Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0013027

Physical Location & Seq

Genomic Coordinates Reverse (-)

11312333 .. 11314507

Gene Structure 2175 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G076400.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 507 bp

ATGCAGTCTGGGAAGAACGTAAAGGGGTCCGTGAAAGAAACGGCTGCTAATGTAGCAGCCTCTGCTAAGTCTGGCATGGACAAGACCAAAGCCACAGTGCAAGAAAAGGTGGAGAAGATGACAGCTCATGACCCGGTTGAAAAGGACATGGCAACCCAAAAGAGGGAGGAGAGAATGGTGGAGGCCGAGCTGAACAAGTGTGCGGCGAAGGCACACAACGCCACGGCTAGACACGAGGCATCCGTGGGTGGGCCCACGGGGTACACAACAAGTGGCACTGGGACCCACACATACTCCCCAACCGGGGCCACAGGGCAGCCCACTGGGGCTCACCAAATGTCAGCGCTGCCCGGACATGGTACCGGGCAGCCCACGGGCCAGGTGACGGAGGGAGTAGTGGAATCGCACCCTATCGGGATCAACACAGGTACGGGTTGGACCGCAGCCCATAATACTCGTGTGGGTGGGAATCCACCCGGATATGGAACTGGTGGGACCTTCAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005543 GO:0008289 GO:0030246 GO:0031210 GO:0043167 GO:0043168 GO:0043169 GO:0048030 GO:0050997 GO:0070405 GO:0070492

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LEA_1

Protein Analysis

169

Amino Acids

17.11

Weight (kDa)

8.69

Isoelectric Point (pI)

