCG	1 cut(s)	213
BstHHI	GCGC	1 cut(s)	375
BstKTI	GATC	4 cut(s)	736, 763, 805, 822
BstMAI	GTCTC	2 cut(s)	159, 267
BstMBI	GATC	4 cut(s)	733, 760, 802, 819
BstNI	CCWGG	1 cut(s)	572
BstSCI	CCNGG	2 cut(s)	570, 668
BstUI	CGCG	1 cut(s)	213
BstV1I	GCAGC	1 cut(s)	971
BstX2I	RGATCY	2 cut(s)	733, 802
BstYI	RGATCY	2 cut(s)	733, 802
BsuRI	GGCC	1 cut(s)	327
BtsCI	GGATG	3 cut(s)	51, 474, 692
BtsIMutI	CAGTG	2 cut(s)	321, 912
Cac8I	GCNNGC	1 cut(s)	826
CaiI	CAGNNNCTG	1 cut(s)	868
CfoI	GCGC	1 cut(s)	375
Cfr10I	RCCGGY	1 cut(s)	954
Cfr13I	GGNCC	4 cut(s)	4, 326, 384, 542
CseI	GACGC	1 cut(s)	202
Csp6I	GTAC	2 cut(s)	181, 865
CspAI	ACCGGT	1 cut(s)	954
CviAII	CATG	1 cut(s)	697
CviQI	GTAC	2 cut(s)	181, 865
DdeI	CTNAG	5 cut(s)	70, 377, 416, 492, 613
DpnI	GATC	4 cut(s)	735, 762, 804, 821
DpnII	GATC	4 cut(s)	733, 760, 802, 819
DrdI	GACNNNNNNGTC	2 cut(s)	98, 249
DseDI	GACNNNNNNGTC	2 cut(s)	98, 249
Eam1104I	CTCTTC	4 cut(s)	47, 236, 707, 779
EarI	CTCTTC	4 cut(s)	47, 236, 707, 779
EciI	GGCGGA	1 cut(s)	255
Ecl136II	GAGCTC	1 cut(s)	76
Eco130I	CCWWGG	2 cut(s)	798, 850
Eco24I	GRGCYC	1 cut(s)	78
Eco47I	GGWCC	3 cut(s)	4, 384, 542
Eco53kI	GAGCTC	1 cut(s)	76
Eco57I	CTGAAG	2 cut(s)	281, 446
EcoICRI	GAGCTC	1 cut(s)	76
EcoO109I	RGGNCCY	1 cut(s)	542
EcoRI	GAATTC	1 cut(s)	566
EcoRII	CCWGG	1 cut(s)	570
EcoT14I	CCWWGG	2 cut(s)	798, 850
EcoT22I	ATGCAT	1 cut(s)	694
EcoT38I	GRGCYC	1 cut(s)	78
ErhI	CCWWGG	2 cut(s)	798, 850
FaeI	CATG	1 cut(s)	700
FaiI	YATR	5 cut(s)	283, 659, 698, 813, 951
FalI	AAGNNNNNCTT	2 cut(s)	107, 139
FaqI	GGGAC	1 cut(s)	389
FatI	CATG	1 cut(s)	696
FauI	CCCGC	1 cut(s)	267
Fnu4HI	GCNGC	1 cut(s)	985
FokI	GGATG	3 cut(s)	38, 461, 679
FriOI	GRGCYC	1 cut(s)	78
Fsp4HI	GCNGC	1 cut(s)	985
FspBI	CTAG	2 cut(s)	506, 521
GlaI	GCGC	1 cut(s)	374
GluI	GCNGC	1 cut(s)	985
GsaI	CCCAGC	2 cut(s)	65, 483
HaeIII	GGCC	1 cut(s)	327
HapII	CCGG	6 cut(s)	237, 249, 396, 670, 836, 955
HgaI	GACGC	1 cut(s)	202
HhaI	GCGC	1 cut(s)	375
Hin1I	GRCGYC	1 cut(s)	648
Hin1II	CATG	1 cut(s)	700
Hin6I	GCGC	1 cut(s)	373
HinP1I	GCGC	1 cut(s)	373
HincII	GTYRAC	1 cut(s)	217
HindII	GTYRAC	1 cut(s)	217
HinfI	GANTC	4 cut(s)	197, 243, 901, 932
HpaII	CCGG	6 cut(s)	237, 249, 396, 670, 836, 955
HphI	GGTGA	5 cut(s)	181, 217, 427, 698, 784
Hpy166II	GTNNAC	1 cut(s)	217
Hpy188I	TCNGA	5 cut(s)	73, 272, 563, 707, 900
Hpy188III	TCNNGA	5 cut(s)	115, 287, 355, 443, 521
Hpy8I	GTNNAC	1 cut(s)	217
Hpy99I	CGWCG	1 cut(s)	943
HpyAV	CCTTC	3 cut(s)	133, 305, 677
HpyCH4III	ACNGT	1 cut(s)	527
HpyCH4IV	ACGT	3 cut(s)	648, 873, 941
HpyCH4V	TGCA	6 cut(s)	81, 347, 692, 862, 922, 987
HpyF3I	CTNAG	5 cut(s)	70, 377, 416, 492, 613
HpySE526I	ACGT	3 cut(s)	648, 873, 941
Hsp92I	GRCGYC	1 cut(s)	648
Hsp92II	CATG	1 cut(s)	700
HspAI	GCGC	1 cut(s)	373
Kzo9I	GATC	4 cut(s)	733, 760, 802, 819
LguI	GCTCTTC	2 cut(s)	707, 779
LmnI	GCTCC	2 cut(s)	476, 976
Lsp1109I	GCAGC	1 cut(s)	971
LweI	GCATC	2 cut(s)	679, 701