19.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013027)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06760
fragaria_vesca	FvH4_6g22410
malus_domestica	MD12G1057800.v1.1
prunus_persica	Prupe.7G076400_v2.0.a1 Prupe.7G076400_v2.0.a1
pyrus_communis	pycom12g05130 pycom14g04720
rosa_chinensis	RchiOBHm_Chr3g0479771
rosa_laevigata	RLG00000023541
rosa_multiflora	Rmu_sc0004329.1_g000013
rosa_roxburghii	Rroxscaffold_6G00401990
rosa_rugosa	Rorug03G0178400
rosa_samantha	Rh3AG229100 Rh3BG262300 Rh3CG259000 Rh3DG255300
rosa_wichuraiana	Rw0G015300 Rw3G020610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	359
AccB1I	GGYRCC	1 cut(s)	359
AciI	CCGC	2 cut(s)	203, 441
AclWI	GGATC	1 cut(s)	425
AcuI	CTGAAG	1 cut(s)	484
AfaI	GTAC	3 cut(s)	263, 361, 430
AfeI	AGCGCT	1 cut(s)	345
AfiI	CCNNNNNNNGG	8 cut(s)	162, 163, 249, 303, 304, 356, 385, 482
AgsI	TTSAA	1 cut(s)	140
AjnI	CCWGG	1 cut(s)	378
AluBI	AGCT	2 cut(s)	125, 190
AluI	AGCT	2 cut(s)	125, 190
AlwI	GGATC	1 cut(s)	425
AlwNI	CAGNNNCTG	1 cut(s)	62
Aor51HI	AGCGCT	1 cut(s)	345
AoxI	GGCC	4 cut(s)	183, 251, 306, 376
ApaI	GGGCCC	1 cut(s)	255
ApeKI	GCWGC	6 cut(s)	44, 56, 316, 346, 367, 443
Asp718I	GGTACC	1 cut(s)	359
AspLEI	GCGC	1 cut(s)	346
AspS9I	GGNCC	8 cut(s)	27, 251, 252, 282, 306, 376, 438, 495
AsuC2I	CCSGG	5 cut(s)	134, 304, 351, 364, 477
AsuHPI	GGTGA	2 cut(s)	323, 394
AvaII	GGWCC	4 cut(s)	27, 282, 438, 495
BaeGI	GKGCMC	1 cut(s)	255
BanI	GGYRCC	1 cut(s)	359
BanII	GRGCYC	2 cut(s)	255, 331
BauI	CACGAG	2 cut(s)	233, 456
BbvI	GCAGC	6 cut(s)	31, 68, 328, 333, 379, 455
BceAI	ACGGC	2 cut(s)	57, 240
BciT130I	CCWGG	1 cut(s)	380
BcnI	CCSGG	5 cut(s)	134, 304, 351, 364, 477
BfaI	CTAG	1 cut(s)	228
BfoI	RGCGCY	1 cut(s)	347
BisI	GCNGC	7 cut(s)	45, 57, 204, 317, 347, 368, 444
BlsI	GCNGC	7 cut(s)	46, 58, 205, 318, 348, 369, 445
Bme1390I	CCNGG	6 cut(s)	134, 304, 351, 364, 380, 477
Bme18I	GGWCC	4 cut(s)	27, 282, 438, 495
BmgT120I	GGNCC	8 cut(s)	27, 251, 252, 282, 306, 376, 438, 495
BmiI	GGNNCC	7 cut(s)	28, 253, 283, 284, 307, 361, 496
BmrFI	CCNGG	6 cut(s)	134, 304, 351, 364, 380, 477
BmrI	ACTGGG	2 cut(s)	288, 333
BmsI	GCATC	1 cut(s)	248
BmuI	ACTGGG	2 cut(s)	288, 333
BpuMI	CCSGG	5 cut(s)	134, 304, 351, 364, 477
BsaJI	CCNNGG	5 cut(s)	222, 243, 255, 303, 372
BsaXI	ACNNNNNCTCC	2 cut(s)	278, 308
Bsc4I	CCNNNNNNNGG	8 cut(s)	162, 163, 249, 303, 304, 356, 385, 482
Bse1I	ACTGG	3 cut(s)	283, 328, 493
BseBI	CCWGG	1 cut(s)	380
BseDI	CCNNGG	5 cut(s)	222, 243, 255, 303, 372
BseGI	GGATG	1 cut(s)	239
BseLI	CCNNNNNNNGG	8 cut(s)	162, 163, 249, 303, 304, 356, 385, 482
BseNI	ACTGG	3 cut(s)	283, 328, 493
BseRI	GAGGAG	1 cut(s)	182
BseSI	GKGCMC	1 cut(s)	255
BseXI	GCAGC	6 cut(s)	31, 68, 328, 333, 379, 455
BshFI	GGCC	4 cut(s)	185, 253, 308, 378
BshNI	GGYRCC	1 cut(s)	359
BsiSI	CCGG	5 cut(s)	134, 303, 351, 363, 477
BslFI	GGGAC	1 cut(s)	295
BslI	CCNNNNNNNGG	8 cut(s)	162, 163, 249, 303, 304, 356, 385, 482
BsmFI	GGGAC	1 cut(s)	295
BsnI	GGCC	4 cut(s)	185, 253, 308, 378
Bsp120I	GGGCCC	1 cut(s)	251
Bsp1286I	GDGCHC	2 cut(s)	255, 331
Bsp143I	GATC	1 cut(s)	417
BspACI	CCGC	2 cut(s)	203, 441
BspANI	GGCC	4 cut(s)	185, 253, 308, 378
BspHI	TCATGA	1 cut(s)	127
BspLI	GGNNCC	7 cut(s)	28, 253, 283, 284, 307, 361, 496
BspPI	GGATC	1 cut(s)	425
BspT107I	GGYRCC	1 cut(s)	359
BsrI	ACTGG	3 cut(s)	283, 328, 493
BssECI	CCNNGG	5 cut(s)	222, 243, 255, 303, 372
BssMI	GATC	1 cut(s)	417
BssSI	CACGAG	2 cut(s)	233, 456
Bst2BI	CACGAG	2 cut(s)	233, 456
Bst2UI	CCWGG	1 cut(s)	380
Bst4CI	ACNGT	1 cut(s)	97
BstAPI	GCANNNNNTGC	1 cut(s)	62
BstDEI	CTNAG	1 cut(s)	66
BstDSI	CCRYGG	4 cut(s)	222, 243, 255, 372
BstF5I	GGATG	1 cut(s)	239
BstH2I	RGCGCY	1 cut(s)	347
BstHHI	GCGC	1 cut(s)	346
BstKTI	GATC	1 cut(s)	420
BstMBI	GATC	1 cut(s)	417
BstMWI	GCNNNNNNNGC	4 cut(s)	53, 62, 209, 218
BstNI	CCWGG	1 cut(s)	380
BstSCI	CCNGG	6 cut(s)	132, 302, 349, 362, 378, 475
BstSLI	GKGCMC	1 cut(s)	255
BstV1I	GCAGC	6 cut(s)	31, 68, 328, 333, 379, 455
BsuRI	GGCC	4 cut(s)	185, 253, 308, 378
BtgI	CCRYGG	4 cut(s)	222, 243, 255, 372
BtsCI	GGATG	1 cut(s)	239
BtsIMutI	CAGTG	3 cut(s)	102, 276, 321
CaiI	CAGNNNCTG	1 cut(s)	62
CciI	TCATGA	1 cut(s)	127
CfoI	GCGC	1 cut(s)	346
Cfr13I	GGNCC	8 cut(s)	27, 251, 252, 282, 306, 376, 438, 495
Csp6I	GTAC	3 cut(s)	262, 360, 429
CviAII	CATG	4 cut(s)	76, 128, 148, 356
CviQI	GTAC	3 cut(s)	262, 360, 429
DdeI	CTNAG	1 cut(s)	66
DpnI	GATC	1 cut(s)	419
DpnII	GATC	1 cut(s)	417
Eco24I	GRGCYC	2 cut(s)	255, 331
Eco47I	GGWCC	4 cut(s)	27, 282, 438, 495
Eco47III	AGCGCT	1 cut(s)	345
Eco57I	CTGAAG	1 cut(s)	484
EcoO109I	RGGNCCY	2 cut(s)	282, 495
EcoRII	CCWGG	1 cut(s)	378
EcoT38I	GRGCYC	2 cut(s)	255, 331
FaeI	CATG	4 cut(s)	79, 131, 151, 359
FaiI	YATR	7 cut(s)	77, 129, 149, 292, 357, 450, 483
FaqI	GGGAC	1 cut(s)	295
FatI	CATG	4 cut(s)	75, 127, 147, 355
Fnu4HI	GCNGC	7 cut(s)	45, 57, 204, 317, 347, 368, 444
FokI	GGATG	1 cut(s)	226
FriOI	GRGCYC	2 cut(s)	255, 331
Fsp4HI	GCNGC	7 cut(s)	45, 57, 204, 317, 347, 368, 444
FspBI	CTAG	1 cut(s)	228
GlaI	GCGC	1 cut(s)	345
GluI	GCNGC	7 cut(s)	45, 57, 204, 317, 347, 368, 444
HaeII	RGCGCY	1 cut(s)	347
HaeIII	GGCC	4 cut(s)	185, 253, 308, 378
HapII	CCGG	5 cut(s)	134, 303, 351, 363, 477
HhaI	GCGC	1 cut(s)	346
Hin1II	CATG	4 cut(s)	79, 131, 151, 359
Hin6I	GCGC	1 cut(s)	344
HinP1I	GCGC	1 cut(s)	344
HinfI	GANTC	2 cut(s)	401, 469