MaeI	CTAG	2 cut(s)	506, 521
MaeII	ACGT	3 cut(s)	648, 873, 941
MaeIII	GTNAC	5 cut(s)	173, 187, 194, 366, 527
MalI	GATC	4 cut(s)	735, 762, 804, 821
MboI	GATC	4 cut(s)	733, 760, 802, 819
MboII	GAAGA	6 cut(s)	34, 223, 439, 506, 694, 796
MflI	RGATCY	2 cut(s)	733, 802
MhlI	GDGCHC	2 cut(s)	78, 973
MluCI	AATT	2 cut(s)	566, 755
MlyI	GAGTC	3 cut(s)	191, 237, 926
MmeI	TCCRAC	2 cut(s)	250, 358
Mph1103I	ATGCAT	1 cut(s)	694
MroXI	GAANNNNTTC	2 cut(s)	122, 294
MseI	TTAA	1 cut(s)	32
MspA1I	CMGCKG	1 cut(s)	381
MspI	CCGG	6 cut(s)	237, 249, 396, 670, 836, 955
MspR9I	CCNGG	2 cut(s)	572, 670
MvaI	CCWGG	1 cut(s)	572
MvnI	CGCG	1 cut(s)	213
NciI	CCSGG	1 cut(s)	670
NdeII	GATC	4 cut(s)	733, 760, 802, 819
NlaIII	CATG	1 cut(s)	700
NlaIV	GGNNCC	1 cut(s)	472
NmuCI	GTSAC	3 cut(s)	173, 187, 194
NsiI	ATGCAT	1 cut(s)	694
NspV	TTCGAA	1 cut(s)	782
PciSI	GCTCTTC	2 cut(s)	707, 779
PdmI	GAANNNNTTC	2 cut(s)	122, 294
PfeI	GAWTC	1 cut(s)	901
PflMI	CCANNNNNTGG	2 cut(s)	730, 911
PfoI	TCCNGGA	1 cut(s)	668
PinAI	ACCGGT	1 cut(s)	954
PkrI	GCNGC	1 cut(s)	986
PleI	GAGTC	3 cut(s)	191, 237, 926
PpsI	GAGTC	3 cut(s)	191, 237, 926
PpuMI	RGGWCCY	1 cut(s)	542
Psp124BI	GAGCTC	1 cut(s)	78
Psp5II	RGGWCCY	1 cut(s)	542
Psp6I	CCWGG	1 cut(s)	570
PspFI	CCCAGC	2 cut(s)	61, 479
PspGI	CCWGG	1 cut(s)	570
PspN4I	GGNNCC	1 cut(s)	472
PspPI	GGNCC	4 cut(s)	4, 326, 384, 542
PspPPI	RGGWCCY	1 cut(s)	542
PsrI	GAACNNNNNNTAC	2 cut(s)	863, 895
PstNI	CAGNNNCTG	1 cut(s)	868
PsuI	RGATCY	2 cut(s)	733, 802
PvuII	CAGCTG	1 cut(s)	381
RsaI	GTAC	2 cut(s)	182, 866
RsaNI	GTAC	2 cut(s)	181, 865
SacI	GAGCTC	1 cut(s)	78
SapI	GCTCTTC	2 cut(s)	707, 779
SaqAI	TTAA	1 cut(s)	32
SatI	GCNGC	1 cut(s)	985
Sau3AI	GATC	4 cut(s)	733, 760, 802, 819
Sau96I	GGNCC	4 cut(s)	4, 326, 384, 542
SchI	GAGTC	3 cut(s)	191, 237, 926
ScrFI	CCNGG	2 cut(s)	572, 670
SduI	GDGCHC	2 cut(s)	78, 973
SfaNI	GCATC	2 cut(s)	679, 701
SfuI	TTCGAA	1 cut(s)	782
SinI	GGWCC	3 cut(s)	4, 384, 542
SmlI	CTYRAG	4 cut(s)	8, 264, 353, 362
SmoI	CTYRAG	4 cut(s)	8, 264, 353, 362
Sse9I	AATT	2 cut(s)	566, 755
SsiI	CCGC	4 cut(s)	211, 240, 260, 966
SspMI	CTAG	2 cut(s)	506, 521
SstI	GAGCTC	1 cut(s)	78
StyD4I	CCNGG	2 cut(s)	570, 668
StyI	CCWWGG	2 cut(s)	798, 850
TaaI	ACNGT	1 cut(s)	527
TaiI	ACGT	3 cut(s)	651, 876, 944
TaqI	TCGA	4 cut(s)	681, 740, 782, 938
TasI	AATT	2 cut(s)	566, 755
TfiI	GAWTC	1 cut(s)	901
Tru1I	TTAA	1 cut(s)	32
Tru9I	TTAA	1 cut(s)	32
TscAI	CASTG	2 cut(s)	328, 912
TseFI	GTSAC	3 cut(s)	173, 187, 194
TseI	GCWGC	1 cut(s)	984
Tsp45I	GTSAC	3 cut(s)	173, 187, 194
TspDTI	ATGAA	1 cut(s)	506
TspRI	CASTG	2 cut(s)	328, 912
Van91I	CCANNNNNTGG	2 cut(s)	730, 911
VpaK11BI	GGWCC	3 cut(s)	4, 384, 542
XapI	RAATTY	2 cut(s)	566, 755
XbaI	TCTAGA	1 cut(s)	520
XmnI	GAANNNNTTC	2 cut(s)	122, 294
XspI	CTAG	2 cut(s)	506, 521
ZraI	GACGTC	1 cut(s)	649
Zsp2I	ATGCAT	1 cut(s)	694

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.