HpaII	CCGG	5 cut(s)	134, 303, 351, 363, 477
HphI	GGTGA	2 cut(s)	323, 394
Hpy166II	GTNNAC	1 cut(s)	264
Hpy188III	TCNNGA	2 cut(s)	128, 415
Hpy8I	GTNNAC	1 cut(s)	264
HpyAV	CCTTC	1 cut(s)	202
HpyCH4III	ACNGT	1 cut(s)	97
HpyCH4IV	ACGT	1 cut(s)	18
HpyCH4V	TGCA	2 cut(s)	4, 100
HpyF10VI	GCNNNNNNNGC	4 cut(s)	53, 62, 209, 218
HpyF3I	CTNAG	1 cut(s)	66
HpySE526I	ACGT	1 cut(s)	18
Hsp92II	CATG	4 cut(s)	79, 131, 151, 359
HspAI	GCGC	1 cut(s)	344
KflI	GGGWCCC	1 cut(s)	282
KpnI	GGTACC	1 cut(s)	363
Kzo9I	GATC	1 cut(s)	417
Lsp1109I	GCAGC	6 cut(s)	31, 68, 328, 333, 379, 455
LweI	GCATC	1 cut(s)	248
MaeI	CTAG	1 cut(s)	228
MaeII	ACGT	1 cut(s)	18
MaeIII	GTNAC	1 cut(s)	382
MalI	GATC	1 cut(s)	419
MboI	GATC	1 cut(s)	417
MboII	GAAGA	2 cut(s)	25, 127
MhlI	GDGCHC	2 cut(s)	255, 331
MmeI	TCCRAC	1 cut(s)	416
MnlI	CCTC	6 cut(s)	70, 156, 160, 175, 229, 382
MspI	CCGG	5 cut(s)	134, 303, 351, 363, 477
MspR9I	CCNGG	6 cut(s)	134, 304, 351, 364, 380, 477
MvaI	CCWGG	1 cut(s)	380
MwoI	GCNNNNNNNGC	4 cut(s)	53, 62, 209, 218
NciI	CCSGG	5 cut(s)	134, 304, 351, 364, 477
NdeII	GATC	1 cut(s)	417
NlaIII	CATG	4 cut(s)	79, 131, 151, 359
NlaIV	GGNNCC	7 cut(s)	28, 253, 283, 284, 307, 361, 496
NmeAIII	GCCGAG	1 cut(s)	211
NmuCI	GTSAC	1 cut(s)	382
PagI	TCATGA	1 cut(s)	127
PcsI	WCGNNNNNNNCGW	1 cut(s)	240
PfeI	GAWTC	2 cut(s)	401, 469
PkrI	GCNGC	7 cut(s)	46, 58, 205, 318, 348, 369, 445
PpuMI	RGGWCCY	2 cut(s)	282, 495
Psp5II	RGGWCCY	2 cut(s)	282, 495
Psp6I	CCWGG	1 cut(s)	378
PspGI	CCWGG	1 cut(s)	378
PspN4I	GGNNCC	7 cut(s)	28, 253, 283, 284, 307, 361, 496
PspOMI	GGGCCC	1 cut(s)	251
PspPI	GGNCC	8 cut(s)	27, 251, 252, 282, 306, 376, 438, 495
PspPPI	RGGWCCY	2 cut(s)	282, 495
PstNI	CAGNNNCTG	1 cut(s)	62
RsaI	GTAC	3 cut(s)	263, 361, 430
RsaNI	GTAC	3 cut(s)	262, 360, 429
SatI	GCNGC	7 cut(s)	45, 57, 204, 317, 347, 368, 444
Sau3AI	GATC	1 cut(s)	417
Sau96I	GGNCC	8 cut(s)	27, 251, 252, 282, 306, 376, 438, 495
ScrFI	CCNGG	6 cut(s)	134, 304, 351, 364, 380, 477
SduI	GDGCHC	2 cut(s)	255, 331
SetI	ASST	7 cut(s)	21, 111, 127, 192, 384, 430, 500
SfaNI	GCATC	1 cut(s)	248
SinI	GGWCC	4 cut(s)	27, 282, 438, 495
SsiI	CCGC	2 cut(s)	203, 441
SspMI	CTAG	1 cut(s)	228
StyD4I	CCNGG	6 cut(s)	132, 302, 349, 362, 378, 475
TaaI	ACNGT	1 cut(s)	97
TaiI	ACGT	1 cut(s)	21
TauI	GCSGC	1 cut(s)	206
TfiI	GAWTC	2 cut(s)	401, 469
TscAI	CASTG	3 cut(s)	102, 283, 328
TseFI	GTSAC	1 cut(s)	382
TseI	GCWGC	6 cut(s)	44, 56, 316, 346, 367, 443
Tsp45I	GTSAC	1 cut(s)	382
TspGWI	ACGGA	3 cut(s)	19, 232, 401
TspRI	CASTG	3 cut(s)	102, 283, 328
VpaK11BI	GGWCC	4 cut(s)	27, 282, 438, 495
XspI	CTAG	1 cut(s)	228

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.